BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0278c
Length=957
Score E
Sequences producing significant alignments: (Bits) Value
gi|57116712|ref|YP_177707.1| PE-PGRS family protein [Mycobacteri... 1603 0.0
gi|148660044|ref|YP_001281567.1| PE-PGRS family protein [Mycobac... 1599 0.0
gi|339293336|gb|AEJ45447.1| PE-PGRS family protein [Mycobacteriu... 1586 0.0
gi|340625314|ref|YP_004743766.1| PE-PGRS family protein [Mycobac... 172 2e-40
gi|253797204|ref|YP_003030205.1| PE-PGRS family protein [Mycobac... 172 2e-40
gi|328456993|gb|AEB02416.1| PE family protein [Mycobacterium tub... 169 2e-39
gi|148821476|ref|YP_001286230.1| PE-PGRS family protein [Mycobac... 168 6e-39
gi|121636193|ref|YP_976416.1| PE-PGRS family protein [Mycobacter... 168 6e-39
gi|253797205|ref|YP_003030206.1| hypothetical protein TBMG_00283... 167 6e-39
gi|31791457|ref|NP_853950.1| PE-PGRS family protein [Mycobacteri... 167 7e-39
gi|224988667|ref|YP_002643354.1| PE-PGRS family protein [Mycobac... 167 9e-39
gi|121636194|ref|YP_976417.1| PE-PGRS family protein [Mycobacter... 167 1e-38
gi|31791458|ref|NP_853951.1| PE-PGRS family protein [Mycobacteri... 166 1e-38
gi|121636192|ref|YP_976415.1| PE-PGRS family protein [Mycobacter... 166 2e-38
gi|31791456|ref|NP_853949.1| hypothetical protein Mb0285c [Mycob... 166 2e-38
gi|340625315|ref|YP_004743767.1| PE-PGRS family protein [Mycobac... 160 9e-37
gi|340625316|ref|YP_004743768.1| PE-PGRS family protein [Mycobac... 159 3e-36
gi|344218100|gb|AEM98730.1| PE-PGRS family protein [Mycobacteriu... 156 2e-35
gi|253797206|ref|YP_003030207.1| PE-PGRS family protein [Mycobac... 155 2e-35
gi|57116713|ref|YP_177708.1| PE-PGRS family protein [Mycobacteri... 154 7e-35
gi|148660045|ref|YP_001281568.1| PE-PGRS family protein [Mycobac... 154 9e-35
gi|339630354|ref|YP_004721996.1| PE-PGRS family protein [Mycobac... 154 1e-34
gi|148821477|ref|YP_001286231.1| PE-PGRS family protein [Mycobac... 153 1e-34
gi|340626769|ref|YP_004745221.1| PE-PGRS family protein [Mycobac... 148 4e-33
gi|15839660|ref|NP_334697.1| PE_PGRS family protein [Mycobacteri... 139 2e-30
gi|183984370|ref|YP_001852661.1| PE-PGRS family protein [Mycobac... 133 2e-28
gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobac... 126 2e-26
gi|297634316|ref|ZP_06952096.1| PE-PGRS family protein [Mycobact... 125 4e-26
gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobac... 125 4e-26
gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobac... 124 6e-26
gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobac... 124 1e-25
gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobac... 124 1e-25
gi|183982702|ref|YP_001850993.1| PE-PGRS family protein, PE_PGRS... 119 3e-24
gi|183984369|ref|YP_001852660.1| PE-PGRS family protein, PE_PGRS... 117 1e-23
gi|118618448|ref|YP_906780.1| PE-PGRS family protein [Mycobacter... 115 3e-23
gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacter... 115 3e-23
gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobac... 115 4e-23
gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobac... 115 4e-23
gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacteri... 115 4e-23
gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobact... 115 5e-23
gi|183985176|ref|YP_001853467.1| PE-PGRS family protein, PE_PGRS... 114 1e-22
gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobact... 113 2e-22
gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobac... 112 3e-22
gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobac... 111 8e-22
gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobac... 110 2e-21
gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS... 108 4e-21
gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacteri... 105 3e-20
gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacteri... 105 5e-20
gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobac... 105 5e-20
gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobac... 105 5e-20
>gi|57116712|ref|YP_177707.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|7388393|sp|P56877.1|PG03_MYCTU RecName: Full=Uncharacterized PE-PGRS family protein PE_PGRS3;
Flags: Precursor
gi|41352752|emb|CAE55262.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=957
Score = 1603 bits (4151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 957/957 (100%), Positives = 957/957 (100%), Gaps = 0/957 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGNGGAGGLIGNGGAGGAGGV 180
GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGNGGAGGLIGNGGAGGAGGV
Sbjct 121 GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGNGGAGGLIGNGGAGGAGGV 180
Query 181 ASSGIGGSGGAGGNAMLFGAGGAGGAGGGVVALTGGAGGAGGAGGNAGLLFGAAGVGGAG 240
ASSGIGGSGGAGGNAMLFGAGGAGGAGGGVVALTGGAGGAGGAGGNAGLLFGAAGVGGAG
Sbjct 181 ASSGIGGSGGAGGNAMLFGAGGAGGAGGGVVALTGGAGGAGGAGGNAGLLFGAAGVGGAG 240
Query 241 GFTNGSALGGAGGAGGAGGLFATGGVGGSGGAGSSGGAGGAGGAGGLFGAGGTGGHGGFA 300
GFTNGSALGGAGGAGGAGGLFATGGVGGSGGAGSSGGAGGAGGAGGLFGAGGTGGHGGFA
Sbjct 241 GFTNGSALGGAGGAGGAGGLFATGGVGGSGGAGSSGGAGGAGGAGGLFGAGGTGGHGGFA 300
Query 301 DSSFGGVGGAGGAGGLFGAGGEGGSGGHSLVAGGDGGAGGNAGMLALGAAGGAGGIGGDG 360
DSSFGGVGGAGGAGGLFGAGGEGGSGGHSLVAGGDGGAGGNAGMLALGAAGGAGGIGGDG
Sbjct 301 DSSFGGVGGAGGAGGLFGAGGEGGSGGHSLVAGGDGGAGGNAGMLALGAAGGAGGIGGDG 360
Query 361 GTLTAGGIGGAGGAGGNAGLLFGSGGSGGAGGFGFADGGQGGPGGNAGTVFGSGGAGGNG 420
GTLTAGGIGGAGGAGGNAGLLFGSGGSGGAGGFGFADGGQGGPGGNAGTVFGSGGAGGNG
Sbjct 361 GTLTAGGIGGAGGAGGNAGLLFGSGGSGGAGGFGFADGGQGGPGGNAGTVFGSGGAGGNG 420
Query 421 GVGQGFAGGIGGAGGTPGLIGNGGNGGNGGASAVTGGNGGIGGTGVLIGNGGNGGSGGIG 480
GVGQGFAGGIGGAGGTPGLIGNGGNGGNGGASAVTGGNGGIGGTGVLIGNGGNGGSGGIG
Sbjct 421 GVGQGFAGGIGGAGGTPGLIGNGGNGGNGGASAVTGGNGGIGGTGVLIGNGGNGGSGGIG 480
Query 481 AGKAGVGGVSGLLLGLDGFNAPASTSPLHTLQQNVLNVVNEPFQTLTGRPLIGNGANGTP 540
AGKAGVGGVSGLLLGLDGFNAPASTSPLHTLQQNVLNVVNEPFQTLTGRPLIGNGANGTP
Sbjct 481 AGKAGVGGVSGLLLGLDGFNAPASTSPLHTLQQNVLNVVNEPFQTLTGRPLIGNGANGTP 540
Query 541 GTGADGGAGGWLFGNGANGTPGTGAAGGAGGWLFGNGGNGGHGATNTAATATGGAGGAGG 600
GTGADGGAGGWLFGNGANGTPGTGAAGGAGGWLFGNGGNGGHGATNTAATATGGAGGAGG
Sbjct 541 GTGADGGAGGWLFGNGANGTPGTGAAGGAGGWLFGNGGNGGHGATNTAATATGGAGGAGG 600
Query 601 ILFGTGGNGGTGGIATGAGGIGGAGGAGGVSLLIGSGGTGGNGGNSIGVAGIGGAGGRGG 660
ILFGTGGNGGTGGIATGAGGIGGAGGAGGVSLLIGSGGTGGNGGNSIGVAGIGGAGGRGG
Sbjct 601 ILFGTGGNGGTGGIATGAGGIGGAGGAGGVSLLIGSGGTGGNGGNSIGVAGIGGAGGRGG 660
Query 661 DAGLLFGAAGTGGHGAAGGVPAGVGGAGGNGGLFANGGAGGAGGFNAAGGNGGNGGLFGT 720
DAGLLFGAAGTGGHGAAGGVPAGVGGAGGNGGLFANGGAGGAGGFNAAGGNGGNGGLFGT
Sbjct 661 DAGLLFGAAGTGGHGAAGGVPAGVGGAGGNGGLFANGGAGGAGGFNAAGGNGGNGGLFGT 720
Query 721 GGTGGAGTNFGAGGNGGNGGLFGAGGTGGAAGSGGSGITTGGGGHGGNAGLLSLGASGGA 780
GGTGGAGTNFGAGGNGGNGGLFGAGGTGGAAGSGGSGITTGGGGHGGNAGLLSLGASGGA
Sbjct 721 GGTGGAGTNFGAGGNGGNGGLFGAGGTGGAAGSGGSGITTGGGGHGGNAGLLSLGASGGA 780
Query 781 GGSGGASSLAGGAGGTGGNGALLFGFRGAGGAGGHGGAALTSIQQGGAGGAGGNGGLLFG 840
GGSGGASSLAGGAGGTGGNGALLFGFRGAGGAGGHGGAALTSIQQGGAGGAGGNGGLLFG
Sbjct 781 GGSGGASSLAGGAGGTGGNGALLFGFRGAGGAGGHGGAALTSIQQGGAGGAGGNGGLLFG 840
Query 841 SAGAGGAGGSGANALGAGTGGTGGDGGHAGVFGNGGDGGCRRVWRRYRRQRWCRRQRRAD 900
SAGAGGAGGSGANALGAGTGGTGGDGGHAGVFGNGGDGGCRRVWRRYRRQRWCRRQRRAD
Sbjct 841 SAGAGGAGGSGANALGAGTGGTGGDGGHAGVFGNGGDGGCRRVWRRYRRQRWCRRQRRAD 900
Query 901 RQRRQRRQRRQSRGHARCRRHRRAAARRERTQRLAIAGRPATTRGVEGISCSPQMMP 957
RQRRQRRQRRQSRGHARCRRHRRAAARRERTQRLAIAGRPATTRGVEGISCSPQMMP
Sbjct 901 RQRRQRRQRRQSRGHARCRRHRRAAARRERTQRLAIAGRPATTRGVEGISCSPQMMP 957
>gi|148660044|ref|YP_001281567.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148504196|gb|ABQ72005.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=957
Score = 1599 bits (4141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 956/957 (99%), Positives = 956/957 (99%), Gaps = 0/957 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGNGGAGGLIGNGGAGGAGGV 180
GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGNGGAGGLIGNGGAGGAGGV
Sbjct 121 GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGNGGAGGLIGNGGAGGAGGV 180
Query 181 ASSGIGGSGGAGGNAMLFGAGGAGGAGGGVVALTGGAGGAGGAGGNAGLLFGAAGVGGAG 240
ASSGIGGSGGAGGNAMLFGAGGAGGAGGGVVALTGGAGGAGGAGGNAGLLFGAAGVGGAG
Sbjct 181 ASSGIGGSGGAGGNAMLFGAGGAGGAGGGVVALTGGAGGAGGAGGNAGLLFGAAGVGGAG 240
Query 241 GFTNGSALGGAGGAGGAGGLFATGGVGGSGGAGSSGGAGGAGGAGGLFGAGGTGGHGGFA 300
GFTNGSALGGAGGAGGAGGLFATGGVGGSGGAGSSGGAGGAGGAGGLFGAGGTGGHGGFA
Sbjct 241 GFTNGSALGGAGGAGGAGGLFATGGVGGSGGAGSSGGAGGAGGAGGLFGAGGTGGHGGFA 300
Query 301 DSSFGGVGGAGGAGGLFGAGGEGGSGGHSLVAGGDGGAGGNAGMLALGAAGGAGGIGGDG 360
DSSFGGVGGAGGAGGLFGAGGEGGSGGHSLVAGGDGGAGGNAGMLALGAAGGAGGIGGDG
Sbjct 301 DSSFGGVGGAGGAGGLFGAGGEGGSGGHSLVAGGDGGAGGNAGMLALGAAGGAGGIGGDG 360
Query 361 GTLTAGGIGGAGGAGGNAGLLFGSGGSGGAGGFGFADGGQGGPGGNAGTVFGSGGAGGNG 420
GTLTAGGIGGAGGAGGNAGLLFGSGGSGGAGGFGFADGGQGGPGGNAGTVFGSGGAGGNG
Sbjct 361 GTLTAGGIGGAGGAGGNAGLLFGSGGSGGAGGFGFADGGQGGPGGNAGTVFGSGGAGGNG 420
Query 421 GVGQGFAGGIGGAGGTPGLIGNGGNGGNGGASAVTGGNGGIGGTGVLIGNGGNGGSGGIG 480
GVGQGFAGGIGGAGGTPGLIGNGGNGGNGGASAVTGGNGGIGGTGVLIGNGGNGGSGGIG
Sbjct 421 GVGQGFAGGIGGAGGTPGLIGNGGNGGNGGASAVTGGNGGIGGTGVLIGNGGNGGSGGIG 480
Query 481 AGKAGVGGVSGLLLGLDGFNAPASTSPLHTLQQNVLNVVNEPFQTLTGRPLIGNGANGTP 540
AGKAGVGGVSGLLLGLDGFNAPASTSPLHTLQQNVLNVVNEPFQTLTGRPLIGNGANGTP
Sbjct 481 AGKAGVGGVSGLLLGLDGFNAPASTSPLHTLQQNVLNVVNEPFQTLTGRPLIGNGANGTP 540
Query 541 GTGADGGAGGWLFGNGANGTPGTGAAGGAGGWLFGNGGNGGHGATNTAATATGGAGGAGG 600
GTGADGGAGGWLFGNGANGTPGTGAAGGAGGWLFGNGGNGGHGATNTAATATGGAGGAGG
Sbjct 541 GTGADGGAGGWLFGNGANGTPGTGAAGGAGGWLFGNGGNGGHGATNTAATATGGAGGAGG 600
Query 601 ILFGTGGNGGTGGIATGAGGIGGAGGAGGVSLLIGSGGTGGNGGNSIGVAGIGGAGGRGG 660
ILFGTGGNGGTGGIATGAGGIGGAGGAGGVSLLIGSGGTGGNGGNSIGVAGIGGAGGRGG
Sbjct 601 ILFGTGGNGGTGGIATGAGGIGGAGGAGGVSLLIGSGGTGGNGGNSIGVAGIGGAGGRGG 660
Query 661 DAGLLFGAAGTGGHGAAGGVPAGVGGAGGNGGLFANGGAGGAGGFNAAGGNGGNGGLFGT 720
DAGLLFGAAGTGGHGAAGGVPAGVGGAGGNGGLFANGGAGGAGGFNAAGGNGGNGGLFGT
Sbjct 661 DAGLLFGAAGTGGHGAAGGVPAGVGGAGGNGGLFANGGAGGAGGFNAAGGNGGNGGLFGT 720
Query 721 GGTGGAGTNFGAGGNGGNGGLFGAGGTGGAAGSGGSGITTGGGGHGGNAGLLSLGASGGA 780
GGTGGAGTNFGAGGNGGNGGLFGAGGTGGAAGSGGSGITTGGGGHGGNAGLLSLGASGGA
Sbjct 721 GGTGGAGTNFGAGGNGGNGGLFGAGGTGGAAGSGGSGITTGGGGHGGNAGLLSLGASGGA 780
Query 781 GGSGGASSLAGGAGGTGGNGALLFGFRGAGGAGGHGGAALTSIQQGGAGGAGGNGGLLFG 840
GGSGGASSLAGGAGGTGGNGALLFGF GAGGAGGHGGAALTSIQQGGAGGAGGNGGLLFG
Sbjct 781 GGSGGASSLAGGAGGTGGNGALLFGFGGAGGAGGHGGAALTSIQQGGAGGAGGNGGLLFG 840
Query 841 SAGAGGAGGSGANALGAGTGGTGGDGGHAGVFGNGGDGGCRRVWRRYRRQRWCRRQRRAD 900
SAGAGGAGGSGANALGAGTGGTGGDGGHAGVFGNGGDGGCRRVWRRYRRQRWCRRQRRAD
Sbjct 841 SAGAGGAGGSGANALGAGTGGTGGDGGHAGVFGNGGDGGCRRVWRRYRRQRWCRRQRRAD 900
Query 901 RQRRQRRQRRQSRGHARCRRHRRAAARRERTQRLAIAGRPATTRGVEGISCSPQMMP 957
RQRRQRRQRRQSRGHARCRRHRRAAARRERTQRLAIAGRPATTRGVEGISCSPQMMP
Sbjct 901 RQRRQRRQRRQSRGHARCRRHRRAAARRERTQRLAIAGRPATTRGVEGISCSPQMMP 957
>gi|339293336|gb|AEJ45447.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079]
Length=957
Score = 1586 bits (4106), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 948/957 (99%), Positives = 952/957 (99%), Gaps = 0/957 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSI+AANAAAAANTTAL+AAGADEVSTA+AALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQF QALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN
Sbjct 61 AYQALSAQAQAFHAQFTQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGNGGAGGLIGNGGAGGAGGV 180
GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGNGGAGGLIGNGGAGGAGGV
Sbjct 121 GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGNGGAGGLIGNGGAGGAGGV 180
Query 181 ASSGIGGSGGAGGNAMLFGAGGAGGAGGGVVALTGGAGGAGGAGGNAGLLFGAAGVGGAG 240
ASSGIGGSGGAGGNAMLFGAGGAGGAGGGVVALTGGAGGAGGAGGNAGLLFGAAGVGGAG
Sbjct 181 ASSGIGGSGGAGGNAMLFGAGGAGGAGGGVVALTGGAGGAGGAGGNAGLLFGAAGVGGAG 240
Query 241 GFTNGSALGGAGGAGGAGGLFATGGVGGSGGAGSSGGAGGAGGAGGLFGAGGTGGHGGFA 300
GFTNGSALGGAGGAGGAGG+ ATGGVGGSGGAG SGGAGGAGGAGGLFGAGGTGGHGGFA
Sbjct 241 GFTNGSALGGAGGAGGAGGVVATGGVGGSGGAGGSGGAGGAGGAGGLFGAGGTGGHGGFA 300
Query 301 DSSFGGVGGAGGAGGLFGAGGEGGSGGHSLVAGGDGGAGGNAGMLALGAAGGAGGIGGDG 360
DSSFGGVGGAGGAGGLFGAGGEGGSGGHSLVAGGDGGAGGNAGMLALGAAGGAGGIGGDG
Sbjct 301 DSSFGGVGGAGGAGGLFGAGGEGGSGGHSLVAGGDGGAGGNAGMLALGAAGGAGGIGGDG 360
Query 361 GTLTAGGIGGAGGAGGNAGLLFGSGGSGGAGGFGFADGGQGGPGGNAGTVFGSGGAGGNG 420
GTLTAGGIGGAGGAGGNAGLLFGSGGSGGAGGFGFADGGQGGPGGNAGTVFGSGGAGGNG
Sbjct 361 GTLTAGGIGGAGGAGGNAGLLFGSGGSGGAGGFGFADGGQGGPGGNAGTVFGSGGAGGNG 420
Query 421 GVGQGFAGGIGGAGGTPGLIGNGGNGGNGGASAVTGGNGGIGGTGVLIGNGGNGGSGGIG 480
GVGQGFAGGIGGAGGTPGLIGNGGNGGNGGASAVTGGNGGIGGTGVLIGNGGNGGSGGIG
Sbjct 421 GVGQGFAGGIGGAGGTPGLIGNGGNGGNGGASAVTGGNGGIGGTGVLIGNGGNGGSGGIG 480
Query 481 AGKAGVGGVSGLLLGLDGFNAPASTSPLHTLQQNVLNVVNEPFQTLTGRPLIGNGANGTP 540
AGKAGVGGVSGLLLGLDGFNAPASTSPLHTLQQNVLNVVNEPFQTLTGRPLIGNGANGTP
Sbjct 481 AGKAGVGGVSGLLLGLDGFNAPASTSPLHTLQQNVLNVVNEPFQTLTGRPLIGNGANGTP 540
Query 541 GTGADGGAGGWLFGNGANGTPGTGAAGGAGGWLFGNGGNGGHGATNTAATATGGAGGAGG 600
GTGADGGAGGWLFGNGANGTPGTGAAGGAGGWLFGNGGNGGHGATNTAATATGGAGGAGG
Sbjct 541 GTGADGGAGGWLFGNGANGTPGTGAAGGAGGWLFGNGGNGGHGATNTAATATGGAGGAGG 600
Query 601 ILFGTGGNGGTGGIATGAGGIGGAGGAGGVSLLIGSGGTGGNGGNSIGVAGIGGAGGRGG 660
ILFGTGGNGGTGGIATGAGGIGGAGGAGGVSLLIGSGGTGGNGGNSIGVAGIGGAGGRGG
Sbjct 601 ILFGTGGNGGTGGIATGAGGIGGAGGAGGVSLLIGSGGTGGNGGNSIGVAGIGGAGGRGG 660
Query 661 DAGLLFGAAGTGGHGAAGGVPAGVGGAGGNGGLFANGGAGGAGGFNAAGGNGGNGGLFGT 720
DAGLLFGAAGTGGHGAAGGVPAGVGGAGGNGGLFANGGAGGAGGFNAAGGNGGNGGLFGT
Sbjct 661 DAGLLFGAAGTGGHGAAGGVPAGVGGAGGNGGLFANGGAGGAGGFNAAGGNGGNGGLFGT 720
Query 721 GGTGGAGTNFGAGGNGGNGGLFGAGGTGGAAGSGGSGITTGGGGHGGNAGLLSLGASGGA 780
GGTGGAGTNFGAGGNGGNGGLFGAGGTGGAAGSGGSGITTGGGGHGGNAGLLSLGASGGA
Sbjct 721 GGTGGAGTNFGAGGNGGNGGLFGAGGTGGAAGSGGSGITTGGGGHGGNAGLLSLGASGGA 780
Query 781 GGSGGASSLAGGAGGTGGNGALLFGFRGAGGAGGHGGAALTSIQQGGAGGAGGNGGLLFG 840
GGSGGASSLAGGAGGTGGNGALLFGF GAGGAGGHGGAALTSIQQGGAGGAGGNGGLLFG
Sbjct 781 GGSGGASSLAGGAGGTGGNGALLFGFGGAGGAGGHGGAALTSIQQGGAGGAGGNGGLLFG 840
Query 841 SAGAGGAGGSGANALGAGTGGTGGDGGHAGVFGNGGDGGCRRVWRRYRRQRWCRRQRRAD 900
SAGAGGAGGSGANALGAGTGGTGGDGGHAGVFGNGGDGGCRRVWRRYRRQRWCRRQRRAD
Sbjct 841 SAGAGGAGGSGANALGAGTGGTGGDGGHAGVFGNGGDGGCRRVWRRYRRQRWCRRQRRAD 900
Query 901 RQRRQRRQRRQSRGHARCRRHRRAAARRERTQRLAIAGRPATTRGVEGISCSPQMMP 957
RQRRQRRQRRQSRGHARCRRHRRAAARRERTQRLAIAGRPATTRGVEGISCSPQMMP
Sbjct 901 RQRRQRRQRRQSRGHARCRRHRRAAARRERTQRLAIAGRPATTRGVEGISCSPQMMP 957
>gi|340625314|ref|YP_004743766.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340003504|emb|CCC42625.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=729
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/137 (95%), Positives = 133/137 (98%), Gaps = 0/137 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSI+AANAAAAANTTAL+AAGADEVSTA+AALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQF QALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN
Sbjct 61 AYQALSAQAQAFHAQFTQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLIG 137
GAPGTGA+G GGWLIG
Sbjct 121 GAPGTGADGAPGGWLIG 137
>gi|253797204|ref|YP_003030205.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|253318707|gb|ACT23310.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|328456991|gb|AEB02414.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=967
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/136 (94%), Positives = 131/136 (97%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSI+AANAAAAANTTAL+AAGADEVSTA+AALFGAHGQ
Sbjct 36 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 95
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQF QALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNG N
Sbjct 96 AYQALSAQAQAFHAQFTQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGTN 155
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGA+G GGWLI
Sbjct 156 GAPGTGADGAPGGWLI 171
>gi|328456993|gb|AEB02416.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
Length=779
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/136 (100%), Positives = 136/136 (100%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ
Sbjct 8 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 67
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN
Sbjct 68 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 127
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 128 GAPGTGANGGDGGWLI 143
>gi|148821476|ref|YP_001286230.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148720003|gb|ABR04628.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|344218099|gb|AEM98729.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=906
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 136/136 (100%), Positives = 136/136 (100%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ
Sbjct 8 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 67
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN
Sbjct 68 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 127
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 128 GAPGTGANGGDGGWLI 143
>gi|121636193|ref|YP_976416.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224988666|ref|YP_002643353.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121491840|emb|CAL70303.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224771779|dbj|BAH24585.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600209|emb|CCC62879.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=899
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 136/136 (100%), Positives = 136/136 (100%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 121 GAPGTGANGGDGGWLI 136
>gi|253797205|ref|YP_003030206.1| hypothetical protein TBMG_00283 [Mycobacterium tuberculosis KZN
1435]
gi|253318708|gb|ACT23311.1| predicted protein [Mycobacterium tuberculosis KZN 1435]
Length=919
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 136/136 (100%), Positives = 136/136 (100%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ
Sbjct 8 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 67
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN
Sbjct 68 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 127
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 128 GAPGTGANGGDGGWLI 143
>gi|31791457|ref|NP_853950.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31617042|emb|CAD93150.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=877
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 136/136 (100%), Positives = 136/136 (100%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 121 GAPGTGANGGDGGWLI 136
>gi|224988667|ref|YP_002643354.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|224771780|dbj|BAH24586.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length=834
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 128/137 (94%), Positives = 132/137 (97%), Gaps = 0/137 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSI+AANAAAAANTTAL+AAGADEVSTA+AALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNGAN
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLIG 137
GAPGTGA+G GGWLIG
Sbjct 121 GAPGTGADGAPGGWLIG 137
>gi|121636194|ref|YP_976417.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121491841|emb|CAL70304.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|341600210|emb|CCC62880.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=834
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/137 (94%), Positives = 132/137 (97%), Gaps = 0/137 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSI+AANAAAAANTTAL+AAGADEVSTA+AALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNGAN
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLIG 137
GAPGTGA+G GGWLIG
Sbjct 121 GAPGTGADGAPGGWLIG 137
>gi|31791458|ref|NP_853951.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31617043|emb|CAD93151.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=831
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/137 (94%), Positives = 132/137 (97%), Gaps = 0/137 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSI+AANAAAAANTTAL+AAGADEVSTA+AALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNGAN
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLIG 137
GAPGTGA+G GGWLIG
Sbjct 121 GAPGTGADGAPGGWLIG 137
>gi|121636192|ref|YP_976415.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224988665|ref|YP_002643352.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121491839|emb|CAL70302.1| PE-PGRS family protein [first part] [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|224771778|dbj|BAH24584.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600208|emb|CCC62878.1| PE-PGRS family protein [first part] [Mycobacterium bovis BCG
str. Moreau RDJ]
Length=916
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/136 (93%), Positives = 130/136 (96%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSI+AANAAAAANTTAL+AAGADEVSTA+AALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQF QALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNGAN
Sbjct 61 AYQALSAQAQAFHAQFTQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGA+G GGWLI
Sbjct 121 GAPGTGADGAPGGWLI 136
>gi|31791456|ref|NP_853949.1| hypothetical protein Mb0285c [Mycobacterium bovis AF2122/97]
gi|31617041|emb|CAD93149.1| PE-PGRS FAMILY PROTEIN [FIRST PART] [Mycobacterium bovis AF2122/97]
Length=868
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/137 (93%), Positives = 131/137 (96%), Gaps = 0/137 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSI+AANAAAAANTTAL+AAGADEVSTA+AALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQF QALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNGAN
Sbjct 61 AYQALSAQAQAFHAQFTQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLIG 137
GAPGTGA+G GGWLIG
Sbjct 121 GAPGTGADGAPGGWLIG 137
>gi|340625315|ref|YP_004743767.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340003505|emb|CCC42626.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=899
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 133/136 (98%), Positives = 134/136 (99%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTAL+AAGADEVSTAIAALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALLAAGADEVSTAIAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNGAN
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 121 GAPGTGANGGDGGWLI 136
>gi|340625316|ref|YP_004743768.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340003506|emb|CCC42627.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=836
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 133/136 (98%), Positives = 134/136 (99%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTAL+AAGADEVSTAIAALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALLAAGADEVSTAIAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNGAN
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 121 GAPGTGANGGDGGWLI 136
>gi|344218100|gb|AEM98730.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=837
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/136 (96%), Positives = 132/136 (98%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSISAANAAAAANTTAL+AAGADEVSTA+AALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSISAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNG N
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 121 GAPGTGANGGDGGWLI 136
>gi|253797206|ref|YP_003030207.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|289552535|ref|ZP_06441745.1| predicted protein [Mycobacterium tuberculosis KZN 605]
gi|253318709|gb|ACT23312.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|289437167|gb|EFD19660.1| predicted protein [Mycobacterium tuberculosis KZN 605]
gi|328456994|gb|AEB02417.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=844
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/136 (96%), Positives = 132/136 (98%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSISAANAAAAANTTAL+AAGADEVSTA+AALFGAHGQ
Sbjct 8 MSFVIAAPEVIAAAATDLASLESSISAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 67
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNG N
Sbjct 68 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 127
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 128 GAPGTGANGGDGGWLI 143
>gi|57116713|ref|YP_177708.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|7441227|pir||E70835 hypothetical glycine-rich protein Rv0279c - Mycobacterium tuberculosis
(strain H37RV)
gi|41352753|emb|CAE55263.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=837
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 129/136 (95%), Positives = 132/136 (98%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSI+AANAAAAANTTAL+AAGADEVSTA+AALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNG N
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 121 GAPGTGANGGDGGWLI 136
>gi|148660045|ref|YP_001281568.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148504197|gb|ABQ72006.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=837
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 129/136 (95%), Positives = 132/136 (98%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSI+AANAAAAANTTAL+AAGADEVSTA+AALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNG N
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 121 GAPGTGANGGDGGWLI 136
>gi|339630354|ref|YP_004721996.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339329710|emb|CCC25353.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=837
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/136 (95%), Positives = 132/136 (98%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSI+AANAAAAANTTAL+AAGADEVSTA+AALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNG N
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 121 GAPGTGANGGDGGWLI 136
>gi|148821477|ref|YP_001286231.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148720004|gb|ABR04629.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
Length=837
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/136 (95%), Positives = 132/136 (98%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSI+AANAAAAANTTAL+AAGADEVSTA+AALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNG N
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 121 GAPGTGANGGDGGWLI 136
>gi|340626769|ref|YP_004745221.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004959|emb|CCC44107.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=914
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/136 (81%), Positives = 122/136 (90%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIA PE IAAAATDLA+LGS+I+ ANAAAAANTT+L+AAGADE+S AIAALFGAHG+
Sbjct 1 MSFVIAVPETIAAAATDLANLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQA SA+A AFH +FVQALT+GGGAYAAAEAAAV+PLL+ IN LA TGRPLI NGAN
Sbjct 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIANGAN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGD GWLI
Sbjct 121 GAPGTGANGGDAGWLI 136
>gi|15839660|ref|NP_334697.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13879780|gb|AAK44511.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=905
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/90 (99%), Positives = 90/90 (100%), Gaps = 0/90 (0%)
Query 47 VSTAIAALFGAHGQAYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFF 106
+STAIAALFGAHGQAYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFF
Sbjct 1 MSTAIAALFGAHGQAYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFF 60
Query 107 LANTGRPLIGNGANGAPGTGANGGDGGWLI 136
LANTGRPLIGNGANGAPGTGANGGDGGWLI
Sbjct 61 LANTGRPLIGNGANGAPGTGANGGDGGWLI 90
>gi|183984370|ref|YP_001852661.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183177696|gb|ACC42806.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=910
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/132 (63%), Positives = 102/132 (78%), Gaps = 3/132 (2%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MS+VIA P+++A AA++LA +GS++S A AAAA TT ++AA DEVS AIAA+F AHGQ
Sbjct 1 MSYVIAVPDLVAGAASELAGVGSTLSTATTAAAAQTTGVLAAAGDEVSAAIAAVFSAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSP---LLDPINEFFLANTGRPLIGN 117
+YQ LSAQA+ FHAQFVQAL++G AY AEAA+ SP LL IN + TGRPLIGN
Sbjct 61 SYQTLSAQAETFHAQFVQALSAGASAYTQAEAASASPLAGLLAAINAPVQSLTGRPLIGN 120
Query 118 GANGAPGTGANG 129
GANG PGTGA+G
Sbjct 121 GANGTPGTGADG 132
>gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178338|gb|ACC43448.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1451
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/126 (62%), Positives = 96/126 (77%), Gaps = 3/126 (2%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MS++IAAPE++ +AA DLA + S++SAAN +AA TT ++AAGADEVS AIAALFGAH Q
Sbjct 1 MSYLIAAPELMQSAAADLAGIESALSAANVSAAVPTTQILAAGADEVSAAIAALFGAHAQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSP---LLDPINEFFLANTGRPLIGN 117
AYQAL + AFH +FVQAL SG +YA AEAA+++P L D +N A GRPLIGN
Sbjct 61 AYQALGSHVTAFHQEFVQALNSGAASYANAEAASIAPLQALYDLVNAPTQALLGRPLIGN 120
Query 118 GANGAP 123
GANGAP
Sbjct 121 GANGAP 126
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/37 (57%), Positives = 23/37 (63%), Gaps = 4/37 (10%)
Query 504 STSPLHTLQQNVLNVVNEPFQTLTGRPLIGNGANGTP 540
S +PL L +VN P Q L GRPLIGNGANG P
Sbjct 94 SIAPLQALYD----LVNAPTQALLGRPLIGNGANGAP 126
>gi|297634316|ref|ZP_06952096.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=657
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/136 (82%), Positives = 122/136 (90%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIA PE IAAAATDLA LGS+I+ ANAAAAANTT+L+AAGADE+S AIAALFGAHG+
Sbjct 37 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 96
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
AYQA SA+A AFH +FVQALT+GGGAYAAAEAAAV+PLL+ IN LA TGRPLIGNGAN
Sbjct 97 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 156
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGD GWLI
Sbjct 157 GAPGTGANGGDAGWLI 172
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/38 (69%), Positives = 29/38 (77%), Gaps = 0/38 (0%)
Query 515 VLNVVNEPFQTLTGRPLIGNGANGTPGTGADGGAGGWL 552
+LN +N P TGRPLIGNGANG PGTGA+GG GWL
Sbjct 134 LLNSINAPVLAATGRPLIGNGANGAPGTGANGGDAGWL 171
>gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174555|gb|ACC39665.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=946
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/126 (56%), Positives = 91/126 (73%), Gaps = 9/126 (7%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
M+FV+ APE++ AAA+DLA++GS+I+ AN A AA T L+AAG DEVS AIA+LF H
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLAN------TGRPL 114
YQ+L A+ AFH QFV ALT+GGG Y++AEAAA +PL D +N + N GRPL
Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLN---VVNAPTQALLGRPL 117
Query 115 IGNGAN 120
IG+GA+
Sbjct 118 IGDGAD 123
>gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174556|gb|ACC39666.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=963
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/126 (56%), Positives = 91/126 (73%), Gaps = 9/126 (7%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
M+FV+ APE++ AAA+DLA++GS+I+ AN A AA T L+AAG DEVS AIA+LF H
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLAN------TGRPL 114
YQ+L A+ AFH QFV ALT+GGG Y++AEAAA +PL D +N + N GRPL
Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLN---VVNAPTQALLGRPL 117
Query 115 IGNGAN 120
IG+GA+
Sbjct 118 IGDGAD 123
>gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183176632|gb|ACC41742.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=965
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/126 (56%), Positives = 90/126 (72%), Gaps = 9/126 (7%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
M+FV+ APE++ AAA+DLA++GS+I+ AN A AA T L+AAG DEVS AIA+LF H
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLAN------TGRPL 114
YQ L A+ AFH QFV ALT+GGG Y++AEAAA +PL D +N + N GRPL
Sbjct 61 DYQNLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLN---VVNAPTQALLGRPL 117
Query 115 IGNGAN 120
IG+GA+
Sbjct 118 IGDGAD 123
>gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183175442|gb|ACC40552.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1386
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/125 (58%), Positives = 83/125 (67%), Gaps = 13/125 (10%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFV APE++A AA+DL LGS+ISAAN AAA +TT ++AAGADEVS IAALFG H
Sbjct 1 MSFVGVAPEMVAVAASDLERLGSTISAANVAAAGSTTTILAAGADEVSAVIAALFGTHAL 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPL----LDPINEFFLAN------T 110
YQA+S Q FH QFVQ LT+G GAY+AAE V PL D +N L N
Sbjct 61 EYQAISTQLSVFHEQFVQTLTNGVGAYSAAELVNVLPLQNVEQDLLN---LVNAPTQALF 117
Query 111 GRPLI 115
GRPLI
Sbjct 118 GRPLI 122
>gi|183982702|ref|YP_001850993.1| PE-PGRS family protein, PE_PGRS9_1 [Mycobacterium marinum M]
gi|183176028|gb|ACC41138.1| PE-PGRS family protein, PE_PGRS9_1 [Mycobacterium marinum M]
Length=893
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/130 (57%), Positives = 88/130 (68%), Gaps = 7/130 (5%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
M+FV+A P+++A AA DLA +GS I AAN AAA +TT ++AA DEVS AIAALF HGQ
Sbjct 1 MAFVLAVPDMVAGAAADLAGVGSVIDAANTAAAGSTTGIVAAAEDEVSAAIAALFSGHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDP-------INEFFLANTGRP 113
AYQ +SA+ FHAQF + L +G AY+ AEAA S L DP IN TGRP
Sbjct 61 AYQQISARVAEFHAQFERVLAAGAQAYSGAEAANASFLQDPLQTALNAINTPVQDLTGRP 120
Query 114 LIGNGANGAP 123
L+GNGANG P
Sbjct 121 LVGNGANGVP 130
>gi|183984369|ref|YP_001852660.1| PE-PGRS family protein, PE_PGRS9_3 [Mycobacterium marinum M]
gi|183177695|gb|ACC42805.1| PE-PGRS family protein, PE_PGRS9_3 [Mycobacterium marinum M]
Length=910
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/139 (64%), Positives = 101/139 (73%), Gaps = 3/139 (2%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFV PE +AAAA+DL +GS + ANA AA TT ++AAG DEVS AIAALF HGQ
Sbjct 1 MSFVNVTPEAVAAAASDLTGIGSVLGEANAVAARATTTVLAAGGDEVSAAIAALFSFHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSP---LLDPINEFFLANTGRPLIGN 117
+YQ L AQA+AFHAQF Q + +G G YA+AEAA +P LL +N TGRPLIGN
Sbjct 61 SYQTLGAQAEAFHAQFAQLMANGAGTYASAEAANAAPFQGLLGAVNAPVQTLTGRPLIGN 120
Query 118 GANGAPGTGANGGDGGWLI 136
GANGAPGTGANGG GGWLI
Sbjct 121 GANGAPGTGANGGAGGWLI 139
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/35 (86%), Positives = 31/35 (89%), Gaps = 0/35 (0%)
Query 519 VNEPFQTLTGRPLIGNGANGTPGTGADGGAGGWLF 553
VN P QTLTGRPLIGNGANG PGTGA+GGAGGWL
Sbjct 105 VNAPVQTLTGRPLIGNGANGAPGTGANGGAGGWLI 139
>gi|118618448|ref|YP_906780.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
gi|118570558|gb|ABL05309.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
Length=870
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/130 (54%), Positives = 87/130 (67%), Gaps = 7/130 (5%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
M+FV+A P+++A AA DLA +GS I AAN AAA +TT ++AA DEVS AIAALF HGQ
Sbjct 1 MAFVLAVPDMVAEAAADLAGVGSVIDAANTAAAGSTTGIVAAAEDEVSAAIAALFSGHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPI-------NEFFLANTGRP 113
AYQ +S + FHAQF + +G AY+ AEAA S L DP+ N+ TGRP
Sbjct 61 AYQQISTRVAEFHAQFERVFAAGVQAYSGAEAANASFLQDPLQTALNATNKPVQDLTGRP 120
Query 114 LIGNGANGAP 123
L+GNGANG P
Sbjct 121 LVGNGANGVP 130
>gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224989855|ref|YP_002644542.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121493027|emb|CAL71498.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224772968|dbj|BAH25774.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601399|emb|CCC64072.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=1399
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/122 (54%), Positives = 84/122 (69%), Gaps = 7/122 (5%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MS VI APE +AAAA D+A +GSSI AN+AAA +TT+++AAGADEVS AIA LFG+H +
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPL-------LDPINEFFLANTGRP 113
YQA+S Q AFH +F Q L++ G+Y +AEA +PL L+ +N A GRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 114 LI 115
LI
Sbjct 121 LI 122
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/26 (66%), Positives = 19/26 (74%), Gaps = 0/26 (0%)
Query 507 PLHTLQQNVLNVVNEPFQTLTGRPLI 532
PL TL+ NVLN +N P Q L GRPLI
Sbjct 97 PLATLEHNVLNALNAPTQALLGRPLI 122
>gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339330873|emb|CCC26544.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1389
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/122 (54%), Positives = 84/122 (69%), Gaps = 7/122 (5%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MS VI APE +AAAA D+A +GSSI AN+AAA +TT+++AAGADEVS AIA LFG+H +
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPL-------LDPINEFFLANTGRP 113
YQA+S Q AFH +F Q L++ G+Y +AEA +PL L+ +N A GRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 114 LI 115
LI
Sbjct 121 LI 122
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/26 (66%), Positives = 19/26 (74%), Gaps = 0/26 (0%)
Query 507 PLHTLQQNVLNVVNEPFQTLTGRPLI 532
PL TL+ NVLN +N P Q L GRPLI
Sbjct 97 PLATLEHNVLNALNAPTQALLGRPLI 122
>gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|253319014|gb|ACT23617.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|328457295|gb|AEB02718.1| hypothetical protein TBSG_00589 [Mycobacterium tuberculosis KZN
4207]
gi|344218399|gb|AEM99029.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1303
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/124 (54%), Positives = 81/124 (66%), Gaps = 2/124 (1%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFVIA PE++ AATDLA +GS+ A AAA ++ A ADEVS A+AALFG H Q
Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSP-LLDPINEFFLANTGRPLIGNGA 119
YQ +SAQ FH +FVQ L++ +Y AAEA V LL +N A GRPLIGNGA
Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119
Query 120 NGAP 123
+G+P
Sbjct 120 DGSP 123
>gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31618234|emb|CAD96152.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=1408
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/122 (54%), Positives = 84/122 (69%), Gaps = 7/122 (5%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MS VI APE +AAAA D+A +GSSI AN+AAA +TT+++AAGADEVS AIA LFG+H +
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPL-------LDPINEFFLANTGRP 113
YQA+S Q AFH +F Q L++ G+Y +AEA +PL L+ +N A GRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 114 LI 115
LI
Sbjct 121 LI 122
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/26 (66%), Positives = 19/26 (74%), Gaps = 0/26 (0%)
Query 507 PLHTLQQNVLNVVNEPFQTLTGRPLI 532
PL TL+ NVLN +N P Q L GRPLI
Sbjct 97 PLATLEHNVLNALNAPTQALLGRPLI 122
>gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobacterium tuberculosis CCDC5079]
Length=1330
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/122 (53%), Positives = 84/122 (69%), Gaps = 7/122 (5%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MS VI PE +AAAA+D+A +GSSI AN+AAA +TT+++AAGADEVS AIA LFG+H +
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPL-------LDPINEFFLANTGRP 113
YQA+S Q AFH +F Q L++ G+Y +AEA +PL L+ +N A GRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 114 LI 115
LI
Sbjct 122 LI 123
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/26 (66%), Positives = 19/26 (74%), Gaps = 0/26 (0%)
Query 507 PLHTLQQNVLNVVNEPFQTLTGRPLI 532
PL TL+ NVLN +N P Q L GRPLI
Sbjct 98 PLATLEHNVLNALNAPTQALLGRPLI 123
>gi|183985176|ref|YP_001853467.1| PE-PGRS family protein, PE_PGRS9_2 [Mycobacterium marinum M]
gi|183178502|gb|ACC43612.1| PE-PGRS family protein, PE_PGRS9_2 [Mycobacterium marinum M]
Length=846
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/138 (54%), Positives = 92/138 (67%), Gaps = 13/138 (9%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MS+V+A PE+I AAA A+ AAA+ TT ++AA DEVS AIA + +HGQ
Sbjct 1 MSYVMAVPEIIEAAA------------ADLAAASQTTQIVAAAEDEVSAAIATVLSSHGQ 48
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
YQ LSA+A FH + QAL++G GAY+ AEA++ LL +NE A TGRPLIGNGAN
Sbjct 49 GYQVLSARALEFHTRLAQALSAGAGAYSGAEASSAG-LLAAVNEPIAALTGRPLIGNGAN 107
Query 121 GAPGTGANGGDGGWLIGN 138
G PG G +G GGWLIGN
Sbjct 108 GTPGLGTDGAPGGWLIGN 125
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/53 (63%), Positives = 35/53 (67%), Gaps = 8/53 (15%)
Query 499 FNAPASTSPLHTLQQNVLNVVNEPFQTLTGRPLIGNGA--------NGTPGTG 543
FNAPASTS LH LQQ L V+NEP Q LTGRPLIGNG +GTPG
Sbjct 454 FNAPASTSALHNLQQQALGVINEPTQALTGRPLIGNGTPGAAGSGTDGTPGGW 506
>gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobacterium tuberculosis CCDC5180]
Length=1330
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/122 (52%), Positives = 84/122 (69%), Gaps = 7/122 (5%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MS VI PE +AAAA+D+A +GSSI AN+AAA +TT+++AAGAD+VS AIA LFG+H +
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADDVSAAIATLFGSHAR 61
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPL-------LDPINEFFLANTGRP 113
YQA+S Q AFH +F Q L++ G+Y +AEA +PL L+ +N A GRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 114 LI 115
LI
Sbjct 122 LI 123
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/26 (66%), Positives = 19/26 (74%), Gaps = 0/26 (0%)
Query 507 PLHTLQQNVLNVVNEPFQTLTGRPLI 532
PL TL+ NVLN +N P Q L GRPLI
Sbjct 98 PLATLEHNVLNALNAPTQALLGRPLI 123
>gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174290|gb|ACC39400.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1425
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/121 (55%), Positives = 80/121 (67%), Gaps = 1/121 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSF + P+++ AAA DLA +G++I + AAAA+TT L+ A ADEVS AIA+LFG H
Sbjct 1 MSFTVVEPQMLTAAAADLAKIGAAIDTVSTAAAASTTNLLPAAADEVSAAIASLFGTHAL 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSP-LLDPINEFFLANTGRPLIGNGA 119
AYQA+ AQA FH FVQAL+ YAA E A V LL IN A GRPLIGNGA
Sbjct 61 AYQAIGAQAATFHDGFVQALSRAASRYAATEVANVEQNLLGLINAPTQALFGRPLIGNGA 120
Query 120 N 120
+
Sbjct 121 D 121
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/27 (60%), Positives = 22/27 (82%), Gaps = 0/27 (0%)
Query 511 LQQNVLNVVNEPFQTLTGRPLIGNGAN 537
++QN+L ++N P Q L GRPLIGNGA+
Sbjct 95 VEQNLLGLINAPTQALFGRPLIGNGAD 121
>gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174786|gb|ACC39896.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1483
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/121 (60%), Positives = 85/121 (71%), Gaps = 1/121 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MSFV APE++AAA DLA +GSSISAANAAA A TT ++ A ADEVS AIAALFG+H +
Sbjct 1 MSFVNVAPEMVAAAVEDLAGIGSSISAANAAAVALTTDVVPAAADEVSAAIAALFGSHAR 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAA-AVSPLLDPINEFFLANTGRPLIGNGA 119
YQA+SAQ+ AFH + VQ L SG AY E A A LL+ +N A GRPLIGNG
Sbjct 61 EYQAISAQSAAFHERLVQTLRSGASAYLGTELANAQQNLLNAVNGPTQAWLGRPLIGNGT 120
Query 120 N 120
+
Sbjct 121 D 121
>gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004656|emb|CCC43800.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1006
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/122 (52%), Positives = 84/122 (69%), Gaps = 7/122 (5%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MS VI PE++AAAA+D+A +GS AAN+ AA +TT+++AAGADEVS AIA LFG+H +
Sbjct 1 MSLVIVTPELVAAAASDVARIGSGFGAANSTAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPL-------LDPINEFFLANTGRP 113
YQA+S Q AFH +FVQ L++ G+Y +AEA +PL L+ +N A GRP
Sbjct 61 EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 114 LI 115
LI
Sbjct 121 LI 122
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/26 (66%), Positives = 19/26 (74%), Gaps = 0/26 (0%)
Query 507 PLHTLQQNVLNVVNEPFQTLTGRPLI 532
PL TL+ NVLN +N P Q L GRPLI
Sbjct 97 PLATLEHNVLNALNAPTQALLGRPLI 122
>gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M]
gi|183175990|gb|ACC41100.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M]
Length=2118
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/133 (53%), Positives = 87/133 (66%), Gaps = 10/133 (7%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MS V +PE++A AA+DLA +GSS+ AANAAAA TT +++A ADEVS AIA LFG H
Sbjct 1 MSLVTVSPELVAGAASDLARIGSSLGAANAAAAGPTTTVLSAAADEVSVAIATLFGTHAA 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAE---AAAVSPL-------LDPINEFFLANT 110
YQ+LSA+ AFH QFVQ LTSG G Y + E A+ +S L L+ IN +
Sbjct 61 EYQSLSARMAAFHEQFVQTLTSGAGIYVSTEATNASFISALQLAEQNALNAINAPTQSWL 120
Query 111 GRPLIGNGANGAP 123
GRPLIGNG + P
Sbjct 121 GRPLIGNGVDATP 133
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query 491 GLLLGLDGFNAPASTSPLHTLQQNVLNVVNEPFQTLTGRPLIGNGANGTP 540
G+ + + NA + S L +QN LN +N P Q+ GRPLIGNG + TP
Sbjct 85 GIYVSTEATNA-SFISALQLAEQNALNAINAPTQSWLGRPLIGNGVDATP 133
>gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|7441217|pir||E70917 hypothetical glycine-rich protein Rv1450c - Mycobacterium tuberculosis
(strain H37RV)
gi|38490271|emb|CAE55390.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=1329
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/122 (55%), Positives = 85/122 (70%), Gaps = 7/122 (5%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MS VI APE +AAAA D+A +GSSI AANAAAA +TT+++AAGADEVS AIA LFG+H +
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPL-------LDPINEFFLANTGRP 113
YQA+S Q AFH +F Q L++ G+Y +AEA +PL L+ +N A GRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 114 LI 115
LI
Sbjct 121 LI 122
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/26 (66%), Positives = 19/26 (74%), Gaps = 0/26 (0%)
Query 507 PLHTLQQNVLNVVNEPFQTLTGRPLI 532
PL TL+ NVLN +N P Q L GRPLI
Sbjct 97 PLATLEHNVLNALNAPTQALLGRPLI 122
>gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13881112|gb|AAK45760.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=1408
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/122 (55%), Positives = 85/122 (70%), Gaps = 7/122 (5%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MS VI APE +AAAA D+A +GSSI AANAAAA +TT+++AAGADEVS AIA LFG+H +
Sbjct 2 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPL-------LDPINEFFLANTGRP 113
YQA+S Q AFH +F Q L++ G+Y +AEA +PL L+ +N A GRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 114 LI 115
LI
Sbjct 122 LI 123
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/26 (66%), Positives = 19/26 (74%), Gaps = 0/26 (0%)
Query 507 PLHTLQQNVLNVVNEPFQTLTGRPLI 532
PL TL+ NVLN +N P Q L GRPLI
Sbjct 98 PLATLEHNVLNALNAPTQALLGRPLI 123
>gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148505394|gb|ABQ73203.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=1398
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/122 (55%), Positives = 85/122 (70%), Gaps = 7/122 (5%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MS VI APE +AAAA D+A +GSSI AANAAAA +TT+++AAGADEVS AIA LFG+H +
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPL-------LDPINEFFLANTGRP 113
YQA+S Q AFH +F Q L++ G+Y +AEA +PL L+ +N A GRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 114 LI 115
LI
Sbjct 121 LI 122
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/26 (66%), Positives = 19/26 (74%), Gaps = 0/26 (0%)
Query 507 PLHTLQQNVLNVVNEPFQTLTGRPLI 532
PL TL+ NVLN +N P Q L GRPLI
Sbjct 97 PLATLEHNVLNALNAPTQALLGRPLI 122
>gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148721196|gb|ABR05821.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|344219280|gb|AEM99910.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1407
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/122 (55%), Positives = 85/122 (70%), Gaps = 7/122 (5%)
Query 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
MS VI APE +AAAA D+A +GSSI AANAAAA +TT+++AAGADEVS AIA LFG+H +
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPL-------LDPINEFFLANTGRP 113
YQA+S Q AFH +F Q L++ G+Y +AEA +PL L+ +N A GRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 114 LI 115
LI
Sbjct 121 LI 122
Lambda K H
0.311 0.141 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2368893372216
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40