BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0276
Length=306
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607417|ref|NP_214790.1| hypothetical protein Rv0276 [Mycoba... 617 5e-175
gi|340625312|ref|YP_004743764.1| hypothetical protein MCAN_02831... 597 6e-169
gi|289748046|ref|ZP_06507424.1| conserved hypothetical protein [... 590 1e-166
gi|183980565|ref|YP_001848856.1| hypothetical protein MMAR_0537 ... 492 2e-137
gi|118616915|ref|YP_905247.1| hypothetical protein MUL_1201 [Myc... 488 5e-136
gi|41409822|ref|NP_962658.1| hypothetical protein MAP3724 [Mycob... 456 2e-126
gi|108797348|ref|YP_637545.1| hypothetical protein Mmcs_0368 [My... 456 2e-126
gi|254821575|ref|ZP_05226576.1| hypothetical protein MintA_16697... 451 5e-125
gi|254777322|ref|ZP_05218838.1| hypothetical protein MaviaA2_219... 449 3e-124
gi|118466939|ref|YP_884002.1| hypothetical protein MAV_4880 [Myc... 448 6e-124
gi|342859247|ref|ZP_08715901.1| hypothetical protein MCOL_10223 ... 448 6e-124
gi|296167570|ref|ZP_06849907.1| conserved hypothetical protein [... 443 2e-122
gi|240168496|ref|ZP_04747155.1| hypothetical protein MkanA1_0423... 443 2e-122
gi|333989562|ref|YP_004522176.1| hypothetical protein JDM601_092... 421 8e-116
gi|118467455|ref|YP_885024.1| hypothetical protein MSMEG_0613 [M... 407 1e-111
gi|120401435|ref|YP_951264.1| hypothetical protein Mvan_0410 [My... 399 2e-109
gi|145220934|ref|YP_001131612.1| hypothetical protein Mflv_0330 ... 384 1e-104
gi|289764395|ref|ZP_06523773.1| LOW QUALITY PROTEIN: conserved h... 365 7e-99
gi|169631406|ref|YP_001705055.1| hypothetical protein MAB_4329c ... 312 5e-83
gi|111022306|ref|YP_705278.1| hypothetical protein RHA1_ro05340 ... 304 1e-80
gi|257056043|ref|YP_003133875.1| hypothetical protein Svir_20310... 288 8e-76
gi|300790162|ref|YP_003770453.1| hypothetical protein AMED_8355 ... 287 1e-75
gi|226308995|ref|YP_002768955.1| hypothetical protein RER_55080 ... 285 5e-75
gi|229491779|ref|ZP_04385600.1| conserved hypothetical protein [... 285 6e-75
gi|226364850|ref|YP_002782632.1| hypothetical protein ROP_54400 ... 281 9e-74
gi|312137904|ref|YP_004005240.1| hypothetical protein REQ_04160 ... 263 3e-68
gi|325673329|ref|ZP_08153021.1| hypothetical protein HMPREF0724_... 261 1e-67
gi|302530434|ref|ZP_07282776.1| conserved hypothetical protein [... 260 2e-67
gi|333918388|ref|YP_004491969.1| hypothetical protein AS9A_0715 ... 259 5e-67
gi|145221027|ref|YP_001131705.1| hypothetical protein Mflv_0423 ... 258 1e-66
gi|289758359|ref|ZP_06517737.1| conserved hypothetical protein [... 255 6e-66
gi|15841729|ref|NP_336766.1| hypothetical protein MT2296 [Mycoba... 255 7e-66
gi|315442001|ref|YP_004074880.1| hypothetical protein Mspyr1_033... 254 1e-65
gi|340627241|ref|YP_004745693.1| hypothetical protein MCAN_22591... 252 5e-65
gi|15609374|ref|NP_216753.1| hypothetical protein Rv2237 [Mycoba... 252 6e-65
gi|54025229|ref|YP_119471.1| hypothetical protein nfa32600 [Noca... 251 1e-64
gi|41408086|ref|NP_960922.1| hypothetical protein MAP1988 [Mycob... 251 1e-64
gi|118617013|ref|YP_905345.1| hypothetical protein MUL_1316 [Myc... 250 2e-64
gi|54027031|ref|YP_121273.1| hypothetical protein nfa50570 [Noca... 249 5e-64
gi|333990300|ref|YP_004522914.1| hypothetical protein JDM601_166... 248 8e-64
gi|254427056|ref|ZP_05040763.1| hypothetical protein ADG881_286 ... 248 8e-64
gi|183983302|ref|YP_001851593.1| hypothetical protein MMAR_3312 ... 247 2e-63
gi|343925379|ref|ZP_08764899.1| hypothetical protein GOALK_045_0... 246 4e-63
gi|262204340|ref|YP_003275548.1| hypothetical protein Gbro_4522 ... 244 1e-62
gi|254774912|ref|ZP_05216428.1| hypothetical protein MaviaA2_095... 244 1e-62
gi|118466074|ref|YP_881411.1| hypothetical protein MAV_2203 [Myc... 243 2e-62
gi|342857258|ref|ZP_08713914.1| hypothetical protein MCOL_00230 ... 241 9e-62
gi|326383584|ref|ZP_08205270.1| hypothetical protein SCNU_11635 ... 239 5e-61
gi|118473088|ref|YP_887893.1| hypothetical protein MSMEG_3590 [M... 238 7e-61
gi|54026721|ref|YP_120963.1| hypothetical protein nfa47470 [Noca... 238 9e-61
>gi|15607417|ref|NP_214790.1| hypothetical protein Rv0276 [Mycobacterium tuberculosis H37Rv]
gi|15839657|ref|NP_334694.1| hypothetical protein MT0288 [Mycobacterium tuberculosis CDC1551]
gi|31791454|ref|NP_853947.1| hypothetical protein Mb0282 [Mycobacterium bovis AF2122/97]
73 more sequence titles
Length=306
Score = 617 bits (1592), Expect = 5e-175, Method: Compositional matrix adjust.
Identities = 306/306 (100%), Positives = 306/306 (100%), Gaps = 0/306 (0%)
Query 1 MAISLVAHQPIPHVERPMADPPRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELA 60
MAISLVAHQPIPHVERPMADPPRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELA
Sbjct 1 MAISLVAHQPIPHVERPMADPPRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELA 60
Query 61 MPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYS 120
MPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYS
Sbjct 61 MPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYS 120
Query 121 TPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVP 180
TPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVP
Sbjct 121 TPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVP 180
Query 181 PQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLI 240
PQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLI
Sbjct 181 PQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLI 240
Query 241 TTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMR 300
TTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMR
Sbjct 241 TTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMR 300
Query 301 RGRPLV 306
RGRPLV
Sbjct 301 RGRPLV 306
>gi|340625312|ref|YP_004743764.1| hypothetical protein MCAN_02831 [Mycobacterium canettii CIPT
140010059]
gi|340003502|emb|CCC42623.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=306
Score = 597 bits (1540), Expect = 6e-169, Method: Compositional matrix adjust.
Identities = 295/306 (97%), Positives = 299/306 (98%), Gaps = 0/306 (0%)
Query 1 MAISLVAHQPIPHVERPMADPPRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELA 60
MAISLVAHQPIPHVERPMADPPRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELA
Sbjct 1 MAISLVAHQPIPHVERPMADPPRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELA 60
Query 61 MPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYS 120
MPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYS
Sbjct 61 MPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYS 120
Query 121 TPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVP 180
TPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEAD HYR GMAMGTTLQVP
Sbjct 121 TPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADRHYREGMAMGTTLQVP 180
Query 181 PQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLI 240
PQMWPPDRAAFDRYW+QSLD+VHIDD VRDYLYPI ALRI GI LPGPLRR SEGIALLI
Sbjct 181 PQMWPPDRAAFDRYWQQSLDKVHIDDAVRDYLYPIAALRIPGIPLPGPLRRRSEGIALLI 240
Query 241 TTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMR 300
TTGFLPQRFRDEMRLPWDATKQRRFDALMA++RTVNRLMPRFVREFPFNLMLWDLDRRMR
Sbjct 241 TTGFLPQRFRDEMRLPWDATKQRRFDALMALVRTVNRLMPRFVREFPFNLMLWDLDRRMR 300
Query 301 RGRPLV 306
RGRPLV
Sbjct 301 RGRPLV 306
>gi|289748046|ref|ZP_06507424.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289688574|gb|EFD56062.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=309
Score = 590 bits (1520), Expect = 1e-166, Method: Compositional matrix adjust.
Identities = 290/293 (99%), Positives = 292/293 (99%), Gaps = 0/293 (0%)
Query 14 VERPMADPPRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELAMPGVGYGVLESRV 73
V+ P+ADPPRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELAMPGVGYGVLESRV
Sbjct 17 VQSPVADPPRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELAMPGVGYGVLESRV 76
Query 74 ESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDP 133
ESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDP
Sbjct 77 ESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDP 136
Query 134 ELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDR 193
ELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDR
Sbjct 137 ELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDR 196
Query 194 YWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLITTGFLPQRFRDEM 253
YWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLITTGFLPQRFRDEM
Sbjct 197 YWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLITTGFLPQRFRDEM 256
Query 254 RLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMRRGRPLV 306
RLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMRRGRPLV
Sbjct 257 RLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMRRGRPLV 309
>gi|183980565|ref|YP_001848856.1| hypothetical protein MMAR_0537 [Mycobacterium marinum M]
gi|183173891|gb|ACC39001.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=300
Score = 492 bits (1267), Expect = 2e-137, Method: Compositional matrix adjust.
Identities = 242/306 (80%), Positives = 270/306 (89%), Gaps = 6/306 (1%)
Query 1 MAISLVAHQPIPHVERPMADPPRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELA 60
M I A + PHVERP++DPPR Q+ RR+R GG D LMGVALLAGPANVIMELA
Sbjct 1 MTIQEAAGRLAPHVERPISDPPR-QVRRRKR-----GGFGDGLMGVALLAGPANVIMELA 54
Query 61 MPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYS 120
PGVG+GV+ESRVESGR+DRHPIKRARTTFTYVAVA AG+D+QKAAFRRAVN+VHAQVYS
Sbjct 55 RPGVGHGVMESRVESGRIDRHPIKRARTTFTYVAVASAGTDEQKAAFRRAVNRVHAQVYS 114
Query 121 TPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVP 180
TPESPVSY AFD ELQLWVAACLYKGGVD+YRTFVGEMDDEEAD HYR GM+MGTTLQVP
Sbjct 115 TPESPVSYSAFDVELQLWVAACLYKGGVDIYRTFVGEMDDEEADRHYRDGMSMGTTLQVP 174
Query 181 PQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLI 240
++WPPDRAAFDRYW++SL ++HIDD VR+YLYPI A R+RG+ALPGPLRR SEG+ALLI
Sbjct 175 AELWPPDRAAFDRYWQESLQKIHIDDAVREYLYPIAASRVRGVALPGPLRRWSEGLALLI 234
Query 241 TTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMR 300
TTGFLPQRFRDEMRLPWDA KQRRFD L+AV+ +NR+MPR VREFPFNLMLWDLDRR+R
Sbjct 235 TTGFLPQRFRDEMRLPWDAAKQRRFDRLIAVVGALNRMMPRIVREFPFNLMLWDLDRRIR 294
Query 301 RGRPLV 306
GR LV
Sbjct 295 TGRRLV 300
>gi|118616915|ref|YP_905247.1| hypothetical protein MUL_1201 [Mycobacterium ulcerans Agy99]
gi|118569025|gb|ABL03776.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=300
Score = 488 bits (1256), Expect = 5e-136, Method: Compositional matrix adjust.
Identities = 238/306 (78%), Positives = 269/306 (88%), Gaps = 6/306 (1%)
Query 1 MAISLVAHQPIPHVERPMADPPRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELA 60
M I A + PHVERP++DPPR Q+ +R+R GG + LMGVALLAGPANVIMELA
Sbjct 1 MTIQEAAGRLAPHVERPISDPPR-QVRQRKR-----GGFGNGLMGVALLAGPANVIMELA 54
Query 61 MPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYS 120
PGVG+GV+ESRVESGR+DRHPIKRARTTFTYVAVA AG+D+QKAAFRRAVN+VHAQVYS
Sbjct 55 RPGVGHGVMESRVESGRIDRHPIKRARTTFTYVAVASAGTDEQKAAFRRAVNRVHAQVYS 114
Query 121 TPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVP 180
TPESPVSY AFD ELQLWVAACLYKGGVD+YRTFVGEMDDEEAD HYR GM+MGTTLQVP
Sbjct 115 TPESPVSYSAFDVELQLWVAACLYKGGVDIYRTFVGEMDDEEADRHYRDGMSMGTTLQVP 174
Query 181 PQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLI 240
++WPPDRAAFDRYW++SL ++HIDD VR+YLYPI A R+RG+ALPGPLRR SEG+ALLI
Sbjct 175 AELWPPDRAAFDRYWQESLQKIHIDDAVREYLYPIAASRVRGVALPGPLRRWSEGLALLI 234
Query 241 TTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMR 300
TTGFLPQRFRDEMRLPWDA KQRRFD L+A++ +NR+MPR VREFPFN MLWDLDRR+R
Sbjct 235 TTGFLPQRFRDEMRLPWDAAKQRRFDRLIAMVGALNRMMPRIVREFPFNFMLWDLDRRIR 294
Query 301 RGRPLV 306
GR LV
Sbjct 295 TGRRLV 300
>gi|41409822|ref|NP_962658.1| hypothetical protein MAP3724 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398654|gb|AAS06274.1| hypothetical protein MAP_3724 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336460166|gb|EGO39071.1| hypothetical protein MAPs_43460 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=302
Score = 456 bits (1174), Expect = 2e-126, Method: Compositional matrix adjust.
Identities = 227/306 (75%), Positives = 259/306 (85%), Gaps = 4/306 (1%)
Query 1 MAISLVAHQPIPHVERPMADPPRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELA 60
MAI PI HVER DPPR Q RR R+ G ++ LMGVALLAGPANVIM+LA
Sbjct 1 MAIHQSVQAPIGHVERGATDPPRPQRRRRGRTL----GIDEGLMGVALLAGPANVIMQLA 56
Query 61 MPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYS 120
PGVGYGV+ESRVESGR+D HP KRARTTFTY+AVA GSD QKAAFRRAVNK HAQVYS
Sbjct 57 QPGVGYGVMESRVESGRVDLHPFKRARTTFTYLAVATNGSDAQKAAFRRAVNKAHAQVYS 116
Query 121 TPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVP 180
TPESPVSY+AFDP LQLWV ACLYKGG+D+YR F+GE+D E+A+ HYR GMA+ TTLQVP
Sbjct 117 TPESPVSYNAFDPALQLWVGACLYKGGLDIYRMFIGELDGEDAERHYREGMALATTLQVP 176
Query 181 PQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLI 240
P+MWP DRAAFDRYW +SL +VHIDD VR+YLYPI A RIRG+ LPGP++RLSEG AL+I
Sbjct 177 PKMWPADRAAFDRYWEESLAKVHIDDAVREYLYPIAANRIRGVKLPGPIQRLSEGFALMI 236
Query 241 TTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMR 300
TTGFLPQRFRDEMRLPWDATKQRRFD L+AVL TVNR +PRF+R+FPFN++L DLDRR++
Sbjct 237 TTGFLPQRFRDEMRLPWDATKQRRFDRLIAVLATVNRYLPRFIRQFPFNVLLHDLDRRIK 296
Query 301 RGRPLV 306
+GRPLV
Sbjct 297 KGRPLV 302
>gi|108797348|ref|YP_637545.1| hypothetical protein Mmcs_0368 [Mycobacterium sp. MCS]
gi|119866433|ref|YP_936385.1| hypothetical protein Mkms_0378 [Mycobacterium sp. KMS]
gi|126432970|ref|YP_001068661.1| hypothetical protein Mjls_0357 [Mycobacterium sp. JLS]
gi|108767767|gb|ABG06489.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119692522|gb|ABL89595.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126232770|gb|ABN96170.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=303
Score = 456 bits (1173), Expect = 2e-126, Method: Compositional matrix adjust.
Identities = 224/309 (73%), Positives = 256/309 (83%), Gaps = 13/309 (4%)
Query 5 LVAHQPIPHVERPMADP-------PRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIM 57
+ +P+PHVERP++ P P LARR S ED LMGVALLAGPANVIM
Sbjct 1 MTVSEPLPHVERPVSAPAHPDKLTPPPALARRAASM------EDGLMGVALLAGPANVIM 54
Query 58 ELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQ 117
+LA PGVGYGVLESRVESGR+D HP+KRARTTFTY+AVA GSD QKAAFRRAVNK HAQ
Sbjct 55 QLARPGVGYGVLESRVESGRVDLHPVKRARTTFTYLAVATRGSDAQKAAFRRAVNKAHAQ 114
Query 118 VYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTL 177
VYST ESPV YHAFD +LQLWVAACLYKG VDVYR FVGEMDD+ A+ HYR M MGTTL
Sbjct 115 VYSTDESPVKYHAFDKDLQLWVAACLYKGAVDVYRLFVGEMDDQAAEEHYRDSMTMGTTL 174
Query 178 QVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIA 237
QVPP+MWP DRAAFD+YW++SLD+VHIDD VR+YLYPI A R+RG+ LPGPL+R +E +A
Sbjct 175 QVPPEMWPADRAAFDKYWQESLDKVHIDDTVREYLYPIAASRLRGLKLPGPLQRRNEELA 234
Query 238 LLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDR 297
LLITTGFLPQRFRDEMRLPWDA +QRRFD L+ VLRTVN L+PRF+R+FPFN++L DLDR
Sbjct 235 LLITTGFLPQRFRDEMRLPWDADRQRRFDRLIGVLRTVNHLLPRFIRQFPFNVLLKDLDR 294
Query 298 RMRRGRPLV 306
R+R GRPL+
Sbjct 295 RIRTGRPLI 303
>gi|254821575|ref|ZP_05226576.1| hypothetical protein MintA_16697 [Mycobacterium intracellulare
ATCC 13950]
Length=296
Score = 451 bits (1161), Expect = 5e-125, Method: Compositional matrix adjust.
Identities = 223/297 (76%), Positives = 256/297 (87%), Gaps = 4/297 (1%)
Query 10 PIPHVERPMADPPRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELAMPGVGYGVL 69
PI HVER DPPR Q RR R+ G ++ LMGVALLAGPANVIM+LA PGVGYGV+
Sbjct 4 PIGHVERGATDPPRPQRRRRGRTL----GIDEGLMGVALLAGPANVIMQLAQPGVGYGVM 59
Query 70 ESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYSTPESPVSYH 129
ESRVESGR+D HP KRARTTFTY+AVA GS+ QKAAFRRAVNK HAQVYSTPESPVSY+
Sbjct 60 ESRVESGRVDLHPFKRARTTFTYLAVATNGSEAQKAAFRRAVNKAHAQVYSTPESPVSYN 119
Query 130 AFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVPPQMWPPDRA 189
AFDP LQLWV ACLYKGG+D+YR F+GE+D E+A+ HYR GMA+ TTLQVPP+MWP DRA
Sbjct 120 AFDPALQLWVGACLYKGGLDIYRMFIGELDGEDAERHYREGMALATTLQVPPKMWPADRA 179
Query 190 AFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLITTGFLPQRF 249
AFDRYW +SL +VHIDD VR+YLYPI A RIRG+ LPGP++RLSEG AL+ITTGFLPQRF
Sbjct 180 AFDRYWEESLAKVHIDDAVREYLYPIAANRIRGVKLPGPIQRLSEGFALMITTGFLPQRF 239
Query 250 RDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMRRGRPLV 306
RDEMRLPWDATKQRRFD L+AVL TVNR +PRF+R+FPFN++L DLDRR+++GRPLV
Sbjct 240 RDEMRLPWDATKQRRFDRLIAVLATVNRYLPRFIRQFPFNVLLHDLDRRIKKGRPLV 296
>gi|254777322|ref|ZP_05218838.1| hypothetical protein MaviaA2_21996 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=314
Score = 449 bits (1155), Expect = 3e-124, Method: Compositional matrix adjust.
Identities = 222/314 (71%), Positives = 255/314 (82%), Gaps = 8/314 (2%)
Query 1 MAISLVAHQPIPHVERPMADPPRLQLARRRRSAAGPG--------GNEDSLMGVALLAGP 52
MAI HQP HVE P + RR P G ++ LMGVALLAGP
Sbjct 1 MAIHEPVHQPTAHVEPTGHVEPTSHVERRVTDPPRPRRRKPLRTLGIDEGLMGVALLAGP 60
Query 53 ANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVN 112
ANVIM+LA PGVGYGV+ESRVESGR+D HPIKRARTTFTY+AVA +GS+ QK AFRRAVN
Sbjct 61 ANVIMQLANPGVGYGVMESRVESGRVDLHPIKRARTTFTYLAVATSGSEAQKDAFRRAVN 120
Query 113 KVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMA 172
+ HAQVYSTPESPVSY+AFDP LQLWV ACLYKGG+D+YR F+GE+D ++AD HYR GM
Sbjct 121 RAHAQVYSTPESPVSYNAFDPNLQLWVGACLYKGGLDIYRMFIGELDGDDADRHYREGMT 180
Query 173 MGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRL 232
+ TTLQVPP MWPPDRAAFDRYW +SL +VHIDD VR+YLYPI A RIRG+ LPGP+RRL
Sbjct 181 LATTLQVPPAMWPPDRAAFDRYWEESLAKVHIDDAVREYLYPIAANRIRGVWLPGPVRRL 240
Query 233 SEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLML 292
+EG AL ITTGFLPQRFRDEMRLPWDATKQRRFD L+AVL TVNR +PRF+R+FPFN++L
Sbjct 241 TEGFALFITTGFLPQRFRDEMRLPWDATKQRRFDRLIAVLATVNRYLPRFIRQFPFNVLL 300
Query 293 WDLDRRMRRGRPLV 306
+DLDRR+R+GRPLV
Sbjct 301 YDLDRRIRKGRPLV 314
>gi|118466939|ref|YP_884002.1| hypothetical protein MAV_4880 [Mycobacterium avium 104]
gi|118168226|gb|ABK69123.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=314
Score = 448 bits (1152), Expect = 6e-124, Method: Compositional matrix adjust.
Identities = 221/314 (71%), Positives = 255/314 (82%), Gaps = 8/314 (2%)
Query 1 MAISLVAHQPIPHVERPMADPPRLQLARRRRSAAGPG--------GNEDSLMGVALLAGP 52
MAI HQP HVE P + RR P G ++ LMGVALLAGP
Sbjct 1 MAIHEPVHQPTAHVEPTGHVEPTSHVERRVTDPPRPRRRKPLRTLGIDEGLMGVALLAGP 60
Query 53 ANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVN 112
ANVIM+LA PGVGYGV+ESRVESGR+D HPIKRARTTFTY+AVA +GS+ QK AFRRAVN
Sbjct 61 ANVIMQLANPGVGYGVMESRVESGRVDLHPIKRARTTFTYLAVATSGSEAQKDAFRRAVN 120
Query 113 KVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMA 172
+ HAQVYSTPESPVSY+AFDP LQLWV ACLYKGG+D+YR F+GE+D ++AD HYR GM
Sbjct 121 RAHAQVYSTPESPVSYNAFDPNLQLWVGACLYKGGLDIYRMFIGELDGDDADRHYREGMT 180
Query 173 MGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRL 232
+ TTLQVPP MWPPDRAAFDRYW +SL +VHIDD VR+YLYPI A RIRG+ LPGP+RRL
Sbjct 181 LATTLQVPPAMWPPDRAAFDRYWEESLAKVHIDDAVREYLYPIAANRIRGVWLPGPVRRL 240
Query 233 SEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLML 292
+EG AL ITTGFLPQRFRDEMRLPWD+TKQRRFD L+AVL TVNR +PRF+R+FPFN++L
Sbjct 241 TEGFALFITTGFLPQRFRDEMRLPWDSTKQRRFDRLIAVLATVNRYLPRFIRQFPFNVLL 300
Query 293 WDLDRRMRRGRPLV 306
+DLDRR+R+GRPLV
Sbjct 301 YDLDRRIRKGRPLV 314
>gi|342859247|ref|ZP_08715901.1| hypothetical protein MCOL_10223 [Mycobacterium colombiense CECT
3035]
gi|342133488|gb|EGT86691.1| hypothetical protein MCOL_10223 [Mycobacterium colombiense CECT
3035]
Length=302
Score = 448 bits (1152), Expect = 6e-124, Method: Compositional matrix adjust.
Identities = 228/306 (75%), Positives = 258/306 (85%), Gaps = 4/306 (1%)
Query 1 MAISLVAHQPIPHVERPMADPPRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELA 60
MAI HQPI HVER ADPPR Q RRRR G ++ LMGVALLAGPANVIM+L+
Sbjct 1 MAIHEPVHQPIGHVERRAADPPRPQRRRRRREL----GIDEGLMGVALLAGPANVIMQLS 56
Query 61 MPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYS 120
PGVGYGV+ESRVESGR+D HPIKRARTTFTY+AVA GSD QK AFRRAVN+ HAQVYS
Sbjct 57 HPGVGYGVMESRVESGRVDLHPIKRARTTFTYLAVATNGSDAQKDAFRRAVNRAHAQVYS 116
Query 121 TPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVP 180
TPESPVSY+AFDPELQLWV ACLYKGG+D+YR F+GE+D E+AD HYR GM + TTLQVP
Sbjct 117 TPESPVSYNAFDPELQLWVGACLYKGGLDIYRMFIGELDGEDADRHYREGMTLATTLQVP 176
Query 181 PQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLI 240
QMWP DRAAFDRYW +SL +VHIDD VR+YL+PI A RIRG+ LP L+RLS+ ALLI
Sbjct 177 TQMWPADRAAFDRYWEESLAKVHIDDAVREYLFPIAANRIRGVRLPRALQRLSDNFALLI 236
Query 241 TTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMR 300
TTGFLPQRFRDEMRLPWDATKQRRFD L+AVL TVNR +PRFVR+FPFN++L DLDRR++
Sbjct 237 TTGFLPQRFRDEMRLPWDATKQRRFDRLIAVLATVNRYLPRFVRQFPFNVLLHDLDRRIK 296
Query 301 RGRPLV 306
+GRPLV
Sbjct 297 KGRPLV 302
>gi|296167570|ref|ZP_06849907.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897136|gb|EFG76746.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=300
Score = 443 bits (1139), Expect = 2e-122, Method: Compositional matrix adjust.
Identities = 221/304 (73%), Positives = 258/304 (85%), Gaps = 4/304 (1%)
Query 3 ISLVAHQPIPHVERPMADPPRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELAMP 62
+++ H+PI VERP+AD PR + RRRR+ G ++ LMGVALLAGPANV+M+LA P
Sbjct 1 MAIPVHEPIRQVERPVADRPRARGPRRRRAL----GVDEGLMGVALLAGPANVVMQLARP 56
Query 63 GVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYSTP 122
GVGYGVLESRVESGR+D HPIKRARTTFTY+AVA GSD QK AFRRAVN+ HAQVYSTP
Sbjct 57 GVGYGVLESRVESGRVDLHPIKRARTTFTYLAVATMGSDAQKDAFRRAVNRAHAQVYSTP 116
Query 123 ESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVPPQ 182
ESPV Y+AFDP+LQLWV ACLYKGGVD+YR F+GE+D E+AD HYR GMA+ TTLQVPP+
Sbjct 117 ESPVQYNAFDPDLQLWVGACLYKGGVDIYRMFIGELDGEDADRHYREGMALATTLQVPPE 176
Query 183 MWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLITT 242
MWP DRAAFDRYW++SL +VHID+ VR+YLYPI A RIRG+ LPGPL+R SE +ALLITT
Sbjct 177 MWPADRAAFDRYWQESLAQVHIDEAVREYLYPIAANRIRGLTLPGPLQRASESLALLITT 236
Query 243 GFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMRRG 302
GFLPQRFRDEMRLPWDAT+QRRFD L+ L VNR +PRFVR FPFN++L D+DRR+R G
Sbjct 237 GFLPQRFRDEMRLPWDATRQRRFDRLIGALALVNRCLPRFVRRFPFNVLLADVDRRIRTG 296
Query 303 RPLV 306
RPLV
Sbjct 297 RPLV 300
>gi|240168496|ref|ZP_04747155.1| hypothetical protein MkanA1_04237 [Mycobacterium kansasii ATCC
12478]
Length=302
Score = 443 bits (1139), Expect = 2e-122, Method: Compositional matrix adjust.
Identities = 224/306 (74%), Positives = 256/306 (84%), Gaps = 4/306 (1%)
Query 1 MAISLVAHQPIPHVERPMADPPRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELA 60
MA S QPIPHVERP+ADPPR ARR RS+A ED+LMG+ALLAGPANVIM+LA
Sbjct 1 MATSAAVRQPIPHVERPVADPPRPGRARRGRSSA----TEDNLMGIALLAGPANVIMQLA 56
Query 61 MPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYS 120
PGVG GV+ESRVESGRLD HPIKR RTTFTY+AVA+AGSD+QKAA+RRAVN+ HAQVYS
Sbjct 57 RPGVGCGVVESRVESGRLDLHPIKRTRTTFTYIAVAMAGSDEQKAAYRRAVNRAHAQVYS 116
Query 121 TPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVP 180
T ESPV Y+AFDPELQLWVAAC+ KG DV+R FVGE+DD EA+ HYR MA+ TTLQVP
Sbjct 117 TSESPVQYNAFDPELQLWVAACMCKGAADVHRIFVGELDDVEAERHYRETMALATTLQVP 176
Query 181 PQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLI 240
+MWPPDRAAFDRYW+ SL++V ID VRDYLYPI A RI G+ +PG LR++ E IALLI
Sbjct 177 AEMWPPDRAAFDRYWQDSLEKVRIDGAVRDYLYPIAAARIPGVPVPGVLRKVPESIALLI 236
Query 241 TTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMR 300
TTGFLPQRFRDEMRLPWDA +QR FD LMAV+ +N +MPR VR+FPFNLMLWDLDRR++
Sbjct 237 TTGFLPQRFRDEMRLPWDAGRQRCFDRLMAVIGALNGMMPRAVRQFPFNLMLWDLDRRIK 296
Query 301 RGRPLV 306
GRPLV
Sbjct 297 AGRPLV 302
>gi|333989562|ref|YP_004522176.1| hypothetical protein JDM601_0922 [Mycobacterium sp. JDM601]
gi|333485530|gb|AEF34922.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=304
Score = 421 bits (1082), Expect = 8e-116, Method: Compositional matrix adjust.
Identities = 208/304 (69%), Positives = 241/304 (80%), Gaps = 2/304 (0%)
Query 5 LVAHQPIPHVERPMADPPRLQLARRRRSAAGPGGNEDSLM-GVALLAGPANVIMELAMPG 63
+ +PIP VER ++D Q A RRS D++M GVALLAGPANVIM+LA PG
Sbjct 1 MTISEPIPLVERSVSDSTSTQPAPHRRSLLPQVSCTDNMMMGVALLAGPANVIMQLARPG 60
Query 64 VGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYSTPE 123
VGYGVLESRVESGR+D HPIKRARTTFTY+ VA GSD+QKAAFR AVN H QV ST +
Sbjct 61 VGYGVLESRVESGRVDLHPIKRARTTFTYLVVATQGSDEQKAAFREAVNSAHRQVRSTAD 120
Query 124 SPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHY-RAGMAMGTTLQVPPQ 182
SPV Y+AFD +LQLWV ACLYKG VDV+R F+GEMDDE AD HY G AM T LQVP
Sbjct 121 SPVKYNAFDRDLQLWVGACLYKGNVDVHRIFLGEMDDEHADRHYHNEGKAMATMLQVPED 180
Query 183 MWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLITT 242
MWP DRAAFDRYW++ LD+VHIDD VRDYL PI A R+RG+ LPGPL+R +E +ALLITT
Sbjct 181 MWPADRAAFDRYWQEQLDKVHIDDTVRDYLLPIAASRLRGMTLPGPLQRANERLALLITT 240
Query 243 GFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMRRG 302
GFLPQRFRDEM+LPWDA KQR+FD LM V+R VN L+P+F+R FPFN++LWD+DRR+R G
Sbjct 241 GFLPQRFRDEMQLPWDADKQRQFDRLMGVIRGVNNLLPKFLRGFPFNVLLWDVDRRIRTG 300
Query 303 RPLV 306
RPLV
Sbjct 301 RPLV 304
>gi|118467455|ref|YP_885024.1| hypothetical protein MSMEG_0613 [Mycobacterium smegmatis str.
MC2 155]
gi|118168742|gb|ABK69638.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=301
Score = 407 bits (1046), Expect = 1e-111, Method: Compositional matrix adjust.
Identities = 204/304 (68%), Positives = 238/304 (79%), Gaps = 3/304 (0%)
Query 3 ISLVAHQPIPHVERPMADPPRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELAMP 62
+++ +PIP+VER M++ RRRR A +D LMGVALLAGPANVIM+LA P
Sbjct 1 MAMTVSEPIPYVERGMSESAGPAPVRRRRRKAT---FDDGLMGVALLAGPANVIMQLANP 57
Query 63 GVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYSTP 122
GVGYGV+ESRV+SGR D HP+KRARTTFTY+AVA G++ QKAAFRRAVNK HAQVYST
Sbjct 58 GVGYGVVESRVDSGRTDLHPVKRARTTFTYLAVATRGTEAQKAAFRRAVNKAHAQVYSTE 117
Query 123 ESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVPPQ 182
+SPV Y+AFD LQLWVAACLYKGGVDV R FVGEMDDE AD HYR + MGTTLQVP +
Sbjct 118 DSPVQYNAFDKNLQLWVAACLYKGGVDVLRMFVGEMDDETADRHYRDSVTMGTTLQVPAE 177
Query 183 MWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLITT 242
MWP DRAAFDRYW + +++VHIDD VR YLYPI A R + LP +++ +GIALLITT
Sbjct 178 MWPADRAAFDRYWNEQIEKVHIDDTVRAYLYPIAAGRPKATKLPRFIQKRLDGIALLITT 237
Query 243 GFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMRRG 302
GFLPQRFRDEMRLPWD +Q+RFD L+AVLR VN L+P VR FPFN +L DLD R+R G
Sbjct 238 GFLPQRFRDEMRLPWDEKRQQRFDRLIAVLRFVNDLLPAPVRAFPFNALLKDLDWRIRTG 297
Query 303 RPLV 306
R LV
Sbjct 298 RSLV 301
>gi|120401435|ref|YP_951264.1| hypothetical protein Mvan_0410 [Mycobacterium vanbaalenii PYR-1]
gi|119954253|gb|ABM11258.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=302
Score = 399 bits (1026), Expect = 2e-109, Method: Compositional matrix adjust.
Identities = 202/311 (65%), Positives = 247/311 (80%), Gaps = 14/311 (4%)
Query 1 MAISLVAHQPIPHVERPMADP-----PRLQLARRRRSAAGPGGNEDSLMGVALLAGPANV 55
M + P+P VERP+++ PR +++ R ++D ++G+ LLAGPANV
Sbjct 1 MTLDESVSAPVPLVERPVSESSVPAGPRARVSTR---------SDDGMLGLGLLAGPANV 51
Query 56 IMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVH 115
IM+LA PGVGYGVLESRVESGR+DRHP+KRARTTFTY+AV+ G+ +Q+AAFRRAVN+ H
Sbjct 52 IMQLARPGVGYGVLESRVESGRIDRHPVKRARTTFTYLAVSTNGTPEQQAAFRRAVNRAH 111
Query 116 AQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGT 175
AQV+ST ESPV YHAFD +LQLWV ACLYKG VDV+R FVGEMD+E AD Y G A+ T
Sbjct 112 AQVFSTDESPVKYHAFDKDLQLWVGACLYKGVVDVHRLFVGEMDEETADRLYLQGRALAT 171
Query 176 TLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEG 235
LQVP MWP DRAAFDRYW++SLD VHIDD VR++LYPI A R+RG+ALPGPL+R +E
Sbjct 172 MLQVPEDMWPADRAAFDRYWQESLDDVHIDDTVREFLYPIAATRLRGLALPGPLQRQTEK 231
Query 236 IALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDL 295
+ALLITTGFLPQRFR+EM+LPWDA +QRRFD LMA LR VN + P+FVR+FPFN++L DL
Sbjct 232 LALLITTGFLPQRFREEMQLPWDAGQQRRFDRLMAALRAVNSVSPKFVRQFPFNVLLKDL 291
Query 296 DRRMRRGRPLV 306
D R+R GRPLV
Sbjct 292 DWRVRTGRPLV 302
>gi|145220934|ref|YP_001131612.1| hypothetical protein Mflv_0330 [Mycobacterium gilvum PYR-GCK]
gi|315442096|ref|YP_004074975.1| hypothetical protein Mspyr1_04280 [Mycobacterium sp. Spyr1]
gi|145213420|gb|ABP42824.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315260399|gb|ADT97140.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length=301
Score = 384 bits (986), Expect = 1e-104, Method: Compositional matrix adjust.
Identities = 186/257 (73%), Positives = 210/257 (82%), Gaps = 0/257 (0%)
Query 50 AGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRR 109
AGPANVIM+LA P VGYGVLESRVESGR+DRHPIKRARTTFTY+AV+ G+ +Q+ AFRR
Sbjct 45 AGPANVIMQLARPAVGYGVLESRVESGRVDRHPIKRARTTFTYLAVSTNGTPEQQKAFRR 104
Query 110 AVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRA 169
AVN HAQV+ST ESPV YHAFD +LQLWV ACLYKG VDV+R FVGEMD+E AD Y
Sbjct 105 AVNGAHAQVFSTDESPVKYHAFDKDLQLWVGACLYKGVVDVHRLFVGEMDEETADRVYVQ 164
Query 170 GMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPL 229
G A+ T LQVP MWP DR AFDRYW SLD VHIDD VR+YLYPI A R+RG+ LPGPL
Sbjct 165 GRALATMLQVPESMWPADREAFDRYWAASLDEVHIDDTVREYLYPIAASRLRGLRLPGPL 224
Query 230 RRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFN 289
+R +E +ALLITTGFLPQRFRDEMRLPW QRRFD LM VLR N + P+FVR+FPFN
Sbjct 225 QRRNEELALLITTGFLPQRFRDEMRLPWGPDHQRRFDRLMKVLRVANTVSPKFVRQFPFN 284
Query 290 LMLWDLDRRMRRGRPLV 306
L+L D+DRR+R GRPLV
Sbjct 285 LLLKDVDRRIRTGRPLV 301
>gi|289764395|ref|ZP_06523773.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis GM 1503]
gi|289711901|gb|EFD75917.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis GM 1503]
Length=178
Score = 365 bits (936), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 178/178 (100%), Positives = 178/178 (100%), Gaps = 0/178 (0%)
Query 129 HAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVPPQMWPPDR 188
HAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVPPQMWPPDR
Sbjct 1 HAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVPPQMWPPDR 60
Query 189 AAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLITTGFLPQR 248
AAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLITTGFLPQR
Sbjct 61 AAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLITTGFLPQR 120
Query 249 FRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMRRGRPLV 306
FRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMRRGRPLV
Sbjct 121 FRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMRRGRPLV 178
>gi|169631406|ref|YP_001705055.1| hypothetical protein MAB_4329c [Mycobacterium abscessus ATCC
19977]
gi|169243373|emb|CAM64401.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=312
Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 157/266 (60%), Positives = 190/266 (72%), Gaps = 3/266 (1%)
Query 41 DSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGS 100
D+ MG+ALL GPAN+IM+LA PGVGYGV++S+VESGR D HPIKRARTTFT++AVA G+
Sbjct 50 DNFMGLALLGGPANIIMQLARPGVGYGVVDSKVESGRADLHPIKRARTTFTFLAVATLGT 109
Query 101 DDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDD 160
+QKAAFR+A N+ HAQV+S P V Y+AFDPELQ WVA CLYKG VDVY FVG +
Sbjct 110 PEQKAAFRKATNRAHAQVHSQPGDKVQYNAFDPELQKWVAVCLYKGFVDVYEAFVGPLTG 169
Query 161 EEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRI 220
E A+ + G MGTTLQ+P MWP A FD YW QS+D VHIDD VR YLY I +
Sbjct 170 ETAERCLQEGAVMGTTLQMPLAMWPKSCAEFDEYWAQSMDLVHIDDHVRPYLYRIASA-- 227
Query 221 RGIALPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMP 280
IA+P +R + ITTGFLPQRFRDEM WD +++R F L+AVL RL+P
Sbjct 228 -SIAVPPFMRGPVGAFSRFITTGFLPQRFRDEMGFAWDPSRERMFRWLLAVLGLAARLLP 286
Query 281 RFVREFPFNLMLWDLDRRMRRGRPLV 306
+R FPFN ++ DLD R+R GRPLV
Sbjct 287 NGLRRFPFNALMLDLDWRIRTGRPLV 312
>gi|111022306|ref|YP_705278.1| hypothetical protein RHA1_ro05340 [Rhodococcus jostii RHA1]
gi|110821836|gb|ABG97120.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=274
Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/267 (55%), Positives = 191/267 (72%), Gaps = 5/267 (1%)
Query 41 DSLM-GVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAG 99
D +M G LLAG AN+IM+LA PGVGYGV ES+VESG+L RHPIKR RTT TY+ VA G
Sbjct 12 DQVMDGAGLLAGAANIIMQLAHPGVGYGVYESKVESGQLFRHPIKRTRTTLTYLVVAARG 71
Query 100 SDDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMD 159
+D++KAAFR+ VN+ HA+V STP+SPV Y+AFDPELQLWVAAC+Y+G DV R G++
Sbjct 72 TDEEKAAFRKGVNRAHAKVRSTPDSPVQYNAFDPELQLWVAACIYRGFEDVNRALHGDLP 131
Query 160 DEEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALR 219
A+ Y+ G GTTLQVPP MWP DR AF+ YW ++LD+V IDD +R+++ I L
Sbjct 132 PAAAEFFYKEGATFGTTLQVPPDMWPEDRVAFEEYWNKALDKVSIDDTIREHVLSIAQLE 191
Query 220 IRGIALPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLM 279
LP + RL + + T GFLPQ+FRDEM L W Q+RFD + + T++R +
Sbjct 192 F----LPAIVSRLFGRLNMFFTNGFLPQQFRDEMHLTWTDKDQQRFDRTLRTIGTLSRRI 247
Query 280 PRFVREFPFNLMLWDLDRRMRRGRPLV 306
P +REFP+NL+++DL RRM+ G+PLV
Sbjct 248 PVRIREFPYNLLMFDLRRRMKAGKPLV 274
>gi|257056043|ref|YP_003133875.1| hypothetical protein Svir_20310 [Saccharomonospora viridis DSM
43017]
gi|256585915|gb|ACU97048.1| uncharacterized conserved protein [Saccharomonospora viridis
DSM 43017]
Length=284
Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 153/266 (58%), Positives = 194/266 (73%), Gaps = 4/266 (1%)
Query 41 DSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGS 100
++++G LLAG ANVIM+LA+P VGYGV+ESRV G + P+KR RTT TY+AVA+ G+
Sbjct 23 NTVIGAGLLAGGANVIMQLALPAVGYGVVESRVHDGNIFTRPLKRTRTTLTYLAVAMLGT 82
Query 101 DDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDD 160
D+++ AFRRAVN+ HA+V ST SPV YHA DPELQLWVAACLY+G DV+R FVGE D
Sbjct 83 DEERKAFRRAVNRQHARVRSTDTSPVRYHAMDPELQLWVAACLYRGVEDVHRVFVGEPDA 142
Query 161 EEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRI 220
+ A+ Y +GTTLQV P+MWP DRA F+RYW++SL RV IDD VR+YL+ I LR+
Sbjct 143 DTAERIYAYSARLGTTLQVRPEMWPADRAEFERYWQESLKRVSIDDTVREYLHGIATLRM 202
Query 221 RGIALPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMP 280
P P+R L + ITTGFLP FR+ MRLPW QRRFD MA+L + +P
Sbjct 203 ----FPYPVRLLFGRLNRFITTGFLPPLFREHMRLPWSDRHQRRFDRTMAILAAIVMRLP 258
Query 281 RFVREFPFNLMLWDLDRRMRRGRPLV 306
R +REFP+N++LWDL RR+R G+PLV
Sbjct 259 RPLREFPYNVLLWDLRRRLRTGKPLV 284
>gi|300790162|ref|YP_003770453.1| hypothetical protein AMED_8355 [Amycolatopsis mediterranei U32]
gi|299799676|gb|ADJ50051.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340531843|gb|AEK47048.1| hypothetical protein RAM_42905 [Amycolatopsis mediterranei S699]
Length=267
Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 153/266 (58%), Positives = 182/266 (69%), Gaps = 8/266 (3%)
Query 41 DSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGS 100
D+++G LLAG ANVIM+L+ VG+GVLESRV+SG L RHP+KR RTT TY+AVA G+
Sbjct 8 DAVIGAGLLAGSANVIMQLSRAPVGHGVLESRVDSGNLFRHPVKRTRTTLTYLAVATMGT 67
Query 101 DDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDD 160
D ++AAFR+ VN+ HAQV+ST SPV+Y AFD +LQLWVAACLYKG DV F G
Sbjct 68 DAERAAFRKGVNRAHAQVHSTASSPVAYDAFDTDLQLWVAACLYKGIEDVLLAFGG---- 123
Query 161 EEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRI 220
E + Y A+GTTLQVPP+ WP DRAAF+ YW L V IDD VR YL IV L
Sbjct 124 GEPERFYAGAAALGTTLQVPPERWPGDRAAFEEYWAGELAEVCIDDAVRRYLTRIVDLEF 183
Query 221 RGIALPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMP 280
+ GP RR +TTGFLPQRFRDEMRLPW A QRRF+AL+A L V R++P
Sbjct 184 LPPVVAGPGRRFHR----FVTTGFLPQRFRDEMRLPWTAADQRRFEALLAALGLVVRVLP 239
Query 281 RFVREFPFNLMLWDLDRRMRRGRPLV 306
+R FPFN L DL R+R GRP V
Sbjct 240 GPLRRFPFNACLADLRWRLRTGRPPV 265
>gi|226308995|ref|YP_002768955.1| hypothetical protein RER_55080 [Rhodococcus erythropolis PR4]
gi|226188112|dbj|BAH36216.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=308
Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 143/270 (53%), Positives = 178/270 (66%), Gaps = 10/270 (3%)
Query 40 EDSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAG 99
E ++ G+ LLA ANVIM+LA P VGYGV ES+VE+GRLDRHP+KR RTT TY+AVA
Sbjct 46 EKAMSGLGLLAAGANVIMQLARPAVGYGVYESKVETGRLDRHPVKRTRTTLTYLAVASLA 105
Query 100 SDDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMD 159
+D++K +RRAVN H V S S V Y+AFDPELQLWVAACLY+G DVY+ G++D
Sbjct 106 TDEEKKLYRRAVNGSHKHVRSDENSAVEYNAFDPELQLWVAACLYRGFEDVYKILYGDLD 165
Query 160 DEEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALR 219
D Y+ GTTLQ+ MWP DR AF+ YW ++LD+V ID+ +R++LY I +
Sbjct 166 PLTQDAFYQRSATFGTTLQMRRDMWPADRDAFEVYWNENLDKVAIDETIREHLYGIASAT 225
Query 220 IRGIALP---GPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVN 276
L GPL R +TTGFLPQ FRDEMRLPW +QR FD M V VN
Sbjct 226 FAPKLLHPVVGPLNR-------FVTTGFLPQAFRDEMRLPWSVRQQRNFDRSMRVAALVN 278
Query 277 RLMPRFVREFPFNLMLWDLDRRMRRGRPLV 306
R P+ +R FP+N LWDL RR+ +G PLV
Sbjct 279 RFSPKILRMFPYNFYLWDLRRRIAKGIPLV 308
>gi|229491779|ref|ZP_04385600.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229321460|gb|EEN87260.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=297
Score = 285 bits (729), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 143/270 (53%), Positives = 178/270 (66%), Gaps = 10/270 (3%)
Query 40 EDSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAG 99
E ++ G+ LLA ANVIM+LA P VGYGV ES+VE+GRLDRHP+KR RTT TY+AVA
Sbjct 35 EKAMSGLGLLAAGANVIMQLARPAVGYGVYESKVETGRLDRHPVKRTRTTLTYLAVASLA 94
Query 100 SDDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMD 159
+D++K +RRAVN H V S S V Y+AFDPELQLWVAACLY+G DVY+ G++D
Sbjct 95 TDEEKKLYRRAVNGSHKHVRSDENSAVEYNAFDPELQLWVAACLYRGFEDVYKILYGDLD 154
Query 160 DEEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALR 219
D Y+ GTTLQ+ MWP DR AF+ YW ++LD+V ID+ +R++LY I +
Sbjct 155 PVTRDAFYQRSATFGTTLQMRRDMWPADRDAFEVYWNENLDKVAIDETIREHLYGIASAT 214
Query 220 IRGIALP---GPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVN 276
L GPL R +TTGFLPQ FRDEMRLPW +QR FD M V VN
Sbjct 215 FTPKLLHPVVGPLNR-------FVTTGFLPQAFRDEMRLPWSVRQQRNFDRSMRVAALVN 267
Query 277 RLMPRFVREFPFNLMLWDLDRRMRRGRPLV 306
R P+ +R FP+N LWDL RR+ +G PLV
Sbjct 268 RFSPKILRMFPYNFYLWDLRRRIAKGIPLV 297
>gi|226364850|ref|YP_002782632.1| hypothetical protein ROP_54400 [Rhodococcus opacus B4]
gi|226243339|dbj|BAH53687.1| hypothetical protein [Rhodococcus opacus B4]
Length=274
Score = 281 bits (719), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 143/262 (55%), Positives = 185/262 (71%), Gaps = 4/262 (1%)
Query 45 GVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQK 104
G LLAG ANVIM+L+ P VGYGV+ESRVESG++ RHPIKR RTT TY+ VA G++++K
Sbjct 17 GAGLLAGAANVIMQLSHPAVGYGVVESRVESGQIFRHPIKRTRTTLTYLVVAARGTEEEK 76
Query 105 AAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEAD 164
A FR+ VN+ HAQV S P+SPV Y+AFDPELQLWVAAC+Y G DV+R+ GE+ E++
Sbjct 77 AQFRKGVNRAHAQVKSGPDSPVQYNAFDPELQLWVAACIYHGFEDVHRSMHGELTATESE 136
Query 165 HHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIA 224
+ Y+ G GTTLQVP ++WP +RAAFD YW +SL V IDD +R+YL + +
Sbjct 137 YFYQQGATFGTTLQVPKELWPENRAAFDEYWEKSLANVSIDDTIREYLLSLAKVEF---- 192
Query 225 LPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVR 284
+P + RL + L TTGFLP FRD+M L W A QRRFD M+ + V+R +P VR
Sbjct 193 MPAVVSRLFGRLNLFFTTGFLPPLFRDQMHLTWTAKDQRRFDRTMSTIGAVSRRIPVTVR 252
Query 285 EFPFNLMLWDLDRRMRRGRPLV 306
E P+ L++ DL RRMR G+PLV
Sbjct 253 ELPYILLMRDLRRRMRTGKPLV 274
>gi|312137904|ref|YP_004005240.1| hypothetical protein REQ_04160 [Rhodococcus equi 103S]
gi|311887243|emb|CBH46552.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length=300
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/303 (46%), Positives = 193/303 (64%), Gaps = 10/303 (3%)
Query 10 PIPHVERPMADP------PRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELAMPG 63
P +++ P A+P R+++A R P D+L + G ANV+M+L+ P
Sbjct 2 PTRYLDLPGAEPRLTNERTRIRIATTPRRGGRPARIADALDFWSFAGGAANVVMQLSWPE 61
Query 64 VGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYSTPE 123
VG+GV ES+VESG L +HP KRARTTFTY++VA+ GSDD++ A+R AVN H V S
Sbjct 62 VGHGVAESKVESGSLAKHPWKRARTTFTYLSVAILGSDDERRAYREAVNGAHRYVRSDEN 121
Query 124 SPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVPPQM 183
SPVSY+AF+ ELQLWVAACL+ G D ++ G M E+A+ YR+ +GTTLQV M
Sbjct 122 SPVSYNAFNRELQLWVAACLFIGFEDTHQLLHGRMTPEQAEEFYRSSSTLGTTLQVTEDM 181
Query 184 WPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLITTG 243
WP RA FDRYW + +RV ID+ VRDYL ++ALR+ + PLR + + +TTG
Sbjct 182 WPATRADFDRYWNIACERVAIDETVRDYLNDLIALRM----VRPPLRLVFGDLLRFLTTG 237
Query 244 FLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMRRGR 303
FLP FR+++ + W+ +RRF+ L + VNR +PRFVR P +++ DL RR+R G+
Sbjct 238 FLPPLFREQLGMEWNEDDRRRFEHLFVFVSFVNRFVPRFVRHLPSRVLMRDLQRRIRSGK 297
Query 304 PLV 306
LV
Sbjct 298 RLV 300
>gi|325673329|ref|ZP_08153021.1| hypothetical protein HMPREF0724_10803 [Rhodococcus equi ATCC
33707]
gi|325555919|gb|EGD25589.1| hypothetical protein HMPREF0724_10803 [Rhodococcus equi ATCC
33707]
Length=300
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/303 (46%), Positives = 192/303 (64%), Gaps = 10/303 (3%)
Query 10 PIPHVERPMADP------PRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELAMPG 63
P +++ P A+P R+++A R P D+L + G ANV+M+L+ P
Sbjct 2 PTRYLDLPGAEPRLTNERTRIRIATTPRRGGRPARIADALDFWSFAGGAANVVMQLSWPE 61
Query 64 VGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYSTPE 123
VG+GV ES+VESG L +HP KRARTTFTY++VA+ GSDD++ A+R AVN H V S
Sbjct 62 VGHGVAESKVESGSLAKHPWKRARTTFTYLSVAILGSDDERRAYREAVNGAHRYVRSDEN 121
Query 124 SPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVPPQM 183
SPVSY+AFD ELQLWVAACL+ G D ++ G M +A+ YR+ +GTTLQV M
Sbjct 122 SPVSYNAFDRELQLWVAACLFIGFEDTHQLLHGRMTPGQAEEFYRSSSTLGTTLQVTEDM 181
Query 184 WPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLITTG 243
WP RA FDRYW + +RV ID+ VRDYL ++ALR+ + PLR + + +TTG
Sbjct 182 WPATRADFDRYWNIACERVAIDETVRDYLNDLLALRM----VRPPLRLVFGDLLRFLTTG 237
Query 244 FLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMRRGR 303
FLP FR+++ + W+ +RRF+ L + VNR +PRFVR P +++ DL RR+R G+
Sbjct 238 FLPPLFREQLGMEWNEDDRRRFEHLFVFVSFVNRFVPRFVRHLPSRVLMRDLQRRIRSGK 297
Query 304 PLV 306
LV
Sbjct 298 RLV 300
>gi|302530434|ref|ZP_07282776.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302439329|gb|EFL11145.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length=274
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/276 (54%), Positives = 180/276 (66%), Gaps = 11/276 (3%)
Query 32 SAAGPGGN-EDSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTF 90
+ A PG +D ++GV+LLAG ANVIM+L P VGYGVLESRV+SG L +HP+KR RTT
Sbjct 9 TEASPGRMLQDGVLGVSLLAGGANVIMQLGRPEVGYGVLESRVDSGNLFKHPLKRTRTTV 68
Query 91 TYVAVAVAGSDDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDV 150
TY+AVAV G+D +AA+RRAVN VHAQV ST SPV Y AFD ELQLWVAACL G DV
Sbjct 69 TYLAVAVLGTDADRAAYRRAVNAVHAQVVSTDASPVRYRAFDRELQLWVAACLAHGVEDV 128
Query 151 YRTFVGEMDDEEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRD 210
+R F+G E Y +GTTLQV P+ WP D AA YW + L RV IDD +R+
Sbjct 129 HRAFLGRPAPES---WYAEAAVLGTTLQVRPEDWPEDFAA---YWAEGLARVDIDDRLRE 182
Query 211 YLYPIVALRIRGIALPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMA 270
YL I L LP P L +TTGFLP+ FR++MRLPW A QRRFD LM
Sbjct 183 YLTAIANLEF----LPRPFSFLFGRFHRFVTTGFLPEVFREQMRLPWSAADQRRFDRLMR 238
Query 271 VLRTVNRLMPRFVREFPFNLMLWDLDRRMRRGRPLV 306
+ + +P VR FP++ L D RR+R+G+PLV
Sbjct 239 GIGRMVEPLPLRVRRFPYDACLADFRRRVRKGKPLV 274
>gi|333918388|ref|YP_004491969.1| hypothetical protein AS9A_0715 [Amycolicicoccus subflavus DQS3-9A1]
gi|333480609|gb|AEF39169.1| hypothetical protein AS9A_0715 [Amycolicicoccus subflavus DQS3-9A1]
Length=287
Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 132/260 (51%), Positives = 170/260 (66%), Gaps = 4/260 (1%)
Query 47 ALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAA 106
A LAG ANVIM+L++P VGYGV+ES V+SG++ HP+KR RTT +Y+AVA+ G+++++
Sbjct 32 AFLAGTANVIMQLSLPPVGYGVVESPVDSGKVTLHPVKRLRTTLSYLAVALHGTEEERLR 91
Query 107 FRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHH 166
+R AVN+ H Q+ S P SPV Y+AF P LQLWVAACLY G VD+ G + + +AD
Sbjct 92 YREAVNQSHRQIRSRPGSPVKYNAFSPRLQLWVAACLYYGIVDMTERLHGPIPETDADAL 151
Query 167 YRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALP 226
Y +GTTLQ+P ++WPPDRAAFD YWR +L IDD VRDYL +V L+ ALP
Sbjct 152 YDYCARLGTTLQMPQELWPPDRAAFDEYWRHTLAATSIDDTVRDYLAELVDLK----ALP 207
Query 227 GPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREF 286
P+R L+ I TG LP RDEMRLPW +R + + V R +P VR F
Sbjct 208 LPVRALAARPQRFIATGLLPPHLRDEMRLPWSERDERILAKGLTAIGMVYRRLPHIVRRF 267
Query 287 PFNLMLWDLDRRMRRGRPLV 306
P N LWD RRMR+ PLV
Sbjct 268 PMNFYLWDTRRRMRKNLPLV 287
>gi|145221027|ref|YP_001131705.1| hypothetical protein Mflv_0423 [Mycobacterium gilvum PYR-GCK]
gi|145213513|gb|ABP42917.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=285
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/288 (49%), Positives = 186/288 (65%), Gaps = 5/288 (1%)
Query 20 DPPRLQLARRR-RSAAGPGGNEDSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRL 78
+ R+Q+ RR R + P D++ + AG ANVIM+L+ PGVGYGV+ES+V+SG L
Sbjct 2 NANRIQITRRTARWSDDPVRVGDAMDFWSFAAGAANVIMQLSRPGVGYGVVESKVDSGNL 61
Query 79 DRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLW 138
+HP KRARTTF Y+AVA+ GSDD +AAFR AV++ H V STP SPV Y+AFD +LQ+W
Sbjct 62 MKHPWKRARTTFQYLAVAIFGSDDDRAAFRAAVDEAHRHVKSTPSSPVRYNAFDRDLQMW 121
Query 139 VAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQS 198
VAACL+ G D Y+ GEM E+ADH Y + +GTTLQV WPP RA FDRYW ++
Sbjct 122 VAACLFVGLEDTYQLLRGEMTAEQADHFYASAWTLGTTLQVTEDQWPPTRADFDRYWDEA 181
Query 199 LDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWD 258
+V +DDVVR YL +V LR+ L P R L + +T GFL FRD + L W
Sbjct 182 CGQVAMDDVVRSYLLDLVDLRMINPVLGIPFRPLLK----FLTAGFLAPVFRDALGLTWG 237
Query 259 ATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMRRGRPLV 306
+QR F+ L + VNR +P F+R+ +++L D+ R+RR R LV
Sbjct 238 DGRQRLFERLFLCVAFVNRFIPGFLRQGGSHVLLADVRMRVRRHRQLV 285
>gi|289758359|ref|ZP_06517737.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|308232074|ref|ZP_07663994.1| hypothetical protein TMAG_00429 [Mycobacterium tuberculosis SUMu001]
gi|308369666|ref|ZP_07666778.1| hypothetical protein TMBG_00787 [Mycobacterium tuberculosis SUMu002]
19 more sequence titles
Length=296
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 139/270 (52%), Positives = 176/270 (66%), Gaps = 12/270 (4%)
Query 41 DSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGS 100
D L A+L ANVIM+LA+PGVGYGVLES V+SG + +HP KRARTT TY+AVA G+
Sbjct 35 DLLNPAAMLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGT 94
Query 101 DDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDD 160
+ +A R AV+ H QV ST SPVSY+AFDP+LQLWVAACLY+ VD + G ++D
Sbjct 95 ESDRALIRGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLED 154
Query 161 EEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRI 220
AD Y+ +GTTLQVP MWPPDR AFD YW++SLD + ID VR++L
Sbjct 155 ATADAVYQDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHL-------- 206
Query 221 RGIA----LPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVN 276
RG+A LP PLR ++ L TTGFL FR M+L W +QRRF+ L++VLR +
Sbjct 207 RGVASVAFLPWPLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLAD 266
Query 277 RLMPRFVREFPFNLMLWDLDRRMRRGRPLV 306
RL+P F + L LWD+ R R GR +V
Sbjct 267 RLIPHRAWIFVYQLYLWDMRFRARHGRRIV 296
>gi|15841729|ref|NP_336766.1| hypothetical protein MT2296 [Mycobacterium tuberculosis CDC1551]
gi|148823445|ref|YP_001288199.1| hypothetical protein TBFG_12266 [Mycobacterium tuberculosis F11]
gi|167969362|ref|ZP_02551639.1| hypothetical protein MtubH3_15580 [Mycobacterium tuberculosis
H37Ra]
25 more sequence titles
Length=271
Score = 255 bits (651), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 139/270 (52%), Positives = 176/270 (66%), Gaps = 12/270 (4%)
Query 41 DSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGS 100
D L A+L ANVIM+LA+PGVGYGVLES V+SG + +HP KRARTT TY+AVA G+
Sbjct 10 DLLNPAAMLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGT 69
Query 101 DDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDD 160
+ +A R AV+ H QV ST SPVSY+AFDP+LQLWVAACLY+ VD + G ++D
Sbjct 70 ESDRALIRGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLED 129
Query 161 EEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRI 220
AD Y+ +GTTLQVP MWPPDR AFD YW++SLD + ID VR++L
Sbjct 130 ATADAVYQDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHL-------- 181
Query 221 RGIA----LPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVN 276
RG+A LP PLR ++ L TTGFL FR M+L W +QRRF+ L++VLR +
Sbjct 182 RGVASVAFLPWPLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLAD 241
Query 277 RLMPRFVREFPFNLMLWDLDRRMRRGRPLV 306
RL+P F + L LWD+ R R GR +V
Sbjct 242 RLIPHRAWIFVYQLYLWDMRFRARHGRRIV 271
>gi|315442001|ref|YP_004074880.1| hypothetical protein Mspyr1_03310 [Mycobacterium sp. Spyr1]
gi|315260304|gb|ADT97045.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length=285
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/288 (49%), Positives = 185/288 (65%), Gaps = 5/288 (1%)
Query 20 DPPRLQLARRR-RSAAGPGGNEDSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRL 78
+ R+Q+ RR R + P D++ + AG ANVIM+L+ PGVGYGV+ES+V+SG L
Sbjct 2 NANRIQITRRTARWSDDPVRVGDAMDFWSFAAGAANVIMQLSRPGVGYGVVESKVDSGNL 61
Query 79 DRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLW 138
+HP KRARTTF Y+AVA+ GSDD +AAFR AV++ H V STP SPV Y+AFD +LQ+W
Sbjct 62 MKHPWKRARTTFQYLAVAIFGSDDDRAAFRAAVDEAHRHVKSTPSSPVRYNAFDRDLQMW 121
Query 139 VAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQS 198
VAACL+ G D Y+ GEM E+AD Y + +GTTLQV WPP RA FDRYW ++
Sbjct 122 VAACLFVGLEDTYQLLRGEMTAEQADQFYASAWTLGTTLQVTEDQWPPTRADFDRYWDEA 181
Query 199 LDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWD 258
+V +DDVVR YL +V LR+ L P R L + +T GFL FRD + L W
Sbjct 182 CGQVAMDDVVRSYLLDLVNLRMINPVLGIPFRPLLK----FLTAGFLAPVFRDALGLTWG 237
Query 259 ATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMRRGRPLV 306
+QR F+ L + VNR +P F+R+ +++L D+ R+RR R LV
Sbjct 238 DGRQRLFERLFLSVAFVNRFIPGFLRQGGSHVLLADVRMRVRRHRQLV 285
>gi|340627241|ref|YP_004745693.1| hypothetical protein MCAN_22591 [Mycobacterium canettii CIPT
140010059]
gi|340005431|emb|CCC44591.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=255
Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 136/263 (52%), Positives = 173/263 (66%), Gaps = 12/263 (4%)
Query 48 LLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAF 107
+L ANVIM+LA+PGVGYGVLES V+SG + +HP KRARTT TY+AVA G++ +A
Sbjct 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
Query 108 RRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHY 167
R AV+ H QV ST SPVSY+AFDP+LQLWVAACLY+ VD + G ++D AD Y
Sbjct 61 RGAVDVAHRQVRSTTSSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
Query 168 RAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIA--- 224
+ +GTTLQVP MWPPDR AFD YW++SLD + ID VR++L RG+A
Sbjct 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHL--------RGVASVA 172
Query 225 -LPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFV 283
LP PLR ++ L TTGFL FR M+L W +QRRF+ L++VLR +RL+P
Sbjct 173 FLPWPLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRA 232
Query 284 REFPFNLMLWDLDRRMRRGRPLV 306
F + L LWD+ R R GR +V
Sbjct 233 WIFVYQLYLWDMRFRARHGRRIV 255
>gi|15609374|ref|NP_216753.1| hypothetical protein Rv2237 [Mycobacterium tuberculosis H37Rv]
gi|31793417|ref|NP_855910.1| hypothetical protein Mb2261 [Mycobacterium bovis AF2122/97]
gi|121638119|ref|YP_978343.1| hypothetical protein BCG_2254 [Mycobacterium bovis BCG str. Pasteur
1173P2]
30 more sequence titles
Length=255
Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 136/263 (52%), Positives = 173/263 (66%), Gaps = 12/263 (4%)
Query 48 LLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAF 107
+L ANVIM+LA+PGVGYGVLES V+SG + +HP KRARTT TY+AVA G++ +A
Sbjct 1 MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALI 60
Query 108 RRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHY 167
R AV+ H QV ST SPVSY+AFDP+LQLWVAACLY+ VD + G ++D AD Y
Sbjct 61 RGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVY 120
Query 168 RAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIA--- 224
+ +GTTLQVP MWPPDR AFD YW++SLD + ID VR++L RG+A
Sbjct 121 QDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREHL--------RGVASVA 172
Query 225 -LPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFV 283
LP PLR ++ L TTGFL FR M+L W +QRRF+ L++VLR +RL+P
Sbjct 173 FLPWPLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRA 232
Query 284 REFPFNLMLWDLDRRMRRGRPLV 306
F + L LWD+ R R GR +V
Sbjct 233 WIFVYQLYLWDMRFRARHGRRIV 255
>gi|54025229|ref|YP_119471.1| hypothetical protein nfa32600 [Nocardia farcinica IFM 10152]
gi|54016737|dbj|BAD58107.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=280
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/283 (50%), Positives = 174/283 (62%), Gaps = 22/283 (7%)
Query 29 RRRSAAGPGGNEDSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRART 88
RR AGPG ALL GPANVIM+L++P VG GV+ES VESGR D HP KR RT
Sbjct 15 RREFLAGPG---------ALLGGPANVIMQLSLPPVGRGVIESTVESGRFDLHPRKRGRT 65
Query 89 TFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGV 148
T TY+AVA+ G+D+++AA+R A + H V S P+SPV Y+AFDP+LQLWVAAC+Y+G V
Sbjct 66 TLTYLAVAMWGTDEERAAYRAATDSSHRHVRSGPDSPVKYNAFDPQLQLWVAACIYRGTV 125
Query 149 DVYRTFVGEMDDEEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVV 208
D G +DD AD YR GTTLQ+ P+MWP DRAAF YW + IDD V
Sbjct 126 DALTFLYGPLDDAAADELYRESARFGTTLQMRPEMWPADRAAFAEYWAAKSAEIAIDDEV 185
Query 209 RDYLYPIVALRIRGIALPGPLRRLSEGIAL-----LITTGFLPQRFRDEMRLPWDATKQR 263
+ YL + + GP RR+ E IA TTGFLPQRFRDE+ LPW +QR
Sbjct 186 KRYL-------LEQVVDLGPYRRI-ERIAFRHVNRFFTTGFLPQRFRDELGLPWGPRRQR 237
Query 264 RFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMRRGRPLV 306
F+ +M + V R P R +P + L D+ RR G+PLV
Sbjct 238 AFEVIMRAIGEVLRRGPERWRRYPLSKHLADMRRRRALGKPLV 280
>gi|41408086|ref|NP_960922.1| hypothetical protein MAP1988 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396441|gb|AAS04305.1| hypothetical protein MAP_1988 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336461848|gb|EGO40704.1| hypothetical protein MAPs_26850 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=271
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/266 (51%), Positives = 174/266 (66%), Gaps = 4/266 (1%)
Query 41 DSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGS 100
D L A L ANVIM+L++PGVGYGVLES V+SG + +HP KRARTT TY+A A G+
Sbjct 10 DLLNPAATLLPAANVIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAAATIGT 69
Query 101 DDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDD 160
D +A AV+ H QV S P SPVSY+AFDP+LQLWVAACLY+ VD + G +D+
Sbjct 70 DYDRALICAAVDVAHRQVRSRPSSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLHGPLDE 129
Query 161 EEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRI 220
AD YR +GTTLQVP +MWPP RAAFD YW++SLD + ID VR++L+ + +L
Sbjct 130 ASADAVYRDAARLGTTLQVPERMWPPARAAFDEYWKRSLDELRIDPPVREHLHGVASLAF 189
Query 221 RGIALPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMP 280
LP PLR L+ L TTGFL FR+ M+L W +QRRF L+ LR +RL+P
Sbjct 190 ----LPWPLRVLAGPFNLFATTGFLAPEFREMMQLDWTPAQQRRFGWLLFSLRLADRLIP 245
Query 281 RFVREFPFNLMLWDLDRRMRRGRPLV 306
+V + + LWD+ R R+GR +V
Sbjct 246 HWVWILGYRIYLWDMRSRARQGRRVV 271
>gi|118617013|ref|YP_905345.1| hypothetical protein MUL_1316 [Mycobacterium ulcerans Agy99]
gi|118569123|gb|ABL03874.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=271
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/248 (53%), Positives = 166/248 (67%), Gaps = 4/248 (1%)
Query 55 VIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKV 114
VIM+L++PGVGYGVLES V+SG + +HP KRARTT TY+AVA GS+ +A R AV+ V
Sbjct 24 VIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGSESDRALIRAAVDSV 83
Query 115 HAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMG 174
H QV ST SPVSY+AFDP+LQLWVAACLY+ V+ + G +DD AD Y +G
Sbjct 84 HRQVRSTSSSPVSYNAFDPKLQLWVAACLYRYFVEQHEFLHGPLDDGAADSVYLDAKRLG 143
Query 175 TTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSE 234
TTLQVP +MWPPDR AFD YW++SLD +HID VR++L + ++ LP PLR L+
Sbjct 144 TTLQVPERMWPPDRIAFDEYWKRSLDELHIDPPVREHLRGVASMAF----LPWPLRALAG 199
Query 235 GIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWD 294
L TTGFL FR MRL W ++Q RF+ L+A LR +RL+P + L LWD
Sbjct 200 PFNLFATTGFLAPEFRAMMRLDWSQSQQSRFEWLLAALRLADRLIPHRAWILIYQLYLWD 259
Query 295 LDRRMRRG 302
+ R RRG
Sbjct 260 MRFRARRG 267
>gi|54027031|ref|YP_121273.1| hypothetical protein nfa50570 [Nocardia farcinica IFM 10152]
gi|54018539|dbj|BAD59909.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=302
Score = 249 bits (635), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 128/266 (49%), Positives = 173/266 (66%), Gaps = 4/266 (1%)
Query 41 DSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGS 100
D+L + ANV M+++ PGVGYGV ES+V+SG L +HP KRARTT TY+AVA+ G+
Sbjct 41 DALDFWSFAGAAANVAMQMSHPGVGYGVAESKVDSGALMKHPWKRARTTTTYLAVAILGT 100
Query 101 DDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDD 160
D+++ A+R AV+ VH V S P + V Y+AFD LQLWVAACLY G D Y+ G+M D
Sbjct 101 DEERRAYREAVDAVHRHVRSEPGAKVKYNAFDRHLQLWVAACLYIGFEDTYQLLSGKMSD 160
Query 161 EEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRI 220
E+A+ Y + +GTTLQV MWP RA FD YW ++ ++ +DD VR Y+ ++ LR+
Sbjct 161 EQAEAFYASSSTLGTTLQVTEDMWPATRAEFDAYWNKACEQAVLDDHVRAYIDDLLNLRM 220
Query 221 RGIALPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMP 280
+L P R L + +TTGFL FR++MRL W A QRRF+ L + VNR +P
Sbjct 221 IHWSLRLPFRNLLK----FLTTGFLAPYFREQMRLEWTAADQRRFEHLFLFVGFVNRFIP 276
Query 281 RFVREFPFNLMLWDLDRRMRRGRPLV 306
RFVR +L++ DL RR RRG+ LV
Sbjct 277 RFVRHGGSHLLMADLKRRKRRGKNLV 302
>gi|333990300|ref|YP_004522914.1| hypothetical protein JDM601_1660 [Mycobacterium sp. JDM601]
gi|333486268|gb|AEF35660.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=269
Score = 248 bits (633), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 135/262 (52%), Positives = 177/262 (68%), Gaps = 5/262 (1%)
Query 41 DSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGS 100
D L A+L ANVIM+L++PGVGYGV ESRV+SG + +HP KRARTT TY+AVA G+
Sbjct 9 DLLNPAAMLLPAANVIMQLSLPGVGYGVQESRVDSGNVYKHPFKRARTTGTYLAVATIGT 68
Query 101 DDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDD 160
D+ + +R V+ VH QV STPESPV YHAFDP LQLWVAACLY+ VD + G +D
Sbjct 69 DEDRELYREWVDGVHRQVRSTPESPVRYHAFDPRLQLWVAACLYRYFVDQHEFLHGPLDA 128
Query 161 EEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRI 220
AD Y +GTTLQV +MWP DRAAFD YW++SLD + ID VR++LY + ++
Sbjct 129 AAADAIYADAKKLGTTLQVSDEMWPADRAAFDEYWKRSLDELRIDPPVREHLYGVASM-- 186
Query 221 RGIALPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMP 280
+ LP PL RL+ + L TTGFLP FR M+L W A++QRRF+ L++ LR +RL+P
Sbjct 187 --VFLPWPL-RLAGPLNLFATTGFLPAEFRQLMKLDWSASQQRRFEWLLSALRLADRLIP 243
Query 281 RFVREFPFNLMLWDLDRRMRRG 302
+ +++ LWD+ R R G
Sbjct 244 QRAWLLGYHVYLWDMRFRARTG 265
>gi|254427056|ref|ZP_05040763.1| hypothetical protein ADG881_286 [Alcanivorax sp. DG881]
gi|196193225|gb|EDX88184.1| hypothetical protein ADG881_286 [Alcanivorax sp. DG881]
Length=294
Score = 248 bits (633), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 124/265 (47%), Positives = 171/265 (65%), Gaps = 6/265 (2%)
Query 43 LMGVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDD 102
L +L+ AN+IM+LA+P VGYGV ESRV+SG + P KR RTTFTY+AVA+ G+++
Sbjct 35 LDSTVMLSAGANIIMQLALPAVGYGVAESRVKSGSVLHRPFKRTRTTFTYLAVAMMGTNE 94
Query 103 QKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEE 162
+K A+R+AVN H QVYST SPV Y+AFDPELQ+WVAACLY G VD Y+ + E
Sbjct 95 EKLAYRKAVNGAHRQVYSTDSSPVEYNAFDPELQMWVAACLYWGFVDTYQKVNRPLSHAE 154
Query 163 ADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRG 222
+ YR +GTTLQV MWP D F+ YW+ L + ID+ VR++L I L+
Sbjct 155 QEAFYRLSHPLGTTLQVRQDMWPKDLDGFEAYWQNGLKHLSIDERVREFLMIIADLKFL- 213
Query 223 IALPGPLRRLSEG-IALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPR 281
P+ + G ITTGFLPQ RD+M+L W+ KQR+F+ + + ++RL PR
Sbjct 214 ----SPVSQFLFGRFNRFITTGFLPQELRDQMQLEWNDDKQRKFERFVRMAGRISRLFPR 269
Query 282 FVREFPFNLMLWDLDRRMRRGRPLV 306
+R+ + L LWD RR+++G+PL+
Sbjct 270 PIRQAAYLLPLWDFRRRLKKGKPLI 294
>gi|183983302|ref|YP_001851593.1| hypothetical protein MMAR_3312 [Mycobacterium marinum M]
gi|183176628|gb|ACC41738.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=271
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/248 (53%), Positives = 165/248 (67%), Gaps = 4/248 (1%)
Query 55 VIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKV 114
VIM+L++PGVGYGVLES V+SG + +HP KRARTT TY+AVA GS+ +A R AV+ V
Sbjct 24 VIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGSESDRALIRAAVDSV 83
Query 115 HAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMG 174
H QV ST SPVSY+AFDP+LQLWVAACLY+ V+ + G +DD AD Y +G
Sbjct 84 HRQVRSTSSSPVSYNAFDPKLQLWVAACLYRYFVEQHEFLHGPLDDGAADSVYLDAKRLG 143
Query 175 TTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSE 234
TTLQVP +MWPPDR AF YW++SLD +HID VR++L + ++ LP PLR L+
Sbjct 144 TTLQVPERMWPPDRIAFVEYWKRSLDELHIDPPVREHLRGVASMAF----LPWPLRALAG 199
Query 235 GIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWD 294
L TTGFL FR MRL W ++Q RF+ L+A LR +RL+P + L LWD
Sbjct 200 PFNLFATTGFLAPEFRAMMRLDWSQSQQSRFEWLLAALRLADRLIPHRAWILIYQLYLWD 259
Query 295 LDRRMRRG 302
+ R RRG
Sbjct 260 MRFRARRG 267
>gi|343925379|ref|ZP_08764899.1| hypothetical protein GOALK_045_00200 [Gordonia alkanivorans NBRC
16433]
gi|343764645|dbj|GAA11825.1| hypothetical protein GOALK_045_00200 [Gordonia alkanivorans NBRC
16433]
Length=318
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 130/271 (48%), Positives = 173/271 (64%), Gaps = 6/271 (2%)
Query 36 PGGNEDSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAV 95
P + +G+ ++AG ANVIM+L++P VGYGV ESRV+SG L +HP+KR RTT +Y+AV
Sbjct 54 PSAQDLDPLGIGVIAGAANVIMQLSLPAVGYGVYESRVDSGNLFKHPLKRGRTTLSYLAV 113
Query 96 AVAGSDDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFV 155
A GS + A+R+A+ K HAQV ST +SPV Y+AFDP+LQLWVAACLY+G DV+R F
Sbjct 114 AGLGSAKDRKAYRKAIGKAHAQVRSTADSPVKYNAFDPKLQLWVAACLYRGTEDVHRIFG 173
Query 156 GEMDDEEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPI 215
G E D Y+AG +GTTLQVP + WP DR AF+ YW +++ + ID V+R YL I
Sbjct 174 GVT--EVTDEFYQAGAVLGTTLQVPREAWPADREAFEEYWNSTVETLEIDPVIRGYLLQI 231
Query 216 VALRIRGIALPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTV 275
G + L E +A+ GFLP FR +M + ++ F AVLR +
Sbjct 232 ARAEFLGPVVAKLLGWYFEILAI----GFLPDNFRRKMDVRLSPWQELFFAKHNAVLRAI 287
Query 276 NRLMPRFVREFPFNLMLWDLDRRMRRGRPLV 306
P+ VR FPFN++L D+ RMR GRPLV
Sbjct 288 ITRAPKPVRSFPFNVLLADVRWRMRTGRPLV 318
>gi|262204340|ref|YP_003275548.1| hypothetical protein Gbro_4522 [Gordonia bronchialis DSM 43247]
gi|262087687|gb|ACY23655.1| Protein of unknown function DUF2236 [Gordonia bronchialis DSM
43247]
Length=272
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/267 (48%), Positives = 176/267 (66%), Gaps = 6/267 (2%)
Query 39 NEDSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVA 98
N+ ++G +LAG ANVIM+LA+P VGYGV ES+V++G L +HP KR RTT +Y+AVA
Sbjct 11 NDIDMIGAGVLAGAANVIMQLAVPAVGYGVYESKVDAGNLFKHPFKRTRTTLSYLAVAAM 70
Query 99 GSDDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEM 158
GS + + A+R+AV K HA+V ST +SPV Y+AFDP+LQLWVAACLYKG DV R + G
Sbjct 71 GSPEDRKAYRKAVGKAHAKVRSTADSPVRYNAFDPKLQLWVAACLYKGTEDVLRIYGGR- 129
Query 159 DDEEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVAL 218
E D Y+AG MGTTLQVP +MWP RA F+ YW ++ + ID V+RD+L I +
Sbjct 130 -TEITDAEYQAGAVMGTTLQVPREMWPATRADFEEYWNSTVAELEIDPVIRDHLMAIARV 188
Query 219 RIRGIALPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRL 278
G + L E +AL GFLP+ FR +M + ++ F+A A+LR +
Sbjct 189 EFLGPVVSTLLGWWFEILAL----GFLPEEFRAKMGVRMKPWQKLLFNAHNALLRAIITR 244
Query 279 MPRFVREFPFNLMLWDLDRRMRRGRPL 305
+P+ +R+ P+NL+L D+ R+R GRPL
Sbjct 245 LPKPLRQLPYNLLLADVRWRIRTGRPL 271
>gi|254774912|ref|ZP_05216428.1| hypothetical protein MaviaA2_09595 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=271
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/255 (52%), Positives = 167/255 (66%), Gaps = 4/255 (1%)
Query 41 DSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGS 100
D L A L ANVIM+L++PGVGYGVLES V+SG + +HP KRARTT TY+A A G+
Sbjct 10 DLLNPAATLLPAANVIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAAATIGT 69
Query 101 DDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDD 160
D +A AV+ H QV S P SPVSY+AFDP+LQLWVAACLY+ VD + G +D+
Sbjct 70 DYDRALICAAVDVAHRQVRSRPSSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLHGPLDE 129
Query 161 EEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRI 220
AD YR +GTTLQVP +MWPPDRAAFD YW++SLD + ID VR++L+ + +L
Sbjct 130 ASADAVYRDAARLGTTLQVPERMWPPDRAAFDEYWKRSLDELRIDPPVREHLHGVASLAF 189
Query 221 RGIALPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMP 280
LP PLR L+ L TTGFL FR+ M+L W +QRRF L+ LR +RL+P
Sbjct 190 ----LPWPLRVLAGPFNLFATTGFLAPEFREMMQLDWTPAQQRRFGWLLFSLRLADRLIP 245
Query 281 RFVREFPFNLMLWDL 295
V + + LWD+
Sbjct 246 HGVWILGYRIYLWDM 260
>gi|118466074|ref|YP_881411.1| hypothetical protein MAV_2203 [Mycobacterium avium 104]
gi|118167361|gb|ABK68258.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=271
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/255 (52%), Positives = 167/255 (66%), Gaps = 4/255 (1%)
Query 41 DSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGS 100
D L A L ANVIM+L++PGVGYGVLES V+SG + +HP KRARTT TY+A A G+
Sbjct 10 DLLNPAATLLPAANVIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAAATIGT 69
Query 101 DDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDD 160
D +A AV+ H QV S P SPVSY+AFDP+LQLWVAACLY+ VD + G +D+
Sbjct 70 DYDRALICAAVDVAHRQVRSRPSSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLHGPLDE 129
Query 161 EEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRI 220
AD YR +GTTLQVP +MWPPDRAAFD YW++SLD + ID VR++L+ + +L
Sbjct 130 ASADAVYRDAARLGTTLQVPERMWPPDRAAFDEYWKRSLDELRIDPPVREHLHGVASLAF 189
Query 221 RGIALPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMP 280
LP PLR L+ L TTGFL FR+ M+L W +QRRF L+ LR +RL+P
Sbjct 190 ----LPWPLRVLAGPFNLFATTGFLAPEFREMMQLDWTPGQQRRFGWLLFSLRLADRLIP 245
Query 281 RFVREFPFNLMLWDL 295
V + + LWD+
Sbjct 246 HGVWILGYRIYLWDM 260
>gi|342857258|ref|ZP_08713914.1| hypothetical protein MCOL_00230 [Mycobacterium colombiense CECT
3035]
gi|342134591|gb|EGT87757.1| hypothetical protein MCOL_00230 [Mycobacterium colombiense CECT
3035]
Length=271
Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 130/252 (52%), Positives = 165/252 (66%), Gaps = 4/252 (1%)
Query 55 VIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKV 114
VIM+L++PGVGYGVLES V+SG + +HP KRARTT TY+A A G+ + AV+
Sbjct 24 VIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAAATIGTAYDRTLICAAVDVA 83
Query 115 HAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHHYRAGMAMG 174
H QV ST SPVSY+AFDP+LQLWVAACLY+ VD + G +DD AD Y+ +G
Sbjct 84 HRQVRSTSSSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLHGPLDDATADAVYQDASRLG 143
Query 175 TTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSE 234
TTLQVP +MWPPDRAAFD YW++SLD + ID VR++L + AL LP P+R L+
Sbjct 144 TTLQVPERMWPPDRAAFDEYWKRSLDELRIDPPVREHLRGVAALAF----LPWPVRVLAG 199
Query 235 GIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWD 294
L TTGFL FR+ M L W +QRRF L+A LR +RL+P F + L LWD
Sbjct 200 PFNLFATTGFLAPEFRELMGLDWSPGRQRRFGWLLAALRLADRLIPHRAWIFGYRLYLWD 259
Query 295 LDRRMRRGRPLV 306
+ R R+GR +V
Sbjct 260 MRSRARQGRRIV 271
>gi|326383584|ref|ZP_08205270.1| hypothetical protein SCNU_11635 [Gordonia neofelifaecis NRRL
B-59395]
gi|326197668|gb|EGD54856.1| hypothetical protein SCNU_11635 [Gordonia neofelifaecis NRRL
B-59395]
Length=287
Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 141/289 (49%), Positives = 186/289 (65%), Gaps = 10/289 (3%)
Query 20 DPPRLQLARRRRSAAGPGGNEDSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRLD 79
DP + RR G ++ ++G+ALL GPANVIM+LA+P VGYGV ES+VESG L
Sbjct 7 DPSVAERHSRRDELDGQTVDDLGMLGLALLGGPANVIMQLAVPAVGYGVYESKVESGNLF 66
Query 80 RHPIKRARTTFTYVAVAVAGSDDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWV 139
+ P KR RTT +Y+AVA GS + + +R+AVN+ H QV S +SPV Y+AFDP+LQLWV
Sbjct 67 KVPAKRTRTTLSYLAVAAMGSAEDRRRYRQAVNRAHVQVRSGDDSPVKYNAFDPKLQLWV 126
Query 140 AACLYKGGVDVYRTFVGEMD--DEEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQ 197
AACLY+G D R F G+ EEA YR G MGTTLQ+PP+MWP RA F+ YW +
Sbjct 127 AACLYRGWEDTQR-FFGDPSAITEEA---YRQGAVMGTTLQMPPEMWPATRADFEVYWNE 182
Query 198 SLDRVHIDDVVRDYLYPIVALRIRGIALPGPLRRLSEGIALLITTGFLPQRFRDEMRLPW 257
++D + IDD +RDYL IV + LP P+ + +T GFLP FRD+M +
Sbjct 183 TVDDLEIDDTIRDYLMKIVRMDF----LPRPVSLTMGWWSEAMTLGFLPPEFRDKMGVTM 238
Query 258 DATKQRRFDALMAVLRTVNRLMPRFVREFPFNLMLWDLDRRMRRGRPLV 306
++ F+ A+ R V R++PR +R FPFNL+L D+ RMR GRPLV
Sbjct 239 TRRQEFLFNTHNAIARRVLRVLPRQLRVFPFNLLLADVRWRMRTGRPLV 287
>gi|118473088|ref|YP_887893.1| hypothetical protein MSMEG_3590 [Mycobacterium smegmatis str.
MC2 155]
gi|118174375|gb|ABK75271.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=291
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 128/266 (49%), Positives = 170/266 (64%), Gaps = 4/266 (1%)
Query 41 DSLMGVALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGS 100
D++ A AG ANVIM+LA PGVG+GV+ES V+SG L +HP KRARTTF+Y+AVA+ G+
Sbjct 30 DAMDFWAFAAGAANVIMQLARPGVGHGVVESPVDSGNLLKHPWKRARTTFSYLAVAILGN 89
Query 101 DDQKAAFRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDD 160
D+ +AAFR AV+ H QV S P+SPV Y+AFD +LQ+WVAACL+ G D Y+ G M
Sbjct 90 DEDRAAFRTAVDGAHRQVRSGPQSPVRYNAFDRDLQMWVAACLFVGLEDTYQLLRGAMTP 149
Query 161 EEADHHYRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRI 220
E+A+ Y + +GTTLQV P WP RA FD YW + +V +DDVV YL +V L++
Sbjct 150 EQAEQFYASAATLGTTLQVSPDQWPATRAGFDDYWNAACGQVAVDDVVATYLRDLVHLKM 209
Query 221 RGIALPGPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMP 280
L P R L +TTGFL FR+ + L W +QR F+ L ++ NR +P
Sbjct 210 INPLLALPFRPLLA----FLTTGFLAPVFREVLGLKWGRGRQRLFEWLFLLVALGNRFLP 265
Query 281 RFVREFPFNLMLWDLDRRMRRGRPLV 306
FVR+ L+L D+ RR R G PL+
Sbjct 266 IFVRQGTSYLLLADVRRRARAGLPLI 291
>gi|54026721|ref|YP_120963.1| hypothetical protein nfa47470 [Nocardia farcinica IFM 10152]
gi|54018229|dbj|BAD59599.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=289
Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 124/260 (48%), Positives = 162/260 (63%), Gaps = 5/260 (1%)
Query 47 ALLAGPANVIMELAMPGVGYGVLESRVESGRLDRHPIKRARTTFTYVAVAVAGSDDQKAA 106
A L G ANVIM+L+ P V YGVLES V+SG++ HP KR RTT TY+AVA+ G+D ++ A
Sbjct 35 AFLGGTANVIMQLSHPPVAYGVLESTVDSGKVTLHPFKRLRTTLTYLAVAMMGTDAEREA 94
Query 107 FRRAVNKVHAQVYSTPESPVSYHAFDPELQLWVAACLYKGGVDVYRTFVGEMDDEEADHH 166
+R AVN H + ST ESPV Y+AFDP+LQLWVAACL+ G +D+ G +DD AD
Sbjct 95 YREAVNTSHRSIRSTAESPVKYNAFDPKLQLWVAACLFYGILDLEERLHGPLDDATADAL 154
Query 167 YRAGMAMGTTLQVPPQMWPPDRAAFDRYWRQSLDRVHIDDVVRDYLYPIVALRIRGIALP 226
Y +GTTLQ+ P+MWP DR AF YW L ID R Y ++ L + LP
Sbjct 155 YAYSARLGTTLQMRPEMWPADRQAFQEYWTAELATKSIDARTRAYFDGLIDLTM----LP 210
Query 227 GPLRRLSEGIALLITTGFLPQRFRDEMRLPWDATKQRRFDALMAVLRTVNRLMPRFVREF 286
PL RL+ + TG LP+ RDEM + W ++ L+ V+ ++R +PR +R F
Sbjct 211 LPL-RLNAPFHRFVVTGLLPEHLRDEMGMTWSPMREHALRLLLLVIGALHRRLPRALRLF 269
Query 287 PFNLMLWDLDRRMRRGRPLV 306
P N LWDL RR+R G+PLV
Sbjct 270 PMNFYLWDLRRRLRAGKPLV 289
Lambda K H
0.325 0.140 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 518193349062
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40