BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0279c
Length=837
Score E
Sequences producing significant alignments: (Bits) Value
gi|57116713|ref|YP_177708.1| PE-PGRS family protein [Mycobacteri... 1344 0.0
gi|344218100|gb|AEM98730.1| PE-PGRS family protein [Mycobacteriu... 1310 0.0
gi|148821477|ref|YP_001286231.1| PE-PGRS family protein [Mycobac... 1310 0.0
gi|253797206|ref|YP_003030207.1| PE-PGRS family protein [Mycobac... 1309 0.0
gi|339630354|ref|YP_004721996.1| PE-PGRS family protein [Mycobac... 1306 0.0
gi|148660045|ref|YP_001281568.1| PE-PGRS family protein [Mycobac... 1306 0.0
gi|224988667|ref|YP_002643354.1| PE-PGRS family protein [Mycobac... 174 4e-41
gi|121636194|ref|YP_976417.1| PE-PGRS family protein [Mycobacter... 174 5e-41
gi|31791458|ref|NP_853951.1| PE-PGRS family protein [Mycobacteri... 174 7e-41
gi|253797204|ref|YP_003030205.1| PE-PGRS family protein [Mycobac... 173 1e-40
gi|121636192|ref|YP_976415.1| PE-PGRS family protein [Mycobacter... 172 2e-40
gi|31791456|ref|NP_853949.1| hypothetical protein Mb0285c [Mycob... 172 2e-40
gi|340625314|ref|YP_004743766.1| PE-PGRS family protein [Mycobac... 168 3e-39
gi|340625315|ref|YP_004743767.1| PE-PGRS family protein [Mycobac... 157 9e-36
gi|339293336|gb|AEJ45447.1| PE-PGRS family protein [Mycobacteriu... 157 1e-35
gi|340625316|ref|YP_004743768.1| PE-PGRS family protein [Mycobac... 155 2e-35
gi|328456993|gb|AEB02416.1| PE family protein [Mycobacterium tub... 155 3e-35
gi|253797205|ref|YP_003030206.1| hypothetical protein TBMG_00283... 153 2e-34
gi|148660044|ref|YP_001281567.1| PE-PGRS family protein [Mycobac... 152 2e-34
gi|31791457|ref|NP_853950.1| PE-PGRS family protein [Mycobacteri... 152 2e-34
gi|148821476|ref|YP_001286230.1| PE-PGRS family protein [Mycobac... 152 2e-34
gi|121636193|ref|YP_976416.1| PE-PGRS family protein [Mycobacter... 152 2e-34
gi|57116712|ref|YP_177707.1| PE-PGRS family protein [Mycobacteri... 152 2e-34
gi|340626769|ref|YP_004745221.1| PE-PGRS family protein [Mycobac... 137 6e-30
gi|15839660|ref|NP_334697.1| PE_PGRS family protein [Mycobacteri... 132 2e-28
gi|183984370|ref|YP_001852661.1| PE-PGRS family protein [Mycobac... 128 6e-27
gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobac... 125 5e-26
gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobac... 115 3e-23
gi|183985176|ref|YP_001853467.1| PE-PGRS family protein, PE_PGRS... 114 5e-23
gi|253799200|ref|YP_003032201.1| PE-PGRS family protein [Mycobac... 114 8e-23
gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobac... 114 8e-23
gi|297634316|ref|ZP_06952096.1| PE-PGRS family protein [Mycobact... 114 9e-23
gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobac... 114 9e-23
gi|344219580|gb|AEN00211.1| PE-PGRS family protein [Mycobacteriu... 114 1e-22
gi|148822970|ref|YP_001287724.1| PE-PGRS family protein [Mycobac... 114 1e-22
gi|289554468|ref|ZP_06443678.1| predicted protein [Mycobacterium... 114 1e-22
gi|183984369|ref|YP_001852660.1| PE-PGRS family protein, PE_PGRS... 113 2e-22
gi|57116905|ref|YP_177831.1| PE-PGRS family protein [Mycobacteri... 113 2e-22
gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted p... 113 2e-22
gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobac... 112 2e-22
gi|183982951|ref|YP_001851242.1| PE-PGRS family protein [Mycobac... 112 2e-22
gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobac... 112 3e-22
gi|183985312|ref|YP_001853603.1| PE-PGRS family protein [Mycobac... 111 5e-22
gi|340628625|ref|YP_004747077.1| PE-PGRS family protein [Mycobac... 111 6e-22
gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacter... 110 1e-21
gi|340626105|ref|YP_004744557.1| PE-PGRS family protein [Mycobac... 110 2e-21
gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacteri... 109 2e-21
gi|57116821|ref|YP_177783.1| PE-PGRS family protein [Mycobacteri... 107 6e-21
gi|340626099|ref|YP_004744551.1| PE-PGRS family protein [Mycobac... 107 8e-21
gi|183985330|ref|YP_001853621.1| PE-PGRS family protein [Mycobac... 107 1e-20
>gi|57116713|ref|YP_177708.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|7441227|pir||E70835 hypothetical glycine-rich protein Rv0279c - Mycobacterium tuberculosis
(strain H37RV)
gi|41352753|emb|CAE55263.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=837
Score = 1344 bits (3479), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 837/837 (100%), Positives = 837/837 (100%), Gaps = 0/837 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
Query 121 GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLIGNGGAGGAGGRASTGTG 180
GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLIGNGGAGGAGGRASTGTG
Sbjct 121 GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLIGNGGAGGAGGRASTGTG 180
Query 181 GAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGT 240
GAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGT
Sbjct 181 GAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGT 240
Query 241 GGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGN 300
GGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGN
Sbjct 241 GGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGN 300
Query 301 GGAGGDAGMLSLGAAGGAGGSGGSNPDGGGGAGGIGGDGGTLFGSGGAGGVCGLGFDAGG 360
GGAGGDAGMLSLGAAGGAGGSGGSNPDGGGGAGGIGGDGGTLFGSGGAGGVCGLGFDAGG
Sbjct 301 GGAGGDAGMLSLGAAGGAGGSGGSNPDGGGGAGGIGGDGGTLFGSGGAGGVCGLGFDAGG 360
Query 361 AGGAGGKAGLLIGAGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAA 420
AGGAGGKAGLLIGAGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAA
Sbjct 361 AGGAGGKAGLLIGAGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAA 420
Query 421 GGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILN 480
GGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILN
Sbjct 421 GGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILN 480
Query 481 AINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAG 540
AINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAG
Sbjct 481 AINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAG 540
Query 541 GILSGIGGTGGSGGIGTTGQGGTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGL 600
GILSGIGGTGGSGGIGTTGQGGTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGL
Sbjct 541 GILSGIGGTGGSGGIGTTGQGGTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGL 600
Query 601 FLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGGAGGFGANGGTGGNGLLFGAG 660
FLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGGAGGFGANGGTGGNGLLFGAG
Sbjct 601 FLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGGAGGFGANGGTGGNGLLFGAG 660
Query 661 GTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGG 720
GTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGG
Sbjct 661 GTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGG 720
Query 721 SGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFGNGGD 780
SGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFGNGGD
Sbjct 721 SGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFGNGGD 780
Query 781 GGAGGFGADTGGNSSSVPNAVLIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL 837
GGAGGFGADTGGNSSSVPNAVLIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL
Sbjct 781 GGAGGFGADTGGNSSSVPNAVLIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL 837
>gi|344218100|gb|AEM98730.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=837
Score = 1310 bits (3391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 827/837 (99%), Positives = 829/837 (99%), Gaps = 0/837 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLESSI+AANAAAAANTTALLAAGADEVSTAVAALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSISAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
Query 121 GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLIGNGGAGGAGGRASTGTG 180
GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLIGNGGAGGAGGRASTGTG
Sbjct 121 GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLIGNGGAGGAGGRASTGTG 180
Query 181 GAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGT 240
GAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGT
Sbjct 181 GAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGT 240
Query 241 GGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGN 300
GGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGN
Sbjct 241 GGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGN 300
Query 301 GGAGGDAGMLSLGAAGGAGGSGGSNPDGGGGAGGIGGDGGTLFGSGGAGGVCGLGFDAGG 360
GGAGGDAGMLSLGAAGGAGGSGGS+PDGGGGAGGIGGDGGTLFGSGGAGGV GLGFDAGG
Sbjct 301 GGAGGDAGMLSLGAAGGAGGSGGSSPDGGGGAGGIGGDGGTLFGSGGAGGVGGLGFDAGG 360
Query 361 AGGAGGKAGLLIGAGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAA 420
AGGAGGKAGLL GAGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAA
Sbjct 361 AGGAGGKAGLLSGAGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAA 420
Query 421 GGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILN 480
GGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILN
Sbjct 421 GGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILN 480
Query 481 AINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAG 540
AINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAG
Sbjct 481 AINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAG 540
Query 541 GILSGIGGTGGSGGIGTTGQGGTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGL 600
GILSGIGGTGGSGGIGTTGQGGTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGL
Sbjct 541 GILSGIGGTGGSGGIGTTGQGGTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGL 600
Query 601 FLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGGAGGFGANGGTGGNGLLFGAG 660
FLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGGAGGFGANGGTGGNGLLFGAG
Sbjct 601 FLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGGAGGFGANGGTGGNGLLFGAG 660
Query 661 GTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGG 720
GTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGG
Sbjct 661 GTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGG 720
Query 721 SGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFGNGGD 780
SGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFGNGGD
Sbjct 721 SGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFGNGGD 780
Query 781 GGAGGFGADTGGNSSSVPNAVLIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL 837
GGAGGFGA TGGN NAVLIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL
Sbjct 781 GGAGGFGAGTGGNGGVGGNAVLIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL 837
>gi|148821477|ref|YP_001286231.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148720004|gb|ABR04629.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
Length=837
Score = 1310 bits (3389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 827/837 (99%), Positives = 828/837 (99%), Gaps = 0/837 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
Query 121 GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLIGNGGAGGAGGRASTGTG 180
GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLIGNGGAGGAGGRASTGTG
Sbjct 121 GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLIGNGGAGGAGGRASTGTG 180
Query 181 GAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGT 240
AGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGT
Sbjct 181 SAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGT 240
Query 241 GGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGN 300
GGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGN
Sbjct 241 GGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGN 300
Query 301 GGAGGDAGMLSLGAAGGAGGSGGSNPDGGGGAGGIGGDGGTLFGSGGAGGVCGLGFDAGG 360
GGAGGDAGMLSLGAAGGAGGSGGS+PDGGGGAGGIGGDGGTLFGSGGAGGV GLGFDAGG
Sbjct 301 GGAGGDAGMLSLGAAGGAGGSGGSSPDGGGGAGGIGGDGGTLFGSGGAGGVGGLGFDAGG 360
Query 361 AGGAGGKAGLLIGAGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAA 420
AGGAGGKAGLL GAGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAA
Sbjct 361 AGGAGGKAGLLSGAGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAA 420
Query 421 GGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILN 480
GGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILN
Sbjct 421 GGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILN 480
Query 481 AINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAG 540
AINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAG
Sbjct 481 AINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAG 540
Query 541 GILSGIGGTGGSGGIGTTGQGGTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGL 600
GILSGIGGTGGSGGIGTTGQGGTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGL
Sbjct 541 GILSGIGGTGGSGGIGTTGQGGTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGL 600
Query 601 FLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGGAGGFGANGGTGGNGLLFGAG 660
FLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGGAGGFGANGGTGGNGLLFGAG
Sbjct 601 FLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGGAGGFGANGGTGGNGLLFGAG 660
Query 661 GTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGG 720
GTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGG
Sbjct 661 GTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGG 720
Query 721 SGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFGNGGD 780
SGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFGNGGD
Sbjct 721 SGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFGNGGD 780
Query 781 GGAGGFGADTGGNSSSVPNAVLIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL 837
GGAGGFGA TGGN NAVLIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL
Sbjct 781 GGAGGFGAGTGGNGGVGGNAVLIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL 837
>gi|253797206|ref|YP_003030207.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|289552535|ref|ZP_06441745.1| predicted protein [Mycobacterium tuberculosis KZN 605]
gi|253318709|gb|ACT23312.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|289437167|gb|EFD19660.1| predicted protein [Mycobacterium tuberculosis KZN 605]
gi|328456994|gb|AEB02417.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=844
Score = 1309 bits (3388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 827/837 (99%), Positives = 829/837 (99%), Gaps = 0/837 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLESSI+AANAAAAANTTALLAAGADEVSTAVAALFGAHGQ
Sbjct 8 MSFVIAAPEVIAAAATDLASLESSISAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 67
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN
Sbjct 68 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 127
Query 121 GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLIGNGGAGGAGGRASTGTG 180
GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLIGNGGAGGAGGRASTGTG
Sbjct 128 GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLIGNGGAGGAGGRASTGTG 187
Query 181 GAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGT 240
GAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGT
Sbjct 188 GAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGT 247
Query 241 GGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGN 300
GGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGN
Sbjct 248 GGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGN 307
Query 301 GGAGGDAGMLSLGAAGGAGGSGGSNPDGGGGAGGIGGDGGTLFGSGGAGGVCGLGFDAGG 360
GGAGGDAGMLSLGAAGGAGGSGGS+PDGGGGAGGIGGDGGTLFGSGGAGGV GLGFDAGG
Sbjct 308 GGAGGDAGMLSLGAAGGAGGSGGSSPDGGGGAGGIGGDGGTLFGSGGAGGVGGLGFDAGG 367
Query 361 AGGAGGKAGLLIGAGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAA 420
AGGAGGKAGLL GAGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAA
Sbjct 368 AGGAGGKAGLLSGAGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAA 427
Query 421 GGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILN 480
GGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILN
Sbjct 428 GGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILN 487
Query 481 AINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAG 540
AINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAG
Sbjct 488 AINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAG 547
Query 541 GILSGIGGTGGSGGIGTTGQGGTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGL 600
GILSGIGGTGGSGGIGTTGQGGTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGL
Sbjct 548 GILSGIGGTGGSGGIGTTGQGGTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGL 607
Query 601 FLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGGAGGFGANGGTGGNGLLFGAG 660
FLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGGAGGFGANGGTGGNGLLFGAG
Sbjct 608 FLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGGAGGFGANGGTGGNGLLFGAG 667
Query 661 GTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGG 720
GTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGG
Sbjct 668 GTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGG 727
Query 721 SGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFGNGGD 780
SGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFGNGGD
Sbjct 728 SGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFGNGGD 787
Query 781 GGAGGFGADTGGNSSSVPNAVLIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL 837
GGAGGFGA TGGN NAVLIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL
Sbjct 788 GGAGGFGAGTGGNGGVGGNAVLIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL 844
>gi|339630354|ref|YP_004721996.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339329710|emb|CCC25353.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=837
Score = 1306 bits (3380), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 825/837 (99%), Positives = 827/837 (99%), Gaps = 0/837 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
Query 121 GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLIGNGGAGGAGGRASTGTG 180
GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLIGNGGAGGAGGRASTGTG
Sbjct 121 GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLIGNGGAGGAGGRASTGTG 180
Query 181 GAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGT 240
GAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGT
Sbjct 181 GAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGT 240
Query 241 GGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGN 300
GGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGN
Sbjct 241 GGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGN 300
Query 301 GGAGGDAGMLSLGAAGGAGGSGGSNPDGGGGAGGIGGDGGTLFGSGGAGGVCGLGFDAGG 360
GGAGGDAGMLSLGAAGGAGGSGGS+PDGGGGAGGIGGDGGTLFGSGGAGGV GLGFDAGG
Sbjct 301 GGAGGDAGMLSLGAAGGAGGSGGSSPDGGGGAGGIGGDGGTLFGSGGAGGVGGLGFDAGG 360
Query 361 AGGAGGKAGLLIGAGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAA 420
AGGAGGKAGLL GAGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAA
Sbjct 361 AGGAGGKAGLLSGAGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAA 420
Query 421 GGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILN 480
GGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILN
Sbjct 421 GGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILN 480
Query 481 AINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAG 540
AINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAG
Sbjct 481 AINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAG 540
Query 541 GILSGIGGTGGSGGIGTTGQGGTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGL 600
GILSGIGGTGGSGGIGTTGQGGTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGL
Sbjct 541 GILSGIGGTGGSGGIGTTGQGGTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGL 600
Query 601 FLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGGAGGFGANGGTGGNGLLFGAG 660
FLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGGAGGFGANGGTGGNGLLFGAG
Sbjct 601 FLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGGAGGFGANGGTGGNGLLFGAG 660
Query 661 GTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGG 720
GTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGG
Sbjct 661 GTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGG 720
Query 721 SGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFGNGGD 780
SGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFGNGGD
Sbjct 721 SGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFGNGGD 780
Query 781 GGAGGFGADTGGNSSSVPNAVLIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL 837
GGAGGFG GG + NAVLIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL
Sbjct 781 GGAGGFGTGAGGTGGTGGNAVLIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL 837
>gi|148660045|ref|YP_001281568.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148504197|gb|ABQ72006.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=837
Score = 1306 bits (3379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 825/837 (99%), Positives = 826/837 (99%), Gaps = 0/837 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
Query 121 GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLIGNGGAGGAGGRASTGTG 180
GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLIGNGGAGGAGGRASTGTG
Sbjct 121 GAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGLIGNGGAGGAGGRASTGTG 180
Query 181 GAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGT 240
GAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGT
Sbjct 181 GAGGAGGAAGMLFGAAGVGGPGGFAAAFGATGGAGGAGGNGGLFADGGVGGAGGATDAGT 240
Query 241 GGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGN 300
GGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGN
Sbjct 241 GGAGGSGGNGGLFGAGGTGGPGGFGIFGGGAGGDGGSGGLFGAGGTGGSGGTSIINVGGN 300
Query 301 GGAGGDAGMLSLGAAGGAGGSGGSNPDGGGGAGGIGGDGGTLFGSGGAGGVCGLGFDAGG 360
GGAGGDAGMLSLGAAGGAGGSGGS+PDGGGGAGGIGGDGGTLFGSGGAGGV GLGFDAGG
Sbjct 301 GGAGGDAGMLSLGAAGGAGGSGGSSPDGGGGAGGIGGDGGTLFGSGGAGGVGGLGFDAGG 360
Query 361 AGGAGGKAGLLIGAGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAA 420
AGGAGGKAGLL GAGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAA
Sbjct 361 AGGAGGKAGLLSGAGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAA 420
Query 421 GGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILN 480
GGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILN
Sbjct 421 GGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILN 480
Query 481 AINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAG 540
AINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAG
Sbjct 481 AINEPTQALTGRPLIGNGANGTPGTGADGGAGGWLFGNGGNGGHGATGADGGDGGSGGAG 540
Query 541 GILSGIGGTGGSGGIGTTGQGGTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGL 600
GILSGIGGTGGSGGIGTTGQGGTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGL
Sbjct 541 GILSGIGGTGGSGGIGTTGQGGTGGTGGAALLIGSGGTGGSGGFGLDTGGAGGRGGDAGL 600
Query 601 FLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGGAGGFGANGGTGGNGLLFGAG 660
FLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGGAGGFGANGGTGGNGLLFGAG
Sbjct 601 FLGAAGTGGQAALSQNFIGAGGTAGAGGTGGLFANGGAGGAGGFGANGGTGGNGLLFGAG 660
Query 661 GTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGG 720
GTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGG
Sbjct 661 GTGGAGTLGADGGAGGHGGLFGAGGTGGAGGSSGGTFGGNGGSGGNAGLLALGASGGAGG 720
Query 721 SGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFGNGGD 780
SGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFG GD
Sbjct 721 SGGSALNVGGTGGVGGNGGSGGSLFGFGGAGGTGGSSGIGSSGGTGGDGGTAGVFGKKGD 780
Query 781 GGAGGFGADTGGNSSSVPNAVLIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL 837
GGAGGFGA TGG NAVLIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL
Sbjct 781 GGAGGFGAGTGGYGGVGGNAVLIGNGGNGGNGGKAGGTPGAGGTSGLIIGENGLNGL 837
>gi|224988667|ref|YP_002643354.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|224771780|dbj|BAH24586.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length=834
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 132/136 (98%), Positives = 133/136 (98%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNG N
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGA+G GGWLI
Sbjct 121 GAPGTGADGAPGGWLI 136
>gi|121636194|ref|YP_976417.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121491841|emb|CAL70304.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|341600210|emb|CCC62880.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=834
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 132/136 (98%), Positives = 133/136 (98%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNG N
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGA+G GGWLI
Sbjct 121 GAPGTGADGAPGGWLI 136
>gi|31791458|ref|NP_853951.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31617043|emb|CAD93151.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=831
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 132/136 (98%), Positives = 133/136 (98%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNG N
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGA+G GGWLI
Sbjct 121 GAPGTGADGAPGGWLI 136
>gi|253797204|ref|YP_003030205.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|253318707|gb|ACT23310.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|328456991|gb|AEB02414.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=967
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/136 (96%), Positives = 131/136 (97%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ
Sbjct 36 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 95
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQF QALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNGTN
Sbjct 96 AYQALSAQAQAFHAQFTQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGTN 155
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGA+G GGWLI
Sbjct 156 GAPGTGADGAPGGWLI 171
>gi|121636192|ref|YP_976415.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224988665|ref|YP_002643352.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121491839|emb|CAL70302.1| PE-PGRS family protein [first part] [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|224771778|dbj|BAH24584.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600208|emb|CCC62878.1| PE-PGRS family protein [first part] [Mycobacterium bovis BCG
str. Moreau RDJ]
Length=916
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/136 (97%), Positives = 132/136 (98%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQF QALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNG N
Sbjct 61 AYQALSAQAQAFHAQFTQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGA+G GGWLI
Sbjct 121 GAPGTGADGAPGGWLI 136
>gi|31791456|ref|NP_853949.1| hypothetical protein Mb0285c [Mycobacterium bovis AF2122/97]
gi|31617041|emb|CAD93149.1| PE-PGRS FAMILY PROTEIN [FIRST PART] [Mycobacterium bovis AF2122/97]
Length=868
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/136 (97%), Positives = 132/136 (98%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQF QALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNG N
Sbjct 61 AYQALSAQAQAFHAQFTQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGA+G GGWLI
Sbjct 121 GAPGTGADGAPGGWLI 136
>gi|340625314|ref|YP_004743766.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340003504|emb|CCC42625.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=729
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 130/137 (95%), Positives = 131/137 (96%), Gaps = 0/137 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQF QALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNG N
Sbjct 61 AYQALSAQAQAFHAQFTQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLIG 137
GAPGTGA+G GGWLIG
Sbjct 121 GAPGTGADGAPGGWLIG 137
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/46 (70%), Positives = 35/46 (77%), Gaps = 0/46 (0%)
Query 455 GQLLGRDGFNAPASTPLHTLQQQILNAINEPTQALTGRPLIGNGAN 500
QL+G DG NAP S +HTLQQ LN +NEP Q LTGRPLIGNGAN
Sbjct 407 RQLIGLDGSNAPVSNSVHTLQQAALNVVNEPFQTLTGRPLIGNGAN 452
>gi|340625315|ref|YP_004743767.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340003505|emb|CCC42626.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=899
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 132/136 (98%), Positives = 134/136 (99%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSI+AANAAAAANTTALLAAGADEVSTA+AALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALLAAGADEVSTAIAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNG N
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 121 GAPGTGANGGDGGWLI 136
>gi|339293336|gb|AEJ45447.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079]
Length=957
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 132/136 (98%), Positives = 132/136 (98%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQF QALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNG N
Sbjct 61 AYQALSAQAQAFHAQFTQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 121 GAPGTGANGGDGGWLI 136
>gi|340625316|ref|YP_004743768.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340003506|emb|CCC42627.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=836
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 132/136 (98%), Positives = 134/136 (99%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSI+AANAAAAANTTALLAAGADEVSTA+AALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALLAAGADEVSTAIAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNG N
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 121 GAPGTGANGGDGGWLI 136
>gi|328456993|gb|AEB02416.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
Length=779
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 129/136 (95%), Positives = 132/136 (98%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSI+AANAAAAANTTAL+AAGADEVSTA+AALFGAHGQ
Sbjct 8 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 67
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNG N
Sbjct 68 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 127
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 128 GAPGTGANGGDGGWLI 143
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/38 (74%), Positives = 31/38 (82%), Gaps = 0/38 (0%)
Query 478 ILNAINEPTQALTGRPLIGNGANGTPGTGADGGAGGWL 515
+L+ INE A TGRPLIGNGANG PGTGA+GG GGWL
Sbjct 105 LLDPINEFFLANTGRPLIGNGANGAPGTGANGGDGGWL 142
>gi|253797205|ref|YP_003030206.1| hypothetical protein TBMG_00283 [Mycobacterium tuberculosis KZN
1435]
gi|253318708|gb|ACT23311.1| predicted protein [Mycobacterium tuberculosis KZN 1435]
Length=919
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/136 (95%), Positives = 132/136 (98%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSI+AANAAAAANTTAL+AAGADEVSTA+AALFGAHGQ
Sbjct 8 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 67
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNG N
Sbjct 68 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 127
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 128 GAPGTGANGGDGGWLI 143
>gi|148660044|ref|YP_001281567.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148504196|gb|ABQ72005.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=957
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/136 (95%), Positives = 132/136 (98%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSI+AANAAAAANTTAL+AAGADEVSTA+AALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNG N
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 121 GAPGTGANGGDGGWLI 136
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/38 (74%), Positives = 31/38 (82%), Gaps = 0/38 (0%)
Query 478 ILNAINEPTQALTGRPLIGNGANGTPGTGADGGAGGWL 515
+L+ INE A TGRPLIGNGANG PGTGA+GG GGWL
Sbjct 98 LLDPINEFFLANTGRPLIGNGANGAPGTGANGGDGGWL 135
>gi|31791457|ref|NP_853950.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31617042|emb|CAD93150.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=877
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/136 (95%), Positives = 132/136 (98%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSI+AANAAAAANTTAL+AAGADEVSTA+AALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNG N
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 121 GAPGTGANGGDGGWLI 136
>gi|148821476|ref|YP_001286230.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148720003|gb|ABR04628.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|344218099|gb|AEM98729.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=906
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/136 (95%), Positives = 132/136 (98%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSI+AANAAAAANTTAL+AAGADEVSTA+AALFGAHGQ
Sbjct 8 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 67
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNG N
Sbjct 68 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 127
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 128 GAPGTGANGGDGGWLI 143
>gi|121636193|ref|YP_976416.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224988666|ref|YP_002643353.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121491840|emb|CAL70303.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224771779|dbj|BAH24585.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600209|emb|CCC62879.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=899
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/136 (95%), Positives = 132/136 (98%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSI+AANAAAAANTTAL+AAGADEVSTA+AALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNG N
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 121 GAPGTGANGGDGGWLI 136
>gi|57116712|ref|YP_177707.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|7388393|sp|P56877.1|PG03_MYCTU RecName: Full=Uncharacterized PE-PGRS family protein PE_PGRS3;
Flags: Precursor
gi|41352752|emb|CAE55262.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=957
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/136 (95%), Positives = 132/136 (98%), Gaps = 0/136 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPEVIAAAATDLASL SSI+AANAAAAANTTAL+AAGADEVSTA+AALFGAHGQ
Sbjct 1 MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAA SPLL PINEFFLANTGRPLIGNG N
Sbjct 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLI 136
GAPGTGANGGDGGWLI
Sbjct 121 GAPGTGANGGDGGWLI 136
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/38 (74%), Positives = 31/38 (82%), Gaps = 0/38 (0%)
Query 478 ILNAINEPTQALTGRPLIGNGANGTPGTGADGGAGGWL 515
+L+ INE A TGRPLIGNGANG PGTGA+GG GGWL
Sbjct 98 LLDPINEFFLANTGRPLIGNGANGAPGTGANGGDGGWL 135
>gi|340626769|ref|YP_004745221.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004959|emb|CCC44107.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=914
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/138 (80%), Positives = 120/138 (87%), Gaps = 0/138 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIA PE IAAAATDLA+L S+IA ANAAAAANTT+LLAAGADE+S A+AALFGAHG+
Sbjct 1 MSFVIAVPETIAAAATDLANLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQA SA+A AFH +FVQALT+GGGAYAAAEAAA +PLL IN LA TGRPLI NG N
Sbjct 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIANGAN 120
Query 121 GAPGTGANGGDGGWLIGN 138
GAPGTGANGGD GWLIGN
Sbjct 121 GAPGTGANGGDAGWLIGN 138
>gi|15839660|ref|NP_334697.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13879780|gb|AAK44511.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=905
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/90 (95%), Positives = 87/90 (97%), Gaps = 0/90 (0%)
Query 47 VSTAVAALFGAHGQAYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFF 106
+STA+AALFGAHGQAYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAA SPLL PINEFF
Sbjct 1 MSTAIAALFGAHGQAYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPLLDPINEFF 60
Query 107 LANTGRPLIGNGTNGAPGTGANGGDGGWLI 136
LANTGRPLIGNG NGAPGTGANGGDGGWLI
Sbjct 61 LANTGRPLIGNGANGAPGTGANGGDGGWLI 90
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/38 (74%), Positives = 31/38 (82%), Gaps = 0/38 (0%)
Query 478 ILNAINEPTQALTGRPLIGNGANGTPGTGADGGAGGWL 515
+L+ INE A TGRPLIGNGANG PGTGA+GG GGWL
Sbjct 52 LLDPINEFFLANTGRPLIGNGANGAPGTGANGGDGGWL 89
>gi|183984370|ref|YP_001852661.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183177696|gb|ACC42806.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=910
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/132 (62%), Positives = 101/132 (77%), Gaps = 3/132 (2%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MS+VIA P+++A AA++LA + S+++ A AAAA TT +LAA DEVS A+AA+F AHGQ
Sbjct 1 MSYVIAVPDLVAGAASELAGVGSTLSTATTAAAAQTTGVLAAAGDEVSAAIAAVFSAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSP---LLAPINEFFLANTGRPLIGN 117
+YQ LSAQA+ FHAQFVQAL++G AY AEAA+ SP LLA IN + TGRPLIGN
Sbjct 61 SYQTLSAQAETFHAQFVQALSAGASAYTQAEAASASPLAGLLAAINAPVQSLTGRPLIGN 120
Query 118 GTNGAPGTGANG 129
G NG PGTGA+G
Sbjct 121 GANGTPGTGADG 132
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 51/131 (39%), Positives = 63/131 (49%), Gaps = 23/131 (17%)
Query 397 APGLVGNAGNGGNG-GASANGAGAAGGAGGSGVLIGNGGNGGSGGTGAPAGTAGAGGLGG 455
P LV A + G G++ + A A A +GVL G + A A A G
Sbjct 7 VPDLVAGAASELAGVGSTLSTATTAAAAQTTGVL----AAAGDEVSAAIAAVFSAHGQSY 62
Query 456 QLLG--RDGFNAPASTPL------HTLQQQ---------ILNAINEPTQALTGRPLIGNG 498
Q L + F+A L +T Q + +L AIN P Q+LTGRPLIGNG
Sbjct 63 QTLSAQAETFHAQFVQALSAGASAYT-QAEAASASPLAGLLAAINAPVQSLTGRPLIGNG 121
Query 499 ANGTPGTGADG 509
ANGTPGTGADG
Sbjct 122 ANGTPGTGADG 132
>gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178338|gb|ACC43448.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1451
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/129 (60%), Positives = 95/129 (74%), Gaps = 9/129 (6%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MS++IAAPE++ +AA DLA +ES+++AAN +AA TT +LAAGADEVS A+AALFGAH Q
Sbjct 1 MSYLIAAPELMQSAAADLAGIESALSAANVSAAVPTTQILAAGADEVSAAIAALFGAHAQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLAN------TGRPL 114
AYQAL + AFH +FVQAL SG +YA AEAA+ +PL A + L N GRPL
Sbjct 61 AYQALGSHVTAFHQEFVQALNSGAASYANAEAASIAPLQALYD---LVNAPTQALLGRPL 117
Query 115 IGNGTNGAP 123
IGNG NGAP
Sbjct 118 IGNGANGAP 126
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/28 (68%), Positives = 22/28 (79%), Gaps = 0/28 (0%)
Query 476 QQILNAINEPTQALTGRPLIGNGANGTP 503
Q + + +N PTQAL GRPLIGNGANG P
Sbjct 99 QALYDLVNAPTQALLGRPLIGNGANGAP 126
>gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183175442|gb|ACC40552.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1386
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/126 (54%), Positives = 79/126 (63%), Gaps = 15/126 (11%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFV APE++A AA+DL L S+I+AAN AAA +TT +LAAGADEVS +AALFG H
Sbjct 1 MSFVGVAPEMVAVAASDLERLGSTISAANVAAAGSTTTILAAGADEVSAVIAALFGTHAL 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLL-----------APINEFFLAN 109
YQA+S Q FH QFVQ LT+G GAY+AAE PL AP F
Sbjct 61 EYQAISTQLSVFHEQFVQTLTNGVGAYSAAELVNVLPLQNVEQDLLNLVNAPTQALF--- 117
Query 110 TGRPLI 115
GRPLI
Sbjct 118 -GRPLI 122
>gi|183985176|ref|YP_001853467.1| PE-PGRS family protein, PE_PGRS9_2 [Mycobacterium marinum M]
gi|183178502|gb|ACC43612.1| PE-PGRS family protein, PE_PGRS9_2 [Mycobacterium marinum M]
Length=846
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/138 (53%), Positives = 92/138 (67%), Gaps = 13/138 (9%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MS+V+A PE+I A AAA+ AAA+ TT ++AA DEVS A+A + +HGQ
Sbjct 1 MSYVMAVPEIIEA------------AAADLAAASQTTQIVAAAEDEVSAAIATVLSSHGQ 48
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
YQ LSA+A FH + QAL++G GAY+ AEA++ LLA +NE A TGRPLIGNG N
Sbjct 49 GYQVLSARALEFHTRLAQALSAGAGAYSGAEASSAG-LLAAVNEPIAALTGRPLIGNGAN 107
Query 121 GAPGTGANGGDGGWLIGN 138
G PG G +G GGWLIGN
Sbjct 108 GTPGLGTDGAPGGWLIGN 125
>gi|253799200|ref|YP_003032201.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|253320703|gb|ACT25306.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|328458955|gb|AEB04378.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=950
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 111/138 (81%), Positives = 120/138 (87%), Gaps = 0/138 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIA PE IAAAATDLA L S+IA ANAAAAANTT+LLAAGADE+S A+AALFGAHG+
Sbjct 37 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 96
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQA SA+A AFH +FVQALT+GGGAYAAAEAAA +PLL IN LA TGRPLIGNG N
Sbjct 97 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 156
Query 121 GAPGTGANGGDGGWLIGN 138
GAPGTGANGGD GWLIGN
Sbjct 157 GAPGTGANGGDAGWLIGN 174
>gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174556|gb|ACC39666.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=963
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/121 (57%), Positives = 86/121 (72%), Gaps = 3/121 (2%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
M+FV+ APE++ AAA+DLA++ S+I AN A AA T LLAAG DEVS A+A+LF H
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSP---LLAPINEFFLANTGRPLIGN 117
YQ+L A+ AFH QFV ALT+GGG Y++AEAAA +P LL +N A GRPLIG+
Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLNVVNAPTQALLGRPLIGD 120
Query 118 G 118
G
Sbjct 121 G 121
Score = 37.7 bits (86), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/34 (56%), Positives = 23/34 (68%), Gaps = 4/34 (11%)
Query 467 ASTPLHTLQQQILNAINEPTQALTGRPLIGNGAN 500
A+TPL L + N PTQAL GRPLIG+GA+
Sbjct 94 AATPLQDLLNVV----NAPTQALLGRPLIGDGAD 123
>gi|297634316|ref|ZP_06952096.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=657
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 111/138 (81%), Positives = 120/138 (87%), Gaps = 0/138 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIA PE IAAAATDLA L S+IA ANAAAAANTT+LLAAGADE+S A+AALFGAHG+
Sbjct 37 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 96
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQA SA+A AFH +FVQALT+GGGAYAAAEAAA +PLL IN LA TGRPLIGNG N
Sbjct 97 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 156
Query 121 GAPGTGANGGDGGWLIGN 138
GAPGTGANGGD GWLIGN
Sbjct 157 GAPGTGANGGDAGWLIGN 174
>gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174555|gb|ACC39665.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=946
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/124 (55%), Positives = 86/124 (70%), Gaps = 9/124 (7%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
M+FV+ APE++ AAA+DLA++ S+I AN A AA T LLAAG DEVS A+A+LF H
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLAN------TGRPL 114
YQ+L A+ AFH QFV ALT+GGG Y++AEAAA +PL +N + N GRPL
Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLN---VVNAPTQALLGRPL 117
Query 115 IGNG 118
IG+G
Sbjct 118 IGDG 121
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/34 (56%), Positives = 23/34 (68%), Gaps = 4/34 (11%)
Query 467 ASTPLHTLQQQILNAINEPTQALTGRPLIGNGAN 500
A+TPL L + N PTQAL GRPLIG+GA+
Sbjct 94 AATPLQDLLNVV----NAPTQALLGRPLIGDGAD 123
>gi|344219580|gb|AEN00211.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=914
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/138 (81%), Positives = 120/138 (87%), Gaps = 0/138 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIA PE IAAAATDLA L S+IA ANAAAAANTT+LLAAGADE+S A+AALFGAHG+
Sbjct 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQA SA+A AFH +FVQALT+GGGAYAAAEAAA +PLL IN LA TGRPLIGNG N
Sbjct 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLIGN 138
GAPGTGANGGD GWLIGN
Sbjct 121 GAPGTGANGGDAGWLIGN 138
>gi|148822970|ref|YP_001287724.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148721497|gb|ABR06122.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
Length=911
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/138 (81%), Positives = 120/138 (87%), Gaps = 0/138 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIA PE IAAAATDLA L S+IA ANAAAAANTT+LLAAGADE+S A+AALFGAHG+
Sbjct 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQA SA+A AFH +FVQALT+GGGAYAAAEAAA +PLL IN LA TGRPLIGNG N
Sbjct 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLIGN 138
GAPGTGANGGD GWLIGN
Sbjct 121 GAPGTGANGGDAGWLIGN 138
>gi|289554468|ref|ZP_06443678.1| predicted protein [Mycobacterium tuberculosis KZN 605]
gi|289439100|gb|EFD21593.1| predicted protein [Mycobacterium tuberculosis KZN 605]
Length=954
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/138 (81%), Positives = 120/138 (87%), Gaps = 0/138 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIA PE IAAAATDLA L S+IA ANAAAAANTT+LLAAGADE+S A+AALFGAHG+
Sbjct 41 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 100
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQA SA+A AFH +FVQALT+GGGAYAAAEAAA +PLL IN LA TGRPLIGNG N
Sbjct 101 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 160
Query 121 GAPGTGANGGDGGWLIGN 138
GAPGTGANGGD GWLIGN
Sbjct 161 GAPGTGANGGDAGWLIGN 178
>gi|183984369|ref|YP_001852660.1| PE-PGRS family protein, PE_PGRS9_3 [Mycobacterium marinum M]
gi|183177695|gb|ACC42805.1| PE-PGRS family protein, PE_PGRS9_3 [Mycobacterium marinum M]
Length=910
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/143 (61%), Positives = 100/143 (70%), Gaps = 11/143 (7%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFV PE +AAAA+DL + S + ANA AA TT +LAAG DEVS A+AALF HGQ
Sbjct 1 MSFVNVTPEAVAAAASDLTGIGSVLGEANAVAARATTTVLAAGGDEVSAAIAALFSFHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSP---LL----APINEFFLANTGRP 113
+YQ L AQA+AFHAQF Q + +G G YA+AEAA +P LL AP+ TGRP
Sbjct 61 SYQTLGAQAEAFHAQFAQLMANGAGTYASAEAANAAPFQGLLGAVNAPVQTL----TGRP 116
Query 114 LIGNGTNGAPGTGANGGDGGWLI 136
LIGNG NGAPGTGANGG GGWLI
Sbjct 117 LIGNGANGAPGTGANGGAGGWLI 139
>gi|57116905|ref|YP_177831.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|61249984|sp|P0A686.1|WA22_MYCTU RecName: Full=WAG22 antigen; Flags: Precursor
gi|61249985|sp|P0A687.1|WA22_MYCBO RecName: Full=WAG22 antigen; Flags: Precursor
gi|38684054|emb|CAE55417.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=914
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/138 (81%), Positives = 120/138 (87%), Gaps = 0/138 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIA PE IAAAATDLA L S+IA ANAAAAANTT+LLAAGADE+S A+AALFGAHG+
Sbjct 1 MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLANTGRPLIGNGTN 120
AYQA SA+A AFH +FVQALT+GGGAYAAAEAAA +PLL IN LA TGRPLIGNG N
Sbjct 61 AYQAASAEAAAFHGRFVQALTTGGGAYAAAEAAAVTPLLNSINAPVLAATGRPLIGNGAN 120
Query 121 GAPGTGANGGDGGWLIGN 138
GAPGTGANGGD GWLIGN
Sbjct 121 GAPGTGANGGDAGWLIGN 138
>gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
gi|289437463|gb|EFD19956.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
Length=998
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/124 (54%), Positives = 78/124 (63%), Gaps = 2/124 (1%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIA PE++ AATDLA + S A AAA +L A ADEVS AVAALFG H Q
Sbjct 1 MSFVIATPEMLTTAATDLAKI-GSTITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAA-ATSPLLAPINEFFLANTGRPLIGNGT 119
YQ +SAQ FH +FVQ L++ +Y AAEA LLA +N A GRPLIGNG
Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119
Query 120 NGAP 123
+G+P
Sbjct 120 DGSP 123
>gi|183983306|ref|YP_001851597.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183176632|gb|ACC41742.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=965
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/124 (55%), Positives = 85/124 (69%), Gaps = 9/124 (7%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
M+FV+ APE++ AAA+DLA++ S+I AN A AA T LLAAG DEVS A+A+LF H
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPLLAPINEFFLAN------TGRPL 114
YQ L A+ AFH QFV ALT+GGG Y++AEAAA +PL +N + N GRPL
Sbjct 61 DYQNLGARMTAFHDQFVAALTAGGGLYSSAEAAAATPLQDLLN---VVNAPTQALLGRPL 117
Query 115 IGNG 118
IG+G
Sbjct 118 IGDG 121
>gi|183982951|ref|YP_001851242.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183176277|gb|ACC41387.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=866
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/126 (60%), Positives = 87/126 (70%), Gaps = 3/126 (2%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
M+ + A PE++ AAT+L + SS+ ANA A TT ++AA DEVS A+AALF HGQ
Sbjct 1 MTALTAVPEIVVHAATELRDIGSSVNTANAMATTQTTTIVAAAQDEVSAAIAALFSVHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSP---LLAPINEFFLANTGRPLIGN 117
YQ LSAQA FH QFV+AL+S GGAYAAAEAA T P LL IN A TGRPLIGN
Sbjct 61 TYQQLSAQAITFHEQFVRALSSAGGAYAAAEAANTGPLQQLLEAINSPVQALTGRPLIGN 120
Query 118 GTNGAP 123
G NGAP
Sbjct 121 GANGAP 126
>gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|253319014|gb|ACT23617.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|328457295|gb|AEB02718.1| hypothetical protein TBSG_00589 [Mycobacterium tuberculosis KZN
4207]
gi|344218399|gb|AEM99029.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1303
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/124 (54%), Positives = 79/124 (64%), Gaps = 2/124 (1%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIA PE++ AATDLA + S+ A AAA +L A ADEVS AVAALFG H Q
Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAA-ATSPLLAPINEFFLANTGRPLIGNGT 119
YQ +SAQ FH +FVQ L++ +Y AAEA LLA +N A GRPLIGNG
Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119
Query 120 NGAP 123
+G+P
Sbjct 120 DGSP 123
>gi|183985312|ref|YP_001853603.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178638|gb|ACC43748.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=846
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/130 (57%), Positives = 92/130 (71%), Gaps = 8/130 (6%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAA-GADEVSTAVAALFGAHG 59
MS+V A+PEV+ AAA +++++ SS+ ANA+AAA TTALL+A GADEVS AV A+FG H
Sbjct 1 MSYVFASPEVLNAAAAEVSTIGSSLQTANASAAAPTTALLSALGADEVSAAVTAMFGNHA 60
Query 60 QAYQALSAQAQAFHAQFVQALTSGGGAYAAAEA--AAT-----SPLLAPINEFFLANTGR 112
QAYQA+S QA FH +FV ALT+G AY++AEA AAT LL +N A GR
Sbjct 61 QAYQAVSTQAAEFHDRFVAALTAGADAYSSAEASTAATLQSLPQDLLNVVNAPTQALLGR 120
Query 113 PLIGNGTNGA 122
LIGNG NGA
Sbjct 121 ALIGNGANGA 130
>gi|340628625|ref|YP_004747077.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340006815|emb|CCC46004.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=901
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/139 (72%), Positives = 114/139 (83%), Gaps = 4/139 (2%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MS+VIAAPE + AAATDLA+L S+I AANAAAA +TTALLAAGADEVS A+AALFG HGQ
Sbjct 101 MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLAAGADEVSAAIAALFGMHGQ 160
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPL---LAPINEFFLANTGRPLIGN 117
YQALSA+A AFH +FVQAL +GGGAYAAAEAA+ SPL L +N A GRPLIGN
Sbjct 161 TYQALSARAAAFHERFVQALATGGGAYAAAEAASASPLQGALDLLNAPTQALLGRPLIGN 220
Query 118 GTNGAPGTGANGGDGGWLI 136
G NGAPG+GANGGD GW++
Sbjct 221 GANGAPGSGANGGD-GWIL 238
>gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224989855|ref|YP_002644542.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121493027|emb|CAL71498.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224772968|dbj|BAH25774.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601399|emb|CCC64072.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=1399
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/122 (53%), Positives = 82/122 (68%), Gaps = 7/122 (5%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MS VI APE +AAAA D+A + SSI AN+AAA +TT++LAAGADEVS A+A LFG+H +
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPL-------LAPINEFFLANTGRP 113
YQA+S Q AFH +F Q L++ G+Y +AEA +PL L +N A GRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 114 LI 115
LI
Sbjct 121 LI 122
>gi|340626105|ref|YP_004744557.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004295|emb|CCC43436.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=856
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/78 (75%), Positives = 66/78 (85%), Gaps = 0/78 (0%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFVIAAPE + A A+DLA + S++A ANAA A TT LLAAGADEVS+A+AALFGAHGQ
Sbjct 1 MSFVIAAPEALVAVASDLAGIGSALAEANAAVLAPTTGLLAAGADEVSSAIAALFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQ 78
AYQ +SAQA AFHAQFVQ
Sbjct 61 AYQTVSAQASAFHAQFVQ 78
>gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31618234|emb|CAD96152.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=1408
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/122 (53%), Positives = 82/122 (68%), Gaps = 7/122 (5%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MS VI APE +AAAA D+A + SSI AN+AAA +TT++LAAGADEVS A+A LFG+H +
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPL-------LAPINEFFLANTGRP 113
YQA+S Q AFH +F Q L++ G+Y +AEA +PL L +N A GRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 114 LI 115
LI
Sbjct 121 LI 122
>gi|57116821|ref|YP_177783.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148660872|ref|YP_001282395.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|7446016|pir||E70895 hypothetical glycine-rich protein Rv1087 - Mycobacterium tuberculosis
(strain H37RV)
gi|41353643|emb|CAE55354.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|148505024|gb|ABQ72833.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|339294083|gb|AEJ46194.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079]
Length=767
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/128 (63%), Positives = 95/128 (75%), Gaps = 9/128 (7%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFV+ APEV+AAAA+DLA + S++A ANAAA A TTA+LAAGADEVS A+A+LFGAHGQ
Sbjct 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGA--------YAAAEAAATSPLLAPINEFFLANTGR 112
AYQA+SAQ AFHAQF+QALT GGA +AA++ LLA IN F GR
Sbjct 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQD-LLAAINARFERIFGR 119
Query 113 PLIGNGTN 120
PLIG+G N
Sbjct 120 PLIGDGAN 127
>gi|340626099|ref|YP_004744551.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004289|emb|CCC43430.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=825
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/128 (63%), Positives = 95/128 (75%), Gaps = 9/128 (7%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MSFV+ APEV+AAAA+DLA + S++A ANAAA A TTA+LAAGADEVS A+A+LFGAHGQ
Sbjct 1 MSFVVVAPEVLAAAASDLAGIGSTLAQANAAALAPTTAVLAAGADEVSAAIASLFGAHGQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGA--------YAAAEAAATSPLLAPINEFFLANTGR 112
AYQA+SAQ AFHAQF+QALT GGA +AA++ LLA IN F GR
Sbjct 61 AYQAVSAQMSAFHAQFMQALTGAGGAYAAAEAVNVSAAQSVEQD-LLAAINMRFERIFGR 119
Query 113 PLIGNGTN 120
PLIG+G N
Sbjct 120 PLIGDGAN 127
>gi|183985330|ref|YP_001853621.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178656|gb|ACC43766.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=2001
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/130 (55%), Positives = 89/130 (69%), Gaps = 7/130 (5%)
Query 1 MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGAHGQ 60
MS+VIA P+++AAAA+DL ++ S++ AAN+AA A TT LLAA DEVSTA+A+LF A Q
Sbjct 1 MSYVIATPDMLAAAASDLTNIGSTLGAANSAALARTTGLLAAAEDEVSTAIASLFSASAQ 60
Query 61 AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAATSPL-------LAPINEFFLANTGRP 113
YQ +S +A HA+FV +LT G AYAAAEA SPL LA IN A T RP
Sbjct 61 EYQMVSTRAAHLHAEFVHSLTRAGAAYAAAEAVNASPLQTLEQNVLAAINAPSQALTARP 120
Query 114 LIGNGTNGAP 123
L G+G +GAP
Sbjct 121 LFGDGADGAP 130
Lambda K H
0.308 0.141 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2043498433236
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40