BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0285

Length=102
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15839671|ref|NP_334708.1|  PE family protein [Mycobacterium tu...   184    3e-45
gi|118616921|ref|YP_905253.1|  PE family protein [Mycobacterium u...   131    3e-29
gi|15828365|ref|NP_302628.1|  PE-family protein [Mycobacterium le...   130    5e-29
gi|118467190|ref|YP_883991.1|  PE family protein [Mycobacterium a...   127    5e-28
gi|41409879|ref|NP_962715.1|  hypothetical protein MAP3781 [Mycob...   126    1e-27
gi|145220930|ref|YP_001131608.1|  PE domain-containing protein [M...   123    7e-27
gi|296167588|ref|ZP_06849913.1|  PE-family protein [Mycobacterium...   122    1e-26
gi|254818902|ref|ZP_05223903.1|  PE family protein [Mycobacterium...   122    1e-26
gi|118617769|ref|YP_906101.1|  PE family protein [Mycobacterium u...   121    4e-26
gi|118470806|ref|YP_885029.1|  PE family protein [Mycobacterium s...   117    6e-25
gi|254777309|ref|ZP_05218825.1|  hypothetical protein MaviaA2_219...   117    7e-25
gi|108797353|ref|YP_637550.1|  PE-like protein [Mycobacterium sp....   117    8e-25
gi|342859231|ref|ZP_08715885.1|  hypothetical protein MCOL_10143 ...   115    2e-24
gi|169627151|ref|YP_001700800.1|  PE family protein [Mycobacteriu...   113    1e-23
gi|240168499|ref|ZP_04747158.1|  PE family protein, PE5 [Mycobact...   111    3e-23
gi|240169093|ref|ZP_04747752.1|  hypothetical protein MkanA1_0725...   111    3e-23
gi|240173110|ref|ZP_04751768.1|  PE-family protein [Mycobacterium...   109    2e-22
gi|333988933|ref|YP_004521547.1|  PE family protein PE5 [Mycobact...   109    2e-22
gi|240173309|ref|ZP_04751967.1|  PE family protein [Mycobacterium...   108    3e-22
gi|15827194|ref|NP_301457.1|  PE-family protein [Mycobacterium le...   105    2e-21
gi|317506395|ref|ZP_07964203.1|  PE family protein [Segniliparus ...   103    6e-21
gi|120401439|ref|YP_951268.1|  PE domain-containing protein [Myco...   103    7e-21
gi|118619480|ref|YP_907812.1|  PE family protein [Mycobacterium u...   101    4e-20
gi|240171484|ref|ZP_04750143.1|  PE domain-containing protein [My...   100    8e-20
gi|340628015|ref|YP_004746467.1|  PE family protein [Mycobacteriu...   100    1e-19
gi|169627767|ref|YP_001701416.1|  PE family protein [Mycobacteriu...  99.8    1e-19
gi|323718348|gb|EGB27525.1|  PE family protein [Mycobacterium tub...  99.4    1e-19
gi|31794200|ref|NP_856693.1|  PE family protein [Mycobacterium bo...  98.2    4e-19
gi|336460186|gb|EGO39090.1|  PE family protein [Mycobacterium avi...  97.1    8e-19
gi|15842585|ref|NP_337622.1|  PE family protein [Mycobacterium tu...  96.7    1e-18
gi|254365653|ref|ZP_04981698.1|  PE family protein [Mycobacterium...  95.9    2e-18
gi|240170992|ref|ZP_04749651.1|  hypothetical protein MkanA1_1690...  95.9    2e-18
gi|306777325|ref|ZP_07415662.1|  putative PE family protein [Myco...  95.9    2e-18
gi|308372403|ref|ZP_07428546.2|  putative PE family protein [Myco...  94.7    4e-18
gi|167966626|ref|ZP_02548903.1|  PE family protein [Mycobacterium...  93.2    1e-17
gi|306804804|ref|ZP_07441472.1|  putative PE family protein [Myco...  92.8    1e-17
gi|41406220|ref|NP_959056.1|  hypothetical protein MAP0122 [Mycob...  90.5    7e-17
gi|342860175|ref|ZP_08716827.1|  PE family protein [Mycobacterium...  89.7    1e-16
gi|254773162|ref|ZP_05214678.1|  PE family protein [Mycobacterium...  89.4    2e-16
gi|183983962|ref|YP_001852253.1|  PE-PGRS family protein [Mycobac...  89.0    2e-16
gi|308380551|ref|ZP_07490320.2|  putative PE family protein [Myco...  87.8    5e-16
gi|308369801|ref|ZP_07419129.2|  PE family protein [Mycobacterium...  87.8    5e-16
gi|340626400|ref|YP_004744852.1|  PE family protein [Mycobacteriu...  87.4    6e-16
gi|15840844|ref|NP_335881.1|  PE family protein [Mycobacterium tu...  87.4    6e-16
gi|240168395|ref|ZP_04747054.1|  PE family protein [Mycobacterium...  86.7    1e-15
gi|240173532|ref|ZP_04752190.1|  PE family protein [Mycobacterium...  86.3    1e-15
gi|254364274|ref|ZP_04980320.1|  PE family protein [Mycobacterium...  86.3    1e-15
gi|183985227|ref|YP_001853518.1|  PE family protein, PE5_1 [Mycob...  85.9    2e-15
gi|212596236|gb|ACJ35562.1|  PE1 [Mycobacterium intracellulare AT...  77.8    5e-13
gi|254821558|ref|ZP_05226559.1|  PE family protein [Mycobacterium...  77.4    6e-13


>gi|15839671|ref|NP_334708.1| PE family protein [Mycobacterium tuberculosis CDC1551]
 gi|31791464|ref|NP_853957.1| PE family protein [Mycobacterium bovis AF2122/97]
 gi|57116715|ref|YP_177710.1| PE family protein [Mycobacterium tuberculosis H37Rv]
 81 more sequence titles
 Length=102

 Score =  184 bits (468),  Expect = 3e-45, Method: Compositional matrix adjust.
 Identities = 102/102 (100%), Positives = 102/102 (100%), Gaps = 0/102 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE
Sbjct  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG  102
            HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG
Sbjct  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG  102


>gi|118616921|ref|YP_905253.1| PE family protein [Mycobacterium ulcerans Agy99]
 gi|183980572|ref|YP_001848863.1| PE family protein, PE5 [Mycobacterium marinum M]
 gi|118569031|gb|ABL03782.1| PE family protein [Mycobacterium ulcerans Agy99]
 gi|183173898|gb|ACC39008.1| PE family protein, PE5 [Mycobacterium marinum M]
Length=102

 Score =  131 bits (330),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 89/101 (89%), Positives = 94/101 (94%), Gaps = 0/101 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            MTLRVVPEGLAAASAAVEALTARLAAAHASA+PVI+AVVP A DPVSLQTAAGFSAQG+E
Sbjct  1    MTLRVVPEGLAAASAAVEALTARLAAAHASASPVISAVVPAAVDPVSLQTAAGFSAQGIE  60

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVG  101
            HA V AEGVEELGRAG+GVGESG SYLAGDA AAATYG+ G
Sbjct  61   HAAVAAEGVEELGRAGLGVGESGVSYLAGDAVAAATYGIAG  101


>gi|15828365|ref|NP_302628.1| PE-family protein [Mycobacterium leprae TN]
 gi|221230842|ref|YP_002504258.1| PE-family protein [Mycobacterium leprae Br4923]
 gi|13093795|emb|CAC32065.1| PE-family protein [Mycobacterium leprae]
 gi|219933949|emb|CAR72633.1| PE-family protein [Mycobacterium leprae Br4923]
Length=102

 Score =  130 bits (328),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 73/100 (73%), Positives = 84/100 (84%), Gaps = 0/100 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           MTLRVVPE LAA S A++ALTARL AAHA+A P + AVVPPAADPVSLQTAAGFSA+G E
Sbjct  1   MTLRVVPEKLAATSEAMKALTARLEAAHAAAFPCLVAVVPPAADPVSLQTAAGFSARGQE  60

Query  61  HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVV  100
           HA+V A+GVEELGRAG+GVG+S   Y   DA AA+TYG+V
Sbjct  61  HALVAAQGVEELGRAGIGVGQSSTHYAISDALAASTYGIV  100


>gi|118467190|ref|YP_883991.1| PE family protein [Mycobacterium avium 104]
 gi|118168477|gb|ABK69374.1| pe family protein [Mycobacterium avium 104]
 gi|212595842|gb|ACJ35527.1| PE11 [Mycobacterium avium subsp. avium]
Length=102

 Score =  127 bits (319),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 87/101 (87%), Positives = 93/101 (93%), Gaps = 0/101 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            MTLRVVPEGLAA SAAVEALTARLAAAHA+AAP ITAVVPPAADPVSLQTA GFSAQG E
Sbjct  1    MTLRVVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAADPVSLQTALGFSAQGQE  60

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVG  101
            H+ V A+GVEELGRAGVGVGE+GASYLAGD AAAAT+G+ G
Sbjct  61   HSAVAAQGVEELGRAGVGVGEAGASYLAGDTAAAATFGIAG  101


>gi|41409879|ref|NP_962715.1| hypothetical protein MAP3781 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41398711|gb|AAS06331.1| hypothetical protein MAP_3781 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=102

 Score =  126 bits (317),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 86/101 (86%), Positives = 93/101 (93%), Gaps = 0/101 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            MTLRVVPEGLAA SAAVEALTARLAAAHA+AAP ITAVVPPAADPVSLQTA GFSAQG E
Sbjct  1    MTLRVVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAADPVSLQTALGFSAQGQE  60

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVG  101
            H+ V A+GVEELGRAGVGVG++GASYLAGD AAAAT+G+ G
Sbjct  61   HSAVAAQGVEELGRAGVGVGQAGASYLAGDTAAAATFGIAG  101


>gi|145220930|ref|YP_001131608.1| PE domain-containing protein [Mycobacterium gilvum PYR-GCK]
 gi|315442100|ref|YP_004074979.1| PE family protein [Mycobacterium sp. Spyr1]
 gi|145213416|gb|ABP42820.1| PE domain protein [Mycobacterium gilvum PYR-GCK]
 gi|315260403|gb|ADT97144.1| PE family protein [Mycobacterium sp. Spyr1]
Length=102

 Score =  123 bits (309),  Expect = 7e-27, Method: Compositional matrix adjust.
 Identities = 75/102 (74%), Positives = 87/102 (86%), Gaps = 0/102 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            MTLRVVPEGL AASAAVEALTAR+AAAHA+AAP++TAV+PPAAD VSLQTA G SA GVE
Sbjct  1    MTLRVVPEGLTAASAAVEALTARMAAAHAAAAPLVTAVLPPAADAVSLQTATGLSANGVE  60

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG  102
            H  + A GVEELGR+GVGVG+S ASY++GDA AA +Y +  G
Sbjct  61   HQSIAARGVEELGRSGVGVGDSAASYVSGDAMAATSYLIARG  102


>gi|296167588|ref|ZP_06849913.1| PE-family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897131|gb|EFG76742.1| PE-family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=102

 Score =  122 bits (307),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 86/101 (86%), Positives = 91/101 (91%), Gaps = 0/101 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            MTLRVVPEGLAA SAAVEALTARLAAAHA+AAP ITAVVPPA DPVS+QTA GFSAQG E
Sbjct  1    MTLRVVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAVDPVSVQTAVGFSAQGSE  60

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVG  101
            HA V A+GVEELGRAGVGVGE+GASYLAGD AAAAT+G  G
Sbjct  61   HAAVAAQGVEELGRAGVGVGEAGASYLAGDTAAAATFGFGG  101


>gi|254818902|ref|ZP_05223903.1| PE family protein [Mycobacterium intracellulare ATCC 13950]
 gi|212596327|gb|ACJ35569.1| PE11 [Mycobacterium intracellulare ATCC 13950]
Length=102

 Score =  122 bits (307),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 83/101 (83%), Positives = 91/101 (91%), Gaps = 0/101 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            MTLRVVPEGLAA SAAVEALTARLAAAHA+AAP ITAVVPPA DPVSLQTA GFSAQG E
Sbjct  1    MTLRVVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAVDPVSLQTAMGFSAQGQE  60

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVG  101
            H+ +  +GVEELGRAG+GVGE+GASYLAGD AAAAT+G+ G
Sbjct  61   HSAMAVQGVEELGRAGLGVGEAGASYLAGDTAAAATFGIAG  101


>gi|118617769|ref|YP_906101.1| PE family protein [Mycobacterium ulcerans Agy99]
 gi|183983006|ref|YP_001851297.1| PE family protein [Mycobacterium marinum M]
 gi|118569879|gb|ABL04630.1| PE family protein [Mycobacterium ulcerans Agy99]
 gi|183176332|gb|ACC41442.1| PE family protein [Mycobacterium marinum M]
Length=101

 Score =  121 bits (303),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 78/99 (79%), Positives = 86/99 (87%), Gaps = 0/99 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           M LRVVPEGL A SAAVEALTARLAAA+A+ AP+ITAVVPPAADPVSL+ A GFSA GVE
Sbjct  1   MVLRVVPEGLVATSAAVEALTARLAAANAALAPLITAVVPPAADPVSLEAAIGFSAHGVE  60

Query  61  HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGV  99
           H  VT EG+EELGR+GVGVGESG SY +GDAAAA TYG+
Sbjct  61  HVAVTTEGIEELGRSGVGVGESGLSYASGDAAAALTYGL  99


>gi|118470806|ref|YP_885029.1| PE family protein [Mycobacterium smegmatis str. MC2 155]
 gi|118172093|gb|ABK72989.1| pe family protein [Mycobacterium smegmatis str. MC2 155]
Length=103

 Score =  117 bits (293),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 75/97 (78%), Positives = 85/97 (88%), Gaps = 0/97 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           MTLRVVPEGL AAS+AVEALTARLAAAHA+AAP+I+ V+PPAAD VSLQTAAGFSA G +
Sbjct  1   MTLRVVPEGLTAASSAVEALTARLAAAHAAAAPMISTVLPPAADAVSLQTAAGFSANGAQ  60

Query  61  HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY  97
            + V A+GVEELGR+GVGVGESG SY  GDA AAA+Y
Sbjct  61  QSAVAAQGVEELGRSGVGVGESGVSYATGDAQAAASY  97


>gi|254777309|ref|ZP_05218825.1| hypothetical protein MaviaA2_21931 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=98

 Score =  117 bits (292),  Expect = 7e-25, Method: Compositional matrix adjust.
 Identities = 82/97 (85%), Positives = 89/97 (92%), Gaps = 0/97 (0%)

Query  5    VVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVEHAVV  64
            +VPEGLAA SAAVEALTARLAAAHA+AAP ITAVVPPAADPVSLQTA GFSAQG EH+ V
Sbjct  1    MVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAADPVSLQTALGFSAQGQEHSAV  60

Query  65   TAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVG  101
             A+GVEELGRAGVGVGE+GASYLAGD AAAAT+G+ G
Sbjct  61   AAQGVEELGRAGVGVGEAGASYLAGDTAAAATFGIAG  97


>gi|108797353|ref|YP_637550.1| PE-like protein [Mycobacterium sp. MCS]
 gi|119866438|ref|YP_936390.1| PE domain-containing protein [Mycobacterium sp. KMS]
 gi|126432975|ref|YP_001068666.1| PE domain-containing protein [Mycobacterium sp. JLS]
 gi|108767772|gb|ABG06494.1| PE-like protein [Mycobacterium sp. MCS]
 gi|119692527|gb|ABL89600.1| PE domain protein [Mycobacterium sp. KMS]
 gi|126232775|gb|ABN96175.1| PE domain protein [Mycobacterium sp. JLS]
Length=102

 Score =  117 bits (292),  Expect = 8e-25, Method: Compositional matrix adjust.
 Identities = 74/102 (73%), Positives = 84/102 (83%), Gaps = 0/102 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            MTLRVVPEGL AASAAVEALTARLA+AHA+AAP+I  V+PPAAD VSLQTAAG SA G  
Sbjct  1    MTLRVVPEGLTAASAAVEALTARLASAHAAAAPLIGTVLPPAADAVSLQTAAGLSANGGR  60

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG  102
            H  V A+GV+ELGR+GVGVG+SGASY AGDA  A+ Y +  G
Sbjct  61   HEAVAAQGVQELGRSGVGVGQSGASYAAGDAMNASAYMIARG  102


>gi|342859231|ref|ZP_08715885.1| hypothetical protein MCOL_10143 [Mycobacterium colombiense CECT 
3035]
 gi|342133472|gb|EGT86675.1| hypothetical protein MCOL_10143 [Mycobacterium colombiense CECT 
3035]
Length=98

 Score =  115 bits (288),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 80/97 (83%), Positives = 89/97 (92%), Gaps = 0/97 (0%)

Query  5    VVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVEHAVV  64
            +VPEGLAA SAAVEALTARLAAAHA+AAP ITAVVPPA DPVSLQTAAGFSAQG EH+ +
Sbjct  1    MVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAVDPVSLQTAAGFSAQGQEHSAM  60

Query  65   TAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVG  101
             A+GVEELGRAGVGVG++GASYLAGD AAAAT+G+ G
Sbjct  61   AAQGVEELGRAGVGVGQAGASYLAGDTAAAATFGIAG  97


>gi|169627151|ref|YP_001700800.1| PE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169629317|ref|YP_001702966.1| PE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169239118|emb|CAM60146.1| Probable PE family protein [Mycobacterium abscessus]
 gi|169241284|emb|CAM62312.1| Hypothetical PE family protein [Mycobacterium abscessus]
Length=102

 Score =  113 bits (282),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 76/102 (75%), Positives = 84/102 (83%), Gaps = 0/102 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            M L VVPEGL A SAAVEALTARLAAAHA+AAPVI AVVPPAADPVSL+TAAGFSA+G+E
Sbjct  1    MNLNVVPEGLTATSAAVEALTARLAAAHAAAAPVIGAVVPPAADPVSLETAAGFSARGIE  60

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG  102
            H+ V A+ VEELGRAG+GV ES ASY  GD  AAA Y +  G
Sbjct  61   HSGVAAQAVEELGRAGLGVSESAASYTTGDMQAAAAYMIARG  102


>gi|240168499|ref|ZP_04747158.1| PE family protein, PE5 [Mycobacterium kansasii ATCC 12478]
Length=104

 Score =  111 bits (278),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 87/102 (86%), Positives = 92/102 (91%), Gaps = 0/102 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            MTLRVVPEGLAAASAAVEALTARLAAA A+AAP+ITAVVPPAADPVSLQTAAGFS QGVE
Sbjct  1    MTLRVVPEGLAAASAAVEALTARLAAAQAAAAPLITAVVPPAADPVSLQTAAGFSGQGVE  60

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG  102
            HA + AEGVEELGR+GVGVGE+G SY  GDAAAAATY   GG
Sbjct  61   HAAIVAEGVEELGRSGVGVGEAGVSYAVGDAAAAATYLASGG  102


>gi|240169093|ref|ZP_04747752.1| hypothetical protein MkanA1_07254 [Mycobacterium kansasii ATCC 
12478]
Length=103

 Score =  111 bits (278),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 77/100 (77%), Positives = 82/100 (82%), Gaps = 0/100 (0%)

Query  3    LRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVEHA  62
            LRVVPEGLAAASAAVEALTARL AAHA AAP+ITAVVPPAADPVS+ TAAGFS QG  HA
Sbjct  2    LRVVPEGLAAASAAVEALTARLTAAHAGAAPLITAVVPPAADPVSVATAAGFSVQGDIHA  61

Query  63   VVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG  102
             V A GVEELGR+G  +GESG  Y AGDA AA  YG+ GG
Sbjct  62   TVAAGGVEELGRSGAALGESGIGYAAGDAVAACAYGISGG  101


>gi|240173110|ref|ZP_04751768.1| PE-family protein [Mycobacterium kansasii ATCC 12478]
Length=102

 Score =  109 bits (272),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 80/90 (89%), Positives = 82/90 (92%), Gaps = 0/90 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           MTLRVVPEGLAAASAAVEALTARLAAAHA+AAP I AVVPPA DPVSLQTAA FS QG E
Sbjct  1   MTLRVVPEGLAAASAAVEALTARLAAAHAAAAPSIVAVVPPAVDPVSLQTAAEFSVQGQE  60

Query  61  HAVVTAEGVEELGRAGVGVGESGASYLAGD  90
           HAVV  +GVEELGRAGVGVGESGASYLAGD
Sbjct  61  HAVVATQGVEELGRAGVGVGESGASYLAGD  90


>gi|333988933|ref|YP_004521547.1| PE family protein PE5 [Mycobacterium sp. JDM601]
 gi|333484901|gb|AEF34293.1| PE family protein PE5 [Mycobacterium sp. JDM601]
Length=103

 Score =  109 bits (272),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 81/97 (84%), Positives = 86/97 (89%), Gaps = 0/97 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           MTL VVPEGLAAASAAVEALTARLAAA A+AAP+ITAVVPPAADPVSLQTAAGFSAQG E
Sbjct  1   MTLNVVPEGLAAASAAVEALTARLAAAQAAAAPLITAVVPPAADPVSLQTAAGFSAQGTE  60

Query  61  HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY  97
           HA V A+G  ELGRAGVGVGESG +Y AGDAA A+ Y
Sbjct  61  HAAVAAQGATELGRAGVGVGESGVNYAAGDAAGASRY  97


>gi|240173309|ref|ZP_04751967.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=104

 Score =  108 bits (269),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 80/102 (79%), Positives = 86/102 (85%), Gaps = 0/102 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            MTL+VVPEGLAAAS AVEALTARLAAAHA+A P ITAVVPPAADPVS+QTAAGFS  G  
Sbjct  1    MTLQVVPEGLAAASGAVEALTARLAAAHAAALPAITAVVPPAADPVSIQTAAGFSTHGSA  60

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG  102
            HA V AEG+EELGR+G+GV ESG SY AGDAAAA TY   GG
Sbjct  61   HAAVVAEGIEELGRSGIGVAESGVSYAAGDAAAAVTYSASGG  102


>gi|15827194|ref|NP_301457.1| PE-family protein [Mycobacterium leprae TN]
 gi|221229672|ref|YP_002503088.1| PE-family protein [Mycobacterium leprae Br4923]
 gi|13092742|emb|CAC30046.1| PE-family protein [Mycobacterium leprae]
 gi|219932779|emb|CAR70631.1| PE-family protein [Mycobacterium leprae Br4923]
Length=102

 Score =  105 bits (262),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 55/97 (57%), Positives = 65/97 (68%), Gaps = 0/97 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           MTL V+PEGL  ASA +EALTA LA  HA AAP I  V+PP +  VS+Q   GF+  G +
Sbjct  1   MTLGVIPEGLEGASAVIEALTAHLATVHAEAAPFIMEVIPPGSGSVSVQNQVGFNVHGCQ  60

Query  61  HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY  97
           +  +TA G EELGR GVGV ESG SY   DA A A+Y
Sbjct  61  YVAMTAHGAEELGRWGVGVAESGVSYALRDAFAVASY  97


>gi|317506395|ref|ZP_07964203.1| PE family protein [Segniliparus rugosus ATCC BAA-974]
 gi|316255311|gb|EFV14573.1| PE family protein [Segniliparus rugosus ATCC BAA-974]
Length=102

 Score =  103 bits (258),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 70/98 (72%), Positives = 77/98 (79%), Gaps = 0/98 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           M L+VVPEGL AASA VEALTARLAAA A+AAPVI AVVPPAADPVSLQ AAGFSA+G  
Sbjct  1   MILKVVPEGLMAASAEVEALTARLAAAQAAAAPVIGAVVPPAADPVSLQAAAGFSARGSS  60

Query  61  HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYG  98
           H  V AE VEELGR+G+GV E+  SY  GD   AA +G
Sbjct  61  HTAVAAEAVEELGRSGLGVAETAESYAVGDLQGAAVFG  98


>gi|120401439|ref|YP_951268.1| PE domain-containing protein [Mycobacterium vanbaalenii PYR-1]
 gi|119954257|gb|ABM11262.1| PE domain protein [Mycobacterium vanbaalenii PYR-1]
Length=102

 Score =  103 bits (258),  Expect = 7e-21, Method: Compositional matrix adjust.
 Identities = 73/102 (72%), Positives = 84/102 (83%), Gaps = 0/102 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            MTLRVVPEGL AA AAVEALTAR+AAAHA+AAPV+TAV+PPAAD VSLQ A GFSA+  E
Sbjct  1    MTLRVVPEGLTAAGAAVEALTARMAAAHAAAAPVVTAVLPPAADVVSLQAATGFSARAAE  60

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG  102
            H  V A+GVEELGR+G+ VGES ASY  GDA AA++Y +  G
Sbjct  61   HQSVAAQGVEELGRSGIAVGESAASYAGGDAMAASSYLIARG  102


>gi|118619480|ref|YP_907812.1| PE family protein [Mycobacterium ulcerans Agy99]
 gi|118571590|gb|ABL06341.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=104

 Score =  101 bits (252),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 64/86 (75%), Positives = 74/86 (87%), Gaps = 0/86 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           + LRV+PEGLA ASAAV  LTARLAAAHA AAP ITAV+PPAADPVS++ AAGFSA GVE
Sbjct  2   VMLRVIPEGLAGASAAVAGLTARLAAAHAVAAPAITAVIPPAADPVSVRNAAGFSAVGVE  61

Query  61  HAVVTAEGVEELGRAGVGVGESGASY  86
           H+ +  EG+EELGR+GVGVGE+G SY
Sbjct  62  HSAMATEGIEELGRSGVGVGEAGISY  87


>gi|240171484|ref|ZP_04750143.1| PE domain-containing protein [Mycobacterium kansasii ATCC 12478]
Length=113

 Score =  100 bits (249),  Expect = 8e-20, Method: Compositional matrix adjust.
 Identities = 61/97 (63%), Positives = 73/97 (76%), Gaps = 0/97 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            +TL VVPEGL AASAA+EALT RLAAAHA+A P+IT V PPAADPVS+Q+A     +G  
Sbjct  12   VTLSVVPEGLIAASAAIEALTTRLAAAHAAAVPLITVVAPPAADPVSVQSAVEAGVRGSA  71

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY  97
            HA V A G+E+LGR+GV V ES  +Y  GDA AA +Y
Sbjct  72   HAAVAARGLEDLGRSGVAVAESATTYATGDAVAAVSY  108


>gi|340628015|ref|YP_004746467.1| PE family protein [Mycobacterium canettii CIPT 140010059]
 gi|340006205|emb|CCC45379.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=104

 Score =  100 bits (248),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 84/102 (83%), Positives = 87/102 (86%), Gaps = 0/102 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            MTLRVVPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G E
Sbjct  1    MTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG  102
            HA + AEGVEELGR+GV VGESG  Y AGDA AAATY V GG
Sbjct  61   HAAIAAEGVEELGRSGVAVGESGVGYAAGDAVAAATYLVSGG  102


>gi|169627767|ref|YP_001701416.1| PE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169239734|emb|CAM60762.1| PE family protein [Mycobacterium abscessus]
Length=102

 Score = 99.8 bits (247),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 66/97 (69%), Positives = 75/97 (78%), Gaps = 0/97 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           M+L VVPEGL AASAAVEALTARLAA +A+AAPVI AV+PPAADPVS+Q+AA FSA G+E
Sbjct  1   MSLNVVPEGLTAASAAVEALTARLAAVNAAAAPVIGAVMPPAADPVSMQSAALFSAHGLE  60

Query  61  HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY  97
                A    ELGR+GVG  E+ ASY  GD  AAATY
Sbjct  61  RTGAGARAAYELGRSGVGATEAAASYTVGDIQAAATY  97


>gi|323718348|gb|EGB27525.1| PE family protein [Mycobacterium tuberculosis CDC1551A]
Length=127

 Score = 99.4 bits (246),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 76/94 (81%), Positives = 80/94 (86%), Gaps = 0/94 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            +TLRVVPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G E
Sbjct  34   VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  93

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAA  94
            HA +  EGVEELGR+GV VGESG  Y AGDA AA
Sbjct  94   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAA  127


>gi|31794200|ref|NP_856693.1| PE family protein [Mycobacterium bovis AF2122/97]
 gi|57117050|ref|YP_177685.1| PE family protein [Mycobacterium tuberculosis H37Rv]
 gi|121638905|ref|YP_979129.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 19 more sequence titles
 Length=104

 Score = 98.2 bits (243),  Expect = 4e-19, Method: Compositional matrix adjust.
 Identities = 83/102 (82%), Positives = 86/102 (85%), Gaps = 0/102 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            MTLRVVPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G E
Sbjct  1    MTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  60

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG  102
            HA +  EGVEELGR+GV VGESG  Y AGDA AAATY V GG
Sbjct  61   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG  102


>gi|336460186|gb|EGO39090.1| PE family protein [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=80

 Score = 97.1 bits (240),  Expect = 8e-19, Method: Compositional matrix adjust.
 Identities = 71/80 (89%), Positives = 74/80 (93%), Gaps = 0/80 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           MTLRVVPEGLAA SAAVEALTARLAAAHA+AAP ITAVVPPAADPVSLQTA GFSAQG E
Sbjct  1   MTLRVVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAADPVSLQTALGFSAQGQE  60

Query  61  HAVVTAEGVEELGRAGVGVG  80
           H+ V A+GVEELGRAGVGVG
Sbjct  61  HSAVAAQGVEELGRAGVGVG  80


>gi|15842585|ref|NP_337622.1| PE family protein [Mycobacterium tuberculosis CDC1551]
 gi|148824213|ref|YP_001288967.1| PE family protein [Mycobacterium tuberculosis F11]
 gi|289553187|ref|ZP_06442397.1| PE family protein [Mycobacterium tuberculosis KZN 605]
 gi|13882898|gb|AAK47436.1| PE family protein [Mycobacterium tuberculosis CDC1551]
 gi|148722740|gb|ABR07365.1| PE family protein [Mycobacterium tuberculosis F11]
 gi|289437819|gb|EFD20312.1| PE family protein [Mycobacterium tuberculosis KZN 605]
 gi|328457658|gb|AEB03081.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
 gi|344220857|gb|AEN01488.1| PE family protein [Mycobacterium tuberculosis CTRI-2]
Length=137

 Score = 96.7 bits (239),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 82/102 (81%), Positives = 86/102 (85%), Gaps = 0/102 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            +TLRVVPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G E
Sbjct  34   VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  93

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG  102
            HA +  EGVEELGR+GV VGESG  Y AGDA AAATY V GG
Sbjct  94   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG  135


>gi|254365653|ref|ZP_04981698.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
 gi|297635651|ref|ZP_06953431.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
 gi|297732649|ref|ZP_06961767.1| PE family protein [Mycobacterium tuberculosis KZN R506]
 gi|134151166|gb|EBA43211.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
Length=107

 Score = 95.9 bits (237),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 82/102 (81%), Positives = 86/102 (85%), Gaps = 0/102 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            +TLRVVPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G E
Sbjct  4    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  63

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG  102
            HA +  EGVEELGR+GV VGESG  Y AGDA AAATY V GG
Sbjct  64   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG  105


>gi|240170992|ref|ZP_04749651.1| hypothetical protein MkanA1_16900 [Mycobacterium kansasii ATCC 
12478]
Length=104

 Score = 95.9 bits (237),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 81/97 (84%), Positives = 84/97 (87%), Gaps = 0/97 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           MTL VVPEGLAAASAAVEALTARLAAAHA+AAPVITAVVPPAADPVSLQT  G SA G E
Sbjct  1   MTLWVVPEGLAAASAAVEALTARLAAAHAAAAPVITAVVPPAADPVSLQTGIGLSALGNE  60

Query  61  HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY  97
           H  + AE VEELGR+GVGVGESG SY AGDAAAA TY
Sbjct  61  HVAMAAEAVEELGRSGVGVGESGVSYAAGDAAAAGTY  97


>gi|306777325|ref|ZP_07415662.1| putative PE family protein [Mycobacterium tuberculosis SUMu001]
 gi|306973440|ref|ZP_07486101.1| putative PE family protein [Mycobacterium tuberculosis SUMu010]
 gi|307085746|ref|ZP_07494859.1| putative PE family protein [Mycobacterium tuberculosis SUMu012]
 gi|308214314|gb|EFO73713.1| putative PE family protein [Mycobacterium tuberculosis SUMu001]
 gi|308357183|gb|EFP46034.1| putative PE family protein [Mycobacterium tuberculosis SUMu010]
 gi|308364738|gb|EFP53589.1| putative PE family protein [Mycobacterium tuberculosis SUMu012]
 gi|323718352|gb|EGB27528.1| PE family protein [Mycobacterium tuberculosis CDC1551A]
 gi|339299470|gb|AEJ51580.1| PE family protein [Mycobacterium tuberculosis CCDC5180]
Length=105

 Score = 95.9 bits (237),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 82/102 (81%), Positives = 86/102 (85%), Gaps = 0/102 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            +TLRVVPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G E
Sbjct  2    VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  61

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG  102
            HA +  EGVEELGR+GV VGESG  Y AGDA AAATY V GG
Sbjct  62   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG  103


>gi|308372403|ref|ZP_07428546.2| putative PE family protein [Mycobacterium tuberculosis SUMu004]
 gi|308333337|gb|EFP22188.1| putative PE family protein [Mycobacterium tuberculosis SUMu004]
Length=102

 Score = 94.7 bits (234),  Expect = 4e-18, Method: Compositional matrix adjust.
 Identities = 74/93 (80%), Positives = 78/93 (84%), Gaps = 0/93 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            +TL VVPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G E
Sbjct  10   VTLSVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  69

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAA  93
            HA +  EGVEELGR+GV VGESG  Y AGDA A
Sbjct  70   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVA  102


>gi|167966626|ref|ZP_02548903.1| PE family protein [Mycobacterium tuberculosis H37Ra]
Length=107

 Score = 93.2 bits (230),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 81/102 (80%), Positives = 85/102 (84%), Gaps = 0/102 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            +TL VVPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G E
Sbjct  4    VTLSVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  63

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG  102
            HA +  EGVEELGR+GV VGESG  Y AGDA AAATY V GG
Sbjct  64   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG  105


>gi|306804804|ref|ZP_07441472.1| putative PE family protein [Mycobacterium tuberculosis SUMu008]
 gi|306808997|ref|ZP_07445665.1| putative PE family protein [Mycobacterium tuberculosis SUMu007]
 gi|308372321|ref|ZP_07667351.1| PE family protein [Mycobacterium tuberculosis SUMu004]
 6 more sequence titles
 Length=105

 Score = 92.8 bits (229),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 81/102 (80%), Positives = 85/102 (84%), Gaps = 0/102 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            +TL VVPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G E
Sbjct  2    VTLSVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  61

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG  102
            HA +  EGVEELGR+GV VGESG  Y AGDA AAATY V GG
Sbjct  62   HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG  103


>gi|41406220|ref|NP_959056.1| hypothetical protein MAP0122 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118464188|ref|YP_879413.1| PE family protein [Mycobacterium avium 104]
 gi|41394568|gb|AAS02439.1| PE_1 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118165475|gb|ABK66372.1| PE family protein [Mycobacterium avium 104]
 gi|336458087|gb|EGO37073.1| PE family protein [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=101

 Score = 90.5 bits (223),  Expect = 7e-17, Method: Compositional matrix adjust.
 Identities = 64/97 (66%), Positives = 81/97 (84%), Gaps = 0/97 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           MTLRV+PEGLAA SAAV+A+TA+LAA HA+AAPV++ VVPPAADPVSL  AA FS +G +
Sbjct  1   MTLRVIPEGLAATSAAVDAITAQLAAVHAAAAPVVSVVVPPAADPVSLAAAAVFSERGSQ  60

Query  61  HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY  97
           H+    +GVE LGRAG+GV  +G +Y+AGDAA+A+TY
Sbjct  61  HSAAATKGVEVLGRAGLGVSLAGVNYVAGDAASASTY  97


>gi|342860175|ref|ZP_08716827.1| PE family protein [Mycobacterium colombiense CECT 3035]
 gi|342132553|gb|EGT85782.1| PE family protein [Mycobacterium colombiense CECT 3035]
Length=101

 Score = 89.7 bits (221),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 65/97 (68%), Positives = 81/97 (84%), Gaps = 0/97 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           MTLRV+PEGLAA SAAV+A+TA+LAA HA+AAPV++ VVPPAADPVSL  AA FS +G +
Sbjct  1   MTLRVLPEGLAATSAAVDAITAQLAAVHAAAAPVVSVVVPPAADPVSLVAAAVFSERGSQ  60

Query  61  HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY  97
           H+   A+GVE LGRAG+GV  +G +Y+AGDAA A+TY
Sbjct  61  HSAAAAKGVEVLGRAGLGVSLAGVNYVAGDAAGASTY  97


>gi|254773162|ref|ZP_05214678.1| PE family protein [Mycobacterium avium subsp. avium ATCC 25291]
 gi|212595728|gb|ACJ35519.1| PE1 [Mycobacterium avium subsp. avium]
Length=101

 Score = 89.4 bits (220),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 63/97 (65%), Positives = 80/97 (83%), Gaps = 0/97 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           MTLRV+PEGLAA SAAV+ +TA+LAA HA+AAPV++ VVPPAADPVSL  AA FS +G +
Sbjct  1   MTLRVIPEGLAATSAAVDVITAQLAAVHAAAAPVVSVVVPPAADPVSLAAAAVFSERGSQ  60

Query  61  HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY  97
           H+    +GVE LGRAG+GV  +G +Y+AGDAA+A+TY
Sbjct  61  HSAAATKGVEVLGRAGLGVSLAGVNYVAGDAASASTY  97


>gi|183983962|ref|YP_001852253.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183177288|gb|ACC42398.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=103

 Score = 89.0 bits (219),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 72/97 (75%), Positives = 82/97 (85%), Gaps = 0/97 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           MTL+VVPEGL AASAAV+A+TARLAAAHA+AAP I+AVVPPA DPVSLQTA  FSAQG E
Sbjct  1   MTLQVVPEGLLAASAAVQAITARLAAAHAAAAPAISAVVPPAVDPVSLQTAVVFSAQGGE  60

Query  61  HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY  97
            A+V  +GV+EL R+GVGV ESGA Y A DA AAA+Y
Sbjct  61  RALVGVQGVDELARSGVGVAESGADYAARDAMAAASY  97


>gi|308380551|ref|ZP_07490320.2| putative PE family protein [Mycobacterium tuberculosis SUMu011]
 gi|313659981|ref|ZP_07816861.1| PE family protein [Mycobacterium tuberculosis KZN V2475]
 gi|308361135|gb|EFP49986.1| putative PE family protein [Mycobacterium tuberculosis SUMu011]
Length=100

 Score = 87.8 bits (216),  Expect = 5e-16, Method: Compositional matrix adjust.
 Identities = 78/98 (80%), Positives = 82/98 (84%), Gaps = 0/98 (0%)

Query  5    VVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVEHAVV  64
            +VPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G EHA +
Sbjct  1    MVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSEHAAI  60

Query  65   TAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG  102
              EGVEELGR+GV VGESG  Y AGDA AAATY V GG
Sbjct  61   AGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG  98


>gi|308369801|ref|ZP_07419129.2| PE family protein [Mycobacterium tuberculosis SUMu002]
 gi|308371210|ref|ZP_07424193.2| PE family protein [Mycobacterium tuberculosis SUMu003]
 gi|308373640|ref|ZP_07433147.2| putative PE family protein [Mycobacterium tuberculosis SUMu005]
 gi|308374703|ref|ZP_07437033.2| putative PE family protein [Mycobacterium tuberculosis SUMu006]
 gi|308326369|gb|EFP15220.1| PE family protein [Mycobacterium tuberculosis SUMu002]
 gi|308329490|gb|EFP18341.1| PE family protein [Mycobacterium tuberculosis SUMu003]
 gi|308336869|gb|EFP25720.1| putative PE family protein [Mycobacterium tuberculosis SUMu005]
 gi|308341019|gb|EFP29870.1| putative PE family protein [Mycobacterium tuberculosis SUMu006]
Length=104

 Score = 87.8 bits (216),  Expect = 5e-16, Method: Compositional matrix adjust.
 Identities = 69/86 (81%), Positives = 73/86 (85%), Gaps = 0/86 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           +TL VVPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G E
Sbjct  10  VTLSVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE  69

Query  61  HAVVTAEGVEELGRAGVGVGESGASY  86
           HA +  EGVEELGR+GV VGESG  Y
Sbjct  70  HAAIAGEGVEELGRSGVAVGESGIGY  95


>gi|340626400|ref|YP_004744852.1| PE family protein [Mycobacterium canettii CIPT 140010059]
 gi|340004590|emb|CCC43734.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=102

 Score = 87.4 bits (215),  Expect = 6e-16, Method: Compositional matrix adjust.
 Identities = 67/97 (70%), Positives = 78/97 (81%), Gaps = 0/97 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           MTLRVVPE LA ASAA+EA+TARLAAAHA+AAP I AV+PP +D VS+  A  FS  G +
Sbjct  1   MTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ  60

Query  61  HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY  97
           H  + A+GVEELGR+GVGV ESGASY AGDA AAA+Y
Sbjct  61  HVAMAAQGVEELGRSGVGVAESGASYAAGDALAAASY  97


>gi|15840844|ref|NP_335881.1| PE family protein [Mycobacterium tuberculosis CDC1551]
 gi|31792580|ref|NP_855073.1| PE family protein [Mycobacterium bovis AF2122/97]
 gi|57116857|ref|YP_177805.1| PE family protein [Mycobacterium tuberculosis H37Rv]
 76 more sequence titles
 Length=102

 Score = 87.4 bits (215),  Expect = 6e-16, Method: Compositional matrix adjust.
 Identities = 66/97 (69%), Positives = 77/97 (80%), Gaps = 0/97 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           MTLRVVPE LA ASAA+EA+TARLAAAHA+AAP I AV+PP +D VS+  A  FS  G +
Sbjct  1   MTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ  60

Query  61  HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY  97
           H  + A+GVEELGR+GVGV ESGASY A DA AAA+Y
Sbjct  61  HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASY  97


>gi|240168395|ref|ZP_04747054.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=104

 Score = 86.7 bits (213),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 66/90 (74%), Positives = 75/90 (84%), Gaps = 0/90 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           MTL VVPEGL  A+AAVEAL+ARLAAAHA+AAP+IT VV PAADPVSL+TAAG SA GV 
Sbjct  1   MTLWVVPEGLTGAAAAVEALSARLAAAHAAAAPLITGVVAPAADPVSLRTAAGLSACGVH  60

Query  61  HAVVTAEGVEELGRAGVGVGESGASYLAGD  90
           H  +  EGVEEL R+GVG+GE+G SY AGD
Sbjct  61  HVGIATEGVEELARSGVGIGEAGVSYTAGD  90


>gi|240173532|ref|ZP_04752190.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=108

 Score = 86.3 bits (212),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 71/101 (71%), Positives = 83/101 (83%), Gaps = 0/101 (0%)

Query  1    MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
            +TL VVPEGLA A+AAVEAL+ARLAAAHA+AAP+I+AVV P ADPVSL TAAGFSA G+E
Sbjct  5    VTLWVVPEGLAGAAAAVEALSARLAAAHAAAAPMISAVVAPXADPVSLSTAAGFSAGGIE  64

Query  61   HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVG  101
            H  V  E VEEL R+G G+G +G SY AGD+AAA TYG+ G
Sbjct  65   HVGVATEAVEELTRSGAGLGTAGISYAAGDSAAALTYGLAG  105


>gi|254364274|ref|ZP_04980320.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
 gi|134149788|gb|EBA41833.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
Length=102

 Score = 86.3 bits (212),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 65/97 (68%), Positives = 76/97 (79%), Gaps = 0/97 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           MTLRVVPE LA ASAA+EA+TARLAAAHA+AAP I AV+PP +D VS+     FS  G +
Sbjct  1   MTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNTVEFSVHGSQ  60

Query  61  HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY  97
           H  + A+GVEELGR+GVGV ESGASY A DA AAA+Y
Sbjct  61  HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASY  97


>gi|183985227|ref|YP_001853518.1| PE family protein, PE5_1 [Mycobacterium marinum M]
 gi|183178553|gb|ACC43663.1| PE family protein, PE5_1 [Mycobacterium marinum M]
Length=103

 Score = 85.9 bits (211),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 66/86 (77%), Positives = 75/86 (88%), Gaps = 0/86 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           M LRV+PEGLA ASAAV ALTARLAAAHA AAP ITAV+PPAADPVS++ AAGFSA GVE
Sbjct  1   MMLRVIPEGLAGASAAVAALTARLAAAHAVAAPAITAVIPPAADPVSVRNAAGFSAVGVE  60

Query  61  HAVVTAEGVEELGRAGVGVGESGASY  86
           H+ +  EG+EELGR+GVGVGE+G SY
Sbjct  61  HSAMATEGIEELGRSGVGVGEAGISY  86


>gi|212596236|gb|ACJ35562.1| PE1 [Mycobacterium intracellulare ATCC 13950]
Length=105

 Score = 77.8 bits (190),  Expect = 5e-13, Method: Compositional matrix adjust.
 Identities = 68/97 (71%), Positives = 79/97 (82%), Gaps = 0/97 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           MTLRV+PEGLAA SAAVEA+TA+LAAAHA+AAPV++AVVPPAADPVSL  AA FS +G +
Sbjct  4   MTLRVLPEGLAATSAAVEAITAQLAAAHAAAAPVVSAVVPPAADPVSLGAAAVFSGRGSQ  63

Query  61  HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY  97
           H    A+GVE LGRAG+GV  +G  Y A DAA AATY
Sbjct  64  HTAAAAKGVEVLGRAGLGVSLAGVGYAAQDAADAATY  100


>gi|254821558|ref|ZP_05226559.1| PE family protein [Mycobacterium intracellulare ATCC 13950]
Length=102

 Score = 77.4 bits (189),  Expect = 6e-13, Method: Compositional matrix adjust.
 Identities = 68/97 (71%), Positives = 79/97 (82%), Gaps = 0/97 (0%)

Query  1   MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE  60
           MTLRV+PEGLAA SAAVEA+TA+LAAAHA+AAPV++AVVPPAADPVSL  AA FS +G +
Sbjct  1   MTLRVLPEGLAATSAAVEAITAQLAAAHAAAAPVVSAVVPPAADPVSLGAAAVFSGRGSQ  60

Query  61  HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY  97
           H    A+GVE LGRAG+GV  +G  Y A DAA AATY
Sbjct  61  HTAAAAKGVEVLGRAGLGVSLAGVGYAAQDAADAATY  97



Lambda     K      H
   0.311    0.124    0.334 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 128294982110




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40