BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0251c
Length=159
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607392|ref|NP_214765.1| heat shock protein hsp (heat-stress... 321 3e-86
gi|339630328|ref|YP_004721970.1| heat shock protein Hsp [Mycobac... 318 1e-85
gi|340625289|ref|YP_004743741.1| heat shock protein HSP [Mycobac... 318 2e-85
gi|254233629|ref|ZP_04926955.1| heat shock protein hsp (heat-str... 317 4e-85
gi|118616895|ref|YP_905227.1| heat shock protein Hsp [Mycobacter... 237 4e-61
gi|183980543|ref|YP_001848834.1| heat shock protein Hsp [Mycobac... 236 1e-60
gi|240168475|ref|ZP_04747134.1| Hsp20/alpha crystallin family pr... 228 2e-58
gi|296167533|ref|ZP_06849885.1| heat shock protein Hsp20 [Mycoba... 222 2e-56
gi|254820417|ref|ZP_05225418.1| Hsp20/alpha crystallin family pr... 221 2e-56
gi|342859272|ref|ZP_08715926.1| Hsp20/alpha crystallin family pr... 221 4e-56
gi|308375106|ref|ZP_07667945.1| heat shock protein hsp [Mycobact... 218 3e-55
gi|41409799|ref|NP_962635.1| Hsp [Mycobacterium avium subsp. par... 214 3e-54
gi|254777345|ref|ZP_05218861.1| Hsp20/alpha crystallin family pr... 214 5e-54
gi|333988878|ref|YP_004521492.1| heat shock protein Hsp [Mycobac... 192 2e-47
gi|126432860|ref|YP_001068551.1| heat shock protein Hsp20 [Mycob... 191 4e-47
gi|108797237|ref|YP_637434.1| heat shock protein Hsp20 [Mycobact... 190 6e-47
gi|120401322|ref|YP_951151.1| heat shock protein Hsp20 [Mycobact... 179 2e-43
gi|118472842|ref|YP_884837.1| Hsp20/alpha crystallin family prot... 170 8e-41
gi|145220992|ref|YP_001131670.1| heat shock protein Hsp20 [Mycob... 162 2e-38
gi|296395008|ref|YP_003659892.1| heat shock protein Hsp20 [Segni... 147 6e-34
gi|317508919|ref|ZP_07966556.1| hsp20-like protein [Segniliparus... 142 2e-32
gi|169631477|ref|YP_001705126.1| heat shock protein Hsp20 [Mycob... 133 1e-29
gi|229822217|ref|YP_002883743.1| heat shock protein Hsp20 [Beute... 125 2e-27
gi|152964276|ref|YP_001360060.1| heat shock protein Hsp20 [Kineo... 122 1e-26
gi|311743147|ref|ZP_07716955.1| heat shock protein Hsp20 [Aeromi... 106 1e-21
gi|134096767|ref|YP_001102428.1| heat shock protein HSP20 [Sacch... 99.4 1e-19
gi|336177519|ref|YP_004582894.1| heat shock protein Hsp20 [Frank... 99.0 2e-19
gi|158317047|ref|YP_001509555.1| heat shock protein Hsp20 [Frank... 98.6 3e-19
gi|86739887|ref|YP_480287.1| heat shock protein Hsp20 [Frankia s... 96.3 1e-18
gi|312198906|ref|YP_004018967.1| heat shock protein Hsp20 [Frank... 95.5 2e-18
gi|288920811|ref|ZP_06415109.1| heat shock protein Hsp20 [Franki... 89.7 1e-16
gi|111221322|ref|YP_712116.1| putative small heat shock protein ... 84.7 4e-15
gi|196231663|ref|ZP_03130520.1| heat shock protein Hsp20 [Chthon... 74.7 4e-12
gi|269127022|ref|YP_003300392.1| heat shock protein Hsp20 [Therm... 73.2 1e-11
gi|26990030|ref|NP_745455.1| heat shock protein, [Pseudomonas pu... 70.5 9e-11
gi|257056297|ref|YP_003134129.1| molecular chaperone (small heat... 70.1 1e-10
gi|78043114|ref|YP_361216.1| hsp20/alpha crystallin family prote... 69.7 1e-10
gi|284097577|ref|ZP_06385635.1| heat shock protein Hsp20 [Candid... 69.3 2e-10
gi|10802712|gb|AAG23578.1|AF244629_1 small heat-shock protein [C... 68.9 2e-10
gi|255292053|dbj|BAH90534.1| heat shock protein [uncultured bact... 68.6 3e-10
gi|124004464|ref|ZP_01689309.1| small heat shock protein [Micros... 67.8 6e-10
gi|320109103|ref|YP_004184693.1| heat shock protein Hsp20 [Terri... 66.6 1e-09
gi|301059485|ref|ZP_07200398.1| Hsp20/alpha crystallin family pr... 66.6 1e-09
gi|16329588|ref|NP_440316.1| chaperone [Synechocystis sp. PCC 68... 66.2 1e-09
gi|146282582|ref|YP_001172735.1| HSP20 family protein [Pseudomon... 66.2 1e-09
gi|339494195|ref|YP_004714488.1| HSP20 family protein [Pseudomon... 66.2 2e-09
gi|57234242|ref|YP_181679.1| Hsp20/alpha crystallin family prote... 65.9 2e-09
gi|334119369|ref|ZP_08493455.1| heat shock protein Hsp20 [Microc... 65.9 2e-09
gi|296444975|ref|ZP_06886937.1| heat shock protein Hsp20 [Methyl... 65.9 2e-09
gi|282899469|ref|ZP_06307435.1| Heat shock protein Hsp20 [Cylind... 65.9 2e-09
>gi|15607392|ref|NP_214765.1| heat shock protein hsp (heat-stress-induced ribosome-binding
protein A) [Mycobacterium tuberculosis H37Rv]
gi|15839632|ref|NP_334669.1| HSP20 family protein [Mycobacterium tuberculosis CDC1551]
gi|31791429|ref|NP_853922.1| heat shock protein hsp (heat-stress-induced ribosome-binding
protein A) [Mycobacterium bovis AF2122/97]
72 more sequence titles
Length=159
Score = 321 bits (822), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL
Sbjct 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
Query 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA
Sbjct 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
Query 121 HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK 159
HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK
Sbjct 121 HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK 159
>gi|339630328|ref|YP_004721970.1| heat shock protein Hsp [Mycobacterium africanum GM041182]
gi|339329684|emb|CCC25324.1| heat shock protein Hsp (heat-stress-induced ribosome-binding
protein A) [Mycobacterium africanum GM041182]
Length=159
Score = 318 bits (816), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/159 (99%), Positives = 158/159 (99%), Gaps = 0/159 (0%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL
Sbjct 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
Query 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA
Sbjct 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
Query 121 HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK 159
HVTSEAIAASY AGVLTVRVAGAYKAPAETQAQRIAITK
Sbjct 121 HVTSEAIAASYAAGVLTVRVAGAYKAPAETQAQRIAITK 159
>gi|340625289|ref|YP_004743741.1| heat shock protein HSP [Mycobacterium canettii CIPT 140010059]
gi|340003479|emb|CCC42599.1| heat shock protein HSP (heat-stress-induced ribosome-binding
protein A) [Mycobacterium canettii CIPT 140010059]
Length=159
Score = 318 bits (815), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/159 (99%), Positives = 158/159 (99%), Gaps = 0/159 (0%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL
Sbjct 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
Query 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA
Sbjct 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
Query 121 HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK 159
HVTSEAIAASYDAGVLTVRVAGAYK PAETQAQRIAITK
Sbjct 121 HVTSEAIAASYDAGVLTVRVAGAYKDPAETQAQRIAITK 159
>gi|254233629|ref|ZP_04926955.1| heat shock protein hsp (heat-stress-induced ribosome-binding
protein A) [Mycobacterium tuberculosis C]
gi|124603422|gb|EAY61697.1| heat shock protein hsp (heat-stress-induced ribosome-binding
protein A) [Mycobacterium tuberculosis C]
Length=159
Score = 317 bits (811), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 158/159 (99%), Positives = 158/159 (99%), Gaps = 0/159 (0%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL
Sbjct 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
Query 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSF LPA
Sbjct 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFWLPA 120
Query 121 HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK 159
HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK
Sbjct 121 HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK 159
>gi|118616895|ref|YP_905227.1| heat shock protein Hsp [Mycobacterium ulcerans Agy99]
gi|118569005|gb|ABL03756.1| heat shock protein Hsp [Mycobacterium ulcerans Agy99]
Length=152
Score = 237 bits (605), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 117/159 (74%), Positives = 135/159 (85%), Gaps = 7/159 (4%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
M+NLALWSRP W DRWLRDFFGPAA +DWY+P+A F PAAEIVKDGDDAVVRLEL
Sbjct 1 MSNLALWSRPAWST---DRWLRDFFGPAAASDWYKPLATGFNPAAEIVKDGDDAVVRLEL 57
Query 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
PG+DV+ DVNVE++ G+ LVIRGEHRDEH Q+AG+ + RTLREIRYGSFRRSF+LP
Sbjct 58 PGVDVENDVNVEVERGE----LVIRGEHRDEHAQEAGEANRRTLREIRYGSFRRSFQLPE 113
Query 121 HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK 159
HVTSEA++ASYDAGVLTVRV GAY+ PA ++ QRIAITK
Sbjct 114 HVTSEAVSASYDAGVLTVRVQGAYRDPAASEPQRIAITK 152
>gi|183980543|ref|YP_001848834.1| heat shock protein Hsp [Mycobacterium marinum M]
gi|183173869|gb|ACC38979.1| heat shock protein Hsp [Mycobacterium marinum M]
Length=152
Score = 236 bits (601), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/159 (74%), Positives = 134/159 (85%), Gaps = 7/159 (4%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
M+NLALWSRP W DRWLRDFFGPAA +DWY+P+ F PAAEIVKDGDDAVVRLEL
Sbjct 1 MSNLALWSRPAWST---DRWLRDFFGPAAASDWYKPLDTGFNPAAEIVKDGDDAVVRLEL 57
Query 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
PG+DV+ DVNVE++ G+ LVIRGEHRDEH Q+AG+ D RTLREIRYGSFRRSF+LP
Sbjct 58 PGVDVENDVNVEVERGE----LVIRGEHRDEHAQEAGEADRRTLREIRYGSFRRSFQLPE 113
Query 121 HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK 159
HVTSEA++ASYDAGVLTVRV GAY+ PA ++ QRIAITK
Sbjct 114 HVTSEAVSASYDAGVLTVRVQGAYRDPAASEPQRIAITK 152
>gi|240168475|ref|ZP_04747134.1| Hsp20/alpha crystallin family protein [Mycobacterium kansasii
ATCC 12478]
Length=153
Score = 228 bits (581), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/159 (74%), Positives = 130/159 (82%), Gaps = 6/159 (3%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
M+NLALWSRP W DR LRDFFGPAA TDWY+P G+F+PAAEIV+DGDDA+VRLEL
Sbjct 1 MSNLALWSRPAWGTWDPDRLLRDFFGPAAATDWYKPATGEFSPAAEIVRDGDDALVRLEL 60
Query 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
PG+DVD DVNVE+D VSRLVI GEHRDEH ++A DGR L+EIRYGSFRRSFRLPA
Sbjct 61 PGVDVDNDVNVEVDVRNGVSRLVIHGEHRDEHAENA---DGRVLKEIRYGSFRRSFRLPA 117
Query 121 HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK 159
VTSEA+ ASYDAG+LTVRV GAY A QAQRIAITK
Sbjct 118 QVTSEAVTASYDAGILTVRVNGAY---AGNQAQRIAITK 153
>gi|296167533|ref|ZP_06849885.1| heat shock protein Hsp20 [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897155|gb|EFG76764.1| heat shock protein Hsp20 [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=149
Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/159 (72%), Positives = 130/159 (82%), Gaps = 10/159 (6%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
M+NLALWSRP WD DRWLRDFFGPAA TDW +P F PAAE+VKDGDDA+VR+EL
Sbjct 1 MSNLALWSRPAWDT---DRWLRDFFGPAAATDWVKPTTTGFNPAAEVVKDGDDAIVRVEL 57
Query 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
PG+DV+KDVNVE+D G RLVI GEHRD++ QD G+ GRTLREIRYG+FRRSF+LPA
Sbjct 58 PGVDVEKDVNVEVDRG----RLVIHGEHRDQYAQDDGEGVGRTLREIRYGAFRRSFQLPA 113
Query 121 HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK 159
HVT +AI ASYDAGVLTVRV GAY A ++AQRIAITK
Sbjct 114 HVTGDAITASYDAGVLTVRVTGAY---AGSRAQRIAITK 149
>gi|254820417|ref|ZP_05225418.1| Hsp20/alpha crystallin family protein [Mycobacterium intracellulare
ATCC 13950]
Length=146
Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/159 (75%), Positives = 130/159 (82%), Gaps = 13/159 (8%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
M+NLALWSRP WD DRWLRDFFGPAA DW PV+ + PAAEIVKDGDDAVVR+EL
Sbjct 1 MSNLALWSRPAWDT---DRWLRDFFGPAAAADWNNPVSSGWRPAAEIVKDGDDAVVRVEL 57
Query 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
PG+DVD+DVNVE+D G RLVI GEHRDEH + +KDGRTLREIRYGSFRRSF+LPA
Sbjct 58 PGVDVDRDVNVEVDRG----RLVIHGEHRDEHAE---EKDGRTLREIRYGSFRRSFQLPA 110
Query 121 HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK 159
HVT +AI ASYDAGVLTVRV+GAY A QAQRIAITK
Sbjct 111 HVTGDAITASYDAGVLTVRVSGAY---AGNQAQRIAITK 146
>gi|342859272|ref|ZP_08715926.1| Hsp20/alpha crystallin family protein [Mycobacterium colombiense
CECT 3035]
gi|342133513|gb|EGT86716.1| Hsp20/alpha crystallin family protein [Mycobacterium colombiense
CECT 3035]
Length=149
Score = 221 bits (562), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/159 (72%), Positives = 127/159 (80%), Gaps = 10/159 (6%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
M+NLALWSRP WD DRWLRDFFGPAA DW P F PAAEIVKDGDDA+VR+EL
Sbjct 1 MSNLALWSRPAWDT---DRWLRDFFGPAAAADWNTPATSGFKPAAEIVKDGDDAIVRVEL 57
Query 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
PG+DVD+DVNVE+D G RLVI GEHRD+ Q+ K+GRTLREIRYGSFRRSF+LP
Sbjct 58 PGVDVDQDVNVEVDRG----RLVIHGEHRDQRAQE---KEGRTLREIRYGSFRRSFQLPT 110
Query 121 HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK 159
HVT +AI A+YDAGVLTVRVAGA K PA +QAQRI ITK
Sbjct 111 HVTGDAITATYDAGVLTVRVAGALKDPAGSQAQRIEITK 149
>gi|308375106|ref|ZP_07667945.1| heat shock protein hsp [Mycobacterium tuberculosis SUMu007]
gi|308347500|gb|EFP36351.1| heat shock protein hsp [Mycobacterium tuberculosis SUMu007]
Length=136
Score = 218 bits (554), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%)
Query 52 DDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGS 111
DDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGS
Sbjct 29 DDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGS 88
Query 112 FRRSFRLPAHVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK 159
FRRSFRLPAHVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK
Sbjct 89 FRRSFRLPAHVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK 136
>gi|41409799|ref|NP_962635.1| Hsp [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118466755|ref|YP_884027.1| Hsp20/alpha crystallin family protein [Mycobacterium avium 104]
gi|41398631|gb|AAS06251.1| Hsp [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118168042|gb|ABK68939.1| Hsp20/alpha crystallin family protein [Mycobacterium avium 104]
gi|336460115|gb|EGO39021.1| molecular chaperone (small heat shock protein) [Mycobacterium
avium subsp. paratuberculosis S397]
Length=146
Score = 214 bits (546), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/159 (72%), Positives = 125/159 (79%), Gaps = 13/159 (8%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
M+NLALW+RP WD DRWLRDFFGPAA DW +P F PAAEIVKDGDDA+VR+EL
Sbjct 1 MSNLALWTRPAWDT---DRWLRDFFGPAAAADWNKPATSAFKPAAEIVKDGDDAIVRVEL 57
Query 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
PG+DVD+DV VELD G RLVIRGEHRDEH + +KDGRTLREIRYGSF RSF+LP
Sbjct 58 PGVDVDQDVQVELDRG----RLVIRGEHRDEHAE---EKDGRTLREIRYGSFHRSFQLPG 110
Query 121 HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK 159
HVT + I ASYDAGVLTVRV GAY A QA+RIAITK
Sbjct 111 HVTDDDITASYDAGVLTVRVTGAY---AGNQAKRIAITK 146
>gi|254777345|ref|ZP_05218861.1| Hsp20/alpha crystallin family protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length=146
Score = 214 bits (544), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 112/159 (71%), Positives = 125/159 (79%), Gaps = 13/159 (8%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
M+NLALW+RP WD DRWLRDFFGPAA DW +P F PAAEIVKDGDDA+VR+EL
Sbjct 1 MSNLALWTRPAWDT---DRWLRDFFGPAAAADWNKPATSAFKPAAEIVKDGDDAIVRVEL 57
Query 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
PG+DVD+DV VELD G RLVIRGEHRDEH + +KDGRTLREIRYGSF RSF+LP
Sbjct 58 PGVDVDQDVQVELDRG----RLVIRGEHRDEHAE---EKDGRTLREIRYGSFHRSFQLPG 110
Query 121 HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK 159
HVT + I ASYDAG+LTVRV GAY A QA+RIAITK
Sbjct 111 HVTDDDITASYDAGMLTVRVTGAY---AGNQAKRIAITK 146
>gi|333988878|ref|YP_004521492.1| heat shock protein Hsp [Mycobacterium sp. JDM601]
gi|333484846|gb|AEF34238.1| heat shock protein Hsp (heat-stress-induced ribosome-binding
protein A) [Mycobacterium sp. JDM601]
Length=148
Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/159 (67%), Positives = 117/159 (74%), Gaps = 11/159 (6%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
M+ L LW RP +D DRW+RDFFGPA DW P AG F PAAEI KDGDDAVVRLEL
Sbjct 1 MSTLTLWPRP-FDT---DRWVRDFFGPATANDWRTPAAGGFRPAAEITKDGDDAVVRLEL 56
Query 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
PGIDV+KDV VELD G RLVIRGE RDEH Q D RTLRE+RYG+FRRSF +P
Sbjct 57 PGIDVEKDVTVELDGG----RLVIRGERRDEHIQADSGNDQRTLREVRYGAFRRSFAVPG 112
Query 121 HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK 159
HVT + ++ASYDAGVL+VRVAG + A Q QRIAITK
Sbjct 113 HVTGDDVSASYDAGVLSVRVAGVH---AGAQPQRIAITK 148
>gi|126432860|ref|YP_001068551.1| heat shock protein Hsp20 [Mycobacterium sp. JLS]
gi|126232660|gb|ABN96060.1| heat shock protein Hsp20 [Mycobacterium sp. JLS]
Length=148
Score = 191 bits (484), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/158 (67%), Positives = 121/158 (77%), Gaps = 14/158 (8%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAG-DFTPAAEIVKDGDDAVVRLE 59
M+N+AL RP WD+ DRW+RDFFGPAA D + A F+PAAEI +DGDDA VR+E
Sbjct 1 MSNVALRVRPAWDL---DRWVRDFFGPAAANDGFSGTAAPGFSPAAEIARDGDDATVRVE 57
Query 60 LPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLP 119
LPG+DVDKDV VE+D GQ LVI GE RDE +++ KDGRTLRE+RYGSFRRSFRLP
Sbjct 58 LPGVDVDKDVTVEVDNGQ----LVIHGERRDERSEE---KDGRTLREMRYGSFRRSFRLP 110
Query 120 AHVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAI 157
HVT +AI+ASYDAGVLTVRVAGAY A Q QRIAI
Sbjct 111 QHVTGDAISASYDAGVLTVRVAGAY---AGAQPQRIAI 145
>gi|108797237|ref|YP_637434.1| heat shock protein Hsp20 [Mycobacterium sp. MCS]
gi|119866322|ref|YP_936274.1| heat shock protein Hsp20 [Mycobacterium sp. KMS]
gi|108767656|gb|ABG06378.1| heat shock protein Hsp20 [Mycobacterium sp. MCS]
gi|119692411|gb|ABL89484.1| heat shock protein Hsp20 [Mycobacterium sp. KMS]
Length=148
Score = 190 bits (482), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 105/158 (67%), Positives = 121/158 (77%), Gaps = 14/158 (8%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAG-DFTPAAEIVKDGDDAVVRLE 59
M+N+AL RP WD+ DRW+RDFFGPAA D + A F+PAAEI +DGDDA VR+E
Sbjct 1 MSNVALRVRPAWDL---DRWVRDFFGPAAANDGFGGTAAPGFSPAAEIARDGDDATVRVE 57
Query 60 LPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLP 119
LPG+DVDKDV VE+D GQ LVI GE RDE +++ KDGRTLRE+RYGSFRRSFRLP
Sbjct 58 LPGVDVDKDVTVEVDNGQ----LVIHGERRDERSEE---KDGRTLREMRYGSFRRSFRLP 110
Query 120 AHVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAI 157
HVT +AI+ASYDAGVLTVRVAGAY A Q QRIAI
Sbjct 111 QHVTGDAISASYDAGVLTVRVAGAY---AGAQPQRIAI 145
>gi|120401322|ref|YP_951151.1| heat shock protein Hsp20 [Mycobacterium vanbaalenii PYR-1]
gi|119954140|gb|ABM11145.1| heat shock protein Hsp20 [Mycobacterium vanbaalenii PYR-1]
Length=143
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/157 (59%), Positives = 120/157 (77%), Gaps = 17/157 (10%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
M+N+ALW+RP W+ DR++RDFFGPA T+W + + PA E+ KDGDDAVVR++L
Sbjct 1 MSNVALWTRPAWNT---DRFVRDFFGPATATEWAKGI----NPAVEVTKDGDDAVVRVDL 53
Query 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
PG+DVDKDVNVE+D G RLVIRGE RD+ +++A +GR + E+RYG+F RSF LPA
Sbjct 54 PGVDVDKDVNVEVDKG----RLVIRGERRDQRSEEA---EGRKISEVRYGAFHRSFALPA 106
Query 121 HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAI 157
HVT EA++ASYDAGVLTVRVAGA++ +A R+AI
Sbjct 107 HVTGEAVSASYDAGVLTVRVAGAHRG---AEAHRVAI 140
>gi|118472842|ref|YP_884837.1| Hsp20/alpha crystallin family protein [Mycobacterium smegmatis
str. MC2 155]
gi|5070146|gb|AAD39038.1|AF072875_1 putative HSP20 [Mycobacterium smegmatis str. MC2 155]
gi|118174129|gb|ABK75025.1| Hsp20/alpha crystallin family protein [Mycobacterium smegmatis
str. MC2 155]
Length=145
Score = 170 bits (430), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 94/157 (60%), Positives = 114/157 (73%), Gaps = 19/157 (12%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
M A+W+RP W + D W+RDFFGPA DW++ FTPAAE+ +DG+DAVV +EL
Sbjct 5 MKTPAVWTRPAWQL---DNWVRDFFGPA--DDWFK----GFTPAAEVTRDGEDAVVSVEL 55
Query 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
PG+DV KDVNVE+D G RLVI GE RDE ++++ DGRT E+RYGSFRR F+LPA
Sbjct 56 PGVDVGKDVNVEVDRG----RLVIHGERRDERSEES---DGRTYSEVRYGSFRREFKLPA 108
Query 121 HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAI 157
HVT +A+ ASYDAGVL VRVAGAY A Q QRIAI
Sbjct 109 HVTGDAVTASYDAGVLKVRVAGAY---AGEQPQRIAI 142
>gi|145220992|ref|YP_001131670.1| heat shock protein Hsp20 [Mycobacterium gilvum PYR-GCK]
gi|315442037|ref|YP_004074916.1| heat shock protein Hsp20 [Mycobacterium sp. Spyr1]
gi|145213478|gb|ABP42882.1| heat shock protein Hsp20 [Mycobacterium gilvum PYR-GCK]
gi|315260340|gb|ADT97081.1| heat shock protein Hsp20 [Mycobacterium sp. Spyr1]
Length=150
Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/157 (54%), Positives = 112/157 (72%), Gaps = 14/157 (8%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
+NN ALW RP +D DR++R+FFGPA +W A PA E+ +DG+DAV+R++L
Sbjct 5 LNNKALWRRPAFDT---DRFVREFFGPATAGEW----AAGINPAVEVDRDGEDAVIRVDL 57
Query 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
PG+DV KDV VE+D G RLVIRGE RD +D ++ GR + E+RYGSF RSFRLP+
Sbjct 58 PGVDVAKDVTVEVDQG----RLVIRGERRDMKVEDDTERAGRKVSEVRYGSFHRSFRLPS 113
Query 121 HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAI 157
HV+ +A++A Y+AGVLTVRVAGA+K + QR+AI
Sbjct 114 HVSGDAVSAGYEAGVLTVRVAGAHKG---AEPQRVAI 147
>gi|296395008|ref|YP_003659892.1| heat shock protein Hsp20 [Segniliparus rotundus DSM 44985]
gi|296182155|gb|ADG99061.1| heat shock protein Hsp20 [Segniliparus rotundus DSM 44985]
Length=166
Score = 147 bits (370), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/159 (50%), Positives = 113/159 (72%), Gaps = 15/159 (9%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
M+N+ +W+R E +D +R+ FGP T W P FTPA EIV+DGDDA+VRL+L
Sbjct 1 MSNMTVWTRRNPFAE-FDALVRNAFGP--TESW--PTETAFTPATEIVRDGDDALVRLDL 55
Query 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
PG+DV+ DV VE+ GQ LV+RGE + EH+++ +G+++RE+RYGSFRR+F+LP
Sbjct 56 PGVDVENDVTVEVHDGQ----LVVRGERKSEHSEE---HEGQSMREVRYGSFRRTFKLPT 108
Query 121 HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK 159
TS+ I+A+YD GVLTVRVAGA+K+ + QRI++ +
Sbjct 109 RSTSDDISANYDCGVLTVRVAGAHKS---IEPQRISVGR 144
>gi|317508919|ref|ZP_07966556.1| hsp20-like protein [Segniliparus rugosus ATCC BAA-974]
gi|316252803|gb|EFV12236.1| hsp20-like protein [Segniliparus rugosus ATCC BAA-974]
Length=160
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/159 (53%), Positives = 111/159 (70%), Gaps = 15/159 (9%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
MNNL +W+R E +D ++ FGPA + W P A F+PAAEI +DGDDA+VR++L
Sbjct 1 MNNLNVWTRRSPFAE-FDTLVKSAFGPAES--W--PEATAFSPAAEIARDGDDALVRIDL 55
Query 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
PG+DV+ DV VE+ GQ LV+RGE + + G K G+ +RE+RYGSFRR F+LPA
Sbjct 56 PGVDVENDVTVEVQNGQ----LVVRGERKAPAHE--GPK-GQVVREVRYGSFRRVFKLPA 108
Query 121 HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK 159
V EAI+A+YDAGVLTVRVAG +K+ + QRI++TK
Sbjct 109 QVAPEAISANYDAGVLTVRVAGVHKS---AEPQRISVTK 144
>gi|169631477|ref|YP_001705126.1| heat shock protein Hsp20 [Mycobacterium abscessus ATCC 19977]
gi|169243444|emb|CAM64472.1| Heat shock protein Hsp20 [Mycobacterium abscessus]
Length=142
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/140 (55%), Positives = 99/140 (71%), Gaps = 14/140 (10%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
M+NL +W+R E +D +R FGPA T W P F P+A++VKDGDDA+VRL+L
Sbjct 1 MSNL-VWTRRSPFAE-FDALVRQSFGPA--TSWPTP---GFVPSADVVKDGDDALVRLDL 53
Query 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
PG+DV KDV VE++ G LV+ GE RDE + +GRTLRE+RYG+FRR+F LP
Sbjct 54 PGVDVGKDVTVEVERGT----LVVSGERRDERAEQT---EGRTLREVRYGTFRRTFTLPT 106
Query 121 HVTSEAIAASYDAGVLTVRV 140
HVT +AI+ASYDAG+LTV+V
Sbjct 107 HVTGDAISASYDAGILTVKV 126
>gi|229822217|ref|YP_002883743.1| heat shock protein Hsp20 [Beutenbergia cavernae DSM 12333]
gi|229568130|gb|ACQ81981.1| heat shock protein Hsp20 [Beutenbergia cavernae DSM 12333]
Length=182
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/157 (49%), Positives = 100/157 (64%), Gaps = 18/157 (11%)
Query 6 LWSRPVWD----VEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLELP 61
L +R VW +D + FGP A P + PAAE ++G DAVVRLELP
Sbjct 4 LPTRTVWTRRDPFTEFDGLIARSFGPGALRPSGSPAG--YRPAAETYREGADAVVRLELP 61
Query 62 GIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPAH 121
G+D ++DV VE+ G RLV+RGE RD +GRT+RE RYG+F RSFRLPA
Sbjct 62 GVDAEQDVTVEVTNG----RLVVRGERRDVR-----GAEGRTVREFRYGTFERSFRLPAS 112
Query 122 VTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAIT 158
V+++ ++ASYDAGVL+VRVAGAY A T+ ++IA+T
Sbjct 113 VSADDVSASYDAGVLSVRVAGAY---AGTEPRQIAVT 146
>gi|152964276|ref|YP_001360060.1| heat shock protein Hsp20 [Kineococcus radiotolerans SRS30216]
gi|151358793|gb|ABS01796.1| heat shock protein Hsp20 [Kineococcus radiotolerans SRS30216]
Length=138
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/158 (49%), Positives = 100/158 (64%), Gaps = 24/158 (15%)
Query 1 MNNLALWSRPVWDVEP-WDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLE 59
MN L++W R ++ + +D +R PA F PAAE+ +DGDDA+V+LE
Sbjct 1 MNTLSVWRRSPFETQAQFDALVRHSLSPAT----------GFAPAAEVGRDGDDALVKLE 50
Query 60 LPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLP 119
LPG+ +D DV VE++ G RLV+RGE +D + A GRT EIRYG+FRRSF LP
Sbjct 51 LPGVALD-DVTVEVESG----RLVVRGERKDPREESA---RGRT--EIRYGTFRRSFTLP 100
Query 120 AHVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAI 157
VT++A++ASYDAGVLTVRVAGA+ Q RI I
Sbjct 101 KSVTADAVSASYDAGVLTVRVAGAHTT---AQPTRIEI 135
>gi|311743147|ref|ZP_07716955.1| heat shock protein Hsp20 [Aeromicrobium marinum DSM 15272]
gi|311313827|gb|EFQ83736.1| heat shock protein Hsp20 [Aeromicrobium marinum DSM 15272]
Length=148
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/157 (44%), Positives = 96/157 (62%), Gaps = 17/157 (10%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLEL 60
M+ L++ SR +D +R PAA DFTPAAE V+DGDD V+R++L
Sbjct 1 MSTLSVRSRRDPLFAEFDALVRSTIAPAARERL------DFTPAAESVRDGDDVVLRMDL 54
Query 61 PGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
PGID +V+VE+ G RLV+ GE D+ GD T+ E+RYG+F+RSF LP+
Sbjct 55 PGID-PGEVSVEVVTG----RLVVSGERVDQRAD--GDATS-TISEVRYGAFKRSFGLPS 106
Query 121 HVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAI 157
H+ +A++A+YD GVL++RVAG Y A T+ RI +
Sbjct 107 HLGPDAVSAAYDRGVLSIRVAGVY---AGTEPTRITV 140
>gi|134096767|ref|YP_001102428.1| heat shock protein HSP20 [Saccharopolyspora erythraea NRRL 2338]
gi|291005189|ref|ZP_06563162.1| heat shock protein HSP20 [Saccharopolyspora erythraea NRRL 2338]
gi|133909390|emb|CAL99502.1| heat shock protein HSP20 [Saccharopolyspora erythraea NRRL 2338]
Length=160
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/138 (46%), Positives = 80/138 (58%), Gaps = 15/138 (10%)
Query 17 WDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPG 76
+D R FFG V G F PA + +DG D V++LELPG+D+ +DV VE+ G
Sbjct 23 FDSISRRFFGSQG-------VEG-FVPATNVERDGSDVVIKLELPGVDIAQDVEVEVTDG 74
Query 77 QPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPAHVTSEAIAASYDAGVL 136
RL I G+ R E T +G+ LREIR G+FRR F LP VT+E + A+YD GVL
Sbjct 75 ----RLSISGQRRTEKT--SGEDGAVLLREIRTGAFRREFNLPEGVTAEQVEANYDRGVL 128
Query 137 TVRVAGAYK-APAETQAQ 153
VRV K APA T+ Q
Sbjct 129 EVRVHEVSKPAPAPTKIQ 146
>gi|336177519|ref|YP_004582894.1| heat shock protein Hsp20 [Frankia symbiont of Datisca glomerata]
gi|334858499|gb|AEH08973.1| heat shock protein Hsp20 [Frankia symbiont of Datisca glomerata]
Length=179
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/108 (53%), Positives = 73/108 (68%), Gaps = 8/108 (7%)
Query 41 FTPAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKD 100
F P A++V +G+D VV LELPG D++KDV VEL+ G RLVIRGE D D+G
Sbjct 41 FAPLADVVTEGNDVVVHLELPGADIEKDVTVELERG----RLVIRGERADTRESDSGRV- 95
Query 101 GRTLREIRYGSFRRSFRLPAHVTSEAIAASYDAGVLTVRVAGAYKAPA 148
+RE RYG+F R F LP V ++ I+A+YD GVL+VR+AGA APA
Sbjct 96 --VVRERRYGAFHREFNLPEGVGADQISATYDKGVLSVRLAGAL-APA 140
>gi|158317047|ref|YP_001509555.1| heat shock protein Hsp20 [Frankia sp. EAN1pec]
gi|158112452|gb|ABW14649.1| heat shock protein Hsp20 [Frankia sp. EAN1pec]
Length=199
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/109 (50%), Positives = 72/109 (67%), Gaps = 7/109 (6%)
Query 43 PAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGR 102
P+A+++ DGDD ++ LELPG+DV+KDV VE+D G LV+RGE + +GR
Sbjct 48 PSADVLVDGDDVLINLELPGVDVEKDVTVEIDRGA----LVVRGERSSTQEKTV---NGR 100
Query 103 TLREIRYGSFRRSFRLPAHVTSEAIAASYDAGVLTVRVAGAYKAPAETQ 151
RE +GSFRR F LP +V + I+A YD GVLTVR+AGA AP T+
Sbjct 101 VHRERWHGSFRREFALPENVDATGISARYDRGVLTVRLAGAAAAPRSTR 149
>gi|86739887|ref|YP_480287.1| heat shock protein Hsp20 [Frankia sp. CcI3]
gi|86566749|gb|ABD10558.1| heat shock protein Hsp20 [Frankia sp. CcI3]
Length=195
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/143 (43%), Positives = 86/143 (61%), Gaps = 11/143 (7%)
Query 17 WDRWLRDFFGPAATTDWYRPVAGDF-TPAAEIVKDGDDAVVRLELPGIDVDKDVNVELDP 75
+D +R +GP R +F P+A++V +G D ++ LELPG+DV++DV VE+D
Sbjct 19 FDEIVRRVWGPRRPVLTGRSSVTEFAVPSADVVTEGADVLINLELPGVDVERDVAVEIDR 78
Query 76 GQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPAHVTSEAIAASYDAGV 135
G RLV+RG+ + GR RE +GSFRR FRLP V ++ I+A+YD G+
Sbjct 79 G----RLVVRGKR---AAGSESEHAGRVHRERWHGSFRREFRLPEGVEAQRISATYDRGI 131
Query 136 LTVRVAGAYKAPAETQAQRIAIT 158
LTVR+ GA AE +A RI IT
Sbjct 132 LTVRLVGAA---AEPKATRIEIT 151
>gi|312198906|ref|YP_004018967.1| heat shock protein Hsp20 [Frankia sp. EuI1c]
gi|311230242|gb|ADP83097.1| heat shock protein Hsp20 [Frankia sp. EuI1c]
Length=220
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/144 (45%), Positives = 83/144 (58%), Gaps = 16/144 (11%)
Query 17 WDR--WLRDFFGPAATTD-------WYRPVAGDFTPAAEIVKDGDDAVVRLELPGIDVDK 67
WDR R PAA T + P P+A++V GDD V+ LELPG+DV+K
Sbjct 29 WDRPRARRASLAPAARTAPAGKAVATFGPGFRGIVPSADVVTAGDDVVINLELPGLDVEK 88
Query 68 DVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPAHVTSEAI 127
DV VE+ G RLV+RGE R T+ A + GR RE +GSFRR F LP V ++ +
Sbjct 89 DVAVEIARG----RLVVRGE-RGSSTESA--EGGRIRRESWHGSFRREFSLPESVAADKV 141
Query 128 AASYDAGVLTVRVAGAYKAPAETQ 151
A+YD GVL+VR+ GA PA T+
Sbjct 142 VATYDRGVLSVRLPGAGAVPASTR 165
>gi|288920811|ref|ZP_06415109.1| heat shock protein Hsp20 [Frankia sp. EUN1f]
gi|288347770|gb|EFC82049.1| heat shock protein Hsp20 [Frankia sp. EUN1f]
Length=190
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 75/112 (67%), Gaps = 7/112 (6%)
Query 40 DFTPAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDK 99
+ P+A+++ DGDD ++ LELPG+DV+KDV VE+D G LV+RGE E +
Sbjct 52 NVVPSADVLVDGDDVLINLELPGVDVEKDVMVEIDRGA----LVVRGERSSEEEETV--- 104
Query 100 DGRTLREIRYGSFRRSFRLPAHVTSEAIAASYDAGVLTVRVAGAYKAPAETQ 151
+GR RE +GSFRR F LP +V + AI+A YD GVLTVR+AGA AP T+
Sbjct 105 NGRVHRERWHGSFRREFALPENVDATAISARYDRGVLTVRLAGAAAAPRSTR 156
>gi|111221322|ref|YP_712116.1| putative small heat shock protein [Frankia alni ACN14a]
gi|111148854|emb|CAJ60532.1| putative Small heat shock protein [Frankia alni ACN14a]
Length=244
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 79/116 (69%), Gaps = 10/116 (8%)
Query 43 PAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGR 102
P+A++V +G+D ++ LELPG+DV++DV VE+D G RLV+RG+ + Q+ + GR
Sbjct 85 PSADVVTEGEDVLINLELPGVDVERDVVVEIDRG----RLVVRGQRGGQREQE---RAGR 137
Query 103 TLREIRYGSFRRSFRLPAHVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAIT 158
RE GSFRR FRLP V + I+A YD GVLTVR+AGA AE +A RIA+T
Sbjct 138 VHRESWSGSFRREFRLPERVDASRISAGYDRGVLTVRLAGAA---AEPKATRIAVT 190
>gi|196231663|ref|ZP_03130520.1| heat shock protein Hsp20 [Chthoniobacter flavus Ellin428]
gi|196224135|gb|EDY18648.1| heat shock protein Hsp20 [Chthoniobacter flavus Ellin428]
Length=175
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/116 (39%), Positives = 67/116 (58%), Gaps = 10/116 (8%)
Query 42 TPAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDG 101
+PA ++ D D+ VV++ELPG++ D ++N+ LD G L + GE + EH K+G
Sbjct 69 SPALDVFDDKDNLVVKVELPGLNKD-EINISLDKGV----LTVSGERKQEHES----KEG 119
Query 102 RTLREIRY-GSFRRSFRLPAHVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIA 156
+ R RY G F RS LPA V S ++ASY G+LTV + A +A + A +A
Sbjct 120 ESFRSERYFGKFHRSVTLPATVDSTKVSASYKDGILTVDLPKAEEAKPKQIAVNVA 175
>gi|269127022|ref|YP_003300392.1| heat shock protein Hsp20 [Thermomonospora curvata DSM 43183]
gi|268311980|gb|ACY98354.1| heat shock protein Hsp20 [Thermomonospora curvata DSM 43183]
Length=149
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/110 (43%), Positives = 66/110 (60%), Gaps = 13/110 (11%)
Query 50 DGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRY 109
+GDD +VR ELPG+D DKD+ + + L IR E ++E+ ++GR E RY
Sbjct 52 EGDDYIVRAELPGVDPDKDIEITVSDDA----LHIRAERQEEY------REGRR-SEFRY 100
Query 110 GSFRRSFRLPAHVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK 159
GSF R+ LP V ++++ ASYD GVLTV V + AE A+R+AI K
Sbjct 101 GSFSRTLPLPKGVNADSVKASYDKGVLTVTVPLPKEPKAE--AKRVAIKK 148
>gi|26990030|ref|NP_745455.1| heat shock protein, [Pseudomonas putida KT2440]
gi|24984953|gb|AAN68919.1|AE016523_8 heat shock protein, putative [Pseudomonas putida KT2440]
Length=129
Score = 70.5 bits (171), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/114 (40%), Positives = 67/114 (59%), Gaps = 15/114 (13%)
Query 27 PAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRG 86
PA ++W +AGD + +DG+ VVRLE+PG+ V +D+N+E+ L+IRG
Sbjct 15 PALASNWG-LLAGD------LYEDGERIVVRLEIPGM-VKEDLNLEVRG----DTLIIRG 62
Query 87 EHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPAHVTSEAIAASYDAGVLTVRV 140
E R E Q G +R+ +GSFRR+FRLPA V +E +A + GVL + +
Sbjct 63 EKRVEQEQGNGHY---RVRQCTFGSFRRTFRLPAEVIAEQASARCNNGVLRIEL 113
>gi|257056297|ref|YP_003134129.1| molecular chaperone (small heat shock protein) [Saccharomonospora
viridis DSM 43017]
gi|256586169|gb|ACU97302.1| molecular chaperone (small heat shock protein) [Saccharomonospora
viridis DSM 43017]
Length=131
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/137 (33%), Positives = 72/137 (53%), Gaps = 13/137 (9%)
Query 21 LRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVS 80
RD F + RP + E +GD ++R ELPGI+VD+D+++ + +
Sbjct 5 FRDLFDMLPSLSSLRPAMDIHSIRIEDKLEGDTYIIRAELPGINVDEDLDISVQN----N 60
Query 81 RLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPAHVTSEAIAASYDAGVLTVRV 140
L I + +E T++ GR+ E RYGSF R+ LP ++I ASY+ G+LT+RV
Sbjct 61 LLTIEAQRSEEQTEN-----GRS--EFRYGSFVRTVALPEGAQEDSIDASYEDGILTIRV 113
Query 141 AGAYKAPAETQAQRIAI 157
P E +A++I +
Sbjct 114 --KLSKPEEKKARQIPV 128
>gi|78043114|ref|YP_361216.1| hsp20/alpha crystallin family protein [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995229|gb|ABB14128.1| hsp20/alpha crystallin family protein [Carboxydothermus hydrogenoformans
Z-2901]
Length=145
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/152 (35%), Positives = 76/152 (50%), Gaps = 21/152 (13%)
Query 16 PWDRW---------LRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLELPGIDVD 66
P+D W + FF + + P A F+P EI ++G D VVR E+PG++
Sbjct 4 PFDPWREMLNFKNQMERFFERGDFLEPFNP-ARLFSPRVEIFEEGADVVVRAEIPGLNAK 62
Query 67 KDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIR-YGSFRRSFRLPAHVTSE 125
+D+ V ++P L +RGE RDE + K R R R YG F R+ LPA V +
Sbjct 63 EDLEVIVEP----ESLTLRGEIRDERER----KQERFYRSERYYGKFSRTIALPAEVEPD 114
Query 126 AIAASYDAGVLTVRVAGAYKAPAETQAQRIAI 157
ASY G+L VR+ + K +A+RI I
Sbjct 115 HARASYQNGILEVRMKKSGK--NNPRARRIEI 144
>gi|284097577|ref|ZP_06385635.1| heat shock protein Hsp20 [Candidatus Poribacteria sp. WGA-A3]
gi|283830908|gb|EFC34960.1| heat shock protein Hsp20 [Candidatus Poribacteria sp. WGA-A3]
Length=146
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/113 (39%), Positives = 63/113 (56%), Gaps = 16/113 (14%)
Query 28 AATTDWYRPVAGDFTPAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGE 87
A+T +W PV + +D + V +LPGID+ KDV + + + L + GE
Sbjct 33 ASTVNWVPPV--------NVYEDTEHLFVEAQLPGIDM-KDVKISVTD----NTLQLHGE 79
Query 88 HRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPAHVTSEAIAASYDAGVLTVRV 140
++E T+D +D RE +YG+F RSFRLP +V + A YD GVLTV+V
Sbjct 80 RKEERTED---RDNYHFREAQYGAFARSFRLPGYVKPDLATARYDKGVLTVQV 129
>gi|10802712|gb|AAG23578.1|AF244629_1 small heat-shock protein [Carboxydothermus hydrogenoformans]
Length=116
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/119 (40%), Positives = 65/119 (55%), Gaps = 11/119 (9%)
Query 40 DFTPAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDK 99
DF PA I ++G D VVR E+PG++ +D+ V ++P L +RGE RDE + K
Sbjct 7 DFXPAGGIFEEGADVVVRAEIPGLNAKEDLEVIVEP----ESLTLRGEIRDERER----K 58
Query 100 DGRTLREIR-YGSFRRSFRLPAHVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAI 157
R R R YG F R+ LPA V + ASY G+L VR+ + K +A+RI I
Sbjct 59 QERFYRSERYYGKFSRTIALPAEVEPDHARASYQNGILEVRMKKSGK--NNPRARRIEI 115
>gi|255292053|dbj|BAH90534.1| heat shock protein [uncultured bacterium]
Length=173
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/154 (36%), Positives = 75/154 (49%), Gaps = 22/154 (14%)
Query 15 EPWDRWLRDFFG----------PAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLELPGID 64
E WD DFF P R GD PA ++ + ++ ELPG+D
Sbjct 28 ERWDNLFDDFFADFPRWSSLRRPFDIEPLRRLSGGDLVPAVDVTEQDTRYLISAELPGLD 87
Query 65 VDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPAHVTS 124
+KD++VE+ L +RGE R E + DK G L E YGSF RSFRLPA
Sbjct 88 -EKDISVEVQD----DLLTLRGEKRAEREEK--DK-GYHLSERSYGSFSRSFRLPADADI 139
Query 125 EAIAASYDAGVLTVRVAGAYKAP-AETQAQRIAI 157
+AS+ GVL++ V K+P A +Q ++I +
Sbjct 140 GKASASFSKGVLSIEVP---KSPEAHSQVKKIDV 170
>gi|124004464|ref|ZP_01689309.1| small heat shock protein [Microscilla marina ATCC 23134]
gi|123990036|gb|EAY29550.1| small heat shock protein [Microscilla marina ATCC 23134]
Length=148
Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/152 (33%), Positives = 73/152 (49%), Gaps = 20/152 (13%)
Query 19 RWLRDFFGPAATT--------DWYRPVAGDFTPAAEIVKDGDDAVVRLELPGIDVDKDVN 70
+W RD F P T D++ G + PA I + DD + + PG+D D
Sbjct 5 KWNRDQFLPDFTNVLNELFDDDFFS--KGKYMPAVNIKDNTDDYHIEVAAPGLD-KGDFK 61
Query 71 VELDPGQPVSRLVIRGEHRDEHTQDA----GDKDGRTLREIRYGSFRRSFRLPAHVTSEA 126
+ LD L I E + EH +++ GDK T RE Y SF RSF LP V +
Sbjct 62 ISLDDD----VLTISSEKKSEHVENSEESQGDKPTYTRREFSYQSFSRSFTLPKSVKHDD 117
Query 127 IAASYDAGVLTVRVAGAYKAPAETQAQRIAIT 158
I+A+Y+ GVL++ V +A E + + I I+
Sbjct 118 ISANYNNGVLSI-VVPKEEASKEGEVKTIDIS 148
>gi|320109103|ref|YP_004184693.1| heat shock protein Hsp20 [Terriglobus saanensis SP1PR4]
gi|319927624|gb|ADV84699.1| heat shock protein Hsp20 [Terriglobus saanensis SP1PR4]
Length=161
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/140 (36%), Positives = 70/140 (50%), Gaps = 23/140 (16%)
Query 10 PVWDVEPWDRWLRDFFGPAATTDWYRPVAGD--------FTPAAEIVKDGDDAVVRLELP 61
P+ DV L F +D+ RP G+ FTP +I +D +R+E+P
Sbjct 8 PLHDVAVLQNRLNSIF-----SDFARPTTGETESLNSGSFTPPVDIYEDPQKLALRIEVP 62
Query 62 GI-DVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPA 120
GI D D+ VE + L +RGE R T+D + R R RYGSF RSF LP
Sbjct 63 GIRPEDVDIRVE------NTTLTVRGE-RKFATEDKEENFHRVER--RYGSFVRSFTLPQ 113
Query 121 HVTSEAIAASYDAGVLTVRV 140
+ +E I A+Y+ GVLT+ +
Sbjct 114 TLDTEQIKANYEHGVLTLEL 133
>gi|301059485|ref|ZP_07200398.1| Hsp20/alpha crystallin family protein [delta proteobacterium
NaphS2]
gi|300446380|gb|EFK10232.1| Hsp20/alpha crystallin family protein [delta proteobacterium
NaphS2]
Length=151
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/145 (38%), Positives = 75/145 (52%), Gaps = 17/145 (11%)
Query 1 MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGD----FTPAAEIVKDGDDAVV 56
M LA WSRP DV + F DW AG + PA ++ + + +V
Sbjct 3 MRELAPWSRP-GDVIGLRNEMNTLFD--RFFDWRPFSAGSGVSVWRPALDVSETPKEVLV 59
Query 57 RLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLR-EIRYGSFRRS 115
R ELPG+D K++++ L L ++GE + Q+ +KD R E YGSF RS
Sbjct 60 RAELPGMD-PKEIDISLHDNV----LTVKGERK----QEKEEKDENYHRVERSYGSFVRS 110
Query 116 FRLPAHVTSEAIAASYDAGVLTVRV 140
FRLPA V SE + ASY G+LT+R+
Sbjct 111 FRLPAEVESEKVGASYKDGILTIRL 135
>gi|16329588|ref|NP_440316.1| chaperone [Synechocystis sp. PCC 6803]
gi|1652071|dbj|BAA16996.1| 16.6 kDa small heat shock protein, molecular chaperon [Synechocystis
sp. PCC 6803]
gi|339272681|dbj|BAK49168.1| 16.6 kDa small heat shock protein, molecular chaperon [Synechocystis
sp. PCC 6803]
Length=146
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/145 (31%), Positives = 76/145 (53%), Gaps = 11/145 (7%)
Query 3 NLALWSRPVWDVEPWDRWLRDFFGPA-ATTDWYRPVAGDFTPAAEIVKDGDDAVVRLELP 61
+L L++ P+ +++ + + + F TD + G F P AE+ + + V++LELP
Sbjct 2 SLILYN-PLREMDNFQQQMNQLFEEVFVPTDRHGDRQG-FNPKAELTETEEAYVLKLELP 59
Query 62 GIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPAH 121
G+D D LD + + G+ +D H + +KDG E RYGSFRR +P
Sbjct 60 GMDPDN-----LDIQAARDAVTVSGDRQDTH---STEKDGVRRTEFRYGSFRRVIPVPGA 111
Query 122 VTSEAIAASYDAGVLTVRVAGAYKA 146
+ + + A+YDAG+LT+ + +A
Sbjct 112 IQNTEVKANYDAGILTLTLPKVEEA 136
>gi|146282582|ref|YP_001172735.1| HSP20 family protein [Pseudomonas stutzeri A1501]
gi|145570787|gb|ABP79893.1| heat shock protein, HSP20 family [Pseudomonas stutzeri A1501]
Length=176
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/98 (43%), Positives = 58/98 (60%), Gaps = 8/98 (8%)
Query 43 PAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGR 102
PA ++V+ + + ELPG+D +KDV V+L + LVI+GE R EH ++ KDG
Sbjct 69 PAVDVVEKENSFEITAELPGLD-EKDVEVKL----VGNSLVIKGEKRQEHKEE---KDGY 120
Query 103 TLREIRYGSFRRSFRLPAHVTSEAIAASYDAGVLTVRV 140
L E +GSF+RSF LP V E I A + GVL V +
Sbjct 121 HLSERSFGSFQRSFALPDGVDREQIEAKFGKGVLRVSL 158
>gi|339494195|ref|YP_004714488.1| HSP20 family protein [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|327480840|gb|AEA84150.1| HSP20 family protein [Pseudomonas stutzeri DSM 4166]
gi|338801567|gb|AEJ05399.1| HSP20 family protein [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length=176
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/98 (43%), Positives = 58/98 (60%), Gaps = 8/98 (8%)
Query 43 PAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGR 102
PA ++V+ + + ELPG+D +KDV V+L + LVI+GE R EH ++ KDG
Sbjct 69 PAVDVVEKENSFEITAELPGLD-EKDVEVKL----VGNSLVIKGEKRQEHKEE---KDGY 120
Query 103 TLREIRYGSFRRSFRLPAHVTSEAIAASYDAGVLTVRV 140
L E +GSF+RSF LP V E I A + GVL V +
Sbjct 121 HLSERSFGSFQRSFALPDGVDREQIEAKFGKGVLRVSL 158
>gi|57234242|ref|YP_181679.1| Hsp20/alpha crystallin family protein [Dehalococcoides ethenogenes
195]
gi|57224690|gb|AAW39747.1| Hsp20/alpha crystallin family protein [Dehalococcoides ethenogenes
195]
Length=162
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/153 (29%), Positives = 81/153 (53%), Gaps = 19/153 (12%)
Query 9 RPVWDVEPWDRWLRDFFGPAATTDWYRPVAG--DFTPAAEIVKDGDDAVVRLELPGIDVD 66
+P W + PW R R+ P + +A D+ PA E+++ D +++ E+PGI+ +
Sbjct 7 QPGWSLRPW-RPFREILSPGL----WSMLANERDWLPATEMLELKDKYLIKAEMPGIN-E 60
Query 67 KDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPAHVTSEA 126
+D+ V + L I+GE + +T + + + E YGSF RS LP + + +
Sbjct 61 EDIEVSVSDNV----LTIKGEKK--YTSEVSE-ENYYFSERSYGSFSRSMTLPNNTSIQN 113
Query 127 IAASYDAGVLTVRVAGAYKAPAETQAQRIAITK 159
IAA+ D G+L + + +E +A+++++TK
Sbjct 114 IAATLDNGILEISIPKV----SEAKAKKVSVTK 142
>gi|334119369|ref|ZP_08493455.1| heat shock protein Hsp20 [Microcoleus vaginatus FGP-2]
gi|333458157|gb|EGK86776.1| heat shock protein Hsp20 [Microcoleus vaginatus FGP-2]
Length=159
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/145 (34%), Positives = 76/145 (53%), Gaps = 14/145 (9%)
Query 4 LALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLELPGI 63
L + +P ++E L F ATT A + PA E+V GD+ V++ +LPGI
Sbjct 2 LMRYWQPFTEIETIREQLDKVFDQRATTRDNSEAA--WMPALELVDAGDNFVLKAQLPGI 59
Query 64 DVDKDVNVELDPGQPVSR--LVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPAH 121
D KD++V+ V+R + I GE R E+T++ K E RYG F R LPAH
Sbjct 60 D-PKDIDVQ------VTREAISISGERRYENTEE---KPRYVRSEFRYGKFHRVLPLPAH 109
Query 122 VTSEAIAASYDAGVLTVRVAGAYKA 146
+ ++++ A Y G+LT+ + +A
Sbjct 110 IQNDSVQAEYKDGILTLTLPKVTEA 134
>gi|296444975|ref|ZP_06886937.1| heat shock protein Hsp20 [Methylosinus trichosporium OB3b]
gi|296257643|gb|EFH04708.1| heat shock protein Hsp20 [Methylosinus trichosporium OB3b]
Length=173
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/99 (45%), Positives = 61/99 (62%), Gaps = 6/99 (6%)
Query 42 TPAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDG 101
TPA ++++ + V ELPG+D +K+V V+L G LVI GE ++E + G
Sbjct 63 TPAVDLIEKDKEYQVTAELPGLD-EKNVEVKLQNGS----LVISGEKKEEREEKD-KDKG 116
Query 102 RTLREIRYGSFRRSFRLPAHVTSEAIAASYDAGVLTVRV 140
L E R+GSFRR+FRLP V E IAA++ GVLTVR+
Sbjct 117 YFLSERRFGSFRRAFRLPEDVDKEKIAATFAKGVLTVRL 155
>gi|282899469|ref|ZP_06307435.1| Heat shock protein Hsp20 [Cylindrospermopsis raciborskii CS-505]
gi|281195626|gb|EFA70557.1| Heat shock protein Hsp20 [Cylindrospermopsis raciborskii CS-505]
Length=164
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/142 (34%), Positives = 72/142 (51%), Gaps = 11/142 (7%)
Query 10 PVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLELPGIDVDKDV 69
P ++E R + F TD +F PAAE+ + D +++ELPG+ KDV
Sbjct 26 PFREIETLQRRMGRLFERMLPTDGGERAGLNFIPAAELEETEDAFKLKVELPGLTA-KDV 84
Query 70 NVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPAHVTSEAIAA 129
VE+ P + VS I GE + E T + ++G T E RYG F+R LP+ V ++ + A
Sbjct 85 TVEVTP-EAVS---ITGERKSETTTE---REGYTRSEFRYGKFQRVIPLPSTVKNQEVKA 137
Query 130 SYDAGVLTVRVAGAYKAPAETQ 151
Y G+L + + K AE Q
Sbjct 138 EYKDGILRLNLP---KTEAEKQ 156
Lambda K H
0.319 0.136 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128329112580
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40