BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0256c Length=556 Score E Sequences producing significant alignments: (Bits) Value gi|31791434|ref|NP_853927.1| PPE family protein [Mycobacterium b... 1083 0.0 gi|340625294|ref|YP_004743746.1| PPE family protein [Mycobacteri... 1082 0.0 gi|298523724|ref|ZP_07011133.1| ppe family protein [Mycobacteriu... 1081 0.0 gi|15839636|ref|NP_334673.1| PPE family protein [Mycobacterium t... 1078 0.0 gi|289445789|ref|ZP_06435533.1| PPE family protein [Mycobacteriu... 1078 0.0 gi|294994731|ref|ZP_06800422.1| PPE family protein [Mycobacteriu... 1071 0.0 gi|148660021|ref|YP_001281544.1| PPE family protein [Mycobacteri... 1011 0.0 gi|167968979|ref|ZP_02551256.1| PPE family protein [Mycobacteriu... 996 0.0 gi|289748739|ref|ZP_06508117.1| PPE family protein [Mycobacteriu... 882 0.0 gi|307082389|ref|ZP_07491559.1| PPE family protein [Mycobacteriu... 874 0.0 gi|306801842|ref|ZP_07438510.1| PPE family protein [Mycobacteriu... 872 0.0 gi|289760363|ref|ZP_06519741.1| PPE family protein [Mycobacteriu... 794 0.0 gi|323717087|gb|EGB26297.1| PPE family protein [Mycobacterium tu... 772 0.0 gi|306787247|ref|ZP_07425569.1| putative PPE family protein [Myc... 768 0.0 gi|289764373|ref|ZP_06523751.1| PPE family protein [Mycobacteriu... 740 0.0 gi|289748026|ref|ZP_06507404.1| PPE family protein [Mycobacteriu... 701 0.0 gi|289748027|ref|ZP_06507405.1| PPE family protein [Mycobacteriu... 655 0.0 gi|339296964|gb|AEJ49074.1| PPE family protein [Mycobacterium tu... 618 1e-174 gi|15827976|ref|NP_302239.1| PPE-family protein [Mycobacterium l... 588 1e-165 gi|289756323|ref|ZP_06515701.1| PPE family protein [Mycobacteriu... 585 9e-165 gi|240167866|ref|ZP_04746525.1| PPE family protein [Mycobacteriu... 545 7e-153 gi|339296965|gb|AEJ49075.1| PPE family protein [Mycobacterium tu... 469 5e-130 gi|118463459|ref|YP_880574.1| PPE family protein [Mycobacterium ... 462 8e-128 gi|212595932|gb|ACJ35535.1| PPE9 [Mycobacterium avium subsp. avium] 462 1e-127 gi|336458670|gb|EGO37632.1| PPE-repeat containing protein [Mycob... 442 6e-122 gi|212596465|gb|ACJ35580.1| PPE9 [Mycobacterium intracellulare A... 422 8e-116 gi|183982947|ref|YP_001851238.1| PPE family protein [Mycobacteri... 396 6e-108 gi|41408693|ref|NP_961529.1| hypothetical protein MAP2595 [Mycob... 389 6e-106 gi|333991826|ref|YP_004524440.1| PPE family protein [Mycobacteri... 378 1e-102 gi|254774205|ref|ZP_05215721.1| PPE family protein [Mycobacteriu... 367 4e-99 gi|296170084|ref|ZP_06851686.1| PPE family protein [Mycobacteriu... 364 3e-98 gi|289568160|ref|ZP_06448387.1| predicted protein [Mycobacterium... 320 4e-85 gi|323717247|gb|EGB26456.1| PPE family protein [Mycobacterium tu... 296 8e-78 gi|183981440|ref|YP_001849731.1| PPE family protein [Mycobacteri... 277 3e-72 gi|289760362|ref|ZP_06519740.1| PPE family protein [Mycobacteriu... 261 2e-67 gi|240171483|ref|ZP_04750142.1| PPE-family protein [Mycobacteriu... 247 4e-63 gi|289748258|ref|ZP_06507636.1| PPE family protein [Mycobacteriu... 243 9e-62 gi|340628712|ref|YP_004747164.1| ppe family protein [Mycobacteri... 242 1e-61 gi|240168498|ref|ZP_04747157.1| PPE family protein, PPE4 [Mycoba... 241 2e-61 gi|296167589|ref|ZP_06849914.1| PPE family protein [Mycobacteriu... 241 3e-61 gi|342859230|ref|ZP_08715884.1| hypothetical protein MCOL_10138 ... 236 9e-60 gi|240173305|ref|ZP_04751963.1| PPE family protein, PPE3 [Mycoba... 235 2e-59 gi|254818900|ref|ZP_05223901.1| PPE family protein [Mycobacteriu... 232 1e-58 gi|296167571|ref|ZP_06849908.1| PPE family protein [Mycobacteriu... 226 9e-57 gi|41409835|ref|NP_962671.1| hypothetical protein MAP3737 [Mycob... 223 6e-56 gi|336460155|gb|EGO39060.1| PPE-repeat containing protein [Mycob... 223 6e-56 gi|254775170|ref|ZP_05216686.1| PPE family protein [Mycobacteriu... 222 1e-55 gi|296165048|ref|ZP_06847603.1| PPE family protein [Mycobacteriu... 221 3e-55 gi|296165161|ref|ZP_06847709.1| PPE family protein [Mycobacteriu... 219 1e-54 gi|41409863|ref|NP_962699.1| hypothetical protein MAP3765 [Mycob... 218 3e-54 >gi|31791434|ref|NP_853927.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|57116708|ref|YP_177704.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|121636169|ref|YP_976392.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] 38 more sequence titles Length=556 Score = 1083 bits (2801), Expect = 0.0, Method: Compositional matrix adjust. Identities = 556/556 (100%), Positives = 556/556 (100%), Gaps = 0/556 (0%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL Sbjct 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 Query 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT Sbjct 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 Query 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL Sbjct 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 Query 361 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA 420 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA Sbjct 361 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA 420 Query 421 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIK 480 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIK Sbjct 421 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIK 480 Query 481 QLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRT 540 QLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRT Sbjct 481 QLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRT 540 Query 541 PMMPGTWDTDSATRVE 556 PMMPGTWDTDSATRVE Sbjct 541 PMMPGTWDTDSATRVE 556 >gi|340625294|ref|YP_004743746.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340003484|emb|CCC42604.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=556 Score = 1082 bits (2797), Expect = 0.0, Method: Compositional matrix adjust. Identities = 555/556 (99%), Positives = 556/556 (100%), Gaps = 0/556 (0%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL Sbjct 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 Query 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT Sbjct 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 Query 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL Sbjct 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 Query 361 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA 420 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA Sbjct 361 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA 420 Query 421 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIK 480 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPD+AEAPAAAAAPEEQVQPQRRRRPKIK Sbjct 421 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDNAEAPAAAAAPEEQVQPQRRRRPKIK 480 Query 481 QLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRT 540 QLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRT Sbjct 481 QLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRT 540 Query 541 PMMPGTWDTDSATRVE 556 PMMPGTWDTDSATRVE Sbjct 541 PMMPGTWDTDSATRVE 556 >gi|298523724|ref|ZP_07011133.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A] gi|298493518|gb|EFI28812.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A] Length=556 Score = 1081 bits (2795), Expect = 0.0, Method: Compositional matrix adjust. Identities = 555/556 (99%), Positives = 555/556 (99%), Gaps = 0/556 (0%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL Sbjct 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 Query 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT Sbjct 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 Query 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL Sbjct 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 Query 361 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA 420 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA Sbjct 361 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA 420 Query 421 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIK 480 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIK Sbjct 421 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIK 480 Query 481 QLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRT 540 QLGRGYEYLDLDPET HDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRT Sbjct 481 QLGRGYEYLDLDPETDHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRT 540 Query 541 PMMPGTWDTDSATRVE 556 PMMPGTWDTDSATRVE Sbjct 541 PMMPGTWDTDSATRVE 556 >gi|15839636|ref|NP_334673.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13879755|gb|AAK44487.1| PPE family protein [Mycobacterium tuberculosis CDC1551] Length=556 Score = 1078 bits (2789), Expect = 0.0, Method: Compositional matrix adjust. Identities = 554/556 (99%), Positives = 555/556 (99%), Gaps = 0/556 (0%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL Sbjct 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 Query 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT Sbjct 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 Query 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL Sbjct 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 Query 361 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA 420 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPP GPPPPPVTAPPPVTGA Sbjct 361 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPLGPPPPPVTAPPPVTGA 420 Query 421 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIK 480 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPA+AAAPEEQVQPQRRRRPKIK Sbjct 421 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPASAAAPEEQVQPQRRRRPKIK 480 Query 481 QLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRT 540 QLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRT Sbjct 481 QLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRT 540 Query 541 PMMPGTWDTDSATRVE 556 PMMPGTWDTDSATRVE Sbjct 541 PMMPGTWDTDSATRVE 556 >gi|289445789|ref|ZP_06435533.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289418747|gb|EFD15948.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=556 Score = 1078 bits (2787), Expect = 0.0, Method: Compositional matrix adjust. Identities = 554/556 (99%), Positives = 555/556 (99%), Gaps = 0/556 (0%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 GVLMATNFFGINTIPIALN SDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA Sbjct 121 GVLMATNFFGINTIPIALNGSDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL Sbjct 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 Query 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT Sbjct 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 Query 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL Sbjct 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 Query 361 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA 420 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA Sbjct 361 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA 420 Query 421 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIK 480 GIQSFGYLVG+LNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIK Sbjct 421 GIQSFGYLVGNLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIK 480 Query 481 QLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRT 540 QLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRT Sbjct 481 QLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRT 540 Query 541 PMMPGTWDTDSATRVE 556 PMMPGTWDTDSATRVE Sbjct 541 PMMPGTWDTDSATRVE 556 >gi|294994731|ref|ZP_06800422.1| PPE family protein [Mycobacterium tuberculosis 210] Length=550 Score = 1071 bits (2771), Expect = 0.0, Method: Compositional matrix adjust. Identities = 550/550 (100%), Positives = 550/550 (100%), Gaps = 0/550 (0%) Query 7 MASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTWDGPTAA 66 MASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTWDGPTAA Sbjct 1 MASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTWDGPTAA 60 Query 67 VYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALHGVLMAT 126 VYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALHGVLMAT Sbjct 61 VYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALHGVLMAT 120 Query 127 NFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKANAPTAA 186 NFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKANAPTAA Sbjct 121 NFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKANAPTAA 180 Query 187 SDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSLGNPLTF 246 SDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSLGNPLTF Sbjct 181 SDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSLGNPLTF 240 Query 247 LSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTTVEAIGT 306 LSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTTVEAIGT Sbjct 241 LSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTTVEAIGT 300 Query 307 IITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGLVGIPPS 366 IITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGLVGIPPS Sbjct 301 IITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGLVGIPPS 360 Query 367 APPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGAGIQSFG 426 APPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGAGIQSFG Sbjct 361 APPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGAGIQSFG 420 Query 427 YLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIKQLGRGY 486 YLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIKQLGRGY Sbjct 421 YLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIKQLGRGY 480 Query 487 EYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRTPMMPGT 546 EYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRTPMMPGT Sbjct 481 EYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRTPMMPGT 540 Query 547 WDTDSATRVE 556 WDTDSATRVE Sbjct 541 WDTDSATRVE 550 >gi|148660021|ref|YP_001281544.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|148504173|gb|ABQ71982.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=520 Score = 1011 bits (2614), Expect = 0.0, Method: Compositional matrix adjust. Identities = 519/520 (99%), Positives = 520/520 (100%), Gaps = 0/520 (0%) Query 37 LSIAYAETADELAALLAAVQAGTWDGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETA 96 +SIAYAETADELAALLAAVQAGTWDGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETA Sbjct 1 MSIAYAETADELAALLAAVQAGTWDGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETA 60 Query 97 ATAYGTALAAMPTLAELGANHALHGVLMATNFFGINTIPIALNESDYARMWIQAATTMAS 156 ATAYGTALAAMPTLAELGANHALHGVLMATNFFGINTIPIALNESDYARMWIQAATTMAS Sbjct 61 ATAYGTALAAMPTLAELGANHALHGVLMATNFFGINTIPIALNESDYARMWIQAATTMAS 120 Query 157 YQAVSTAAVAAAPQTTPAPQIVKANAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPF 216 YQAVSTAAVAAAPQTTPAPQIVKANAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPF Sbjct 121 YQAVSTAAVAAAPQTTPAPQIVKANAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPF 180 Query 217 INWLTNLPFLQAMFSGFDPWLPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFI 276 INWLTNLPFLQAMFSGFDPWLPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFI Sbjct 181 INWLTNLPFLQAMFSGFDPWLPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFI 240 Query 277 GADLAAAFASGNPATIAFTLMFTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAP 336 GADLAAAFASGNPATIAFTLMFTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAP Sbjct 241 GADLAAAFASGNPATIAFTLMFTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAP 300 Query 337 LAPLTLAPASAAGGFAGLSGLAGLVGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTA 396 LAPLTLAPASAAGGFAGLSGLAGLVGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTA Sbjct 301 LAPLTLAPASAAGGFAGLSGLAGLVGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTA 360 Query 397 VTAPTPPPGPPPPPVTAPPPVTGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSA 456 VTAPTPPPGPPPPPVTAPPPVTGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSA Sbjct 361 VTAPTPPPGPPPPPVTAPPPVTGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSA 420 Query 457 EAPAAAAAPEEQVQPQRRRRPKIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTH 516 EAPAAAAAPEEQVQPQRRRRPKIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTH Sbjct 421 EAPAAAAAPEEQVQPQRRRRPKIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTH 480 Query 517 KASPGQVAGLITLPNDAFGGSPRTPMMPGTWDTDSATRVE 556 KASPGQVAGLITLPNDAFGGSPRTPMMPGTWDTDSATRVE Sbjct 481 KASPGQVAGLITLPNDAFGGSPRTPMMPGTWDTDSATRVE 520 >gi|167968979|ref|ZP_02551256.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=577 Score = 996 bits (2576), Expect = 0.0, Method: Compositional matrix adjust. Identities = 513/515 (99%), Positives = 513/515 (99%), Gaps = 0/515 (0%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL Sbjct 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 Query 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT Sbjct 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 Query 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL Sbjct 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 Query 361 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA 420 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA Sbjct 361 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA 420 Query 421 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIK 480 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIK Sbjct 421 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIK 480 Query 481 QLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTT 515 QLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAG Sbjct 481 QLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGNN 515 >gi|289748739|ref|ZP_06508117.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289689326|gb|EFD56755.1| PPE family protein [Mycobacterium tuberculosis T92] Length=450 Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust. Identities = 450/450 (100%), Positives = 450/450 (100%), Gaps = 0/450 (0%) Query 107 MPTLAELGANHALHGVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVA 166 MPTLAELGANHALHGVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVA Sbjct 1 MPTLAELGANHALHGVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVA 60 Query 167 AAPQTTPAPQIVKANAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFL 226 AAPQTTPAPQIVKANAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFL Sbjct 61 AAPQTTPAPQIVKANAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFL 120 Query 227 QAMFSGFDPWLPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFAS 286 QAMFSGFDPWLPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFAS Sbjct 121 QAMFSGFDPWLPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFAS 180 Query 287 GNPATIAFTLMFTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPAS 346 GNPATIAFTLMFTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPAS Sbjct 181 GNPATIAFTLMFTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPAS 240 Query 347 AAGGFAGLSGLAGLVGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGP 406 AAGGFAGLSGLAGLVGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGP Sbjct 241 AAGGFAGLSGLAGLVGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGP 300 Query 407 PPPPVTAPPPVTGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPE 466 PPPPVTAPPPVTGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPE Sbjct 301 PPPPVTAPPPVTGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPE 360 Query 467 EQVQPQRRRRPKIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGL 526 EQVQPQRRRRPKIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGL Sbjct 361 EQVQPQRRRRPKIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGL 420 Query 527 ITLPNDAFGGSPRTPMMPGTWDTDSATRVE 556 ITLPNDAFGGSPRTPMMPGTWDTDSATRVE Sbjct 421 ITLPNDAFGGSPRTPMMPGTWDTDSATRVE 450 >gi|307082389|ref|ZP_07491559.1| PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308360037|gb|EFP48888.1| PPE family protein [Mycobacterium tuberculosis SUMu011] Length=555 Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/556 (97%), Positives = 538/556 (97%), Gaps = 1/556 (0%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL Sbjct 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 Query 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT Sbjct 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 Query 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL Sbjct 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 Query 361 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA 420 VGIPPSAPPVIPPVAAIAPSIPTP A PP PPPPPVTAPPPVTGA Sbjct 361 VGIPPSAPPVIPPVAAIAPSIPTPPQLQPQPRPHGRDRADAPPG-PPPPPVTAPPPVTGA 419 Query 421 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIK 480 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIK Sbjct 420 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIK 479 Query 481 QLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRT 540 QLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRT Sbjct 480 QLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRT 539 Query 541 PMMPGTWDTDSATRVE 556 PMMPGTWDTDSATRVE Sbjct 540 PMMPGTWDTDSATRVE 555 >gi|306801842|ref|ZP_07438510.1| PPE family protein [Mycobacterium tuberculosis SUMu008] gi|308351404|gb|EFP40255.1| PPE family protein [Mycobacterium tuberculosis SUMu008] Length=555 Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust. Identities = 544/556 (98%), Positives = 546/556 (99%), Gaps = 1/556 (0%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL Sbjct 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 Query 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT Sbjct 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 Query 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL Sbjct 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 Query 361 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA 420 VGIPPSAPPVIPPVAAIA P +P+P PTAVTAPTPPPGPPPPPVTAPPPVTGA Sbjct 361 VGIPPSAPPVIPPVAAIA-PSIPTPPNSSPSPGPTAVTAPTPPPGPPPPPVTAPPPVTGA 419 Query 421 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIK 480 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIK Sbjct 420 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIK 479 Query 481 QLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRT 540 QLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRT Sbjct 480 QLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRT 539 Query 541 PMMPGTWDTDSATRVE 556 PMMPGTWDTDSATRVE Sbjct 540 PMMPGTWDTDSATRVE 555 >gi|289760363|ref|ZP_06519741.1| PPE family protein [Mycobacterium tuberculosis T85] gi|289715927|gb|EFD79939.1| PPE family protein [Mycobacterium tuberculosis T85] Length=416 Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/416 (100%), Positives = 416/416 (100%), Gaps = 0/416 (0%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL Sbjct 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 Query 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT Sbjct 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 Query 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL Sbjct 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 Query 361 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPP 416 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPP Sbjct 361 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPP 416 >gi|323717087|gb|EGB26297.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=403 Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/403 (100%), Positives = 403/403 (100%), Gaps = 0/403 (0%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL Sbjct 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 Query 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT Sbjct 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 Query 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL Sbjct 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 Query 361 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPP 403 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPP Sbjct 361 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPP 403 >gi|306787247|ref|ZP_07425569.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004] gi|308336045|gb|EFP24896.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004] Length=401 Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/401 (100%), Positives = 401/401 (100%), Gaps = 0/401 (0%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL Sbjct 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 Query 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT Sbjct 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 Query 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL Sbjct 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 Query 361 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPT 401 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPT Sbjct 361 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPT 401 >gi|289764373|ref|ZP_06523751.1| PPE family protein [Mycobacterium tuberculosis GM 1503] gi|289711879|gb|EFD75895.1| PPE family protein [Mycobacterium tuberculosis GM 1503] Length=379 Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/379 (99%), Positives = 379/379 (100%), Gaps = 0/379 (0%) Query 178 VKANAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWL 237 +KANAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWL Sbjct 1 MKANAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWL 60 Query 238 PSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLM 297 PSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLM Sbjct 61 PSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLM 120 Query 298 FTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGL 357 FTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGL Sbjct 121 FTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGL 180 Query 358 AGLVGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPV 417 AGLVGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPV Sbjct 181 AGLVGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPV 240 Query 418 TGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRP 477 TGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRP Sbjct 241 TGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRP 300 Query 478 KIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGS 537 KIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGS Sbjct 301 KIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGS 360 Query 538 PRTPMMPGTWDTDSATRVE 556 PRTPMMPGTWDTDSATRVE Sbjct 361 PRTPMMPGTWDTDSATRVE 379 >gi|289748026|ref|ZP_06507404.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289688554|gb|EFD56042.1| PPE family protein [Mycobacterium tuberculosis 02_1987] Length=491 Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/488 (96%), Positives = 467/488 (96%), Gaps = 1/488 (0%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL Sbjct 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 Query 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT Sbjct 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 Query 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL Sbjct 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 Query 361 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA 420 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA Sbjct 361 VGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA 420 Query 421 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAA-AAAPEEQVQPQRRRRPKI 479 GIQSFGYLVGDLNSAAQARKAVGTGVRKKT P+ AP + RPKI Sbjct 421 GIQSFGYLVGDLNSAAQARKAVGTGVRKKTSGTRQRRGPSGRGGAPSNRFNRSGVGRPKI 480 Query 480 KQLGRGYE 487 KQLGRGY+ Sbjct 481 KQLGRGYD 488 >gi|289748027|ref|ZP_06507405.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289688555|gb|EFD56043.1| PPE family protein [Mycobacterium tuberculosis 02_1987] Length=335 Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/335 (99%), Positives = 334/335 (99%), Gaps = 0/335 (0%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL Sbjct 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 Query 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT Sbjct 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 Query 301 VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAA 335 VEAIGTIITDTIALVKTLLEQ LALLPAALPLLAA Sbjct 301 VEAIGTIITDTIALVKTLLEQPLALLPAALPLLAA 335 >gi|339296964|gb|AEJ49074.1| PPE family protein [Mycobacterium tuberculosis CCDC5180] Length=324 Score = 618 bits (1593), Expect = 1e-174, Method: Compositional matrix adjust. Identities = 321/321 (100%), Positives = 321/321 (100%), Gaps = 0/321 (0%) Query 236 WLPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFT 295 WLPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFT Sbjct 4 WLPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFT 63 Query 296 LMFTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLS 355 LMFTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLS Sbjct 64 LMFTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLS 123 Query 356 GLAGLVGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPP 415 GLAGLVGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPP Sbjct 124 GLAGLVGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPP 183 Query 416 PVTGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRR 475 PVTGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRR Sbjct 184 PVTGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRR 243 Query 476 RPKIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFG 535 RPKIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFG Sbjct 244 RPKIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFG 303 Query 536 GSPRTPMMPGTWDTDSATRVE 556 GSPRTPMMPGTWDTDSATRVE Sbjct 304 GSPRTPMMPGTWDTDSATRVE 324 >gi|15827976|ref|NP_302239.1| PPE-family protein [Mycobacterium leprae TN] gi|221230453|ref|YP_002503869.1| PPE-family protein [Mycobacterium leprae Br4923] gi|2344860|emb|CAB11462.1| hypothetical protein [Mycobacterium leprae] gi|13093529|emb|CAC30781.1| PPE-family protein [Mycobacterium leprae] gi|219933560|emb|CAR71923.1| PPE-family protein [Mycobacterium leprae Br4923] Length=572 Score = 588 bits (1515), Expect = 1e-165, Method: Compositional matrix adjust. Identities = 349/563 (62%), Positives = 392/563 (70%), Gaps = 23/563 (4%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 M+APIWMASPPEVHSALLS GPG GPLLV+AE W SLS YAE ADEL ALL V +W Sbjct 1 MSAPIWMASPPEVHSALLSRGPGSGPLLVAAEAWRSLSSVYAEMADELVALLVVVPVSSW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DG A YV A+ PYL WL QAS +SA MA ET ATAY T LA MPTLAEL AN H Sbjct 61 DGSAAEAYVIAYLPYLGWLRQASVDSAVMAAHYETMATAYITTLAMMPTLAELAANRTAH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 VL+ TNFFGINTIPIA NE DY RMW++AA M +YQ VST V +AP+ APQI+ + Sbjct 121 TVLVTTNFFGINTIPIARNEIDYVRMWVEAAIAMGTYQEVSTVVVDSAPEAIAAPQIMAS 180 Query 181 NAPTAASDEPN--------QVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSG 232 +A A+SD+P+ QVQ WLQWLQKIGYTDFYN ++QP I LTN PF Q MFSG Sbjct 181 DALEASSDQPSPTAPSQSPQVQNWLQWLQKIGYTDFYNTLVQPLITSLTNHPFFQGMFSG 240 Query 233 FDPWLPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATI 292 FDPWLPSLGNPL+FLSP NIAFALG PMDIGSYV +LSQTFAFIGADLAAAFASGNP TI Sbjct 241 FDPWLPSLGNPLSFLSPFNIAFALGTPMDIGSYVGYLSQTFAFIGADLAAAFASGNPVTI 300 Query 293 AFTLMFTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFA 352 FTL+FTT+EAIGTIITDTIALVKT++EQ+ LLP LPLL APLA +A A AAG FA Sbjct 301 GFTLLFTTIEAIGTIITDTIALVKTMIEQSFVLLPMILPLLTAPLA---VATAGAAGSFA 357 Query 353 GLSGLAGLVGIPPSAPPVIPPVAAIAPSIPTPTPTPAP-----APAPTAVTAPTPPPGPP 407 GLS LAGLVG+ P P PPVAA+AP +P PT A A + P Sbjct 358 GLSELAGLVGVAPPGLPSAPPVAAVAPVVPPSMPTLASIPTPTPMPAPAASTAPVVTPPG 417 Query 408 PPPVTAPPPVTGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEE 467 PPPVTAPP VTGAG++SFGYLVG L S AR VGT VR+++ PD EAP AAA P+E Sbjct 418 PPPVTAPPSVTGAGVESFGYLVGRLPST--ARGVVGTSVRQQSSAPDRIEAPDAAATPQE 475 Query 468 QVQPQRRRRPKIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLI 527 Q + + RRR K+ P PT S QGAGTLG AGT +AS G GL+ Sbjct 476 QARSRWRRRAKVTPFDSSGS-----PNPKAAPTASDQGAGTLGLAGTARQASSGPATGLV 530 Query 528 TLPNDAFGGSPRTPMMPGTWDTD 550 TL N F SPR PM+P TW D Sbjct 531 TLSNGTFSDSPRAPMLPRTWGAD 553 >gi|289756323|ref|ZP_06515701.1| PPE family protein [Mycobacterium tuberculosis EAS054] gi|289696910|gb|EFD64339.1| PPE family protein [Mycobacterium tuberculosis EAS054] Length=331 Score = 585 bits (1507), Expect = 9e-165, Method: Compositional matrix adjust. Identities = 310/310 (100%), Positives = 310/310 (100%), Gaps = 0/310 (0%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL Sbjct 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 Query 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT Sbjct 241 GNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTT 300 Query 301 VEAIGTIITD 310 VEAIGTIITD Sbjct 301 VEAIGTIITD 310 >gi|240167866|ref|ZP_04746525.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=566 Score = 545 bits (1404), Expect = 7e-153, Method: Compositional matrix adjust. Identities = 343/563 (61%), Positives = 398/563 (71%), Gaps = 22/563 (3%) Query 5 IWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTWDGPT 64 IW+A+PPEVHSALLSSGPGPGPLL SA W SLS+AYAETADELAA++A QA +W G + Sbjct 4 IWLAAPPEVHSALLSSGPGPGPLLESAAAWDSLSVAYAETADELAAVVAGAQADSWGGLS 63 Query 65 AAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALHGVLM 124 A YVAAH PYLAWL QAS +SAAMA Q+TAATAY A+AAMPTLAEL ANHA H VL Sbjct 64 AEEYVAAHVPYLAWLTQASTDSAAMAAHQQTAATAYAAAVAAMPTLAELAANHAAHAVLT 123 Query 125 ATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKANAPT 184 ATNFFGINTI IALNE+DY RMW+QAA M +Y AVSTAAV AAPQ PAP I+KA+A Sbjct 124 ATNFFGINTISIALNEADYVRMWVQAAAVMGTYHAVSTAAVVAAPQAAPAPPIMKADAEL 183 Query 185 --------AASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPW 236 ++SD +Q ++WL + YT FYNNVIQPF++WL NLPF Q MF+G DP+ Sbjct 184 ARAAAAGLSSSDPLHQFEQWLWQM----YTTFYNNVIQPFVDWLANLPFFQTMFAGIDPY 239 Query 237 LPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTL 296 L LGNPLT+LSP NIAFALGYPMDIG+YVA LSQTF FIGADLAAAFA+GNP TI FT+ Sbjct 240 LVILGNPLTYLSPLNIAFALGYPMDIGTYVALLSQTFTFIGADLAAAFATGNPVTIGFTI 299 Query 297 MFTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSG 356 +FT VEAIGT+ITDTIAL+KTLLEQT LL A +PLL APL P+ A G GL+ Sbjct 300 LFTAVEAIGTVITDTIALLKTLLEQTAVLLTAVVPLLTAPLLPIAAGAVLAPIGVKGLAA 359 Query 357 LAGLVGIPPSAPPVIPPVAAIAPSIPTPTPTPAPAPAP-TAVTAPTPPPGPPPPPVTAPP 415 +A + PP P PP+AA++ S PT TP AP TA PP P P Sbjct 360 VAAVPPPPPPVTPTTPPLAALSTSAPTSATTPIQAPVEVTAQAPTPGPPPPAPTAPPVSD 419 Query 416 PVTGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRR 475 G G+ +FGYL+G L+ A AR+ RKK PEPD+AEAPA A P+E+ +PQ R Sbjct 420 AALGGGMDNFGYLMGGLS--ADARRPTSASSRKKAPEPDTAEAPAVTATPQEKPRPQWRS 477 Query 476 RPKIKQLGRGYEYLDLDPETGHDPT------GSPQGAGTLGFAGTTHKASPGQVAGLITL 529 R K K+LGRGYEYLDL P+ DP+ QGA LGFAGTTH+A P VAGL TL Sbjct 478 RVKAKRLGRGYEYLDLGPD-ADDPSELTTSAAPEQGAAPLGFAGTTHRARPRPVAGLTTL 536 Query 530 PNDAFGGSPRTPMMPGTWDTDSA 552 P+D GSPR PM+P TW DSA Sbjct 537 PDDMSPGSPRVPMLPDTWGVDSA 559 >gi|339296965|gb|AEJ49075.1| PPE family protein [Mycobacterium tuberculosis CCDC5180] Length=241 Score = 469 bits (1208), Expect = 5e-130, Method: Compositional matrix adjust. Identities = 235/235 (100%), Positives = 235/235 (100%), Gaps = 0/235 (0%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH Sbjct 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA Sbjct 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 Query 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDP 235 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDP Sbjct 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDP 235 >gi|118463459|ref|YP_880574.1| PPE family protein [Mycobacterium avium 104] gi|118164746|gb|ABK65643.1| PPE family protein [Mycobacterium avium 104] Length=555 Score = 462 bits (1188), Expect = 8e-128, Method: Compositional matrix adjust. Identities = 329/559 (59%), Positives = 391/559 (70%), Gaps = 22/559 (3%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHS+LLS+GPGPGPLL +A W SLS+ YAE+ADEL LL AV+AG W Sbjct 4 MTAPIWMASPPEVHSSLLSAGPGPGPLLAAAAAWSSLSVQYAESADELVTLLGAVRAGDW 63 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DGPTA Y+AAH PYLAWLV+AS +SAA+A +QE AA AY ALAAMPTL EL ANHA H Sbjct 64 DGPTAGAYLAAHAPYLAWLVRASTDSAAVAAQQEVAAAAYTAALAAMPTLPELAANHAAH 123 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 VL ATNFFG+NTIPIA+NE+DYARMW+QAAT M +YQ V+ AA+AA P T PAP+++ A Sbjct 124 AVLTATNFFGVNTIPIAVNEADYARMWVQAATVMGTYQDVAAAALAATPHTEPAPRVMAA 183 Query 181 NAPT-----AASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDP 235 AP ++S P+ +WL WL+K G+ DFYN IQP I+ L N PF Q++FSGFDP Sbjct 184 AAPAATAAQSSSYPPDTQDQWLDWLEKTGFVDFYNRYIQPLIDQLMNNPFFQSLFSGFDP 243 Query 236 WLPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFT 295 WLPSLGNPL+FL+P NIAFALGYPMD GSY +L+Q F+F+ ADLAAAFASGNPATIA+T Sbjct 244 WLPSLGNPLSFLNPFNIAFALGYPMDFGSYFGYLAQMFSFVAADLAAAFASGNPATIAWT 303 Query 296 LMFTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLS 355 L+FTT+E IGT+ITDTIAL+KTLLEQ + L+PA LPLL ++ + L + GG AGL+ Sbjct 304 LLFTTIEVIGTVITDTIALIKTLLEQMIVLIPAILPLLT--VSVVPLVVPTLVGGLAGLT 361 Query 356 GLAGLVGIPPSAPPVIP-----PVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPP 410 GLAGL IP PP +P PVA P P P P+PAPAP +A P P P Sbjct 362 GLAGLHAIP--VPPFVPAPTLVPVALAPSPPPAPAPAPSPAPAPAPTSAAAPAAAAPGAP 419 Query 411 VTAPPPVTGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKT-PEPDSAEAPAAAAAPEEQV 469 P A + S YLVG L A AR+A GVR++ P++ EAP A A PEE+ Sbjct 420 PPTPSGPPVATLHSLAYLVGGLT--ADARRAANAGVRRREAAAPENVEAP-AVAQPEEES 476 Query 470 QPQRRRRPKIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITL 529 +RR R KQLGRGYEYLD +P T T S GA TLGFAGT + AGL Sbjct 477 TQRRRHRAAAKQLGRGYEYLDPEPST----TASQLGAPTLGFAGTAANRAAAAPAGLSAP 532 Query 530 PNDAFGGSPRTPMMPGTWD 548 D F +PR PMMP TWD Sbjct 533 VLDEFADAPRAPMMPATWD 551 >gi|212595932|gb|ACJ35535.1| PPE9 [Mycobacterium avium subsp. avium] Length=552 Score = 462 bits (1188), Expect = 1e-127, Method: Compositional matrix adjust. Identities = 329/559 (59%), Positives = 391/559 (70%), Gaps = 22/559 (3%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHS+LLS+GPGPGPLL +A W SLS+ YAE+ADEL LL AV+AG W Sbjct 1 MTAPIWMASPPEVHSSLLSAGPGPGPLLAAAAAWSSLSVQYAESADELVTLLGAVRAGDW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DGPTA Y+AAH PYLAWLV+AS +SAA+A +QE AA AY ALAAMPTL EL ANHA H Sbjct 61 DGPTAGAYLAAHAPYLAWLVRASTDSAAVAAQQEVAAAAYTAALAAMPTLPELAANHAAH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 VL ATNFFG+NTIPIA+NE+DYARMW+QAAT M +YQ V+ AA+AA P T PAP+++ A Sbjct 121 AVLTATNFFGVNTIPIAVNEADYARMWVQAATVMGTYQDVAAAALAATPHTEPAPRVMAA 180 Query 181 NAPT-----AASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDP 235 AP ++S P+ +WL WL+K G+ DFYN IQP I+ L N PF Q++FSGFDP Sbjct 181 AAPAATAAQSSSYPPDTQDQWLDWLEKTGFVDFYNRYIQPLIDQLMNNPFFQSLFSGFDP 240 Query 236 WLPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFT 295 WLPSLGNPL+FL+P NIAFALGYPMD GSY +L+Q F+F+ ADLAAAFASGNPATIA+T Sbjct 241 WLPSLGNPLSFLNPFNIAFALGYPMDFGSYFGYLAQMFSFVAADLAAAFASGNPATIAWT 300 Query 296 LMFTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLS 355 L+FTT+E IGT+ITDTIAL+KTLLEQ + L+PA LPLL ++ + L + GG AGL+ Sbjct 301 LLFTTIEVIGTVITDTIALIKTLLEQMIVLIPAILPLLT--VSVVPLVVPTLVGGLAGLT 358 Query 356 GLAGLVGIPPSAPPVIP-----PVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPP 410 GLAGL IP PP +P PVA P P P P+PAPAP +A P P P Sbjct 359 GLAGLHAIP--VPPFVPAPTLVPVALAPSPPPAPAPAPSPAPAPAPTSAAAPAAAAPGAP 416 Query 411 VTAPPPVTGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKT-PEPDSAEAPAAAAAPEEQV 469 P A + S YLVG L A AR+A GVR++ P++ EAP A A PEE+ Sbjct 417 PPTPSGPPVATLHSLAYLVGGLT--ADARRAANAGVRRREAAAPENVEAP-AVAQPEEES 473 Query 470 QPQRRRRPKIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITL 529 +RR R KQLGRGYEYLD +P T T S GA TLGFAGT + AGL Sbjct 474 TQRRRHRAAAKQLGRGYEYLDPEPST----TASQLGAPTLGFAGTAANRAAAAPAGLSAP 529 Query 530 PNDAFGGSPRTPMMPGTWD 548 D F +PR PMMP TWD Sbjct 530 VLDEFADAPRAPMMPATWD 548 >gi|336458670|gb|EGO37632.1| PPE-repeat containing protein [Mycobacterium avium subsp. paratuberculosis S397] Length=552 Score = 442 bits (1138), Expect = 6e-122, Method: Compositional matrix adjust. Identities = 326/558 (59%), Positives = 388/558 (70%), Gaps = 20/558 (3%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHS+LLS+GPGPGPLL +A W SLS+ YAE+ADEL LL AV+AG W Sbjct 1 MTAPIWMASPPEVHSSLLSAGPGPGPLLAAAAAWSSLSVQYAESADELVTLLGAVRAGDW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DGPTA Y+AAH PYLAWL +AS +SAA+A +QE AA AY ALAAMPTL EL ANHA H Sbjct 61 DGPTAGAYLAAHAPYLAWLARASTDSAAVAAQQEVAAAAYTAALAAMPTLPELAANHAAH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 VL ATNFFGINTIPIA+NE+DYARMW+QAAT M +YQ V+ AA+AA P T PAP+++ A Sbjct 121 AVLTATNFFGINTIPIAVNEADYARMWVQAATVMGTYQDVAAAALAATPHTEPAPRVMAA 180 Query 181 NAPT-----AASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDP 235 AP ++S P+ +WL WL+K G+ DFYN IQP I+ L N PF +++FSGFDP Sbjct 181 AAPAARAAQSSSYPPDTQDQWLDWLEKTGFVDFYNRYIQPLIDQLMNNPFFRSLFSGFDP 240 Query 236 WLPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFT 295 WLPSLGNPL+FL+P NIAFALGYPMD GSY +L+Q F+F+ ADLAAAFASGNPATIA+T Sbjct 241 WLPSLGNPLSFLNPFNIAFALGYPMDFGSYFGYLAQMFSFVAADLAAAFASGNPATIAWT 300 Query 296 LMFTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLS 355 L+FTT+E IGT+ITDTIAL+KTLLEQ + L+PA LPLL ++ + L + GG AGL+ Sbjct 301 LLFTTIEVIGTVITDTIALIKTLLEQMIVLIPAILPLLT--VSVVPLVVPTLVGGLAGLT 358 Query 356 GLAGLVGIPPSAPPVIP-----PVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPPPPP 410 GLAGL IP PP +P PVA P P P P+PAPAP +A P P P Sbjct 359 GLAGLHAIP--VPPFVPAPTLVPVALAPSPPPAPAPAPSPAPAPAPTSAAAPAAAAPGAP 416 Query 411 VTAPPPVTGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQ 470 P A + S YLVG L +A R A R++ P++ EAP A A PEE+ Sbjct 417 PPTPSGPPVATLHSLAYLVGGL-TADARRAASAGARRREAAAPENVEAP-AVAQPEEEST 474 Query 471 PQRRRRPKIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLP 530 +RR R KQLGRGYEYLD +P T T S GA TLGFAGT K + AGL Sbjct 475 QRRRHRAAAKQLGRGYEYLDPEPST----TASQLGAPTLGFAGTAAKRAAAAPAGLSAPV 530 Query 531 NDAFGGSPRTPMMPGTWD 548 D F +PR PMMP TWD Sbjct 531 LDEFADAPRAPMMPATWD 548 >gi|212596465|gb|ACJ35580.1| PPE9 [Mycobacterium intracellulare ATCC 13950] Length=452 Score = 422 bits (1085), Expect = 8e-116, Method: Compositional matrix adjust. Identities = 242/365 (67%), Positives = 286/365 (79%), Gaps = 15/365 (4%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHS LLSSGPGPGPLL SA W SLS+ YAETADEL ALL AVQAG+W Sbjct 1 MTAPIWMASPPEVHSTLLSSGPGPGPLLASAATWSSLSVEYAETADELTALLDAVQAGSW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DGP+AA Y AAH PYLAWL QASA+SA MA +Q+ AATAY ALAAMPT+ EL ANHA H Sbjct 61 DGPSAAEYAAAHAPYLAWLAQASADSATMAAQQDLAATAYTVALAAMPTMPELAANHAAH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 VL ATNFFGINTIPIA+ W+QAAT M++Y+ V+TAAVA AP PAP+++KA Sbjct 121 AVLTATNFFGINTIPIAV--------WVQAATVMSTYEGVATAAVATAPPAEPAPEVMKA 172 Query 181 NAPTAASDE-----PNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDP 235 AP A +++ P+ +W+ WL+K G+ DFYN IQP I+ L N PF Q+MFSGFDP Sbjct 173 TAPAATAEQSSSYPPDTQDQWMDWLEKTGFVDFYNRFIQPLIDQLMNNPFFQSMFSGFDP 232 Query 236 WLPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFT 295 WLPSLGNPL+FL+P NIAFALGYPMD GSY A+L Q F+F+ ADLAAAFASGNPATIA+T Sbjct 233 WLPSLGNPLSFLNPFNIAFALGYPMDFGSYFAYLGQMFSFVAADLAAAFASGNPATIAWT 292 Query 296 LMFTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLS 355 ++FTT+E IGT+ITDTIAL+KTLLEQ + L+P +PLL + PL + + GG AGL+ Sbjct 293 ILFTTIEVIGTVITDTIALIKTLLEQMIVLIPLIVPLLTVAVVPLVV--PTLIGGLAGLT 350 Query 356 GLAGL 360 GLAGL Sbjct 351 GLAGL 355 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 48/89 (54%), Positives = 56/89 (63%), Gaps = 2/89 (2%) Query 461 AAAAPEEQVQPQRRRRPKIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASP 520 A A PEE +RR+R K+ QLGRGYEY+DL+PE T S + A T+GFAGT + Sbjct 359 AVALPEEDATKKRRQRVKVSQLGRGYEYMDLEPEPAT--TASDRPAPTMGFAGTVPTKTA 416 Query 521 GQVAGLITLPNDAFGGSPRTPMMPGTWDT 549 AGL L D F PRTPMMPGTWDT Sbjct 417 AAPAGLSALVVDEFDDGPRTPMMPGTWDT 445 >gi|183982947|ref|YP_001851238.1| PPE family protein [Mycobacterium marinum M] gi|183176273|gb|ACC41383.1| PPE family protein [Mycobacterium marinum M] Length=569 Score = 396 bits (1017), Expect = 6e-108, Method: Compositional matrix adjust. Identities = 230/327 (71%), Positives = 260/327 (80%), Gaps = 5/327 (1%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMA+PPEVHSALLSSGPGPG LLV+A W SLSI YAE A+ELAALLAAVQAG W Sbjct 1 MTAPIWMAAPPEVHSALLSSGPGPGSLLVAAGEWTSLSITYAEAAEELAALLAAVQAGAW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DGPTA +YVAAH PYL WL+QASANSAAMA +Q+TAA AY ALAAMPTLAELGANH +H Sbjct 61 DGPTAEIYVAAHVPYLMWLIQASANSAAMAGQQQTAAAAYTAALAAMPTLAELGANHTIH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVS-----TAAVAAAPQTTPAP 175 L+ TNFFGINTIPIA+NE+DY RMWIQAA M YQ VS A A Sbjct 121 TGLVVTNFFGINTIPIAVNEADYVRMWIQAAAVMGGYQDVSATAVAAAPQPAPAPPIMNA 180 Query 176 QIVKANAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDP 235 A A AA P++ ++LQWL+ IGY D YN +I+PF++WL N+PFLQA+FSGFDP Sbjct 181 AAPAAAAAQAAELPPDRQSQFLQWLKDIGYVDLYNKLIKPFVDWLANIPFLQALFSGFDP 240 Query 236 WLPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFT 295 +L +LGNPLT+LSP NIAFALGYPMD +YV LSQTFAFIGADLAAAFASGNP TI T Sbjct 241 YLLTLGNPLTYLSPLNIAFALGYPMDFATYVTLLSQTFAFIGADLAAAFASGNPMTIGLT 300 Query 296 LMFTTVEAIGTIITDTIALVKTLLEQT 322 ++FT+VEAIGTIITDTIAL+KTLLEQT Sbjct 301 ILFTSVEAIGTIITDTIALLKTLLEQT 327 >gi|41408693|ref|NP_961529.1| hypothetical protein MAP2595 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397051|gb|AAS04912.1| hypothetical protein MAP_2595 [Mycobacterium avium subsp. paratuberculosis K-10] Length=585 Score = 389 bits (1000), Expect = 6e-106, Method: Compositional matrix adjust. Identities = 247/377 (66%), Positives = 296/377 (79%), Gaps = 9/377 (2%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHS+LLS+GPGPGPLL +A W SLS+ YAE+ADEL LL AV+AG W Sbjct 1 MTAPIWMASPPEVHSSLLSAGPGPGPLLAAAAAWSSLSVQYAESADELVTLLGAVRAGDW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DGPTA Y+AAH PYLAWL +AS +SAA+A +QE AA AY ALAAMPTL EL ANHA H Sbjct 61 DGPTAGAYLAAHAPYLAWLARASTDSAAVAAQQEVAAAAYTAALAAMPTLPELAANHAAH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 VL ATNFFGINTIPIA+NE+DYARMW+QAAT M +YQ V+ AA+AA P T PAP+++ A Sbjct 121 AVLTATNFFGINTIPIAVNEADYARMWVQAATVMGTYQDVAAAALAATPHTEPAPRVMAA 180 Query 181 NAPT-----AASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDP 235 AP ++S P+ +WL WL+K G+ DFYN IQP I+ L N PF +++FSGFDP Sbjct 181 AAPAARAAQSSSYPPDTQDQWLDWLEKTGFVDFYNRYIQPLIDQLMNNPFFRSLFSGFDP 240 Query 236 WLPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFT 295 WLPSLGNPL+FL+P NIAFALGYPMD GSY +L+Q F+F+ ADLAAAFASGNPATIA+T Sbjct 241 WLPSLGNPLSFLNPFNIAFALGYPMDFGSYFGYLAQMFSFVAADLAAAFASGNPATIAWT 300 Query 296 LMFTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLS 355 L+FTT+E IGT+ITDTIAL+KTLLEQ + L+PA LPLL ++ + L + GG AGL+ Sbjct 301 LLFTTIEVIGTVITDTIALIKTLLEQMIVLIPAILPLLT--VSVVPLVVPTLVGGLAGLT 358 Query 356 GLAGLVGIPPSAPPVIP 372 GLAGL IP PP +P Sbjct 359 GLAGLHAIP--VPPFVP 373 >gi|333991826|ref|YP_004524440.1| PPE family protein [Mycobacterium sp. JDM601] gi|333487794|gb|AEF37186.1| PPE family protein [Mycobacterium sp. JDM601] Length=548 Score = 378 bits (971), Expect = 1e-102, Method: Compositional matrix adjust. Identities = 230/338 (69%), Positives = 272/338 (81%), Gaps = 5/338 (1%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIW+ASPPEVHS LLS+GPG GPLL SA W +LS YAE ADEL ALL AVQAG W Sbjct 1 MTAPIWIASPPEVHSTLLSAGPGAGPLLASAAAWSALSSEYAEIADELTALLGAVQAGAW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 GP+A Y+ A+TPYLAWL+ A+A+S+ MA +Q+ AA+AY ALAAMPT+AEL ANH H Sbjct 61 QGPSAEAYLTANTPYLAWLIHAAADSSVMAAQQQVAASAYNAALAAMPTMAELAANHVTH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 VL+ATNFFG+NTIPIALNE+DY RMW+QAAT MASYQAV+ AAVA++PQ APQI KA Sbjct 121 AVLVATNFFGVNTIPIALNEADYGRMWLQAATVMASYQAVAGAAVASSPQAVAAPQIAKA 180 Query 181 NAPTAASDE-----PNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDP 235 + +++ P++ + ++WLQ GYTDFYNNV+QP IN L P+LQ+MF+GFDP Sbjct 181 ESARSSAASQPQLPPDRQNDIMEWLQNSGYTDFYNNVLQPMINELAANPYLQSMFAGFDP 240 Query 236 WLPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFT 295 WLP LGNPL+F SP NIAFALGYPMD GS+ A+LSQTFAFI ADLAAAFASGNPATIA T Sbjct 241 WLPVLGNPLSFFSPYNIAFALGYPMDFGSFAAYLSQTFAFIAADLAAAFASGNPATIAAT 300 Query 296 LMFTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLL 333 L+FT VEAIGTIITD IAL+KTLLEQ + L+P LP+L Sbjct 301 LLFTAVEAIGTIITDVIALLKTLLEQAIVLIPVMLPML 338 >gi|254774205|ref|ZP_05215721.1| PPE family protein [Mycobacterium avium subsp. avium ATCC 25291] Length=356 Score = 367 bits (941), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 236/358 (66%), Positives = 284/358 (80%), Gaps = 7/358 (1%) Query 7 MASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTWDGPTAA 66 MASPPEVHS+LLS+GPGPGPLL +A W SLS+ YAE+ADEL LL AV+AG WDGPTA Sbjct 1 MASPPEVHSSLLSAGPGPGPLLAAAAAWSSLSVQYAESADELVTLLGAVRAGDWDGPTAG 60 Query 67 VYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALHGVLMAT 126 Y+AAH PYLAWLV+AS +SAA+A +QE AA AY ALAAMPTL EL ANHA H VL AT Sbjct 61 AYLAAHAPYLAWLVRASTDSAAVAAQQEVAAAAYTAALAAMPTLPELAANHAAHAVLTAT 120 Query 127 NFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKANAPT-- 184 NFFG+NTIPIA+NE+DYARMW+QAAT M +YQ V+ AA+AA P T PAP+++ A AP Sbjct 121 NFFGVNTIPIAVNEADYARMWVQAATVMGTYQDVAAAALAATPHTEPAPRVMAAAAPAAT 180 Query 185 ---AASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSLG 241 ++S P+ +WL WL+K G+ DFYN IQP I+ L N PF Q++FSGFDPWLPSLG Sbjct 181 AAQSSSYPPDTQDQWLDWLEKTGFVDFYNRYIQPLIDQLMNNPFFQSLFSGFDPWLPSLG 240 Query 242 NPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTTV 301 NPL+FL+P NIAFALGYPMD GSY +L+Q F+F+ ADLAAAFASGNPATIA+TL+FTT+ Sbjct 241 NPLSFLNPFNIAFALGYPMDFGSYFGYLAQMFSFVAADLAAAFASGNPATIAWTLLFTTI 300 Query 302 EAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAG 359 E IGT+ITDTIAL+KTLLEQ + L+PA LPLL ++ + L + GG AGL+GLAG Sbjct 301 EVIGTVITDTIALIKTLLEQMIVLIPAILPLLT--VSVVPLVVPTLVGGLAGLTGLAG 356 >gi|296170084|ref|ZP_06851686.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895251|gb|EFG74962.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=405 Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 240/370 (65%), Positives = 280/370 (76%), Gaps = 12/370 (3%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIW+ASPPEVHSALLSSGPGPG LL +A W SLS YA AD+LAALL A+Q+G+W Sbjct 1 MTAPIWLASPPEVHSALLSSGPGPGSLLAAAAAWGSLSAEYAGAADDLAALLGAMQSGSW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 +GPTA VAAH PYLAWL +ASA+ AAMA R E+AATAY ALAAMPTL+EL ANHA H Sbjct 61 EGPTAQSCVAAHAPYLAWLARASADGAAMAVRHESAATAYSAALAAMPTLSELAANHATH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVK- 179 L+ATNF G+NTIPIALNE+DYARMW+QAAT M +YQ V+TAAVA AP T PAP+++ Sbjct 121 AALVATNFLGLNTIPIALNEADYARMWVQAATVMTTYQGVATAAVATAPPTEPAPRVMTA 180 Query 180 ------ANAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGF 233 + AP + D + V L WL +IG+TDFYN IQP I+ L N P A+FSGF Sbjct 181 DAPAAASVAPASPPDRQDAV---LDWLDRIGFTDFYNKFIQPLIDRLLNNPIFSALFSGF 237 Query 234 DPWLPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIA 293 DPWLP LGNPL+FL+P NIAFALGYPMD GSY A+L+QTFAFI ADLAAAFASGNPATIA Sbjct 238 DPWLPVLGNPLSFLNPFNIAFALGYPMDFGSYFAYLAQTFAFIAADLAAAFASGNPATIA 297 Query 294 FTLMFTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAG 353 +TL+FT VEAIGTIITDTIAL+KTLLEQ + + L + + L + GG AG Sbjct 298 WTLLFTAVEAIGTIITDTIALLKTLLEQMIV--LIPVLLPLLTVTVVPLVVPTLVGGLAG 355 Query 354 LSGLAGLVGI 363 L+ LAGL I Sbjct 356 LTSLAGLHAI 365 >gi|289568160|ref|ZP_06448387.1| predicted protein [Mycobacterium tuberculosis T17] gi|289756322|ref|ZP_06515700.1| PPE family protein [Mycobacterium tuberculosis EAS054] gi|308371626|ref|ZP_07425568.2| hypothetical protein TMDG_01730 [Mycobacterium tuberculosis SUMu004] gi|289541913|gb|EFD45562.1| predicted protein [Mycobacterium tuberculosis T17] gi|289696909|gb|EFD64338.1| PPE family protein [Mycobacterium tuberculosis EAS054] gi|308336148|gb|EFP24999.1| hypothetical protein TMDG_01730 [Mycobacterium tuberculosis SUMu004] Length=160 Score = 320 bits (820), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 159/160 (99%), Positives = 160/160 (100%), Gaps = 0/160 (0%) Query 397 VTAPTPPPGPPPPPVTAPPPVTGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSA 456 +TAPTPPPGPPPPPVTAPPPVTGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSA Sbjct 1 MTAPTPPPGPPPPPVTAPPPVTGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSA 60 Query 457 EAPAAAAAPEEQVQPQRRRRPKIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTH 516 EAPAAAAAPEEQVQPQRRRRPKIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTH Sbjct 61 EAPAAAAAPEEQVQPQRRRRPKIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTH 120 Query 517 KASPGQVAGLITLPNDAFGGSPRTPMMPGTWDTDSATRVE 556 KASPGQVAGLITLPNDAFGGSPRTPMMPGTWDTDSATRVE Sbjct 121 KASPGQVAGLITLPNDAFGGSPRTPMMPGTWDTDSATRVE 160 >gi|323717247|gb|EGB26456.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=146 Score = 296 bits (757), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 145/146 (99%), Positives = 146/146 (100%), Gaps = 0/146 (0%) Query 411 VTAPPPVTGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQ 470 +TAPPPVTGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQ Sbjct 1 MTAPPPVTGAGIQSFGYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQ 60 Query 471 PQRRRRPKIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLP 530 PQRRRRPKIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLP Sbjct 61 PQRRRRPKIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLP 120 Query 531 NDAFGGSPRTPMMPGTWDTDSATRVE 556 NDAFGGSPRTPMMPGTWDTDSATRVE Sbjct 121 NDAFGGSPRTPMMPGTWDTDSATRVE 146 >gi|183981440|ref|YP_001849731.1| PPE family protein [Mycobacterium marinum M] gi|183174766|gb|ACC39876.1| PPE family protein [Mycobacterium marinum M] Length=527 Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 239/578 (42%), Positives = 297/578 (52%), Gaps = 84/578 (14%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHSALLSSGPGPGPLL +A W LS YA A+EL A+L AVQAG W Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLSAAAAWSQLSNEYASAANELTAMLGAVQAGPW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 +G +A YVAAH PY+AWL+QAS ++ A + ETAA AY TALAAMPTL EL NH +H Sbjct 61 EGSSAEQYVAAHLPYVAWLMQASVDTTQAAAQLETAAAAYTTALAAMPTLPELATNHTIH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 L ATNFFGINTIPI LNE+DY RMWIQAATTM++YQAVS A+A+ PQT PAP I+K+ Sbjct 121 AALTATNFFGINTIPITLNEADYVRMWIQAATTMSTYQAVSGTALASTPQTAPAPYILKS 180 Query 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINW------LTNLPFLQAMFSGFD 234 NA T S P + + L L D + +NW + + + + +G Sbjct 181 NAQTEDSQPPVEGSDPLDSL----VADILRAITDGRVNWDPVSRTVNGIEYEEYTDAGDP 236 Query 235 PWLPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAF 294 W + L F S FA P D + + F + F F P I Sbjct 237 VWW--VVRALEF-SQDFRTFARLLPTDPQAALQFYGELFLF-----------DYPVHIPQ 282 Query 295 TLMFTTVEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGL 354 L T L Q+ LL AL + L +T GFAGL Sbjct 283 LL--------------------TWLSQSPQLLAVALGQAVSGLGAVT--------GFAGL 314 Query 355 SGLA----GLVGI---PPSAPPVIPPVAAIAPSIPTPTPTPAPAPAPTAVTAPTPPPGPP 407 +GLA G V P +AP + PV ++AP++ TP AP + TAP P Sbjct 315 AGLAAQPIGTVASALGPVAAPADMLPVTSMAPTVTTPV------AAPVSATAPAPATALT 368 Query 408 PPPVTAPPPVTGAGIQSFGYLVG---DLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAA 464 PP G S+ YL+G + + + +KKTPEPD+A A AA Sbjct 369 AGGPPPVPPAAGGAGFSYPYLIGGGPSIGFGSGMSTSASASAKKKTPEPDTAAAAAARER 428 Query 465 PEEQVQPQRRRRPKIKQLGRGYEYLDL--DPETGHDP--------TGSPQGAGTLGFAGT 514 + + + R G G E++D+ DP+ G P S GAG +G AGT Sbjct 429 ARARRRRRATLR------GYGDEFMDIEVDPDWGAPPGEGPGASTVASDHGAGPVGIAGT 482 Query 515 THKASPGQVAGLITLPNDAFGGSPRTPMMPGTWDTDSA 552 H S AGL TL D F G PR PM+PGTWD D A Sbjct 483 VHTGSVTPAAGLTTLGGDDFDGEPRMPMLPGTWDPDGA 520 >gi|289760362|ref|ZP_06519740.1| PPE family protein [Mycobacterium tuberculosis T85] gi|289715926|gb|EFD79938.1| PPE family protein [Mycobacterium tuberculosis T85] Length=129 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 127/129 (99%), Positives = 128/129 (99%), Gaps = 0/129 (0%) Query 428 LVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIKQLGRGYE 487 + GDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIKQLGRGYE Sbjct 1 MSGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAAAAPEEQVQPQRRRRPKIKQLGRGYE 60 Query 488 YLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRTPMMPGTW 547 YLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRTPMMPGTW Sbjct 61 YLDLDPETGHDPTGSPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRTPMMPGTW 120 Query 548 DTDSATRVE 556 DTDSATRVE Sbjct 121 DTDSATRVE 129 >gi|240171483|ref|ZP_04750142.1| PPE-family protein [Mycobacterium kansasii ATCC 12478] Length=535 Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 228/576 (40%), Positives = 290/576 (51%), Gaps = 85/576 (14%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAP+W+ASPPEVHSALL+SGPGP PLL +A GW SLS YA A EL LLAAVQAG W Sbjct 1 MTAPVWLASPPEVHSALLNSGPGPEPLLTAAAGWSSLSDEYAAVAAELGTLLAAVQAGVW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 GP+A +VAA+ PYLAWL QASA++A ATR ET A AY ALAAMPTL EL ANHA H Sbjct 61 RGPSADAFVAAYGPYLAWLAQASADTATAATRHETLAAAYTAALAAMPTLPELAANHASH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 L+ATNFFGINTIPIALNE+DY RMWIQAATTMA+YQA+S +AV + PQT PAP I+K+ Sbjct 121 AGLVATNFFGINTIPIALNEADYLRMWIQAATTMATYQAISGSAVTSIPQTGPAPPILKS 180 Query 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSL 240 N P S + G+ +N+I L+ + G W P+ Sbjct 181 NTPAQESGKAGDS----------GHATPIDNLIA---------EILKVISGGRIIWDPAN 221 Query 241 GNPLTFLSPANIAFALGYPMDI----GSYVAFLSQTFAFIGADLAAAFASGNPATIAFTL 296 G G P D G + +L++ F F G + L Sbjct 222 GT------------LNGLPYDAYTNPGQPIWWLARALEF--------FQDGEE---FWRL 258 Query 297 MFTT-VEAIGTIITDTIALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLS 355 +FT V A + + + T + Q + L + LLA L T+A AA GFAGL+ Sbjct 259 LFTNPVAAFEFLFGILVFDLPTHIMQIVTWLAQSPQLLAVALGQ-TIATLGAATGFAGLA 317 Query 356 GLAG--LVGIPPSAP------PVIPPVAAIAPSI----PTPTPTPAPAPAPTAVTAPTPP 403 GL + IP P P+ P A IAP++ + T A + A TP Sbjct 318 GLTATQIAAIPVPGPEPVLMLPMTLPGAGIAPTLSTATASATAPAAAPAPAAGIVASTPA 377 Query 404 PGPPPPPVTAPPPVTGAGIQSF-GYLVGDLNSAAQARKAVGTGVRKKTPEPDSAEAPAAA 462 P P AGI+ F ++VG + +R + T R K P DSA A AAA Sbjct 378 PTP------------AAGIEGFPPFVVGGPTIGSDSR--LSTRARTKEPATDSAAAAAAA 423 Query 463 AAPEEQVQP----------QRRRRPKIKQLGRGYEYLDLDPETGHDPTGSPQGAGTLGFA 512 A + + +R R + ++ + P+ S GAG LG Sbjct 424 QASDRREARARRRRRTPAGERGHRDEFAEMELDGDLAAPRPDEQQVSGASAWGAGPLGSR 483 Query 513 GTTHKASPGQVAGLITLPNDAFGGSPRTPMMPGTWD 548 GT + + AG TL G R PM+PGTW+ Sbjct 484 GTARTQTLVEAAGFATLDGSGLGDGARMPMIPGTWN 519 >gi|289748258|ref|ZP_06507636.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289688845|gb|EFD56274.1| PPE family protein [Mycobacterium tuberculosis T92] Length=410 Score = 243 bits (619), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 124/187 (67%), Positives = 144/187 (78%), Gaps = 0/187 (0%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIW ASPPEVHSALLS+GPGP L +A W SLS YA A EL A+LAAVQ G W Sbjct 1 MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 +GP+A YVAAH PYLAWL ++SA+SA +AT+ E TAY +ALAAMPTL EL ANH H Sbjct 61 EGPSAEAYVAAHLPYLAWLTKSSADSARLATQHEVMTTAYASALAAMPTLTELAANHTSH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 VL+ TNFFGINTIPIALNE+DYARMWIQAATTM+ Y+ S AA+A+APQTTPAP + Sbjct 121 AVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEGTSDAALASAPQTTPAPVLFNG 180 Query 181 NAPTAAS 187 A A++ Sbjct 181 GAGVASA 187 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 27/47 (58%), Positives = 32/47 (69%), Gaps = 0/47 (0%) Query 502 SPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRTPMMPGTWD 548 S +GAG LGFAGT K S G+ AGL TL FGGSP PM+P +W+ Sbjct 355 SDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPMVPASWE 401 >gi|340628712|ref|YP_004747164.1| ppe family protein [Mycobacterium canettii CIPT 140010059] gi|340006902|emb|CCC46091.1| ppe family protein [Mycobacterium canettii CIPT 140010059] Length=398 Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 124/187 (67%), Positives = 144/187 (78%), Gaps = 0/187 (0%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIW ASPPEVHSALLS+GPGP L +A W SLS YA A EL A+LAAVQ G W Sbjct 1 MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 +GP+A YVAAH PYLAWL ++SA+SA +AT+ E TAY +ALAAMPTL EL ANH H Sbjct 61 EGPSAEAYVAAHLPYLAWLTKSSADSARLATQHEVMTTAYASALAAMPTLTELAANHTSH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 VL+ TNFFGINTIPIALNE+DYARMWIQAATTM+ Y+ S AA+A+APQTTPAP + Sbjct 121 AVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEGTSDAALASAPQTTPAPVLFNG 180 Query 181 NAPTAAS 187 A A++ Sbjct 181 GAGVASA 187 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/47 (56%), Positives = 32/47 (69%), Gaps = 0/47 (0%) Query 502 SPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRTPMMPGTWD 548 S +GAG LGFAGT K S G+ AGL TL FGG+P PM+P +W+ Sbjct 343 SERGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGNPSVPMVPASWE 389 >gi|240168498|ref|ZP_04747157.1| PPE family protein, PPE4 [Mycobacterium kansasii ATCC 12478] Length=420 Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 125/195 (65%), Positives = 145/195 (75%), Gaps = 0/195 (0%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAP+W+ASPPEVHS+LLSSGPGPGPLLV+A W S+S YA A+EL ALL VQ G W Sbjct 1 MTAPVWIASPPEVHSSLLSSGPGPGPLLVAAASWTSISAEYASVAEELTALLGGVQIGAW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 GP+A V+ AAH PYLAWL++ASA+SA +A + E AATAY ALAAMPTL EL ANHA+H Sbjct 61 RGPSAEVFAAAHVPYLAWLLRASADSAGVAAQHEVAATAYTGALAAMPTLPELAANHAVH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 VL+ATNFFGINTIPIALNE DY RMWIQAAT M+ Y A A+A+ P TPAP +VK Sbjct 121 AVLLATNFFGINTIPIALNEGDYLRMWIQAATAMSIYHAAVDTALASVPHATPAPPLVKP 180 Query 181 NAPTAASDEPNQVQE 195 +A VQ Sbjct 181 GVGSAGDAAATSVQS 195 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 21/47 (45%), Positives = 26/47 (56%), Gaps = 0/47 (0%) Query 502 SPQGAGTLGFAGTTHKASPGQVAGLITLPNDAFGGSPRTPMMPGTWD 548 S +GA LGF GT K + G+ GL L + G R PM+P TWD Sbjct 360 SARGAAALGFPGTAGKEAAGEPGGLTRLGDQESGDVARAPMLPATWD 406 >gi|296167589|ref|ZP_06849914.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897132|gb|EFG76743.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=311 Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 150/268 (56%), Positives = 179/268 (67%), Gaps = 22/268 (8%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAP+WMASPPEVHS LLS+GPGPGPLL +A W SLS YA A EL +L QAG W Sbjct 1 MTAPVWMASPPEVHSTLLSAGPGPGPLLAAAGAWTSLSAEYATAAAELTGVLGETQAGAW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 GPT A Y+AAH PYLAWL QASA+SA +A + E AA AY ALAAMPTL EL ANHA+H Sbjct 61 QGPTGAQYLAAHVPYLAWLQQASADSAGVAAQHEVAAAAYTAALAAMPTLGELAANHAVH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVK- 179 GVL+ATNFFG+NTIPIA+NE+DYARMW+QAAT M +YQA S AA+A+AP++TPAP IV+ Sbjct 121 GVLVATNFFGVNTIPIAVNEADYARMWVQAATVMGAYQATSGAALASAPRSTPAPSIVRP 180 Query 180 ------ANAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLP-FLQAMFSG 232 +A TA + N Q +Q L K DF+ N+ Q N+ NLP FL A Sbjct 181 GGDANTLSANTAQNTPGNWWQNLIQQLSKF-LQDFFQNIQQMLQNFSANLPAFLAA---- 235 Query 233 FDPWLPSLGNPLTFLSPANIAF-ALGYP 259 PL F + F A+G+P Sbjct 236 --------NGPLLFFVAYQVFFNAVGWP 255 >gi|342859230|ref|ZP_08715884.1| hypothetical protein MCOL_10138 [Mycobacterium colombiense CECT 3035] gi|342133471|gb|EGT86674.1| hypothetical protein MCOL_10138 [Mycobacterium colombiense CECT 3035] Length=488 Score = 236 bits (602), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 146/262 (56%), Positives = 175/262 (67%), Gaps = 22/262 (8%) Query 7 MASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTWDGPTAA 66 MASPPEVHSALLS+GPGPGPLL +A W SLS YA A EL+ LL QAG W+GP+A Sbjct 1 MASPPEVHSALLSAGPGPGPLLAAAGAWTSLSTQYASAAAELSGLLGEAQAGAWEGPSAE 60 Query 67 VYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALHGVLMAT 126 YVAAH PYLAWL QAS +SA A +QE AATAY ALAAMPTLAEL NH +H VL+ T Sbjct 61 QYVAAHLPYLAWLQQASVDSAGAAAQQEVAATAYTAALAAMPTLAELATNHTVHAVLVGT 120 Query 127 NFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIV------KA 180 NFFGINTIPIA+NE+DYARMW+QAATTM +YQAVS +A+AAAP+T AP IV + Sbjct 121 NFFGINTIPIAVNEADYARMWVQAATTMGTYQAVSGSALAAAPRTMAAPAIVNPGGQINS 180 Query 181 NAPTAASDEP-NQVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLP-FLQAMFSGFDPWLP 238 A A + P + Q ++Q L K + DF+ N+ Q N+ +NLP FL A Sbjct 181 LASNATQNSPGDWWQNFIQQLSKF-FQDFFQNIQQMLQNFFSNLPAFLAA---------- 229 Query 239 SLGNPLTFLSPANIAF-ALGYP 259 PL F + F A+G+P Sbjct 230 --NGPLLFFVAYQVFFNAVGWP 249 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/78 (43%), Positives = 43/78 (56%), Gaps = 11/78 (14%) Query 487 EYLDLDPETGHDPTGSPQ-----------GAGTLGFAGTTHKASPGQVAGLITLPNDAFG 535 E+ D+D + G P + GAGTLGFAGTT + Q AGL L +D FG Sbjct 400 EFADMDSDFGVPPDFGDEEELAAAVASAQGAGTLGFAGTTQRQKAFQAAGLTKLADDDFG 459 Query 536 GSPRTPMMPGTWDTDSAT 553 G PR PM+PGTW+ ++ Sbjct 460 GGPRMPMVPGTWEHEAGN 477 >gi|240173305|ref|ZP_04751963.1| PPE family protein, PPE3 [Mycobacterium kansasii ATCC 12478] Length=523 Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 130/186 (70%), Positives = 145/186 (78%), Gaps = 0/186 (0%) Query 4 PIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTWDGP 63 P+WMASPPEVHSALLSSGPGPG LL +A W +LS Y ADEL +L AVQ G W+GP Sbjct 3 PVWMASPPEVHSALLSSGPGPGSLLSAAAAWSALSAEYGTAADELMVVLGAVQGGAWEGP 62 Query 64 TAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALHGVL 123 +A YVAAH PYL WL+QA SAA A R ET A AY +AL AMPTLAEL ANHA+HGVL Sbjct 63 SAERYVAAHVPYLMWLMQAGTVSAAAAARHETVAAAYSSALGAMPTLAELAANHAIHGVL 122 Query 124 MATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKANAP 183 +ATNFFGINTIPIALNE+DY RMWIQAATTMA+Y+AVS AAVA+ PQT+PAPQIV A A Sbjct 123 VATNFFGINTIPIALNEADYVRMWIQAATTMATYEAVSGAAVASTPQTSPAPQIVTAEAD 182 Query 184 TAASDE 189 E Sbjct 183 DGHDHE 188 >gi|254818900|ref|ZP_05223901.1| PPE family protein [Mycobacterium intracellulare ATCC 13950] Length=217 Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 134/219 (62%), Positives = 170/219 (78%), Gaps = 7/219 (3%) Query 147 WIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKANAPTAASDE-----PNQVQEWLQWLQ 201 W+QAAT M++Y+ V+TAAVA AP PAP+++KA AP A +++ P+ +W+ WL+ Sbjct 1 WVQAATVMSTYEGVATAAVATAPPAEPAPEVMKATAPAATAEQSSSYPPDTQDQWMDWLE 60 Query 202 KIGYTDFYNNVIQPFINWLTNLPFLQAMFSGFDPWLPSLGNPLTFLSPANIAFALGYPMD 261 K G+ DFYN IQP I+ L N PF Q+MFSGFDPWLPSLGNPL+FL+P NIAFALGYPMD Sbjct 61 KTGFVDFYNRFIQPLIDQLMNNPFFQSMFSGFDPWLPSLGNPLSFLNPFNIAFALGYPMD 120 Query 262 IGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLMFTTVEAIGTIITDTIALVKTLLEQ 321 GSY A+L Q F+F+ ADLAAAFASGNPATIA+T++FTT+E IGT+ITDTIAL+KTLLEQ Sbjct 121 FGSYFAYLGQMFSFVAADLAAAFASGNPATIAWTILFTTIEVIGTVITDTIALIKTLLEQ 180 Query 322 TLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSGLAGL 360 + L+P +PLL + PL + + GG AGL+GLAGL Sbjct 181 MIVLIPLIVPLLTVAVVPLVV--PTLIGGLAGLTGLAGL 217 >gi|296167571|ref|ZP_06849908.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897137|gb|EFG76747.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=354 Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 178/364 (49%), Positives = 217/364 (60%), Gaps = 51/364 (14%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHSALLSSGPGP LL +A W LS YA A +L+ +LAA QAG+W Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPASLLAAAGAWSELSAEYASAAAQLSGVLAAAQAGSW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 GP+A YVAAH PYLAWL +ASA+SAA A + ETAA AY ALA MPTL EL ANHA+H Sbjct 61 QGPSAESYVAAHAPYLAWLTRASADSAAAAAQHETAAVAYTAALATMPTLPELAANHAVH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 G L+ATNFFG+NT+PIALNE+DYARMW+QAA TM +YQAVSTAAVA+ PQ PAPQIVK+ Sbjct 121 GALVATNFFGVNTVPIALNEADYARMWVQAAGTMTTYQAVSTAAVASTPQPEPAPQIVKS 180 Query 181 NAPTAASDEPNQVQEWLQWLQKIGYTDFYNNVIQPFI-NWLTNLPFLQAMFSGFDPWLPS 239 A A+ D V + NN + FI N L NL G + W P+ Sbjct 181 AA--ASHDSGGDVHD-----------PTINNPLDQFIANILKNL--------GIN-WDPA 218 Query 240 LG--NPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAAAFASGNPATIAFTLM 297 G N L + + N G P+ L + F G L NPA +AF + Sbjct 219 QGTVNGLPYDAYTNA----GEPLFWVVRALELLEDFQQFGYYLV-----HNPA-LAFQYI 268 Query 298 FTTVEAIGTIITDT-IALVKTLLEQTLALLPAALPLLAAPLAPLTLAPASAAGGFAGLSG 356 + ++ D +++ + Q P L AP L +AP A GGFAGL+G Sbjct 269 ------VQLMLFDWPTHILEIFMSQ---------PELLAPAVLLAVAPFGAVGGFAGLAG 313 Query 357 LAGL 360 LAG+ Sbjct 314 LAGI 317 >gi|41409835|ref|NP_962671.1| hypothetical protein MAP3737 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398667|gb|AAS06287.1| hypothetical protein MAP_3737 [Mycobacterium avium subsp. paratuberculosis K-10] Length=504 Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 127/185 (69%), Positives = 148/185 (80%), Gaps = 0/185 (0%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAP+WMASPPE+HSALLSSGPGPGPLL +A W SLS YA ADEL A LAAVQAG W Sbjct 1 MTAPVWMASPPEIHSALLSSGPGPGPLLEAAAAWSSLSAEYASAADELTATLAAVQAGPW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 +GPT YVAAH PYLAWL Q+SA++A A + E AA+AY ALA MPTL EL NHA H Sbjct 61 EGPTTEAYVAAHAPYLAWLDQSSADAAGEAAQHEIAASAYTVALATMPTLPELATNHATH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 L+ATNFFGINTIPIALNE+DYARMW+QAATTM++YQ VST+ +AAAP+++ AP IVK+ Sbjct 121 AALVATNFFGINTIPIALNEADYARMWVQAATTMSTYQTVSTSTLAAAPRSSAAPAIVKS 180 Query 181 NAPTA 185 +A Sbjct 181 EDSSA 185 >gi|336460155|gb|EGO39060.1| PPE-repeat containing protein [Mycobacterium avium subsp. paratuberculosis S397] Length=507 Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 127/185 (69%), Positives = 148/185 (80%), Gaps = 0/185 (0%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAP+WMASPPE+HSALLSSGPGPGPLL +A W SLS YA ADEL A LAAVQAG W Sbjct 1 MTAPVWMASPPEIHSALLSSGPGPGPLLEAAAAWSSLSAEYASAADELTATLAAVQAGPW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 +GPT YVAAH PYLAWL Q+SA++A A + E AA+AY ALA MPTL EL NHA H Sbjct 61 EGPTTEAYVAAHAPYLAWLDQSSADAAGEAAQHEIAASAYTVALATMPTLPELATNHATH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 L+ATNFFGINTIPIALNE+DYARMW+QAATTM++YQ VST+ +AAAP+++ AP IVK+ Sbjct 121 AALVATNFFGINTIPIALNEADYARMWVQAATTMSTYQTVSTSTLAAAPRSSAAPAIVKS 180 Query 181 NAPTA 185 +A Sbjct 181 EDSSA 185 >gi|254775170|ref|ZP_05216686.1| PPE family protein [Mycobacterium avium subsp. avium ATCC 25291] Length=528 Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 141/211 (67%), Positives = 161/211 (77%), Gaps = 11/211 (5%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMA PPE+HSALLSSGPGPGPLL SA W SLS YA A EL ALL VQAG W Sbjct 1 MTAPIWMAFPPEIHSALLSSGPGPGPLLASAGAWSSLSTEYAAAASELTALLDEVQAGAW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 +GP+AA Y AAH PY+AWL QASA+SAAMA RQETAATAY TALAAMPTL EL ANHA+H Sbjct 61 EGPSAAQYAAAHAPYVAWLTQASADSAAMAARQETAATAYTTALAAMPTLGELAANHAMH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 L++TNFFG+NTIPIALNE+DY+RMW+QAATTM++YQAVST AVA+APQ T AP+I+ Sbjct 121 AALVSTNFFGVNTIPIALNEADYSRMWVQAATTMSTYQAVSTTAVASAPQATAAPKIMNV 180 Query 181 -----------NAPTAASDEPNQVQEWLQWL 200 N + P +QEWL+ L Sbjct 181 GMSGGSGMSGGNPYVMGTALPQNLQEWLEAL 211 >gi|296165048|ref|ZP_06847603.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899696|gb|EFG79147.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=537 Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 138/222 (63%), Positives = 157/222 (71%), Gaps = 22/222 (9%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMA PPEVHS LLSSGPGPGPLL +A W++LS YA A EL +LL V AG+W Sbjct 1 MTAPIWMAFPPEVHSMLLSSGPGPGPLLAAAGAWNALSTEYAAVAGELTSLLGEVSAGSW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 DGP+AA Y+ AH PYL WL ++SA SAAMA +QE AA AY TALAAMPTLAEL ANHA H Sbjct 61 DGPSAAAYLGAHAPYLDWLTRSSAASAAMAAQQEVAAGAYTTALAAMPTLAELAANHATH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 VL+ATNFFGINTIPIALNE+DY+RMW+QAATTM++YQAVST AVAAAP T P I+KA Sbjct 121 AVLVATNFFGINTIPIALNEADYSRMWVQAATTMSTYQAVSTTAVAAAPPATATPPIMKA 180 Query 181 ----------------------NAPTAASDEPNQVQEWLQWL 200 N + P +QEWLQ L Sbjct 181 DMGTSGMGSGSGMNGGSGMSGGNPYIMGTSLPQNLQEWLQAL 222 >gi|296165161|ref|ZP_06847709.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899469|gb|EFG78927.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=307 Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 128/196 (66%), Positives = 148/196 (76%), Gaps = 4/196 (2%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIW+A PPEVHS LLSSGPGPGPLL +A W S+S YAE ADEL LL AVQ G W Sbjct 1 MTAPIWIAFPPEVHSTLLSSGPGPGPLLAAAATWSSMSGQYAEAADELGGLLGAVQGGAW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 +GPTA YVAAH PYLAWL+++SA SA A ETAA AY ALAAMPT+ EL ANHA+H Sbjct 61 EGPTAEQYVAAHAPYLAWLLESSAKSATAAALHETAAGAYTAALAAMPTMPELAANHAVH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIV-- 178 L+ATNFFG+NTIPIA+NE+DYARMW+QAATTM SYQ + +A+AA P TTPAP IV Sbjct 121 AALVATNFFGVNTIPIAVNEADYARMWVQAATTMTSYQVTAESALAAVPATTPAPAIVTP 180 Query 179 --KANAPTAASDEPNQ 192 +A+ T +D Q Sbjct 181 GAEASVATLHADTQQQ 196 >gi|41409863|ref|NP_962699.1| hypothetical protein MAP3765 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398695|gb|AAS06315.1| hypothetical protein MAP_3765 [Mycobacterium avium subsp. paratuberculosis K-10] Length=538 Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 151/261 (58%), Positives = 177/261 (68%), Gaps = 25/261 (9%) Query 1 MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIAYAETADELAALLAAVQAGTW 60 MTAPIWMASPPEVHSALLSSGPGPG LL +A W+SLS YA TA+EL+A+LA+ QAG W Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGSLLAAAGAWNSLSAEYASTAEELSAVLASAQAGAW 60 Query 61 DGPTAAVYVAAHTPYLAWLVQASANSAAMATRQETAATAYGTALAAMPTLAELGANHALH 120 GP+A YVAAH PYLAWL QASANSA MA E ATAY ALAAMPTL EL NH +H Sbjct 61 GGPSAESYVAAHAPYLAWLTQASANSAEMAASHEVMATAYTAALAAMPTLPELATNHVVH 120 Query 121 GVLMATNFFGINTIPIALNESDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKA 180 GVL++TNFFGINTIPIA+NE+DYARMW QAA TM++YQAVSTAAVAA P T PAP IVK+ Sbjct 121 GVLLSTNFFGINTIPIAVNEADYARMWTQAAATMSTYQAVSTAAVAATPPTDPAPPIVKS 180 Query 181 NAPTAASDEPN------QVQEWL-----QWLQKIGYT-------------DFYNNVIQPF 216 A + SD+ ++ WL ++L+++G D Y N QP Sbjct 181 AALSDDSDDSGDVDHDPKIDNWLDELIARFLKQLGINWDPAQGTVNGLDYDAYTNASQP- 239 Query 217 INWLTNLPFLQAMFSGFDPWL 237 I W+ L F F +L Sbjct 240 IFWVVRALELLEDFQQFGYYL 260 Lambda K H 0.315 0.130 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1237758672258 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40