BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0285
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
gi|15839671|ref|NP_334708.1| PE family protein [Mycobacterium tu... 184 3e-45
gi|118616921|ref|YP_905253.1| PE family protein [Mycobacterium u... 131 3e-29
gi|15828365|ref|NP_302628.1| PE-family protein [Mycobacterium le... 130 5e-29
gi|118467190|ref|YP_883991.1| PE family protein [Mycobacterium a... 127 5e-28
gi|41409879|ref|NP_962715.1| hypothetical protein MAP3781 [Mycob... 126 1e-27
gi|145220930|ref|YP_001131608.1| PE domain-containing protein [M... 123 7e-27
gi|296167588|ref|ZP_06849913.1| PE-family protein [Mycobacterium... 122 1e-26
gi|254818902|ref|ZP_05223903.1| PE family protein [Mycobacterium... 122 1e-26
gi|118617769|ref|YP_906101.1| PE family protein [Mycobacterium u... 121 4e-26
gi|118470806|ref|YP_885029.1| PE family protein [Mycobacterium s... 117 6e-25
gi|254777309|ref|ZP_05218825.1| hypothetical protein MaviaA2_219... 117 7e-25
gi|108797353|ref|YP_637550.1| PE-like protein [Mycobacterium sp.... 117 8e-25
gi|342859231|ref|ZP_08715885.1| hypothetical protein MCOL_10143 ... 115 2e-24
gi|169627151|ref|YP_001700800.1| PE family protein [Mycobacteriu... 113 1e-23
gi|240168499|ref|ZP_04747158.1| PE family protein, PE5 [Mycobact... 111 3e-23
gi|240169093|ref|ZP_04747752.1| hypothetical protein MkanA1_0725... 111 3e-23
gi|240173110|ref|ZP_04751768.1| PE-family protein [Mycobacterium... 109 2e-22
gi|333988933|ref|YP_004521547.1| PE family protein PE5 [Mycobact... 109 2e-22
gi|240173309|ref|ZP_04751967.1| PE family protein [Mycobacterium... 108 3e-22
gi|15827194|ref|NP_301457.1| PE-family protein [Mycobacterium le... 105 2e-21
gi|317506395|ref|ZP_07964203.1| PE family protein [Segniliparus ... 103 6e-21
gi|120401439|ref|YP_951268.1| PE domain-containing protein [Myco... 103 7e-21
gi|118619480|ref|YP_907812.1| PE family protein [Mycobacterium u... 101 4e-20
gi|240171484|ref|ZP_04750143.1| PE domain-containing protein [My... 100 8e-20
gi|340628015|ref|YP_004746467.1| PE family protein [Mycobacteriu... 100 1e-19
gi|169627767|ref|YP_001701416.1| PE family protein [Mycobacteriu... 99.8 1e-19
gi|323718348|gb|EGB27525.1| PE family protein [Mycobacterium tub... 99.4 1e-19
gi|31794200|ref|NP_856693.1| PE family protein [Mycobacterium bo... 98.2 4e-19
gi|336460186|gb|EGO39090.1| PE family protein [Mycobacterium avi... 97.1 8e-19
gi|15842585|ref|NP_337622.1| PE family protein [Mycobacterium tu... 96.7 1e-18
gi|254365653|ref|ZP_04981698.1| PE family protein [Mycobacterium... 95.9 2e-18
gi|240170992|ref|ZP_04749651.1| hypothetical protein MkanA1_1690... 95.9 2e-18
gi|306777325|ref|ZP_07415662.1| putative PE family protein [Myco... 95.9 2e-18
gi|308372403|ref|ZP_07428546.2| putative PE family protein [Myco... 94.7 4e-18
gi|167966626|ref|ZP_02548903.1| PE family protein [Mycobacterium... 93.2 1e-17
gi|306804804|ref|ZP_07441472.1| putative PE family protein [Myco... 92.8 1e-17
gi|41406220|ref|NP_959056.1| hypothetical protein MAP0122 [Mycob... 90.5 7e-17
gi|342860175|ref|ZP_08716827.1| PE family protein [Mycobacterium... 89.7 1e-16
gi|254773162|ref|ZP_05214678.1| PE family protein [Mycobacterium... 89.4 2e-16
gi|183983962|ref|YP_001852253.1| PE-PGRS family protein [Mycobac... 89.0 2e-16
gi|308380551|ref|ZP_07490320.2| putative PE family protein [Myco... 87.8 5e-16
gi|308369801|ref|ZP_07419129.2| PE family protein [Mycobacterium... 87.8 5e-16
gi|340626400|ref|YP_004744852.1| PE family protein [Mycobacteriu... 87.4 6e-16
gi|15840844|ref|NP_335881.1| PE family protein [Mycobacterium tu... 87.4 6e-16
gi|240168395|ref|ZP_04747054.1| PE family protein [Mycobacterium... 86.7 1e-15
gi|240173532|ref|ZP_04752190.1| PE family protein [Mycobacterium... 86.3 1e-15
gi|254364274|ref|ZP_04980320.1| PE family protein [Mycobacterium... 86.3 1e-15
gi|183985227|ref|YP_001853518.1| PE family protein, PE5_1 [Mycob... 85.9 2e-15
gi|212596236|gb|ACJ35562.1| PE1 [Mycobacterium intracellulare AT... 77.8 5e-13
gi|254821558|ref|ZP_05226559.1| PE family protein [Mycobacterium... 77.4 6e-13
>gi|15839671|ref|NP_334708.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|31791464|ref|NP_853957.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57116715|ref|YP_177710.1| PE family protein [Mycobacterium tuberculosis H37Rv]
81 more sequence titles
Length=102
Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/102 (100%), Positives = 102/102 (100%), Gaps = 0/102 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE
Sbjct 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG 102
HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG
Sbjct 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG 102
>gi|118616921|ref|YP_905253.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|183980572|ref|YP_001848863.1| PE family protein, PE5 [Mycobacterium marinum M]
gi|118569031|gb|ABL03782.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|183173898|gb|ACC39008.1| PE family protein, PE5 [Mycobacterium marinum M]
Length=102
Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/101 (89%), Positives = 94/101 (94%), Gaps = 0/101 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRVVPEGLAAASAAVEALTARLAAAHASA+PVI+AVVP A DPVSLQTAAGFSAQG+E
Sbjct 1 MTLRVVPEGLAAASAAVEALTARLAAAHASASPVISAVVPAAVDPVSLQTAAGFSAQGIE 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVG 101
HA V AEGVEELGRAG+GVGESG SYLAGDA AAATYG+ G
Sbjct 61 HAAVAAEGVEELGRAGLGVGESGVSYLAGDAVAAATYGIAG 101
>gi|15828365|ref|NP_302628.1| PE-family protein [Mycobacterium leprae TN]
gi|221230842|ref|YP_002504258.1| PE-family protein [Mycobacterium leprae Br4923]
gi|13093795|emb|CAC32065.1| PE-family protein [Mycobacterium leprae]
gi|219933949|emb|CAR72633.1| PE-family protein [Mycobacterium leprae Br4923]
Length=102
Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/100 (73%), Positives = 84/100 (84%), Gaps = 0/100 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRVVPE LAA S A++ALTARL AAHA+A P + AVVPPAADPVSLQTAAGFSA+G E
Sbjct 1 MTLRVVPEKLAATSEAMKALTARLEAAHAAAFPCLVAVVPPAADPVSLQTAAGFSARGQE 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVV 100
HA+V A+GVEELGRAG+GVG+S Y DA AA+TYG+V
Sbjct 61 HALVAAQGVEELGRAGIGVGQSSTHYAISDALAASTYGIV 100
>gi|118467190|ref|YP_883991.1| PE family protein [Mycobacterium avium 104]
gi|118168477|gb|ABK69374.1| pe family protein [Mycobacterium avium 104]
gi|212595842|gb|ACJ35527.1| PE11 [Mycobacterium avium subsp. avium]
Length=102
Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/101 (87%), Positives = 93/101 (93%), Gaps = 0/101 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRVVPEGLAA SAAVEALTARLAAAHA+AAP ITAVVPPAADPVSLQTA GFSAQG E
Sbjct 1 MTLRVVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAADPVSLQTALGFSAQGQE 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVG 101
H+ V A+GVEELGRAGVGVGE+GASYLAGD AAAAT+G+ G
Sbjct 61 HSAVAAQGVEELGRAGVGVGEAGASYLAGDTAAAATFGIAG 101
>gi|41409879|ref|NP_962715.1| hypothetical protein MAP3781 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398711|gb|AAS06331.1| hypothetical protein MAP_3781 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=102
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/101 (86%), Positives = 93/101 (93%), Gaps = 0/101 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRVVPEGLAA SAAVEALTARLAAAHA+AAP ITAVVPPAADPVSLQTA GFSAQG E
Sbjct 1 MTLRVVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAADPVSLQTALGFSAQGQE 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVG 101
H+ V A+GVEELGRAGVGVG++GASYLAGD AAAAT+G+ G
Sbjct 61 HSAVAAQGVEELGRAGVGVGQAGASYLAGDTAAAATFGIAG 101
>gi|145220930|ref|YP_001131608.1| PE domain-containing protein [Mycobacterium gilvum PYR-GCK]
gi|315442100|ref|YP_004074979.1| PE family protein [Mycobacterium sp. Spyr1]
gi|145213416|gb|ABP42820.1| PE domain protein [Mycobacterium gilvum PYR-GCK]
gi|315260403|gb|ADT97144.1| PE family protein [Mycobacterium sp. Spyr1]
Length=102
Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/102 (74%), Positives = 87/102 (86%), Gaps = 0/102 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRVVPEGL AASAAVEALTAR+AAAHA+AAP++TAV+PPAAD VSLQTA G SA GVE
Sbjct 1 MTLRVVPEGLTAASAAVEALTARMAAAHAAAAPLVTAVLPPAADAVSLQTATGLSANGVE 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG 102
H + A GVEELGR+GVGVG+S ASY++GDA AA +Y + G
Sbjct 61 HQSIAARGVEELGRSGVGVGDSAASYVSGDAMAATSYLIARG 102
>gi|296167588|ref|ZP_06849913.1| PE-family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897131|gb|EFG76742.1| PE-family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=102
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/101 (86%), Positives = 91/101 (91%), Gaps = 0/101 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRVVPEGLAA SAAVEALTARLAAAHA+AAP ITAVVPPA DPVS+QTA GFSAQG E
Sbjct 1 MTLRVVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAVDPVSVQTAVGFSAQGSE 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVG 101
HA V A+GVEELGRAGVGVGE+GASYLAGD AAAAT+G G
Sbjct 61 HAAVAAQGVEELGRAGVGVGEAGASYLAGDTAAAATFGFGG 101
>gi|254818902|ref|ZP_05223903.1| PE family protein [Mycobacterium intracellulare ATCC 13950]
gi|212596327|gb|ACJ35569.1| PE11 [Mycobacterium intracellulare ATCC 13950]
Length=102
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/101 (83%), Positives = 91/101 (91%), Gaps = 0/101 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRVVPEGLAA SAAVEALTARLAAAHA+AAP ITAVVPPA DPVSLQTA GFSAQG E
Sbjct 1 MTLRVVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAVDPVSLQTAMGFSAQGQE 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVG 101
H+ + +GVEELGRAG+GVGE+GASYLAGD AAAAT+G+ G
Sbjct 61 HSAMAVQGVEELGRAGLGVGEAGASYLAGDTAAAATFGIAG 101
>gi|118617769|ref|YP_906101.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|183983006|ref|YP_001851297.1| PE family protein [Mycobacterium marinum M]
gi|118569879|gb|ABL04630.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|183176332|gb|ACC41442.1| PE family protein [Mycobacterium marinum M]
Length=101
Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/99 (79%), Positives = 86/99 (87%), Gaps = 0/99 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
M LRVVPEGL A SAAVEALTARLAAA+A+ AP+ITAVVPPAADPVSL+ A GFSA GVE
Sbjct 1 MVLRVVPEGLVATSAAVEALTARLAAANAALAPLITAVVPPAADPVSLEAAIGFSAHGVE 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGV 99
H VT EG+EELGR+GVGVGESG SY +GDAAAA TYG+
Sbjct 61 HVAVTTEGIEELGRSGVGVGESGLSYASGDAAAALTYGL 99
>gi|118470806|ref|YP_885029.1| PE family protein [Mycobacterium smegmatis str. MC2 155]
gi|118172093|gb|ABK72989.1| pe family protein [Mycobacterium smegmatis str. MC2 155]
Length=103
Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/97 (78%), Positives = 85/97 (88%), Gaps = 0/97 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRVVPEGL AAS+AVEALTARLAAAHA+AAP+I+ V+PPAAD VSLQTAAGFSA G +
Sbjct 1 MTLRVVPEGLTAASSAVEALTARLAAAHAAAAPMISTVLPPAADAVSLQTAAGFSANGAQ 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY 97
+ V A+GVEELGR+GVGVGESG SY GDA AAA+Y
Sbjct 61 QSAVAAQGVEELGRSGVGVGESGVSYATGDAQAAASY 97
>gi|254777309|ref|ZP_05218825.1| hypothetical protein MaviaA2_21931 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=98
Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/97 (85%), Positives = 89/97 (92%), Gaps = 0/97 (0%)
Query 5 VVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVEHAVV 64
+VPEGLAA SAAVEALTARLAAAHA+AAP ITAVVPPAADPVSLQTA GFSAQG EH+ V
Sbjct 1 MVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAADPVSLQTALGFSAQGQEHSAV 60
Query 65 TAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVG 101
A+GVEELGRAGVGVGE+GASYLAGD AAAAT+G+ G
Sbjct 61 AAQGVEELGRAGVGVGEAGASYLAGDTAAAATFGIAG 97
>gi|108797353|ref|YP_637550.1| PE-like protein [Mycobacterium sp. MCS]
gi|119866438|ref|YP_936390.1| PE domain-containing protein [Mycobacterium sp. KMS]
gi|126432975|ref|YP_001068666.1| PE domain-containing protein [Mycobacterium sp. JLS]
gi|108767772|gb|ABG06494.1| PE-like protein [Mycobacterium sp. MCS]
gi|119692527|gb|ABL89600.1| PE domain protein [Mycobacterium sp. KMS]
gi|126232775|gb|ABN96175.1| PE domain protein [Mycobacterium sp. JLS]
Length=102
Score = 117 bits (292), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/102 (73%), Positives = 84/102 (83%), Gaps = 0/102 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRVVPEGL AASAAVEALTARLA+AHA+AAP+I V+PPAAD VSLQTAAG SA G
Sbjct 1 MTLRVVPEGLTAASAAVEALTARLASAHAAAAPLIGTVLPPAADAVSLQTAAGLSANGGR 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG 102
H V A+GV+ELGR+GVGVG+SGASY AGDA A+ Y + G
Sbjct 61 HEAVAAQGVQELGRSGVGVGQSGASYAAGDAMNASAYMIARG 102
>gi|342859231|ref|ZP_08715885.1| hypothetical protein MCOL_10143 [Mycobacterium colombiense CECT
3035]
gi|342133472|gb|EGT86675.1| hypothetical protein MCOL_10143 [Mycobacterium colombiense CECT
3035]
Length=98
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/97 (83%), Positives = 89/97 (92%), Gaps = 0/97 (0%)
Query 5 VVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVEHAVV 64
+VPEGLAA SAAVEALTARLAAAHA+AAP ITAVVPPA DPVSLQTAAGFSAQG EH+ +
Sbjct 1 MVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAVDPVSLQTAAGFSAQGQEHSAM 60
Query 65 TAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVG 101
A+GVEELGRAGVGVG++GASYLAGD AAAAT+G+ G
Sbjct 61 AAQGVEELGRAGVGVGQAGASYLAGDTAAAATFGIAG 97
>gi|169627151|ref|YP_001700800.1| PE family protein [Mycobacterium abscessus ATCC 19977]
gi|169629317|ref|YP_001702966.1| PE family protein [Mycobacterium abscessus ATCC 19977]
gi|169239118|emb|CAM60146.1| Probable PE family protein [Mycobacterium abscessus]
gi|169241284|emb|CAM62312.1| Hypothetical PE family protein [Mycobacterium abscessus]
Length=102
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/102 (75%), Positives = 84/102 (83%), Gaps = 0/102 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
M L VVPEGL A SAAVEALTARLAAAHA+AAPVI AVVPPAADPVSL+TAAGFSA+G+E
Sbjct 1 MNLNVVPEGLTATSAAVEALTARLAAAHAAAAPVIGAVVPPAADPVSLETAAGFSARGIE 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG 102
H+ V A+ VEELGRAG+GV ES ASY GD AAA Y + G
Sbjct 61 HSGVAAQAVEELGRAGLGVSESAASYTTGDMQAAAAYMIARG 102
>gi|240168499|ref|ZP_04747158.1| PE family protein, PE5 [Mycobacterium kansasii ATCC 12478]
Length=104
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/102 (86%), Positives = 92/102 (91%), Gaps = 0/102 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRVVPEGLAAASAAVEALTARLAAA A+AAP+ITAVVPPAADPVSLQTAAGFS QGVE
Sbjct 1 MTLRVVPEGLAAASAAVEALTARLAAAQAAAAPLITAVVPPAADPVSLQTAAGFSGQGVE 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG 102
HA + AEGVEELGR+GVGVGE+G SY GDAAAAATY GG
Sbjct 61 HAAIVAEGVEELGRSGVGVGEAGVSYAVGDAAAAATYLASGG 102
>gi|240169093|ref|ZP_04747752.1| hypothetical protein MkanA1_07254 [Mycobacterium kansasii ATCC
12478]
Length=103
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/100 (77%), Positives = 82/100 (82%), Gaps = 0/100 (0%)
Query 3 LRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVEHA 62
LRVVPEGLAAASAAVEALTARL AAHA AAP+ITAVVPPAADPVS+ TAAGFS QG HA
Sbjct 2 LRVVPEGLAAASAAVEALTARLTAAHAGAAPLITAVVPPAADPVSVATAAGFSVQGDIHA 61
Query 63 VVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG 102
V A GVEELGR+G +GESG Y AGDA AA YG+ GG
Sbjct 62 TVAAGGVEELGRSGAALGESGIGYAAGDAVAACAYGISGG 101
>gi|240173110|ref|ZP_04751768.1| PE-family protein [Mycobacterium kansasii ATCC 12478]
Length=102
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/90 (89%), Positives = 82/90 (92%), Gaps = 0/90 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRVVPEGLAAASAAVEALTARLAAAHA+AAP I AVVPPA DPVSLQTAA FS QG E
Sbjct 1 MTLRVVPEGLAAASAAVEALTARLAAAHAAAAPSIVAVVPPAVDPVSLQTAAEFSVQGQE 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGD 90
HAVV +GVEELGRAGVGVGESGASYLAGD
Sbjct 61 HAVVATQGVEELGRAGVGVGESGASYLAGD 90
>gi|333988933|ref|YP_004521547.1| PE family protein PE5 [Mycobacterium sp. JDM601]
gi|333484901|gb|AEF34293.1| PE family protein PE5 [Mycobacterium sp. JDM601]
Length=103
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/97 (84%), Positives = 86/97 (89%), Gaps = 0/97 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTL VVPEGLAAASAAVEALTARLAAA A+AAP+ITAVVPPAADPVSLQTAAGFSAQG E
Sbjct 1 MTLNVVPEGLAAASAAVEALTARLAAAQAAAAPLITAVVPPAADPVSLQTAAGFSAQGTE 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY 97
HA V A+G ELGRAGVGVGESG +Y AGDAA A+ Y
Sbjct 61 HAAVAAQGATELGRAGVGVGESGVNYAAGDAAGASRY 97
>gi|240173309|ref|ZP_04751967.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=104
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/102 (79%), Positives = 86/102 (85%), Gaps = 0/102 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTL+VVPEGLAAAS AVEALTARLAAAHA+A P ITAVVPPAADPVS+QTAAGFS G
Sbjct 1 MTLQVVPEGLAAASGAVEALTARLAAAHAAALPAITAVVPPAADPVSIQTAAGFSTHGSA 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG 102
HA V AEG+EELGR+G+GV ESG SY AGDAAAA TY GG
Sbjct 61 HAAVVAEGIEELGRSGIGVAESGVSYAAGDAAAAVTYSASGG 102
>gi|15827194|ref|NP_301457.1| PE-family protein [Mycobacterium leprae TN]
gi|221229672|ref|YP_002503088.1| PE-family protein [Mycobacterium leprae Br4923]
gi|13092742|emb|CAC30046.1| PE-family protein [Mycobacterium leprae]
gi|219932779|emb|CAR70631.1| PE-family protein [Mycobacterium leprae Br4923]
Length=102
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/97 (57%), Positives = 65/97 (68%), Gaps = 0/97 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTL V+PEGL ASA +EALTA LA HA AAP I V+PP + VS+Q GF+ G +
Sbjct 1 MTLGVIPEGLEGASAVIEALTAHLATVHAEAAPFIMEVIPPGSGSVSVQNQVGFNVHGCQ 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY 97
+ +TA G EELGR GVGV ESG SY DA A A+Y
Sbjct 61 YVAMTAHGAEELGRWGVGVAESGVSYALRDAFAVASY 97
>gi|317506395|ref|ZP_07964203.1| PE family protein [Segniliparus rugosus ATCC BAA-974]
gi|316255311|gb|EFV14573.1| PE family protein [Segniliparus rugosus ATCC BAA-974]
Length=102
Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/98 (72%), Positives = 77/98 (79%), Gaps = 0/98 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
M L+VVPEGL AASA VEALTARLAAA A+AAPVI AVVPPAADPVSLQ AAGFSA+G
Sbjct 1 MILKVVPEGLMAASAEVEALTARLAAAQAAAAPVIGAVVPPAADPVSLQAAAGFSARGSS 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYG 98
H V AE VEELGR+G+GV E+ SY GD AA +G
Sbjct 61 HTAVAAEAVEELGRSGLGVAETAESYAVGDLQGAAVFG 98
>gi|120401439|ref|YP_951268.1| PE domain-containing protein [Mycobacterium vanbaalenii PYR-1]
gi|119954257|gb|ABM11262.1| PE domain protein [Mycobacterium vanbaalenii PYR-1]
Length=102
Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/102 (72%), Positives = 84/102 (83%), Gaps = 0/102 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRVVPEGL AA AAVEALTAR+AAAHA+AAPV+TAV+PPAAD VSLQ A GFSA+ E
Sbjct 1 MTLRVVPEGLTAAGAAVEALTARMAAAHAAAAPVVTAVLPPAADVVSLQAATGFSARAAE 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG 102
H V A+GVEELGR+G+ VGES ASY GDA AA++Y + G
Sbjct 61 HQSVAAQGVEELGRSGIAVGESAASYAGGDAMAASSYLIARG 102
>gi|118619480|ref|YP_907812.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|118571590|gb|ABL06341.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=104
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/86 (75%), Positives = 74/86 (87%), Gaps = 0/86 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
+ LRV+PEGLA ASAAV LTARLAAAHA AAP ITAV+PPAADPVS++ AAGFSA GVE
Sbjct 2 VMLRVIPEGLAGASAAVAGLTARLAAAHAVAAPAITAVIPPAADPVSVRNAAGFSAVGVE 61
Query 61 HAVVTAEGVEELGRAGVGVGESGASY 86
H+ + EG+EELGR+GVGVGE+G SY
Sbjct 62 HSAMATEGIEELGRSGVGVGEAGISY 87
>gi|240171484|ref|ZP_04750143.1| PE domain-containing protein [Mycobacterium kansasii ATCC 12478]
Length=113
Score = 100 bits (249), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/97 (63%), Positives = 73/97 (76%), Gaps = 0/97 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
+TL VVPEGL AASAA+EALT RLAAAHA+A P+IT V PPAADPVS+Q+A +G
Sbjct 12 VTLSVVPEGLIAASAAIEALTTRLAAAHAAAVPLITVVAPPAADPVSVQSAVEAGVRGSA 71
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY 97
HA V A G+E+LGR+GV V ES +Y GDA AA +Y
Sbjct 72 HAAVAARGLEDLGRSGVAVAESATTYATGDAVAAVSY 108
>gi|340628015|ref|YP_004746467.1| PE family protein [Mycobacterium canettii CIPT 140010059]
gi|340006205|emb|CCC45379.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=104
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/102 (83%), Positives = 87/102 (86%), Gaps = 0/102 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRVVPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G E
Sbjct 1 MTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG 102
HA + AEGVEELGR+GV VGESG Y AGDA AAATY V GG
Sbjct 61 HAAIAAEGVEELGRSGVAVGESGVGYAAGDAVAAATYLVSGG 102
>gi|169627767|ref|YP_001701416.1| PE family protein [Mycobacterium abscessus ATCC 19977]
gi|169239734|emb|CAM60762.1| PE family protein [Mycobacterium abscessus]
Length=102
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/97 (69%), Positives = 75/97 (78%), Gaps = 0/97 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
M+L VVPEGL AASAAVEALTARLAA +A+AAPVI AV+PPAADPVS+Q+AA FSA G+E
Sbjct 1 MSLNVVPEGLTAASAAVEALTARLAAVNAAAAPVIGAVMPPAADPVSMQSAALFSAHGLE 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY 97
A ELGR+GVG E+ ASY GD AAATY
Sbjct 61 RTGAGARAAYELGRSGVGATEAAASYTVGDIQAAATY 97
>gi|323718348|gb|EGB27525.1| PE family protein [Mycobacterium tuberculosis CDC1551A]
Length=127
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/94 (81%), Positives = 80/94 (86%), Gaps = 0/94 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
+TLRVVPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G E
Sbjct 34 VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE 93
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAA 94
HA + EGVEELGR+GV VGESG Y AGDA AA
Sbjct 94 HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAA 127
>gi|31794200|ref|NP_856693.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57117050|ref|YP_177685.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|121638905|ref|YP_979129.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
19 more sequence titles
Length=104
Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/102 (82%), Positives = 86/102 (85%), Gaps = 0/102 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRVVPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G E
Sbjct 1 MTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG 102
HA + EGVEELGR+GV VGESG Y AGDA AAATY V GG
Sbjct 61 HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG 102
>gi|336460186|gb|EGO39090.1| PE family protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=80
Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/80 (89%), Positives = 74/80 (93%), Gaps = 0/80 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRVVPEGLAA SAAVEALTARLAAAHA+AAP ITAVVPPAADPVSLQTA GFSAQG E
Sbjct 1 MTLRVVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAADPVSLQTALGFSAQGQE 60
Query 61 HAVVTAEGVEELGRAGVGVG 80
H+ V A+GVEELGRAGVGVG
Sbjct 61 HSAVAAQGVEELGRAGVGVG 80
>gi|15842585|ref|NP_337622.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|148824213|ref|YP_001288967.1| PE family protein [Mycobacterium tuberculosis F11]
gi|289553187|ref|ZP_06442397.1| PE family protein [Mycobacterium tuberculosis KZN 605]
gi|13882898|gb|AAK47436.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|148722740|gb|ABR07365.1| PE family protein [Mycobacterium tuberculosis F11]
gi|289437819|gb|EFD20312.1| PE family protein [Mycobacterium tuberculosis KZN 605]
gi|328457658|gb|AEB03081.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
gi|344220857|gb|AEN01488.1| PE family protein [Mycobacterium tuberculosis CTRI-2]
Length=137
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/102 (81%), Positives = 86/102 (85%), Gaps = 0/102 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
+TLRVVPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G E
Sbjct 34 VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE 93
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG 102
HA + EGVEELGR+GV VGESG Y AGDA AAATY V GG
Sbjct 94 HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG 135
>gi|254365653|ref|ZP_04981698.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|297635651|ref|ZP_06953431.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
gi|297732649|ref|ZP_06961767.1| PE family protein [Mycobacterium tuberculosis KZN R506]
gi|134151166|gb|EBA43211.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
Length=107
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/102 (81%), Positives = 86/102 (85%), Gaps = 0/102 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
+TLRVVPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G E
Sbjct 4 VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE 63
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG 102
HA + EGVEELGR+GV VGESG Y AGDA AAATY V GG
Sbjct 64 HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG 105
>gi|240170992|ref|ZP_04749651.1| hypothetical protein MkanA1_16900 [Mycobacterium kansasii ATCC
12478]
Length=104
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/97 (84%), Positives = 84/97 (87%), Gaps = 0/97 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTL VVPEGLAAASAAVEALTARLAAAHA+AAPVITAVVPPAADPVSLQT G SA G E
Sbjct 1 MTLWVVPEGLAAASAAVEALTARLAAAHAAAAPVITAVVPPAADPVSLQTGIGLSALGNE 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY 97
H + AE VEELGR+GVGVGESG SY AGDAAAA TY
Sbjct 61 HVAMAAEAVEELGRSGVGVGESGVSYAAGDAAAAGTY 97
>gi|306777325|ref|ZP_07415662.1| putative PE family protein [Mycobacterium tuberculosis SUMu001]
gi|306973440|ref|ZP_07486101.1| putative PE family protein [Mycobacterium tuberculosis SUMu010]
gi|307085746|ref|ZP_07494859.1| putative PE family protein [Mycobacterium tuberculosis SUMu012]
gi|308214314|gb|EFO73713.1| putative PE family protein [Mycobacterium tuberculosis SUMu001]
gi|308357183|gb|EFP46034.1| putative PE family protein [Mycobacterium tuberculosis SUMu010]
gi|308364738|gb|EFP53589.1| putative PE family protein [Mycobacterium tuberculosis SUMu012]
gi|323718352|gb|EGB27528.1| PE family protein [Mycobacterium tuberculosis CDC1551A]
gi|339299470|gb|AEJ51580.1| PE family protein [Mycobacterium tuberculosis CCDC5180]
Length=105
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/102 (81%), Positives = 86/102 (85%), Gaps = 0/102 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
+TLRVVPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G E
Sbjct 2 VTLRVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE 61
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG 102
HA + EGVEELGR+GV VGESG Y AGDA AAATY V GG
Sbjct 62 HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG 103
>gi|308372403|ref|ZP_07428546.2| putative PE family protein [Mycobacterium tuberculosis SUMu004]
gi|308333337|gb|EFP22188.1| putative PE family protein [Mycobacterium tuberculosis SUMu004]
Length=102
Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/93 (80%), Positives = 78/93 (84%), Gaps = 0/93 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
+TL VVPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G E
Sbjct 10 VTLSVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE 69
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAA 93
HA + EGVEELGR+GV VGESG Y AGDA A
Sbjct 70 HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVA 102
>gi|167966626|ref|ZP_02548903.1| PE family protein [Mycobacterium tuberculosis H37Ra]
Length=107
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/102 (80%), Positives = 85/102 (84%), Gaps = 0/102 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
+TL VVPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G E
Sbjct 4 VTLSVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE 63
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG 102
HA + EGVEELGR+GV VGESG Y AGDA AAATY V GG
Sbjct 64 HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG 105
>gi|306804804|ref|ZP_07441472.1| putative PE family protein [Mycobacterium tuberculosis SUMu008]
gi|306808997|ref|ZP_07445665.1| putative PE family protein [Mycobacterium tuberculosis SUMu007]
gi|308372321|ref|ZP_07667351.1| PE family protein [Mycobacterium tuberculosis SUMu004]
6 more sequence titles
Length=105
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/102 (80%), Positives = 85/102 (84%), Gaps = 0/102 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
+TL VVPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G E
Sbjct 2 VTLSVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE 61
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG 102
HA + EGVEELGR+GV VGESG Y AGDA AAATY V GG
Sbjct 62 HAAIAGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG 103
>gi|41406220|ref|NP_959056.1| hypothetical protein MAP0122 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118464188|ref|YP_879413.1| PE family protein [Mycobacterium avium 104]
gi|41394568|gb|AAS02439.1| PE_1 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118165475|gb|ABK66372.1| PE family protein [Mycobacterium avium 104]
gi|336458087|gb|EGO37073.1| PE family protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=101
Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/97 (66%), Positives = 81/97 (84%), Gaps = 0/97 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRV+PEGLAA SAAV+A+TA+LAA HA+AAPV++ VVPPAADPVSL AA FS +G +
Sbjct 1 MTLRVIPEGLAATSAAVDAITAQLAAVHAAAAPVVSVVVPPAADPVSLAAAAVFSERGSQ 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY 97
H+ +GVE LGRAG+GV +G +Y+AGDAA+A+TY
Sbjct 61 HSAAATKGVEVLGRAGLGVSLAGVNYVAGDAASASTY 97
>gi|342860175|ref|ZP_08716827.1| PE family protein [Mycobacterium colombiense CECT 3035]
gi|342132553|gb|EGT85782.1| PE family protein [Mycobacterium colombiense CECT 3035]
Length=101
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/97 (68%), Positives = 81/97 (84%), Gaps = 0/97 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRV+PEGLAA SAAV+A+TA+LAA HA+AAPV++ VVPPAADPVSL AA FS +G +
Sbjct 1 MTLRVLPEGLAATSAAVDAITAQLAAVHAAAAPVVSVVVPPAADPVSLVAAAVFSERGSQ 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY 97
H+ A+GVE LGRAG+GV +G +Y+AGDAA A+TY
Sbjct 61 HSAAAAKGVEVLGRAGLGVSLAGVNYVAGDAAGASTY 97
>gi|254773162|ref|ZP_05214678.1| PE family protein [Mycobacterium avium subsp. avium ATCC 25291]
gi|212595728|gb|ACJ35519.1| PE1 [Mycobacterium avium subsp. avium]
Length=101
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/97 (65%), Positives = 80/97 (83%), Gaps = 0/97 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRV+PEGLAA SAAV+ +TA+LAA HA+AAPV++ VVPPAADPVSL AA FS +G +
Sbjct 1 MTLRVIPEGLAATSAAVDVITAQLAAVHAAAAPVVSVVVPPAADPVSLAAAAVFSERGSQ 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY 97
H+ +GVE LGRAG+GV +G +Y+AGDAA+A+TY
Sbjct 61 HSAAATKGVEVLGRAGLGVSLAGVNYVAGDAASASTY 97
>gi|183983962|ref|YP_001852253.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183177288|gb|ACC42398.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=103
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/97 (75%), Positives = 82/97 (85%), Gaps = 0/97 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTL+VVPEGL AASAAV+A+TARLAAAHA+AAP I+AVVPPA DPVSLQTA FSAQG E
Sbjct 1 MTLQVVPEGLLAASAAVQAITARLAAAHAAAAPAISAVVPPAVDPVSLQTAVVFSAQGGE 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY 97
A+V +GV+EL R+GVGV ESGA Y A DA AAA+Y
Sbjct 61 RALVGVQGVDELARSGVGVAESGADYAARDAMAAASY 97
>gi|308380551|ref|ZP_07490320.2| putative PE family protein [Mycobacterium tuberculosis SUMu011]
gi|313659981|ref|ZP_07816861.1| PE family protein [Mycobacterium tuberculosis KZN V2475]
gi|308361135|gb|EFP49986.1| putative PE family protein [Mycobacterium tuberculosis SUMu011]
Length=100
Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/98 (80%), Positives = 82/98 (84%), Gaps = 0/98 (0%)
Query 5 VVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVEHAVV 64
+VPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G EHA +
Sbjct 1 MVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSEHAAI 60
Query 65 TAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVGG 102
EGVEELGR+GV VGESG Y AGDA AAATY V GG
Sbjct 61 AGEGVEELGRSGVAVGESGIGYAAGDAVAAATYLVSGG 98
>gi|308369801|ref|ZP_07419129.2| PE family protein [Mycobacterium tuberculosis SUMu002]
gi|308371210|ref|ZP_07424193.2| PE family protein [Mycobacterium tuberculosis SUMu003]
gi|308373640|ref|ZP_07433147.2| putative PE family protein [Mycobacterium tuberculosis SUMu005]
gi|308374703|ref|ZP_07437033.2| putative PE family protein [Mycobacterium tuberculosis SUMu006]
gi|308326369|gb|EFP15220.1| PE family protein [Mycobacterium tuberculosis SUMu002]
gi|308329490|gb|EFP18341.1| PE family protein [Mycobacterium tuberculosis SUMu003]
gi|308336869|gb|EFP25720.1| putative PE family protein [Mycobacterium tuberculosis SUMu005]
gi|308341019|gb|EFP29870.1| putative PE family protein [Mycobacterium tuberculosis SUMu006]
Length=104
Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/86 (81%), Positives = 73/86 (85%), Gaps = 0/86 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
+TL VVPEGLAAASAAVEALTARLAAAHA AAP ITAVV PAADPVSLQ+A GFSA G E
Sbjct 10 VTLSVVPEGLAAASAAVEALTARLAAAHAGAAPAITAVVAPAADPVSLQSAVGFSALGSE 69
Query 61 HAVVTAEGVEELGRAGVGVGESGASY 86
HA + EGVEELGR+GV VGESG Y
Sbjct 70 HAAIAGEGVEELGRSGVAVGESGIGY 95
>gi|340626400|ref|YP_004744852.1| PE family protein [Mycobacterium canettii CIPT 140010059]
gi|340004590|emb|CCC43734.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=102
Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/97 (70%), Positives = 78/97 (81%), Gaps = 0/97 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRVVPE LA ASAA+EA+TARLAAAHA+AAP I AV+PP +D VS+ A FS G +
Sbjct 1 MTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY 97
H + A+GVEELGR+GVGV ESGASY AGDA AAA+Y
Sbjct 61 HVAMAAQGVEELGRSGVGVAESGASYAAGDALAAASY 97
>gi|15840844|ref|NP_335881.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|31792580|ref|NP_855073.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57116857|ref|YP_177805.1| PE family protein [Mycobacterium tuberculosis H37Rv]
76 more sequence titles
Length=102
Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/97 (69%), Positives = 77/97 (80%), Gaps = 0/97 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRVVPE LA ASAA+EA+TARLAAAHA+AAP I AV+PP +D VS+ A FS G +
Sbjct 1 MTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNAVEFSVHGSQ 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY 97
H + A+GVEELGR+GVGV ESGASY A DA AAA+Y
Sbjct 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASY 97
>gi|240168395|ref|ZP_04747054.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=104
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/90 (74%), Positives = 75/90 (84%), Gaps = 0/90 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTL VVPEGL A+AAVEAL+ARLAAAHA+AAP+IT VV PAADPVSL+TAAG SA GV
Sbjct 1 MTLWVVPEGLTGAAAAVEALSARLAAAHAAAAPLITGVVAPAADPVSLRTAAGLSACGVH 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGD 90
H + EGVEEL R+GVG+GE+G SY AGD
Sbjct 61 HVGIATEGVEELARSGVGIGEAGVSYTAGD 90
>gi|240173532|ref|ZP_04752190.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=108
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/101 (71%), Positives = 83/101 (83%), Gaps = 0/101 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
+TL VVPEGLA A+AAVEAL+ARLAAAHA+AAP+I+AVV P ADPVSL TAAGFSA G+E
Sbjct 5 VTLWVVPEGLAGAAAAVEALSARLAAAHAAAAPMISAVVAPXADPVSLSTAAGFSAGGIE 64
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATYGVVG 101
H V E VEEL R+G G+G +G SY AGD+AAA TYG+ G
Sbjct 65 HVGVATEAVEELTRSGAGLGTAGISYAAGDSAAALTYGLAG 105
>gi|254364274|ref|ZP_04980320.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|134149788|gb|EBA41833.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
Length=102
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/97 (68%), Positives = 76/97 (79%), Gaps = 0/97 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRVVPE LA ASAA+EA+TARLAAAHA+AAP I AV+PP +D VS+ FS G +
Sbjct 1 MTLRVVPESLAGASAAIEAVTARLAAAHAAAAPFIAAVIPPGSDSVSVCNTVEFSVHGSQ 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY 97
H + A+GVEELGR+GVGV ESGASY A DA AAA+Y
Sbjct 61 HVAMAAQGVEELGRSGVGVAESGASYAARDALAAASY 97
>gi|183985227|ref|YP_001853518.1| PE family protein, PE5_1 [Mycobacterium marinum M]
gi|183178553|gb|ACC43663.1| PE family protein, PE5_1 [Mycobacterium marinum M]
Length=103
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/86 (77%), Positives = 75/86 (88%), Gaps = 0/86 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
M LRV+PEGLA ASAAV ALTARLAAAHA AAP ITAV+PPAADPVS++ AAGFSA GVE
Sbjct 1 MMLRVIPEGLAGASAAVAALTARLAAAHAVAAPAITAVIPPAADPVSVRNAAGFSAVGVE 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASY 86
H+ + EG+EELGR+GVGVGE+G SY
Sbjct 61 HSAMATEGIEELGRSGVGVGEAGISY 86
>gi|212596236|gb|ACJ35562.1| PE1 [Mycobacterium intracellulare ATCC 13950]
Length=105
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/97 (71%), Positives = 79/97 (82%), Gaps = 0/97 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRV+PEGLAA SAAVEA+TA+LAAAHA+AAPV++AVVPPAADPVSL AA FS +G +
Sbjct 4 MTLRVLPEGLAATSAAVEAITAQLAAAHAAAAPVVSAVVPPAADPVSLGAAAVFSGRGSQ 63
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY 97
H A+GVE LGRAG+GV +G Y A DAA AATY
Sbjct 64 HTAAAAKGVEVLGRAGLGVSLAGVGYAAQDAADAATY 100
>gi|254821558|ref|ZP_05226559.1| PE family protein [Mycobacterium intracellulare ATCC 13950]
Length=102
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/97 (71%), Positives = 79/97 (82%), Gaps = 0/97 (0%)
Query 1 MTLRVVPEGLAAASAAVEALTARLAAAHASAAPVITAVVPPAADPVSLQTAAGFSAQGVE 60
MTLRV+PEGLAA SAAVEA+TA+LAAAHA+AAPV++AVVPPAADPVSL AA FS +G +
Sbjct 1 MTLRVLPEGLAATSAAVEAITAQLAAAHAAAAPVVSAVVPPAADPVSLGAAAVFSGRGSQ 60
Query 61 HAVVTAEGVEELGRAGVGVGESGASYLAGDAAAAATY 97
H A+GVE LGRAG+GV +G Y A DAA AATY
Sbjct 61 HTAAAAKGVEVLGRAGLGVSLAGVGYAAQDAADAATY 97
Lambda K H
0.311 0.124 0.334
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128294982110
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40