BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0268c
Length=169
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607409|ref|NP_214782.1| hypothetical protein Rv0268c [Mycob... 334 2e-90
gi|308231506|ref|ZP_07412694.2| addiction module antitoxin, Axe ... 167 7e-40
gi|167968990|ref|ZP_02551267.1| hypothetical protein MtubH3_1355... 132 2e-29
gi|206599922|ref|YP_002241727.1| gp42 [Mycobacterium phage Fruit... 114 6e-24
gi|308274593|emb|CBX31192.1| hypothetical protein N47_E47040 [un... 57.8 6e-07
gi|39997533|ref|NP_953484.1| prevent-host-death family protein [... 54.7 5e-06
gi|332702359|ref|ZP_08422447.1| prevent-host-death family protei... 52.0 3e-05
gi|317051160|ref|YP_004112276.1| prevent-host-death family prote... 48.9 3e-04
gi|256371947|ref|YP_003109771.1| prevent-host-death family prote... 48.5 3e-04
gi|224825511|ref|ZP_03698616.1| prevent-host-death family protei... 48.5 3e-04
gi|326382748|ref|ZP_08204438.1| prevent-host-death family protei... 48.1 4e-04
gi|150021048|ref|YP_001306402.1| prevent-host-death family prote... 47.8 5e-04
gi|157364136|ref|YP_001470903.1| prevent-host-death family prote... 47.4 8e-04
gi|94266294|ref|ZP_01289998.1| Prevent-host-death protein [delta... 47.4 8e-04
gi|296165888|ref|ZP_06848370.1| conserved hypothetical protein [... 47.0 9e-04
gi|160903202|ref|YP_001568783.1| prevent-host-death family prote... 47.0 0.001
gi|226940682|ref|YP_002795756.1| Prevent-host-death protein [Lar... 46.2 0.001
gi|158335883|ref|YP_001517057.1| prevent-host-death family prote... 45.4 0.003
gi|258592972|emb|CBE69281.1| protein of unknown function [NC10 b... 45.1 0.004
gi|343928186|ref|ZP_08767641.1| hypothetical protein GOALK_110_0... 45.1 0.004
gi|262202561|ref|YP_003273769.1| prevent-host-death family prote... 44.7 0.004
gi|15644031|ref|NP_229080.1| hypothetical protein TM1275 [Thermo... 44.7 0.005
gi|338730769|ref|YP_004660161.1| prevent-host-death family prote... 44.7 0.005
gi|284042316|ref|YP_003392656.1| prevent-host-death family prote... 44.7 0.005
gi|315443133|ref|YP_004076012.1| prevent-host-death family prote... 44.7 0.005
gi|94264719|ref|ZP_01288499.1| Prevent-host-death protein [delta... 44.3 0.006
gi|297562520|ref|YP_003681494.1| prevent-host-death family prote... 44.3 0.006
gi|239616695|ref|YP_002940017.1| prevent-host-death family prote... 44.3 0.006
gi|93005948|ref|YP_580385.1| prevent-host-death protein [Psychro... 44.3 0.007
gi|217077611|ref|YP_002335329.1| prevent-host-death family prote... 43.9 0.008
gi|126675444|gb|ABO26358.1| TalA [Leifsonia xyli subsp. cynodontis] 43.5 0.010
gi|148270620|ref|YP_001245080.1| prevent-host-death family prote... 43.5 0.011
gi|281412930|ref|YP_003347009.1| prevent-host-death family prote... 43.5 0.011
gi|71065822|ref|YP_264549.1| StbD-like prevent host death protei... 43.1 0.012
gi|154248863|ref|YP_001409688.1| prevent-host-death family prote... 43.1 0.013
gi|30249531|ref|NP_841601.1| hypothetical protein NE1562 [Nitros... 43.1 0.015
gi|345007547|ref|YP_004800093.1| prevent-host-death family prote... 42.4 0.024
gi|56460270|ref|YP_155551.1| StbD family antitoxin [Idiomarina l... 42.4 0.026
gi|260774338|ref|ZP_05883253.1| stability protein StbD [Vibrio m... 42.0 0.028
gi|258593421|emb|CBE69760.1| Prevent-host-death protein [NC10 ba... 42.0 0.030
gi|238651112|ref|YP_002916970.1| RelB [Rickettsia peacockii str.... 42.0 0.032
gi|254442464|ref|ZP_05055940.1| addiction module antitoxin, Axe ... 42.0 0.034
gi|336126240|ref|YP_004578196.1| RelB [Vibrio anguillarum 775] >... 42.0 0.034
gi|169786812|ref|YP_001700701.1| hypothetical protein MAB_p03 [M... 42.0 0.034
gi|284990457|ref|YP_003409011.1| prevent-host-death family prote... 41.6 0.037
gi|297572115|ref|YP_003697889.1| prevent-host-death family prote... 41.6 0.037
gi|333375508|ref|ZP_08467316.1| prevent-host-death family antito... 41.6 0.039
gi|341584491|ref|YP_004764982.1| RelB [Rickettsia heilongjiangen... 41.6 0.044
gi|328952933|ref|YP_004370267.1| prevent-host-death family prote... 41.2 0.049
gi|120404226|ref|YP_954055.1| hypothetical protein Mvan_3249 [My... 40.8 0.060
>gi|15607409|ref|NP_214782.1| hypothetical protein Rv0268c [Mycobacterium tuberculosis H37Rv]
gi|15839649|ref|NP_334686.1| hypothetical protein MT0281 [Mycobacterium tuberculosis CDC1551]
gi|31791446|ref|NP_853939.1| hypothetical protein Mb0274c [Mycobacterium bovis AF2122/97]
62 more sequence titles
Length=169
Score = 334 bits (857), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/169 (99%), Positives = 169/169 (100%), Gaps = 0/169 (0%)
Query 1 VGTRSKSRTRQLKQSNGCTATTSGASDRRRRARRRTAPAWLREDEWLRHHLPHPPRQLSR 60
+GTRSKSRTRQLKQSNGCTATTSGASDRRRRARRRTAPAWLREDEWLRHHLPHPPRQLSR
Sbjct 1 MGTRSKSRTRQLKQSNGCTATTSGASDRRRRARRRTAPAWLREDEWLRHHLPHPPRQLSR 60
Query 61 CLHRRRRSACHHRYSRRTPKGGLPMTSSLVPISEARAHLSRLVRESADDDVVLMNHGRPA 120
CLHRRRRSACHHRYSRRTPKGGLPMTSSLVPISEARAHLSRLVRESADDDVVLMNHGRPA
Sbjct 61 CLHRRRRSACHHRYSRRTPKGGLPMTSSLVPISEARAHLSRLVRESADDDVVLMNHGRPA 120
Query 121 AILISAERYESLMEELEDLRDRLSVHEREHVTMPLDKLGAELGVDIGRV 169
AILISAERYESLMEELEDLRDRLSVHEREHVTMPLDKLGAELGVDIGRV
Sbjct 121 AILISAERYESLMEELEDLRDRLSVHEREHVTMPLDKLGAELGVDIGRV 169
>gi|308231506|ref|ZP_07412694.2| addiction module antitoxin, Axe family [Mycobacterium tuberculosis
SUMu001]
gi|308371629|ref|ZP_07425580.2| addiction module antitoxin, Axe family [Mycobacterium tuberculosis
SUMu004]
gi|308372845|ref|ZP_07430113.2| addiction module antitoxin, Axe family [Mycobacterium tuberculosis
SUMu005]
9 more sequence titles
Length=85
Score = 167 bits (422), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/85 (100%), Positives = 85/85 (100%), Gaps = 0/85 (0%)
Query 85 MTSSLVPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRDRLS 144
MTSSLVPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRDRLS
Sbjct 1 MTSSLVPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRDRLS 60
Query 145 VHEREHVTMPLDKLGAELGVDIGRV 169
VHEREHVTMPLDKLGAELGVDIGRV
Sbjct 61 VHEREHVTMPLDKLGAELGVDIGRV 85
>gi|167968990|ref|ZP_02551267.1| hypothetical protein MtubH3_13557 [Mycobacterium tuberculosis
H37Ra]
gi|254549207|ref|ZP_05139654.1| hypothetical protein Mtube_01876 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length=67
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/67 (99%), Positives = 67/67 (100%), Gaps = 0/67 (0%)
Query 103 VRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRDRLSVHEREHVTMPLDKLGAEL 162
+RESADDDVVLMNHGRPAAILISAERYESLMEELEDLRDRLSVHEREHVTMPLDKLGAEL
Sbjct 1 MRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRDRLSVHEREHVTMPLDKLGAEL 60
Query 163 GVDIGRV 169
GVDIGRV
Sbjct 61 GVDIGRV 67
>gi|206599922|ref|YP_002241727.1| gp42 [Mycobacterium phage Fruitloop]
gi|206287010|gb|ACI12356.1| gp42 [Mycobacterium phage Fruitloop]
Length=82
Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/78 (75%), Positives = 65/78 (84%), Gaps = 0/78 (0%)
Query 87 SSLVPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRDRLSVH 146
S LVPIS+A+A LS LVR+S D DVVLMNH PAA+LIS ERYESL EELEDLRDRLSVH
Sbjct 2 SVLVPISKAKAKLSELVRQSEDTDVVLMNHSTPAAVLISVERYESLQEELEDLRDRLSVH 61
Query 147 EREHVTMPLDKLGAELGV 164
ER VT+ +DKL AELG+
Sbjct 62 ERSGVTVSVDKLMAELGL 79
>gi|308274593|emb|CBX31192.1| hypothetical protein N47_E47040 [uncultured Desulfobacterium
sp.]
Length=83
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/79 (40%), Positives = 50/79 (64%), Gaps = 5/79 (6%)
Query 85 MTSSLVPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRDRLS 144
+ S V ISE + + S L+ +S + + ++NH RP A LI AE YE+L+E++ED + +
Sbjct 5 LASCSVSISELKKNPSLLIEQSGGEPIAILNHNRPTAYLIPAETYEALLEKIEDYQLGVI 64
Query 145 VHEREH-----VTMPLDKL 158
V+ER+H V + LD+L
Sbjct 65 VNERQHEKFSAVEVTLDEL 83
>gi|39997533|ref|NP_953484.1| prevent-host-death family protein [Geobacter sulfurreducens PCA]
gi|39984424|gb|AAR35811.1| prevent-host-death family protein [Geobacter sulfurreducens PCA]
gi|298506476|gb|ADI85199.1| prevent-host-death family protein [Geobacter sulfurreducens KN400]
Length=81
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/72 (41%), Positives = 47/72 (66%), Gaps = 3/72 (4%)
Query 90 VPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRDRLSVHERE 149
V IS+ + + +R++ +S + V ++NH +P+A LI A+ +E+LME+LED V ERE
Sbjct 10 VSISDLKKNPTRIINQSEGEPVAILNHNKPSAYLIPADAFEALMEKLEDYELSQIVKERE 69
Query 150 H---VTMPLDKL 158
H V + LD+L
Sbjct 70 HEPSVKVSLDEL 81
>gi|332702359|ref|ZP_08422447.1| prevent-host-death family protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332552508|gb|EGJ49552.1| prevent-host-death family protein [Desulfovibrio africanus str.
Walvis Bay]
Length=81
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (39%), Positives = 44/72 (62%), Gaps = 3/72 (4%)
Query 90 VPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRDRLSVHERE 149
+ ++E + +LS ++ ++ DD V ++NH RP A L+SA YE L+E LEDL D ER
Sbjct 10 ISVTELKRNLSTVLSQAGDDPVAVLNHNRPEAYLLSAAHYERLLERLEDLEDAKLAQERA 69
Query 150 ---HVTMPLDKL 158
V + +D+L
Sbjct 70 AGPFVEVNIDEL 81
>gi|317051160|ref|YP_004112276.1| prevent-host-death family protein [Desulfurispirillum indicum
S5]
gi|316946244|gb|ADU65720.1| prevent-host-death family protein [Desulfurispirillum indicum
S5]
Length=81
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/77 (34%), Positives = 45/77 (59%), Gaps = 3/77 (3%)
Query 85 MTSSLVPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRDRLS 144
+ + V ++E + + ++R++ D V ++NH RP A L+ A YE L+E LED+ D L
Sbjct 5 LADATVSVTELKRSYAEILRKAEDFPVAILNHNRPEAYLLPAAYYERLLERLEDIEDALL 64
Query 145 VHERE---HVTMPLDKL 158
+ ER+ + + LD L
Sbjct 65 IRERQEGPFIEVSLDDL 81
>gi|256371947|ref|YP_003109771.1| prevent-host-death family protein [Acidimicrobium ferrooxidans
DSM 10331]
gi|256008531|gb|ACU54098.1| prevent-host-death family protein [Acidimicrobium ferrooxidans
DSM 10331]
Length=99
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/57 (44%), Positives = 38/57 (67%), Gaps = 2/57 (3%)
Query 87 SSLVPISEARAHLSRLVRESAD--DDVVLMNHGRPAAILISAERYESLMEELEDLRD 141
S +VPI E R+ LS+++ + AD + V++ HGRPAA+L+ + YE+L E E L D
Sbjct 8 SKIVPIRELRSELSQVIDQVADLREHVIVTRHGRPAAVLVPVDEYEALEETAEILSD 64
>gi|224825511|ref|ZP_03698616.1| prevent-host-death family protein [Lutiella nitroferrum 2002]
gi|224602432|gb|EEG08610.1| prevent-host-death family protein [Lutiella nitroferrum 2002]
Length=81
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/72 (37%), Positives = 44/72 (62%), Gaps = 5/72 (6%)
Query 90 VPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRDRLSVHERE 149
V ++E + + + ++RE+ D V ++NH RP A L+SA YE LM+ +EDL D + +R+
Sbjct 10 VSVTELKRNFAGVLREAGDAPVAVINHNRPEAYLLSARHYEQLMDYVEDLEDAELIRQRQ 69
Query 150 H-----VTMPLD 156
+ V + LD
Sbjct 70 NEPSISVNLELD 81
>gi|326382748|ref|ZP_08204438.1| prevent-host-death family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326198338|gb|EGD55522.1| prevent-host-death family protein [Gordonia neofelifaecis NRRL
B-59395]
Length=90
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/85 (39%), Positives = 47/85 (56%), Gaps = 10/85 (11%)
Query 90 VPISEARAHLSRLV--RESADDDVVLMNHGRPAAILISAERYESLMEELE-----DLRDR 142
VP+ EA+A LS LV E D + + HG+PAA+LISA+ E L E + +R+
Sbjct 4 VPLGEAKARLSALVDSAEQTHDRITITKHGKPAAVLISADDLEELTETIHWLSQPGIRET 63
Query 143 LSVHEREH---VTMPLDKLGAELGV 164
+ +RE+ T L L AELG+
Sbjct 64 IDAGDREYESGQTTSLADLRAELGI 88
>gi|150021048|ref|YP_001306402.1| prevent-host-death family protein [Thermosipho melanesiensis
BI429]
gi|149793569|gb|ABR31017.1| prevent-host-death family protein [Thermosipho melanesiensis
BI429]
Length=84
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 15/48 (32%), Positives = 35/48 (73%), Gaps = 0/48 (0%)
Query 92 ISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDL 139
I+EA+A S+++ ES ++++ +G+P +++IS E++E ++ LE++
Sbjct 11 IAEAKAKFSKVIEESGKKNIIITKNGKPVSVIISYEKFEKVLNFLENV 58
>gi|157364136|ref|YP_001470903.1| prevent-host-death family protein [Thermotoga lettingae TMO]
gi|157314740|gb|ABV33839.1| prevent-host-death family protein [Thermotoga lettingae TMO]
Length=111
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/56 (40%), Positives = 35/56 (63%), Gaps = 0/56 (0%)
Query 86 TSSLVPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRD 141
+ I++A+A LS +V+ES DDV++ +G P A LI ERY + + ++DL D
Sbjct 28 SEKFYSIAQAKAKLSEVVKESQKDDVLITKNGVPYAALIGYERYRKISKLMDDLYD 83
>gi|94266294|ref|ZP_01289998.1| Prevent-host-death protein [delta proteobacterium MLMS-1]
gi|94271146|ref|ZP_01291894.1| Prevent-host-death protein [delta proteobacterium MLMS-1]
gi|93450547|gb|EAT01689.1| Prevent-host-death protein [delta proteobacterium MLMS-1]
gi|93453114|gb|EAT03588.1| Prevent-host-death protein [delta proteobacterium MLMS-1]
Length=81
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/77 (38%), Positives = 46/77 (60%), Gaps = 6/77 (7%)
Query 85 MTSSLVPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRDRLS 144
MT+S ++E + + + +++++ D V ++NH RP A L+ A YE LM LEDL D
Sbjct 8 MTTS---VTELKRNFAAILKQADDCPVAILNHNRPEAYLLPAAYYERLMAHLEDLEDAKL 64
Query 145 VHEREH---VTMPLDKL 158
V ER + V + LD+L
Sbjct 65 VSERANGPFVEVSLDEL 81
>gi|296165888|ref|ZP_06848370.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898763|gb|EFG78287.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=71
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (69%), Gaps = 6/60 (10%)
Query 82 GLPMTSSLVPISEARAHLSRLVRESADDDVVLMN-HGRPAAILISAERYESLMEELEDLR 140
G+P S L+P+ E AHL +R+S +VVL + +PAA+++S ERY +L++ELE LR
Sbjct 14 GVP--SDLIPVRELHAHL---IRQSVAGNVVLTDADAKPAAVVMSMERYNALLDELEALR 68
>gi|160903202|ref|YP_001568783.1| prevent-host-death family protein [Petrotoga mobilis SJ95]
gi|160360846|gb|ABX32460.1| prevent-host-death family protein [Petrotoga mobilis SJ95]
Length=84
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (33%), Positives = 43/64 (68%), Gaps = 1/64 (1%)
Query 88 SLVPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRDRLSVHE 147
+ ++EA+A LS++V E + D+V+ +G P +L+ +++ LME ++++RD +S+ E
Sbjct 7 TFYSLAEAKAKLSQVVDEVENKDIVITKNGVPKVVLLDYDKFVKLMEFVDEVRD-ISLFE 65
Query 148 REHV 151
E+V
Sbjct 66 IENV 69
>gi|226940682|ref|YP_002795756.1| Prevent-host-death protein [Laribacter hongkongensis HLHK9]
gi|226715609|gb|ACO74747.1| Prevent-host-death protein [Laribacter hongkongensis HLHK9]
Length=81
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (37%), Positives = 44/72 (62%), Gaps = 3/72 (4%)
Query 90 VPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRDRLSVHERE 149
V ++E + S ++ ++ + V ++NH RPAA L+SAE +ES+++ LED +D ER
Sbjct 10 VSVTELKRSPSAIIEQAGNSPVAILNHNRPAAYLLSAELFESILDRLEDAQDVKLARERA 69
Query 150 H---VTMPLDKL 158
+ V + LD L
Sbjct 70 NGPFVEVNLDDL 81
>gi|158335883|ref|YP_001517057.1| prevent-host-death family protein [Acaryochloris marina MBIC11017]
gi|158306124|gb|ABW27741.1| prevent-host-death family protein, putative [Acaryochloris marina
MBIC11017]
Length=87
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/53 (38%), Positives = 32/53 (61%), Gaps = 0/53 (0%)
Query 89 LVPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRD 141
+ I+E R L L + D+ V++ HG+PA + + E++ES+ME LE L D
Sbjct 4 FLTITETRKQLLTLPEQLTDEPVIITKHGKPAMVALGYEQFESIMETLEVLSD 56
>gi|258592972|emb|CBE69281.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
Length=92
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/62 (36%), Positives = 36/62 (59%), Gaps = 0/62 (0%)
Query 86 TSSLVPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRDRLSV 145
+ ++PISE R + ++ +L HG+ AA+L+S + Y L+EELEDL+D +
Sbjct 3 INEVIPISELRKRQAEVLAALEKGPAILTQHGKGAAVLLSLDAYNRLLEELEDLQDAMDA 62
Query 146 HE 147
E
Sbjct 63 VE 64
>gi|343928186|ref|ZP_08767641.1| hypothetical protein GOALK_110_00270 [Gordonia alkanivorans NBRC
16433]
gi|343761884|dbj|GAA14567.1| hypothetical protein GOALK_110_00270 [Gordonia alkanivorans NBRC
16433]
Length=88
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/85 (36%), Positives = 49/85 (58%), Gaps = 10/85 (11%)
Query 90 VPISEARAHLSRLVR--ESADDDVVLMNHGRPAAILISAERYESLMEEL-----EDLRDR 142
+P+ EA+ LS L+ E+ D + + HG+PAA+L+SA+ ESL E + LRD
Sbjct 1 MPLGEAKDKLSALIDSAETTHDIITITKHGKPAAVLMSADDLESLHETIYWLSRAGLRDD 60
Query 143 LSVHEREHV---TMPLDKLGAELGV 164
++ + E+ T+ +D L AE G+
Sbjct 61 VATADAEYAAGHTVSIDDLRAEHGL 85
>gi|262202561|ref|YP_003273769.1| prevent-host-death family protein [Gordonia bronchialis DSM 43247]
gi|262085908|gb|ACY21876.1| prevent-host-death family protein [Gordonia bronchialis DSM 43247]
Length=91
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/85 (36%), Positives = 48/85 (57%), Gaps = 10/85 (11%)
Query 90 VPISEARAHLSRLV--RESADDDVVLMNHGRPAAILISAERYESLMEEL-----EDLRDR 142
VP+ EA+ LS L+ E+ D + + HG+PAA+L+SA+ ESL E + +RD
Sbjct 4 VPLGEAKDKLSALIDSAETTHDIITITKHGKPAAVLMSADDLESLHETIYWLSRAGVRDD 63
Query 143 LSVHEREHV---TMPLDKLGAELGV 164
++ + E+ T +D L AE G+
Sbjct 64 VATADAEYAAGHTASIDDLRAEHGM 88
>gi|15644031|ref|NP_229080.1| hypothetical protein TM1275 [Thermotoga maritima MSB8]
gi|4981833|gb|AAD36350.1|AE001783_1 hypothetical protein TM_1275 [Thermotoga maritima MSB8]
Length=87
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/54 (36%), Positives = 35/54 (65%), Gaps = 0/54 (0%)
Query 88 SLVPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRD 141
S +++A+A S++V E+ DVV+ +G PA +I E+Y+ LME ++++ D
Sbjct 7 SFYSLADAKARFSQVVEEAKTKDVVVTKNGVPAVAVIDYEKYKKLMEFMDEILD 60
>gi|338730769|ref|YP_004660161.1| prevent-host-death family protein [Thermotoga thermarum DSM 5069]
gi|335365120|gb|AEH51065.1| prevent-host-death family protein [Thermotoga thermarum DSM 5069]
Length=88
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 36/50 (72%), Gaps = 0/50 (0%)
Query 92 ISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRD 141
++EA+A LS+LV + + DVV+ +G PAA+L+ ER++ + + ++DL +
Sbjct 11 VAEAKAKLSQLVNLTKNKDVVITKNGHPAAVLMDYERFKKISKFIDDLYE 60
>gi|284042316|ref|YP_003392656.1| prevent-host-death family protein [Conexibacter woesei DSM 14684]
gi|283946537|gb|ADB49281.1| prevent-host-death family protein [Conexibacter woesei DSM 14684]
Length=99
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/60 (47%), Positives = 37/60 (62%), Gaps = 2/60 (3%)
Query 85 MTSSLVPISEARAHLSRLVR--ESADDDVVLMNHGRPAAILISAERYESLMEELEDLRDR 142
+ S +P+S ++HLS LV E D VV+ +GRPAA+LIS + ESL E L L DR
Sbjct 6 VMSETLPLSAVKSHLSELVDRVEGQHDRVVVTRNGRPAAVLISPDDLESLEETLAILSDR 65
>gi|315443133|ref|YP_004076012.1| prevent-host-death family protein [Mycobacterium sp. Spyr1]
gi|315261436|gb|ADT98177.1| prevent-host-death family protein [Mycobacterium sp. Spyr1]
Length=94
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/55 (44%), Positives = 38/55 (70%), Gaps = 2/55 (3%)
Query 90 VPISEARAHLSRLVRESA--DDDVVLMNHGRPAAILISAERYESLMEELEDLRDR 142
+P++E RA+LS+LV E+ + + GR AA+++SAE Y+S+ME L+ L DR
Sbjct 4 LPLAEVRANLSKLVDEAVRTHQRIEVTRQGRRAAVILSAEDYDSIMETLDILSDR 58
>gi|94264719|ref|ZP_01288499.1| Prevent-host-death protein [delta proteobacterium MLMS-1]
gi|93454828|gb|EAT05078.1| Prevent-host-death protein [delta proteobacterium MLMS-1]
Length=81
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/70 (36%), Positives = 43/70 (62%), Gaps = 3/70 (4%)
Query 92 ISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRDRLSVHEREH- 150
ISE + + S ++ ++ + VV++NH RP A L+ +E++ME L+DL V ER++
Sbjct 12 ISELKKNPSAVINQAHGEAVVILNHNRPTAYLLPVATFEAMMEALDDLDLAQLVRERQNE 71
Query 151 --VTMPLDKL 158
V + LD+L
Sbjct 72 ATVKVTLDEL 81
>gi|297562520|ref|YP_003681494.1| prevent-host-death family protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296846968|gb|ADH68988.1| prevent-host-death family protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length=96
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/49 (43%), Positives = 35/49 (72%), Gaps = 2/49 (4%)
Query 88 SLVPISEARAHLSRLVRES--ADDDVVLMNHGRPAAILISAERYESLME 134
+ +P++EAR +LS++V E D V + +GRP+A++IS + YES+ME
Sbjct 2 TTLPLAEARNNLSKIVDEVERTHDAVTITRNGRPSAVVISVDDYESMME 50
>gi|239616695|ref|YP_002940017.1| prevent-host-death family protein [Kosmotoga olearia TBF 19.5.1]
gi|239505526|gb|ACR79013.1| prevent-host-death family protein [Kosmotoga olearia TBF 19.5.1]
Length=92
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/53 (36%), Positives = 34/53 (65%), Gaps = 0/53 (0%)
Query 89 LVPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRD 141
I++A+AH S++V ES DV++ +G P A++I E+Y ++ + +E RD
Sbjct 8 FYSIADAKAHFSQVVDESHSADVIITKNGVPVAVVIDYEKYVAVNKFIEQTRD 60
>gi|93005948|ref|YP_580385.1| prevent-host-death protein [Psychrobacter cryohalolentis K5]
gi|92393626|gb|ABE74901.1| Prevent-host-death protein [Psychrobacter cryohalolentis K5]
Length=83
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/48 (34%), Positives = 34/48 (71%), Gaps = 0/48 (0%)
Query 92 ISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDL 139
ISE +++ S L+++S + + ++NH +P A L+S + +E +ME ++D+
Sbjct 12 ISELKSNPSALIKQSDGESIAILNHNKPVAYLVSTDVFERMMEAMDDM 59
>gi|217077611|ref|YP_002335329.1| prevent-host-death family protein, [Thermosipho africanus TCF52B]
gi|217037466|gb|ACJ75988.1| prevent-host-death family protein, putative [Thermosipho africanus
TCF52B]
Length=86
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/48 (30%), Positives = 36/48 (75%), Gaps = 0/48 (0%)
Query 92 ISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDL 139
I+EA+A S+++ ES +++V++ +G+P +++I +++E ++ LE++
Sbjct 12 IAEAKAKFSKVIDESRENNVIITKNGKPVSVIIDFDKFEKIVSFLENV 59
>gi|126675444|gb|ABO26358.1| TalA [Leifsonia xyli subsp. cynodontis]
Length=89
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (64%), Gaps = 2/52 (3%)
Query 92 ISEARAHLSRLVR--ESADDDVVLMNHGRPAAILISAERYESLMEELEDLRD 141
+SEA+ LS LV E+ D VV+ HG+PAA+LIS E +SL E L L D
Sbjct 6 VSEAKDKLSNLVEGVEATHDAVVITRHGKPAAVLISPEDLDSLQEMLAWLSD 57
>gi|148270620|ref|YP_001245080.1| prevent-host-death family protein [Thermotoga petrophila RKU-1]
gi|170289325|ref|YP_001739563.1| prevent-host-death family protein [Thermotoga sp. RQ2]
gi|222100271|ref|YP_002534839.1| Prevent-host-death family protein [Thermotoga neapolitana DSM
4359]
gi|147736164|gb|ABQ47504.1| prevent-host-death family protein [Thermotoga petrophila RKU-1]
gi|170176828|gb|ACB09880.1| prevent-host-death family protein [Thermotoga sp. RQ2]
gi|221572661|gb|ACM23473.1| Prevent-host-death family protein [Thermotoga neapolitana DSM
4359]
Length=87
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (36%), Positives = 34/54 (63%), Gaps = 0/54 (0%)
Query 88 SLVPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRD 141
S +++A+A S++V E+ DVV+ +G PA +I E+Y LME ++++ D
Sbjct 7 SFYSLADAKARFSQVVEEAKTKDVVVTKNGVPAVAVIDYEKYRKLMEFMDEILD 60
>gi|281412930|ref|YP_003347009.1| prevent-host-death family protein [Thermotoga naphthophila RKU-10]
gi|281374033|gb|ADA67595.1| prevent-host-death family protein [Thermotoga naphthophila RKU-10]
Length=87
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (36%), Positives = 34/54 (63%), Gaps = 0/54 (0%)
Query 88 SLVPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRD 141
S +++A+A S++V E+ DVV+ +G PA +I E+Y LME ++++ D
Sbjct 7 SFYSLADAKARFSQVVEEAKTKDVVVTKNGVPAVAVIDYEKYRKLMEFMDEILD 60
>gi|71065822|ref|YP_264549.1| StbD-like prevent host death protein [Psychrobacter arcticus
273-4]
gi|71038807|gb|AAZ19115.1| probable StbD-like prevent host death protein [Psychrobacter
arcticus 273-4]
Length=83
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/48 (34%), Positives = 33/48 (69%), Gaps = 0/48 (0%)
Query 92 ISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDL 139
ISE + + S L+++S + + ++NH +P A L+S + +E +ME ++D+
Sbjct 12 ISELKNNPSALIKQSDGESIAILNHNKPVAYLVSTDVFERMMEAMDDM 59
>gi|154248863|ref|YP_001409688.1| prevent-host-death family protein [Fervidobacterium nodosum Rt17-B1]
gi|154152799|gb|ABS60031.1| prevent-host-death family protein [Fervidobacterium nodosum Rt17-B1]
Length=87
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/57 (29%), Positives = 36/57 (64%), Gaps = 0/57 (0%)
Query 85 MTSSLVPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRD 141
+ +++A+A S +V S + DVV+ +G+PAA++I+ E+Y +++ ++ + D
Sbjct 3 FKTDFYSLADAKAKFSEVVEISENVDVVITKNGKPAAVIINYEKYNKILDFIDKVWD 59
>gi|30249531|ref|NP_841601.1| hypothetical protein NE1562 [Nitrosomonas europaea ATCC 19718]
gi|30138894|emb|CAD85473.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718]
Length=83
Score = 43.1 bits (100), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/47 (43%), Positives = 32/47 (69%), Gaps = 0/47 (0%)
Query 92 ISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELED 138
ISE + + + L+R++ + + ++NH P A L+ AE YE LME+LED
Sbjct 12 ISELKKNPTALLRKAEGETIAILNHNLPTAYLVPAEVYELLMEKLED 58
>gi|345007547|ref|YP_004800093.1| prevent-host-death family protein [Streptomyces violaceusniger
Tu 4113]
gi|344042886|gb|AEM88610.1| prevent-host-death family protein [Streptomyces violaceusniger
Tu 4113]
Length=85
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/87 (34%), Positives = 49/87 (57%), Gaps = 16/87 (18%)
Query 87 SSLVPISEARAHLSRLVRES--ADDDVVLMNHGRPAAILISAERYESLMEELEDLRDRLS 144
S +PI+EARA LVR + A + + + +HG+PAA+LI+ +EL DL D L+
Sbjct 2 SDTLPITEARARFGSLVRRASHARERITITDHGQPAAVLINP-------QELADLEDALA 54
Query 145 VHER-------EHVTMPLDKLGAELGV 164
+ + E +P +++ A+LG+
Sbjct 55 LAQYRARQASGEATGVPHEQVRAQLGL 81
>gi|56460270|ref|YP_155551.1| StbD family antitoxin [Idiomarina loihiensis L2TR]
gi|56179280|gb|AAV82002.1| Antitoxin of toxin-antitoxin stability system, StbD family [Idiomarina
loihiensis L2TR]
Length=84
Score = 42.4 bits (98), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/71 (43%), Positives = 43/71 (61%), Gaps = 5/71 (7%)
Query 92 ISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRDRLS-VHEREH 150
ISE + + +V ES + V ++N +PA I A YE+LMEELED RD L V +R+H
Sbjct 15 ISELKKNPMAVVEESHGEPVAVLNRNQPAFYCIPAATYEALMEELED-RDLLELVKKRQH 73
Query 151 ---VTMPLDKL 158
V + +D+L
Sbjct 74 EDEVEVNIDEL 84
>gi|260774338|ref|ZP_05883253.1| stability protein StbD [Vibrio metschnikovii CIP 69.14]
gi|297580521|ref|ZP_06942448.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|260611299|gb|EEX36503.1| stability protein StbD [Vibrio metschnikovii CIP 69.14]
gi|297536167|gb|EFH75001.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length=83
Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/47 (41%), Positives = 31/47 (66%), Gaps = 0/47 (0%)
Query 92 ISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELED 138
ISE + + + L+ E+ + ++NH +PAA L+ AE YE LM+ L+D
Sbjct 12 ISELKKNPTALLNEADGSAIAILNHNKPAAYLVPAETYEYLMDMLDD 58
>gi|258593421|emb|CBE69760.1| Prevent-host-death protein [NC10 bacterium 'Dutch sediment']
Length=92
Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/47 (45%), Positives = 32/47 (69%), Gaps = 2/47 (4%)
Query 90 VPISEARAHLSRLVRE--SADDDVVLMNHGRPAAILISAERYESLME 134
+P+SE + LSRL+ E S D+ +V+ +G+PAA+LIS + ES E
Sbjct 4 LPLSEVKMKLSRLIDEVHSRDEQIVITRNGKPAAVLISPDEAESWQE 50
>gi|238651112|ref|YP_002916970.1| RelB [Rickettsia peacockii str. Rustic]
gi|238625210|gb|ACR47916.1| RelB [Rickettsia peacockii str. Rustic]
Length=79
Score = 42.0 bits (97), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/49 (41%), Positives = 32/49 (66%), Gaps = 0/49 (0%)
Query 90 VPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELED 138
V ISE + + L+ +++ + V L+NH +P A LI AE YE ++E L+D
Sbjct 10 VSISEFKKSPTALLDKASGEPVALLNHNKPTAYLIPAELYEQIIEALDD 58
>gi|254442464|ref|ZP_05055940.1| addiction module antitoxin, Axe family [Verrucomicrobiae bacterium
DG1235]
gi|198256772|gb|EDY81080.1| addiction module antitoxin, Axe family [Verrucomicrobiae bacterium
DG1235]
Length=83
Score = 42.0 bits (97), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/47 (41%), Positives = 31/47 (66%), Gaps = 0/47 (0%)
Query 92 ISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELED 138
ISE + + S+L+ ++A + V ++NH +P A LI AE YE + +ED
Sbjct 12 ISELKRNPSQLIEQAAGEAVAILNHNKPTAYLIPAETYEWISNLIED 58
>gi|336126240|ref|YP_004578196.1| RelB [Vibrio anguillarum 775]
gi|335343957|gb|AEH35239.1| RelB [Vibrio anguillarum 775]
Length=83
Score = 42.0 bits (97), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/47 (41%), Positives = 31/47 (66%), Gaps = 0/47 (0%)
Query 92 ISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELED 138
ISE + + + L+ E+ + ++NH +PAA L+ AE YE LM+ L+D
Sbjct 12 ISELKKNPTALLNEADGSAIAILNHNKPAAYLVPAETYEFLMDMLDD 58
>gi|169786812|ref|YP_001700701.1| hypothetical protein MAB_p03 [Mycobacterium abscessus ATCC 19977]
gi|184152643|ref|YP_001840846.1| hypothetical protein MMAR_p19 [Mycobacterium marinum M]
gi|169239056|emb|CAM59630.1| Conserved hypothetical protein [Mycobacterium abscessus]
gi|183178803|gb|ACC43912.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=77
Score = 42.0 bits (97), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/62 (38%), Positives = 35/62 (57%), Gaps = 0/62 (0%)
Query 81 GGLPMTSSLVPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLR 140
G + S L+P+ E L V S + V+ G+PAA+++S +RYE L++EL LR
Sbjct 11 GAQAVPSELIPVRELHQRLIDQVTTSGGNVVLADTAGKPAAVVMSLQRYEQLLDELNTLR 70
Query 141 DR 142
R
Sbjct 71 RR 72
>gi|284990457|ref|YP_003409011.1| prevent-host-death family protein [Geodermatophilus obscurus
DSM 43160]
gi|284063702|gb|ADB74640.1| prevent-host-death family protein [Geodermatophilus obscurus
DSM 43160]
Length=95
Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/52 (39%), Positives = 33/52 (64%), Gaps = 2/52 (3%)
Query 92 ISEARAHLSRLVRESAD--DDVVLMNHGRPAAILISAERYESLMEELEDLRD 141
++ +AH S+++ E A + V + +G P A++++ E YESLME LE L D
Sbjct 10 LAAVKAHFSQVIDEVAGTHERVTVTKNGSPVAVILAVEDYESLMETLEILSD 61
>gi|297572115|ref|YP_003697889.1| prevent-host-death family protein [Arcanobacterium haemolyticum
DSM 20595]
gi|296932462|gb|ADH93270.1| prevent-host-death family protein [Arcanobacterium haemolyticum
DSM 20595]
Length=68
Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/43 (47%), Positives = 29/43 (68%), Gaps = 2/43 (4%)
Query 95 ARAHLSRLVRESADDD--VVLMNHGRPAAILISAERYESLMEE 135
+R SRL++E AD D ++ +G+P A++IS ERYE LM E
Sbjct 19 SRGQASRLIKEVADKDEPAYVLRYGKPIAVVISNERYERLMSE 61
>gi|333375508|ref|ZP_08467316.1| prevent-host-death family antitoxin [Kingella kingae ATCC 23330]
gi|332970357|gb|EGK09349.1| prevent-host-death family antitoxin [Kingella kingae ATCC 23330]
Length=103
Score = 41.6 bits (96), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/59 (38%), Positives = 36/59 (62%), Gaps = 1/59 (1%)
Query 90 VPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLRDRLSVHER 148
V ++E + + + ++ E A V ++NH + A LI A+ YE LM+ LEDL+D + ER
Sbjct 33 VSVAELKRNYASIIDE-ATGAVAVLNHNKLEAYLIPAQHYEQLMDYLEDLQDAQIIQER 90
>gi|341584491|ref|YP_004764982.1| RelB [Rickettsia heilongjiangensis 054]
gi|340808716|gb|AEK75304.1| RelB [Rickettsia heilongjiangensis 054]
Length=67
Score = 41.6 bits (96), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/49 (41%), Positives = 32/49 (66%), Gaps = 0/49 (0%)
Query 90 VPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELED 138
V ISE + + L+ +++ + V L+NH +P A LI AE YE ++E L+D
Sbjct 10 VSISEFKKSPTVLLDKASGEPVALLNHNKPIAYLIPAELYEQIIEALDD 58
>gi|328952933|ref|YP_004370267.1| prevent-host-death family protein [Desulfobacca acetoxidans DSM
11109]
gi|328453257|gb|AEB09086.1| prevent-host-death family protein [Desulfobacca acetoxidans DSM
11109]
Length=102
Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/46 (40%), Positives = 31/46 (68%), Gaps = 1/46 (2%)
Query 88 SLVPISEARAHLSRLVRESADDDVVLMNH-GRPAAILISAERYESL 132
S+V ++AR HL +L+R+ +VV++ H G+PA +++S E Y L
Sbjct 3 SVVSATQARIHLGKLIRQVLAGEVVVIEHIGKPAVVVLSVEEYTKL 48
>gi|120404226|ref|YP_954055.1| hypothetical protein Mvan_3249 [Mycobacterium vanbaalenii PYR-1]
gi|119957044|gb|ABM14049.1| hypothetical protein Mvan_3249 [Mycobacterium vanbaalenii PYR-1]
Length=77
Score = 40.8 bits (94), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (57%), Gaps = 0/60 (0%)
Query 81 GGLPMTSSLVPISEARAHLSRLVRESADDDVVLMNHGRPAAILISAERYESLMEELEDLR 140
G + S L+P E HL V SA + ++ +PAA+++S +RY+ L++EL LR
Sbjct 11 GAQAVPSELIPARELHQHLINQVATSAGNVILADTASKPAAVVMSIQRYQQLLDELNSLR 70
Lambda K H
0.320 0.132 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 130209894640
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40