BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0286 Length=513 Score E Sequences producing significant alignments: (Bits) Value gi|15839672|ref|NP_334709.1| PPE family protein [Mycobacterium t... 990 0.0 gi|289752319|ref|ZP_06511697.1| PPE family protein [Mycobacteriu... 989 0.0 gi|339630361|ref|YP_004722003.1| PPE family protein [Mycobacteri... 988 0.0 gi|340625324|ref|YP_004743776.1| PPE family protein [Mycobacteri... 983 0.0 gi|148660052|ref|YP_001281575.1| PPE family protein [Mycobacteri... 958 0.0 gi|313657076|ref|ZP_07813956.1| PPE family protein [Mycobacteriu... 862 0.0 gi|339296993|gb|AEJ49103.1| PPE family protein [Mycobacterium tu... 725 0.0 gi|298523757|ref|ZP_07011166.1| ppe family protein [Mycobacteriu... 707 0.0 gi|323721322|gb|EGB30376.1| PPE family protein [Mycobacterium tu... 660 0.0 gi|306779127|ref|ZP_07417464.1| PPE family protein [Mycobacteriu... 647 0.0 gi|308370364|ref|ZP_07421235.2| PPE family protein [Mycobacteriu... 645 0.0 gi|308376353|ref|ZP_07438549.2| putative PPE family protein [Myc... 636 3e-180 gi|167967058|ref|ZP_02549335.1| PPE family protein [Mycobacteriu... 634 1e-179 gi|289748768|ref|ZP_06508146.1| PPE family protein [Mycobacteriu... 625 8e-177 gi|306966289|ref|ZP_07478950.1| putative PPE family protein [Myc... 624 2e-176 gi|308375119|ref|ZP_07442759.2| putative PPE family protein [Myc... 610 1e-172 gi|308395019|ref|ZP_07491878.2| putative PPE family protein [Myc... 600 2e-169 gi|289756351|ref|ZP_06515729.1| PPE family protein [Mycobacteriu... 500 2e-139 gi|307078212|ref|ZP_07487382.1| putative PPE family protein [Myc... 498 7e-139 gi|118616922|ref|YP_905254.1| PPE family protein [Mycobacterium ... 494 1e-137 gi|289748057|ref|ZP_06507435.1| PPE family protein [Mycobacteriu... 493 4e-137 gi|183980573|ref|YP_001848864.1| PPE family protein, PPE4 [Mycob... 479 7e-133 gi|342859230|ref|ZP_08715884.1| hypothetical protein MCOL_10138 ... 389 5e-106 gi|240173111|ref|ZP_04751769.1| PPE family protein [Mycobacteriu... 380 3e-103 gi|118468729|ref|YP_885030.1| PPE family protein [Mycobacterium ... 317 3e-84 gi|126432976|ref|YP_001068667.1| PPE family protein [Mycobacteri... 305 1e-80 gi|108797354|ref|YP_637551.1| PPE protein [Mycobacterium sp. MCS... 305 1e-80 gi|240168498|ref|ZP_04747157.1| PPE family protein, PPE4 [Mycoba... 301 1e-79 gi|306782914|ref|ZP_07421236.1| PPE family protein [Mycobacteriu... 301 1e-79 gi|289748769|ref|ZP_06508147.1| PPE family protein [Mycobacteriu... 298 1e-78 gi|333988934|ref|YP_004521548.1| PPE family protein [Mycobacteri... 290 4e-76 gi|308395076|ref|ZP_07669329.1| hypothetical protein TMLG_03609 ... 286 4e-75 gi|296167589|ref|ZP_06849914.1| PPE family protein [Mycobacteriu... 285 9e-75 gi|240172392|ref|ZP_04751051.1| PPE protein [Mycobacterium kansa... 285 1e-74 gi|308376354|ref|ZP_07438550.2| hypothetical protein TMHG_03296 ... 281 3e-73 gi|183981440|ref|YP_001849731.1| PPE family protein [Mycobacteri... 278 1e-72 gi|120401440|ref|YP_951269.1| PPE protein [Mycobacterium vanbaal... 264 2e-68 gi|289748258|ref|ZP_06507636.1| PPE family protein [Mycobacteriu... 252 9e-65 gi|340628712|ref|YP_004747164.1| ppe family protein [Mycobacteri... 251 2e-64 gi|289445339|ref|ZP_06435083.1| PPE family protein [Mycobacteriu... 250 4e-64 gi|289441176|ref|ZP_06430920.1| PPE family protein [Mycobacteriu... 250 5e-64 gi|315442101|ref|YP_004074980.1| PPE-repeat containing protein [... 247 3e-63 gi|145220929|ref|YP_001131607.1| PPE protein [Mycobacterium gilv... 246 9e-63 gi|169631856|ref|YP_001705505.1| PPE family protein [Mycobacteri... 245 2e-62 gi|169629316|ref|YP_001702965.1| PPE family protein [Mycobacteri... 244 2e-62 gi|169629340|ref|YP_001702989.1| PPE family protein [Mycobacteri... 243 8e-62 gi|169627152|ref|YP_001700801.1| PPE family protein [Mycobacteri... 242 1e-61 gi|183980812|ref|YP_001849103.1| PPE family protein [Mycobacteri... 242 1e-61 gi|169627772|ref|YP_001701421.1| PPE-family protein [Mycobacteri... 242 1e-61 gi|240171483|ref|ZP_04750142.1| PPE-family protein [Mycobacteriu... 236 6e-60 >gi|15839672|ref|NP_334709.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|31791465|ref|NP_853958.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|57116716|ref|YP_177711.1| PPE family protein [Mycobacterium tuberculosis H37Rv] 44 more sequence titles Length=513 Score = 990 bits (2560), Expect = 0.0, Method: Compositional matrix adjust. Identities = 513/513 (100%), Positives = 513/513 (100%), Gaps = 0/513 (0%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW Sbjct 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH Sbjct 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP Sbjct 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 Query 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN Sbjct 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 Query 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA Sbjct 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 Query 301 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASF 360 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASF Sbjct 301 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASF 360 Query 361 AYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDE 420 AYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDE Sbjct 361 AYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDE 420 Query 421 FLDMDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRM 480 FLDMDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRM Sbjct 421 FLDMDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRM 480 Query 481 PMVPGTWEQGSNEPEAPDGSGRGGGDGLPHDSK 513 PMVPGTWEQGSNEPEAPDGSGRGGGDGLPHDSK Sbjct 481 PMVPGTWEQGSNEPEAPDGSGRGGGDGLPHDSK 513 >gi|289752319|ref|ZP_06511697.1| PPE family protein [Mycobacterium tuberculosis EAS054] gi|289692906|gb|EFD60335.1| PPE family protein [Mycobacterium tuberculosis EAS054] Length=513 Score = 989 bits (2557), Expect = 0.0, Method: Compositional matrix adjust. Identities = 512/513 (99%), Positives = 512/513 (99%), Gaps = 0/513 (0%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW Sbjct 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH Sbjct 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP Sbjct 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 Query 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN Sbjct 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 Query 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA Sbjct 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 Query 301 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASF 360 VIPPASTPLAAAA AAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASF Sbjct 301 VIPPASTPLAAAAAAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASF 360 Query 361 AYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDE 420 AYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDE Sbjct 361 AYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDE 420 Query 421 FLDMDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRM 480 FLDMDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRM Sbjct 421 FLDMDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRM 480 Query 481 PMVPGTWEQGSNEPEAPDGSGRGGGDGLPHDSK 513 PMVPGTWEQGSNEPEAPDGSGRGGGDGLPHDSK Sbjct 481 PMVPGTWEQGSNEPEAPDGSGRGGGDGLPHDSK 513 >gi|339630361|ref|YP_004722003.1| PPE family protein [Mycobacterium africanum GM041182] gi|339329717|emb|CCC25360.1| PPE family protein [Mycobacterium africanum GM041182] Length=513 Score = 988 bits (2555), Expect = 0.0, Method: Compositional matrix adjust. Identities = 512/513 (99%), Positives = 512/513 (99%), Gaps = 0/513 (0%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW Sbjct 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH Sbjct 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP Sbjct 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 Query 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN Sbjct 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 Query 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA Sbjct 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 Query 301 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASF 360 VIPPAST LAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASF Sbjct 301 VIPPASTQLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASF 360 Query 361 AYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDE 420 AYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDE Sbjct 361 AYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDE 420 Query 421 FLDMDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRM 480 FLDMDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRM Sbjct 421 FLDMDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRM 480 Query 481 PMVPGTWEQGSNEPEAPDGSGRGGGDGLPHDSK 513 PMVPGTWEQGSNEPEAPDGSGRGGGDGLPHDSK Sbjct 481 PMVPGTWEQGSNEPEAPDGSGRGGGDGLPHDSK 513 >gi|340625324|ref|YP_004743776.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340003514|emb|CCC42635.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=513 Score = 983 bits (2540), Expect = 0.0, Method: Compositional matrix adjust. Identities = 509/513 (99%), Positives = 510/513 (99%), Gaps = 0/513 (0%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW Sbjct 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH Sbjct 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP Sbjct 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 Query 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN Sbjct 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 Query 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA Sbjct 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 Query 301 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASF 360 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAG+A PAAGAAPSAGAAPAPAAPATASF Sbjct 301 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGSAAPAAGAAPSAGAAPAPAAPATASF 360 Query 361 AYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDE 420 AYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATR QSRARRRRRSELRDYGDE Sbjct 361 AYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRAQSRARRRRRSELRDYGDE 420 Query 421 FLDMDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRM 480 FLDMDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPR Sbjct 421 FLDMDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRT 480 Query 481 PMVPGTWEQGSNEPEAPDGSGRGGGDGLPHDSK 513 PMVPGTWEQGSNEPEAPDGSGRGGGDGLPHDSK Sbjct 481 PMVPGTWEQGSNEPEAPDGSGRGGGDGLPHDSK 513 >gi|148660052|ref|YP_001281575.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|148504204|gb|ABQ72013.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=497 Score = 958 bits (2476), Expect = 0.0, Method: Compositional matrix adjust. Identities = 496/497 (99%), Positives = 497/497 (100%), Gaps = 0/497 (0%) Query 17 LLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAWQGPSAEWYVAAHLPYV 76 +LSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAWQGPSAEWYVAAHLPYV Sbjct 1 MLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAWQGPSAEWYVAAHLPYV 60 Query 77 AWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIHTVLVATNFFGINTIPI 136 AWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIHTVLVATNFFGINTIPI Sbjct 61 AWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIHTVLVATNFFGINTIPI 120 Query 137 TLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNPGGGAASTVGAVNPWQW 196 TLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNPGGGAASTVGAVNPWQW Sbjct 121 TLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNPGGGAASTVGAVNPWQW 180 Query 197 LLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTNPIQALITYGPLLFALG 256 LLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTNPIQALITYGPLLFALG Sbjct 181 LLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTNPIQALITYGPLLFALG 240 Query 257 YQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPAVIPPASTPLAAAAVAA 316 YQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPAVIPPASTPLAAAAVAA Sbjct 241 YQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPAVIPPASTPLAAAAVAA 300 Query 317 GSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASFAYAVGGSGDWGPSLGP 376 GSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASFAYAVGGSGDWGPSLGP Sbjct 301 GSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASFAYAVGGSGDWGPSLGP 360 Query 377 TVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFLDMDSDSGFGPSTGD 436 TVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFLDMDSDSGFGPSTGD Sbjct 361 TVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFLDMDSDSGFGPSTGD 420 Query 437 HGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWEQGSNEPEA 496 HGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWEQGSNEPEA Sbjct 421 HGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWEQGSNEPEA 480 Query 497 PDGSGRGGGDGLPHDSK 513 PDGSGRGGGDGLPHDSK Sbjct 481 PDGSGRGGGDGLPHDSK 497 >gi|313657076|ref|ZP_07813956.1| PPE family protein [Mycobacterium tuberculosis KZN V2475] gi|339293345|gb|AEJ45456.1| PPE family protein [Mycobacterium tuberculosis CCDC5079] Length=445 Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust. Identities = 444/445 (99%), Positives = 445/445 (100%), Gaps = 0/445 (0%) Query 69 VAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIHTVLVATNF 128 +AAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIHTVLVATNF Sbjct 1 MAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIHTVLVATNF 60 Query 129 FGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNPGGGAASTV 188 FGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNPGGGAASTV Sbjct 61 FGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNPGGGAASTV 120 Query 189 GAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTNPIQALITY 248 GAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTNPIQALITY Sbjct 121 GAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTNPIQALITY 180 Query 249 GPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPAVIPPASTP 308 GPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPAVIPPASTP Sbjct 181 GPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPAVIPPASTP 240 Query 309 LAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASFAYAVGGSG 368 LAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASFAYAVGGSG Sbjct 241 LAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASFAYAVGGSG 300 Query 369 DWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFLDMDSDS 428 DWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFLDMDSDS Sbjct 301 DWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFLDMDSDS 360 Query 429 GFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWE 488 GFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWE Sbjct 361 GFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWE 420 Query 489 QGSNEPEAPDGSGRGGGDGLPHDSK 513 QGSNEPEAPDGSGRGGGDGLPHDSK Sbjct 421 QGSNEPEAPDGSGRGGGDGLPHDSK 445 >gi|339296993|gb|AEJ49103.1| PPE family protein [Mycobacterium tuberculosis CCDC5180] Length=403 Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust. Identities = 381/397 (96%), Positives = 385/397 (97%), Gaps = 4/397 (1%) Query 69 VAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIHTVLVATNF 128 +AAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIHTVLVATNF Sbjct 1 MAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIHTVLVATNF 60 Query 129 FGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNPGGGAASTV 188 FGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNPGGGAASTV Sbjct 61 FGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNPGGGAASTV 120 Query 189 GAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTNPIQALITY 248 GAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTNPIQALITY Sbjct 121 GAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTNPIQALITY 180 Query 249 GPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPAVIPPASTP 308 GPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPAVIPPASTP Sbjct 181 GPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPAVIPPASTP 240 Query 309 LAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASFAYAVGGSG 368 LAAAAVAAGSVWPAVSMAVTG GTAGAATPAAGAAPSAGAAPAPAAPATASFAYAVGGSG Sbjct 241 LAAAAVAAGSVWPAVSMAVTGPGTAGAATPAAGAAPSAGAAPAPAAPATASFAYAVGGSG 300 Query 369 DWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFLDMDSDS 428 DWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFLDMDSDS Sbjct 301 DWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFLDMDSDS 360 Query 429 GFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVG 465 GFGPSTGDHGAQASERGAG+ G ++R R G Sbjct 361 GFGPSTGDHGAQASERGAGSAGI----RRDRNQRTPG 393 >gi|298523757|ref|ZP_07011166.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A] gi|298493551|gb|EFI28845.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A] Length=379 Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/378 (99%), Positives = 376/378 (99%), Gaps = 0/378 (0%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW Sbjct 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH Sbjct 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP Sbjct 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 Query 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN Sbjct 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 Query 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA Sbjct 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 Query 301 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASF 360 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASF Sbjct 301 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASF 360 Query 361 AYAVGGSGDWGPSLGPTV 378 AYAVGGSGDWG SL PTV Sbjct 361 AYAVGGSGDWGLSLRPTV 378 >gi|323721322|gb|EGB30376.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=348 Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW Sbjct 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH Sbjct 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP Sbjct 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 Query 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN Sbjct 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 Query 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA Sbjct 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 Query 301 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGA 348 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGA Sbjct 301 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGA 348 >gi|306779127|ref|ZP_07417464.1| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308327904|gb|EFP16755.1| PPE family protein [Mycobacterium tuberculosis SUMu002] Length=339 Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/339 (100%), Positives = 339/339 (100%), Gaps = 0/339 (0%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW Sbjct 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH Sbjct 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP Sbjct 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 Query 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN Sbjct 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 Query 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA Sbjct 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 Query 301 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPA 339 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPA Sbjct 301 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPA 339 >gi|308370364|ref|ZP_07421235.2| PPE family protein [Mycobacterium tuberculosis SUMu003] gi|308332261|gb|EFP21112.1| PPE family protein [Mycobacterium tuberculosis SUMu003] Length=338 Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/338 (100%), Positives = 338/338 (100%), Gaps = 0/338 (0%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW Sbjct 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH Sbjct 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP Sbjct 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 Query 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN Sbjct 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 Query 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA Sbjct 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 Query 301 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATP 338 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATP Sbjct 301 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATP 338 >gi|308376353|ref|ZP_07438549.2| putative PPE family protein [Mycobacterium tuberculosis SUMu008] gi|308351359|gb|EFP40210.1| putative PPE family protein [Mycobacterium tuberculosis SUMu008] Length=332 Score = 636 bits (1640), Expect = 3e-180, Method: Compositional matrix adjust. Identities = 332/332 (100%), Positives = 332/332 (100%), Gaps = 0/332 (0%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW Sbjct 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH Sbjct 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP Sbjct 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 Query 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN Sbjct 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 Query 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA Sbjct 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 Query 301 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGT 332 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGT Sbjct 301 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGT 332 >gi|167967058|ref|ZP_02549335.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=335 Score = 634 bits (1635), Expect = 1e-179, Method: Compositional matrix adjust. Identities = 331/334 (99%), Positives = 331/334 (99%), Gaps = 0/334 (0%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW Sbjct 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH Sbjct 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP Sbjct 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 Query 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN Sbjct 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 Query 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA Sbjct 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 Query 301 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAG 334 VIPPASTPLAAAAVAAGSVWPAVSM V GAGT G Sbjct 301 VIPPASTPLAAAAVAAGSVWPAVSMTVMGAGTLG 334 >gi|289748768|ref|ZP_06508146.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289689355|gb|EFD56784.1| PPE family protein [Mycobacterium tuberculosis T92] Length=342 Score = 625 bits (1611), Expect = 8e-177, Method: Compositional matrix adjust. Identities = 324/328 (99%), Positives = 325/328 (99%), Gaps = 0/328 (0%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW Sbjct 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH Sbjct 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP Sbjct 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 Query 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN Sbjct 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 Query 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA Sbjct 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 Query 301 VIPPASTPLAAAAVAAGSVWPAVSMAVT 328 VIPPASTPLAAAAVAAGSVWPA+ M T Sbjct 301 VIPPASTPLAAAAVAAGSVWPAIIMTET 328 >gi|306966289|ref|ZP_07478950.1| putative PPE family protein [Mycobacterium tuberculosis SUMu009] gi|308355991|gb|EFP44842.1| putative PPE family protein [Mycobacterium tuberculosis SUMu009] Length=325 Score = 624 bits (1608), Expect = 2e-176, Method: Compositional matrix adjust. Identities = 325/325 (100%), Positives = 325/325 (100%), Gaps = 0/325 (0%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW Sbjct 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH Sbjct 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP Sbjct 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 Query 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN Sbjct 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 Query 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA Sbjct 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 Query 301 VIPPASTPLAAAAVAAGSVWPAVSM 325 VIPPASTPLAAAAVAAGSVWPAVSM Sbjct 301 VIPPASTPLAAAAVAAGSVWPAVSM 325 >gi|308375119|ref|ZP_07442759.2| putative PPE family protein [Mycobacterium tuberculosis SUMu007] gi|308347415|gb|EFP36266.1| putative PPE family protein [Mycobacterium tuberculosis SUMu007] Length=322 Score = 610 bits (1574), Expect = 1e-172, Method: Compositional matrix adjust. Identities = 318/318 (100%), Positives = 318/318 (100%), Gaps = 0/318 (0%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW Sbjct 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH Sbjct 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP Sbjct 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 Query 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN Sbjct 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 Query 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA Sbjct 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 Query 301 VIPPASTPLAAAAVAAGS 318 VIPPASTPLAAAAVAAGS Sbjct 301 VIPPASTPLAAAAVAAGS 318 >gi|308395019|ref|ZP_07491878.2| putative PPE family protein [Mycobacterium tuberculosis SUMu012] gi|308367517|gb|EFP56368.1| putative PPE family protein [Mycobacterium tuberculosis SUMu012] Length=311 Score = 600 bits (1548), Expect = 2e-169, Method: Compositional matrix adjust. Identities = 311/311 (100%), Positives = 311/311 (100%), Gaps = 0/311 (0%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW Sbjct 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH Sbjct 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP Sbjct 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 Query 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN Sbjct 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 Query 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA Sbjct 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 Query 301 VIPPASTPLAA 311 VIPPASTPLAA Sbjct 301 VIPPASTPLAA 311 >gi|289756351|ref|ZP_06515729.1| PPE family protein [Mycobacterium tuberculosis T85] gi|289711915|gb|EFD75927.1| PPE family protein [Mycobacterium tuberculosis T85] Length=365 Score = 500 bits (1288), Expect = 2e-139, Method: Compositional matrix adjust. Identities = 349/359 (98%), Positives = 351/359 (98%), Gaps = 0/359 (0%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW Sbjct 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH Sbjct 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP Sbjct 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 Query 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN Sbjct 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 Query 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA Sbjct 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 Query 301 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATAS 359 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPA A PSAGAA P + A +S Sbjct 301 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAVVAVPSAGAALVPTSLAISS 359 >gi|307078212|ref|ZP_07487382.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308363847|gb|EFP52698.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011] Length=342 Score = 498 bits (1283), Expect = 7e-139, Method: Compositional matrix adjust. Identities = 331/338 (98%), Positives = 331/338 (98%), Gaps = 0/338 (0%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW Sbjct 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH Sbjct 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP Sbjct 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 Query 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN Sbjct 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 Query 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA Sbjct 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 Query 301 VIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATP 338 VIPPASTPLAAAAVAAGSVWPAVSMAVTG G P Sbjct 301 VIPPASTPLAAAAVAAGSVWPAVSMAVTGRAPLGLRRP 338 >gi|118616922|ref|YP_905254.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118569032|gb|ABL03783.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=517 Score = 494 bits (1273), Expect = 1e-137, Method: Compositional matrix adjust. Identities = 349/501 (70%), Positives = 391/501 (79%), Gaps = 15/501 (2%) Query 2 AAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAWQ 61 A PIW+ASPPEVHSA+LS+GPGP SL+AAA WS LSAEYA TAAELS +L AV AWQ Sbjct 5 AGPIWIASPPEVHSAMLSSGPGPASLLAAAGVWSALSAEYALTAAELSEVLAAVQAGAWQ 64 Query 62 GPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIHT 121 GPS YVAAHLPYVAWL QASAD AG AA+HEAAA AY+ ALAAMPTL EL ANH +H Sbjct 65 GPSGFQYVAAHLPYVAWLLQASADGAGKAAEHEAAAVAYSGALAAMPTLTELGANHALHG 124 Query 122 VLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNPG 181 VLVATNFFG+N IPI LNEADYVRMW+QAA MGLYQA +GAALASAPRT P P V+NPG Sbjct 125 VLVATNFFGLNAIPIALNEADYVRMWVQAATTMGLYQATAGAALASAPRTGPPPKVVNPG 184 Query 182 GGAASTVGAV--------------NPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPI 227 GG + + A +PWQ L LLQ LWNAYTGF WM LIW+FLQDPI Sbjct 185 GGQVAHLAADAARAQSGAAAAGGSDPWQLLWQLLQYLWNAYTGFNTWMFDLIWEFLQDPI 244 Query 228 GNSIKIIIAFLTNPIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGL 287 GN+IKIIIAFLTNP+QA+ITYGPLLFAL YQIFFNLVGWPTW +ILSSPFLLPA LGL L Sbjct 245 GNTIKIIIAFLTNPLQAIITYGPLLFALSYQIFFNLVGWPTWALILSSPFLLPAALGLAL 304 Query 288 AAIAFLPIVLAPAVIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAG 347 +AIAF PI +A A +P A+ PLAAAAV A SV+PA S+A G G+AGA AGA Sbjct 305 SAIAFTPIQIA-AEVPAAAAPLAAAAVTAKSVFPAASLASPGTGSAGAPASGAGAGAPGT 363 Query 348 AAPAPAAPATASFAYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRAR 407 A P P APA ASF YAVGGSGDWGPSLGPTVGGR G KAPA T+PAA AAAA+R +R+R Sbjct 364 APPGPGAPAPASFLYAVGGSGDWGPSLGPTVGGRSGAKAPAVTIPAAGAAAASRASARSR 423 Query 408 RRRRSELRDYGDEFLDMDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLT 467 RRRR+E+RDYGDEFLDMD++ GP+ D A+ASERGAG GFAGT + E ++A GLT Sbjct 424 RRRRTEMRDYGDEFLDMDANGVTGPAATDDAARASERGAGQFGFAGTVSTEAVLQAAGLT 483 Query 468 ALAGDEFGNGPRMPMVPGTWE 488 LA DEFGNGPRMPMVPG+W+ Sbjct 484 ELAVDEFGNGPRMPMVPGSWD 504 >gi|289748057|ref|ZP_06507435.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289688585|gb|EFD56073.1| PPE family protein [Mycobacterium tuberculosis 02_1987] Length=368 Score = 493 bits (1268), Expect = 4e-137, Method: Compositional matrix adjust. Identities = 327/327 (100%), Positives = 327/327 (100%), Gaps = 0/327 (0%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW Sbjct 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH Sbjct 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP Sbjct 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 Query 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN Sbjct 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 Query 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA Sbjct 241 PIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPA 300 Query 301 VIPPASTPLAAAAVAAGSVWPAVSMAV 327 VIPPASTPLAAAAVAAGSVWPAVSMAV Sbjct 301 VIPPASTPLAAAAVAAGSVWPAVSMAV 327 >gi|183980573|ref|YP_001848864.1| PPE family protein, PPE4 [Mycobacterium marinum M] gi|183173899|gb|ACC39009.1| PPE family protein, PPE4 [Mycobacterium marinum M] Length=517 Score = 479 bits (1232), Expect = 7e-133, Method: Compositional matrix adjust. Identities = 351/501 (71%), Positives = 393/501 (79%), Gaps = 15/501 (2%) Query 2 AAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAWQ 61 A PIW+ASPPEVHSA+LS+GPGP SL+AAA WS LSAEYA TAAELS +L AV AWQ Sbjct 5 AGPIWIASPPEVHSAMLSSGPGPASLLAAAGVWSALSAEYALTAAELSEVLAAVQAGAWQ 64 Query 62 GPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIHT 121 GPS YVAAHLPYVAWL QASAD AG AA+HEAAA AY+ ALAAMPTL EL ANH +H Sbjct 65 GPSGFQYVAAHLPYVAWLLQASADGAGKAAEHEAAAVAYSGALAAMPTLTELGANHALHG 124 Query 122 VLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNPG 181 VLVATNFFG+N IPI LNEADYVRMW+QAA MGLYQA +GAALASAPRT P P V+NPG Sbjct 125 VLVATNFFGLNAIPIALNEADYVRMWVQAATTMGLYQATAGAALASAPRTGPPPKVVNPG 184 Query 182 GGAASTV--------------GAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPI 227 GG + + G +PWQ L LLQ LWNAYTGF WM LIW+FLQDPI Sbjct 185 GGQVAHLAADAAQAQSGAAAAGGSDPWQLLWQLLQYLWNAYTGFNTWMFDLIWEFLQDPI 244 Query 228 GNSIKIIIAFLTNPIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGL 287 GN+IKIIIAFLTNP+QA+ITYGPLLFAL YQIFFNLVGWPTW +ILSSPFLLPA LGL L Sbjct 245 GNTIKIIIAFLTNPLQAIITYGPLLFALSYQIFFNLVGWPTWALILSSPFLLPAALGLAL 304 Query 288 AAIAFLPIVLAPAVIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAG 347 +AIAF PI +A A +P A+ PLAAAAV A SV+PA S+A G G+AGA AGA Sbjct 305 SAIAFTPIQIA-AEVPAAAAPLAAAAVTAKSVFPAASLASPGTGSAGAPASGAGAGAPGS 363 Query 348 AAPAPAAPATASFAYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRAR 407 A P PAAPA ASF YAVGGSGDWGPSLGPTVGGR G KAPAAT+PAA AAAA+R +R+R Sbjct 364 APPGPAAPAPASFLYAVGGSGDWGPSLGPTVGGRSGAKAPAATIPAAGAAAASRASARSR 423 Query 408 RRRRSELRDYGDEFLDMDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLT 467 RRRR+E+RDYGDEFLDMD++ GP+ D A+ASERGAG GFAGT + E ++A GLT Sbjct 424 RRRRTEMRDYGDEFLDMDANGVTGPAATDDAARASERGAGQFGFAGTVSTEAVLQAAGLT 483 Query 468 ALAGDEFGNGPRMPMVPGTWE 488 LA DEFGNGPRMPMVPG+W+ Sbjct 484 ELAVDEFGNGPRMPMVPGSWD 504 >gi|342859230|ref|ZP_08715884.1| hypothetical protein MCOL_10138 [Mycobacterium colombiense CECT 3035] gi|342133471|gb|EGT86674.1| hypothetical protein MCOL_10138 [Mycobacterium colombiense CECT 3035] Length=488 Score = 389 bits (1000), Expect = 5e-106, Method: Compositional matrix adjust. Identities = 283/505 (57%), Positives = 334/505 (67%), Gaps = 24/505 (4%) Query 7 MASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAWQGPSAE 66 MASPPEVHSALLS GPGPG L+AAA AW+ LS +YAS AAELSGLLG AW+GPSAE Sbjct 1 MASPPEVHSALLSAGPGPGPLLAAAGAWTSLSTQYASAAAELSGLLGEAQAGAWEGPSAE 60 Query 67 WYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIHTVLVAT 126 YVAAHLPY+AWL QAS D+AGAAAQ E AA AYT ALAAMPTLAELA NH +H VLV T Sbjct 61 QYVAAHLPYLAWLQQASVDSAGAAAQQEVAATAYTAALAAMPTLAELATNHTVHAVLVGT 120 Query 127 NFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNPGG---G 183 NFFGINTIPI +NEADY RMW+QAA MG YQA SG+ALA+APRT+ AP ++NPGG Sbjct 121 NFFGINTIPIAVNEADYARMWVQAATTMGTYQAVSGSALAAAPRTMAAPAIVNPGGQINS 180 Query 184 AASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTNPIQ 243 AS +P W +QQL + F+ Q I Q LQ+ F +N Sbjct 181 LASNATQNSPGDWWQNFIQQLSKFFQDFF----QNIQQMLQN-----------FFSNLPA 225 Query 244 ALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPAVIP 303 L GPLLF + YQ+FFN VGWPTWG IL++PFL+P LG+GL+++ P+ AP P Sbjct 226 FLAANGPLLFFVAYQVFFNAVGWPTWGAILTAPFLIPLLLGIGLSSLLTTPVEAAPDAAP 285 Query 304 PASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASFAYA 363 P A + S+ PAV++A T A AGA A S A A A ++FAY Sbjct 286 TVVAP-ALTSTKPPSMLPAVALAPTVATPAGAPATTVAAG-SGAPAAPAPAAAASNFAYL 343 Query 364 VGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFLD 423 + GD +GPT+GGRGG KAPAAT+PAA AAAA+R +SRARRRRR L D+ DEF D Sbjct 344 IAMGGDPDAGVGPTLGGRGGAKAPAATIPAAGAAAASRAESRARRRRRGALHDHADEFAD 403 Query 424 MDSDSGFGPSTGDH----GAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPR 479 MDSD G P GD A AS +GAGTLGFAGT +++ +A GLT LA D+FG GPR Sbjct 404 MDSDFGVPPDFGDEEELAAAVASAQGAGTLGFAGTTQRQKAFQAAGLTKLADDDFGGGPR 463 Query 480 MPMVPGTWEQGSNEPEAPDGSGRGG 504 MPMVPGTWE + P G+GG Sbjct 464 MPMVPGTWEHEAGNGAGPIEPGKGG 488 >gi|240173111|ref|ZP_04751769.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=387 Score = 380 bits (976), Expect = 3e-103, Method: Compositional matrix adjust. Identities = 271/381 (72%), Positives = 298/381 (79%), Gaps = 13/381 (3%) Query 4 PIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAWQGP 63 PIW+ASPPEVHSALLS+GPGP SL+AAA AW+ LSAEYAS AAELSG+L AV AWQGP Sbjct 7 PIWIASPPEVHSALLSSGPGPASLLAAAAAWNLLSAEYASAAAELSGILDAVQAGAWQGP 66 Query 64 SAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIHTVL 123 SA+ YVAAHLPYVAWL QASAD+A A QHEAAAAAYT A A MPTLAELAANHVIH +L Sbjct 67 SAQQYVAAHLPYVAWLMQASADSAAVATQHEAAAAAYTAASATMPTLAELAANHVIHGIL 126 Query 124 VATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNPGGG 183 VATNFFGINTIPI LNEADY+RMWLQAAA MGLYQAA+GAALASAPRT PAP ++NPGG Sbjct 127 VATNFFGINTIPIALNEADYLRMWLQAAATMGLYQAAAGAALASAPRTAPAPAIVNPGGE 186 Query 184 AASTV-----------GAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIK 232 A+ + NPWQ+L +LQ +WNAYTGFYGWM + I FLQDPIGNSIK Sbjct 187 PAAGMVANAAQAQAVAATFNPWQFLWQVLQDMWNAYTGFYGWMFKEIATFLQDPIGNSIK 246 Query 233 IIIAFLTNPIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLA--AI 290 IIIAFLTNP+ ALITYGPLLFALGYQ+FFNLVGWPTWGM+LSSPFL+PAGL LGL+ A Sbjct 247 IIIAFLTNPVAALITYGPLLFALGYQVFFNLVGWPTWGMVLSSPFLVPAGLSLGLSAIAF 306 Query 291 AFLPIVLAPAVIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAP 350 A L PA+ A AVAA S WPAVS+A T +G AG + GA SAGA P Sbjct 307 AALAPAEIAVAAAPAAGLPLAGAVAAASPWPAVSLASTASGLAGPPSTPPGAGASAGAVP 366 Query 351 APAAPATASFAYAVGGSGDWG 371 APAAPA ASFAY VGG DWG Sbjct 367 APAAPAPASFAYLVGGLDDWG 387 >gi|118468729|ref|YP_885030.1| PPE family protein [Mycobacterium smegmatis str. MC2 155] gi|118170016|gb|ABK70912.1| ppe family protein [Mycobacterium smegmatis str. MC2 155] Length=523 Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 251/535 (47%), Positives = 319/535 (60%), Gaps = 46/535 (8%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 M APIWMA PPEVHS+LLS+GPGPGSL+AAA AW LSAEYA+ AAEL+ +L AV +W Sbjct 1 MTAPIWMALPPEVHSSLLSSGPGPGSLLAAAGAWQSLSAEYAAAAAELTSVLSAVQAGSW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 +GPS+E YVAAH PY+ WL Q SA++A AA QHE AAAAY+TALA MPT+AELA NH +H Sbjct 61 EGPSSEQYVAAHAPYLQWLAQQSANSAAAAVQHETAAAAYSTALATMPTMAELALNHTMH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 VLVATNFFGINTIPI LNEADYVRMW+QAA M YQA SGAA+A+AP + PAP ++ P Sbjct 121 GVLVATNFFGINTIPIALNEADYVRMWIQAATTMSTYQAVSGAAVAAAPVSAPAPFLLKP 180 Query 181 GGGAASTVGAVNPWQWLLALLQQL----------------------WNAY-TGFYGWMLQ 217 G G A + A +QQ+ N Y G G Q Sbjct 181 GVGEAGSASAS---------VQQMSAQATAAESGSSLDLSSIISDLLNQYLQGVPGG--Q 229 Query 218 LIWQFLQDPIGNSIKIIIAFLTNPIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPF 277 I FL+DP+GN +++ F+TNP AL T+ P LF + YQ+FFNLVGWPTWGMI +SPF Sbjct 230 AILDFLKDPLGNLGRLLTDFMTNPAGALATWWPFLFGVAYQVFFNLVGWPTWGMIFASPF 289 Query 278 LLPAGLGLGLAAIAFL-PIVLAPAVIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAA 336 L+PA LG+ + L VL V PA AA +++ ++ AG G+A Sbjct 290 LIPALAALGITGLVLLIDHVLNNPVDVPAEDEAPQEVAAAPRTDQPLAVGISPAGVPGSA 349 Query 337 TPAAGAAPSAGAAPAPAAPATAS--FAYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAA 394 AA AP+ A A+ YAV D G PT+G + + APA+ VPAA Sbjct 350 ATAAAPAPAPAGTTVAAPAPAAATFVPYAVANR-DPGEGFTPTLGNKSQVAAPASGVPAA 408 Query 395 ----AAAAATRGQSRARRRRRSELRDYGDEFLDMDSDSGFGPSTGDHGAQASERGAGTLG 450 AA+ A+R + R ++ + E R Y D ++D + + +ASERG+ +G Sbjct 409 ASGVAASLASRRKRRRKKGAQIEERGYADAYMDYEEPDEDPAPQPEPRVRASERGSDAMG 468 Query 451 FAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWEQGSN---EPEAPDGSGR 502 F GT T+ V A GLT L GD F + P PM+PGTW+ N P+ P+G R Sbjct 469 FTGTVTR-HDVTAAGLTTLTGDTFDDRPVTPMLPGTWDGDENPAPSPDDPEGGPR 522 >gi|126432976|ref|YP_001068667.1| PPE family protein [Mycobacterium sp. JLS] gi|126232776|gb|ABN96176.1| PPE protein [Mycobacterium sp. JLS] Length=525 Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 269/530 (51%), Positives = 321/530 (61%), Gaps = 34/530 (6%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 M PIWMA PPEVHSALLS+GPGPGSL+AAA AW LSAEYAS AAEL+G+LG+V AW Sbjct 1 MVPPIWMALPPEVHSALLSSGPGPGSLLAAAGAWQSLSAEYASAAAELTGILGSVQAGAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 +GPSAE YVAAH PY+AWL QASA++A AAQHE AAAAYTTALA MPTL ELAANH H Sbjct 61 EGPSAEQYVAAHTPYLAWLAQASANSAATAAQHETAAAAYTTALATMPTLGELAANHATH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 VL+ATNF GINTIPI +NEADYVRMW+QAA M YQA +GAA+A+AP T PAP ++ P Sbjct 121 AVLLATNFLGINTIPIAVNEADYVRMWIQAATSMSTYQAVAGAAVAAAPTTAPAPYLLAP 180 Query 181 GGG-----------------AASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFL 223 G G A+ + A+N + LL+Q + G Q I FL Sbjct 181 GVGEAGQAMASVQQLGAQAQASESGSALNISDSINQLLEQYLQSAPGG-----QEIIDFL 235 Query 224 QDPIGNSIKIIIAFLTNPIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGL 283 +DP+GN +I F+TNP AL+T+GPLL A+ YQ+F NLVGWPTW MI +SPFLL A + Sbjct 236 RDPLGNLQTLINDFMTNPSAALVTWGPLLSAVAYQVFTNLVGWPTWAMIFASPFLLAALI 295 Query 284 GLGLAAIAFLPIVLAPAVI-PPAST---PLAAAAVAAGSVWPAVSMAVTGAGTAGAATPA 339 LG+A + + L P + PPA A A V P + GA PA Sbjct 296 PLGIAGLVLIIDALKPELTQPPAEQTEPAPAPAPRPDQQVLPVAGVPAPGAPATPGTAPA 355 Query 340 AGAAPSAGAAPAPAAPATASFAYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAA 399 +A + A AA A YAV G GD G PTV G KAPA +PAAAAAAA Sbjct 356 GSSAAAPAAPAPAAAAAAPLVPYAVRG-GDPGEGFTPTVRDSTGAKAPAGDIPAAAAAAA 414 Query 400 TRGQSRARRRRRSEL-----RDYGDEFLDMDSDSGFGPSTGDHGAQASERGAGTLGFAGT 454 + R+RRR ++ R Y D ++D + D P A AS RGAG +GF GT Sbjct 415 AASAAERRKRRRRKITEVKGRGYADAYMDYEDDPDEPPVVEPRVA-ASSRGAGPMGFTGT 473 Query 455 ATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWEQGSNEPEAPDGSGRGG 504 A RA GLT L+ D FG GP PM+PGTW S EP+ P GG Sbjct 474 APGAADARATGLTTLSPDAFGTGPVSPMLPGTWNPDS-EPDQPAEGQEGG 522 >gi|108797354|ref|YP_637551.1| PPE protein [Mycobacterium sp. MCS] gi|119866439|ref|YP_936391.1| PPE protein [Mycobacterium sp. KMS] gi|108767773|gb|ABG06495.1| PPE protein [Mycobacterium sp. MCS] gi|119692528|gb|ABL89601.1| PPE protein [Mycobacterium sp. KMS] Length=525 Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 269/530 (51%), Positives = 321/530 (61%), Gaps = 34/530 (6%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 M PIWMA PPEVHSALLS+GPGPGSL+AAA AW LSAEYAS AAEL+G+LG+V AW Sbjct 1 MVPPIWMALPPEVHSALLSSGPGPGSLLAAAGAWQSLSAEYASAAAELTGILGSVQAGAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 +GPSAE YVAAH PY+AWL QASA++A AAQHE AAAAYTTALA MPTL ELAANH H Sbjct 61 EGPSAEQYVAAHTPYLAWLAQASANSAATAAQHETAAAAYTTALATMPTLGELAANHATH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 VL+ATNF GINTIPI +NEADYVRMW+QAA M YQA +GAA+A+AP T PAP ++ P Sbjct 121 AVLLATNFLGINTIPIAVNEADYVRMWIQAATSMSTYQAVAGAAVAAAPTTAPAPYLLAP 180 Query 181 GGG-----------------AASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFL 223 G G A+ + A+N + LL+Q + G Q I FL Sbjct 181 GVGEAGQAMASVQQLGAQAQASESGSALNISDSINQLLEQYLQSAPGG-----QEIIDFL 235 Query 224 QDPIGNSIKIIIAFLTNPIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGL 283 +DP+GN +I F+TNP AL+T+GPLL A+ YQ+F NLVGWPTW MI +SPFLL A + Sbjct 236 RDPLGNLQTLINDFMTNPSAALVTWGPLLSAVAYQVFTNLVGWPTWAMIFASPFLLAALI 295 Query 284 GLGLAAIAFLPIVLAPAVI-PPAST---PLAAAAVAAGSVWPAVSMAVTGAGTAGAATPA 339 LG+A + + L P + PPA A A V P + GA PA Sbjct 296 PLGIAGLVLIIDALKPELTQPPAEQTEPAPAPAPRPDQQVLPVAGVPAPGAPATPGTAPA 355 Query 340 AGAAPSAGAAPAPAAPATASFAYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAA 399 +A + A AA A YAV G GD G PTV G KAPA +PAAAAAAA Sbjct 356 GSSAAAPAAPAPAAAAAAPLVPYAVRG-GDPGEGFTPTVRDSTGAKAPAGDIPAAAAAAA 414 Query 400 TRGQSRARRRRRSEL-----RDYGDEFLDMDSDSGFGPSTGDHGAQASERGAGTLGFAGT 454 + R+RRR ++ R Y D ++D + D P A AS RGAG +GF GT Sbjct 415 AASAAERRKRRRRKITEVKGRGYADVYMDYEDDPDEPPIVEPRVA-ASSRGAGAMGFTGT 473 Query 455 ATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWEQGSNEPEAPDGSGRGG 504 A RA GLT L+ D FG GP PM+PGTW S EP+ P GG Sbjct 474 APGAADARATGLTTLSPDAFGTGPVSPMLPGTWNPDS-EPDQPAEGQEGG 522 >gi|240168498|ref|ZP_04747157.1| PPE family protein, PPE4 [Mycobacterium kansasii ATCC 12478] Length=420 Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 159/266 (60%), Positives = 196/266 (74%), Gaps = 10/266 (3%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 M AP+W+ASPPEVHS+LLS+GPGPG L+ AA +W+ +SAEYAS A EL+ LLG V AW Sbjct 1 MTAPVWIASPPEVHSSLLSSGPGPGPLLVAAASWTSISAEYASVAEELTALLGGVQIGAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 +GPSAE + AAH+PY+AWL +ASAD+AG AAQHE AA AYT ALAAMPTL ELAANH +H Sbjct 61 RGPSAEVFAAAHVPYLAWLLRASADSAGVAAQHEVAATAYTGALAAMPTLPELAANHAVH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 VL+ATNFFGINTIPI LNE DY+RMW+QAA M +Y AA ALAS P PAP ++ P Sbjct 121 AVLLATNFFGINTIPIALNEGDYLRMWIQAATAMSIYHAAVDTALASVPHATPAPPLVKP 180 Query 181 GGGAA---------STVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSI 231 G G+A S VG + PW + ALL+++ AY F W+L+ FLQDPIGN Sbjct 181 GVGSAGDAAATSVQSAVGDI-PWNLIWALLKEVAEAYLAFNVWVLKEDALFLQDPIGNLW 239 Query 232 KIIIAFLTNPIQALITYGPLLFALGY 257 +++ AF TNP AL+ +GP++FALGY Sbjct 240 QMLNAFWTNPFNALLQWGPMIFALGY 265 Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust. Identities = 24/47 (52%), Positives = 27/47 (58%), Gaps = 0/47 (0%) Query 442 SERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWE 488 S RGA LGF GTA KE GLT L E G+ R PM+P TW+ Sbjct 360 SARGAAALGFPGTAGKEAAGEPGGLTRLGDQESGDVARAPMLPATWD 406 >gi|306782914|ref|ZP_07421236.1| PPE family protein [Mycobacterium tuberculosis SUMu003] gi|308332243|gb|EFP21094.1| PPE family protein [Mycobacterium tuberculosis SUMu003] Length=152 Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 151/151 (100%), Positives = 151/151 (100%), Gaps = 0/151 (0%) Query 363 AVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFL 422 AVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFL Sbjct 2 AVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFL 61 Query 423 DMDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPM 482 DMDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPM Sbjct 62 DMDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPM 121 Query 483 VPGTWEQGSNEPEAPDGSGRGGGDGLPHDSK 513 VPGTWEQGSNEPEAPDGSGRGGGDGLPHDSK Sbjct 122 VPGTWEQGSNEPEAPDGSGRGGGDGLPHDSK 152 >gi|289748769|ref|ZP_06508147.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289689356|gb|EFD56785.1| PPE family protein [Mycobacterium tuberculosis T92] Length=150 Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 149/150 (99%), Positives = 150/150 (100%), Gaps = 0/150 (0%) Query 364 VGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFLD 423 +GGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFLD Sbjct 1 MGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFLD 60 Query 424 MDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMV 483 MDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMV Sbjct 61 MDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMV 120 Query 484 PGTWEQGSNEPEAPDGSGRGGGDGLPHDSK 513 PGTWEQGSNEPEAPDGSGRGGGDGLPHDSK Sbjct 121 PGTWEQGSNEPEAPDGSGRGGGDGLPHDSK 150 >gi|333988934|ref|YP_004521548.1| PPE family protein [Mycobacterium sp. JDM601] gi|333484902|gb|AEF34294.1| PPE family protein [Mycobacterium sp. JDM601] Length=465 Score = 290 bits (743), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 240/510 (48%), Positives = 293/510 (58%), Gaps = 80/510 (15%) Query 17 LLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAWQGPSAEWYVAAHLPYV 76 +LS+GPGPG L++AA AW+ LS EYAS A EL+ LLGAV AWQGPSAE Y+AAH+PY+ Sbjct 1 MLSSGPGPGPLLSAAGAWNALSVEYASVADELTALLGAVQSGAWQGPSAEQYLAAHVPYL 60 Query 77 AWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIHTVLVATNFFGINTIPI 136 AWL +ASAD+AG AAQHE AA+AY +ALA MPTLAELAANH+ H VLVATNFFGINTIPI Sbjct 61 AWLGKASADSAGVAAQHEVAASAYASALATMPTLAELAANHMTHGVLVATNFFGINTIPI 120 Query 137 TLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMN-----PGGGAASTVGAV 191 LNEADY RMW+QAA M Y A SGAALASAPRTV AP ++ P +S +G Sbjct 121 ALNEADYARMWVQAATTMSTYHAVSGAALASAPRTVQAPPMLKADTAQPAADTSSDIGD- 179 Query 192 NPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTNPIQALITYGPL 251 +LW+ QL+ QF DPIG +I L++P AL+T+ PL Sbjct 180 --------FFTRLWD----------QLV-QFFTDPIG----VIREILSSP-GALVTWFPL 215 Query 252 LFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLAPAVIPPASTPLAA 311 LF + Y+ FF GW W ++ +S L+P LG+GL +A + L Sbjct 216 LFFIAYEAFFIPFGWTFWSLLFASAALVPILLGVGLGHLADM---------------LGG 260 Query 312 AAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATAS------------ 359 G + P V +AV +G ATP AG +P+ A P AS Sbjct 261 ELAPDGDLKP-VPVAVAPSGDR--ATPVV-----AGFSPSVATPGAASVTAAPATPAAAP 312 Query 360 ---------FAYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRR 410 F Y V G GD G LGPT+ R +APA+ VPAAAAA + R+R RR Sbjct 313 APAAGGAIGFGYLVAG-GDPGTGLGPTLTERNKAQAPASRVPAAAAAVGASARERSRARR 371 Query 411 RSE--LRDYGDEFLDMDSDSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTA 468 R L D+ DE++DMDS GP A S+RGAG LGF GT A GLT Sbjct 372 RRRAVLHDHADEYMDMDSGPA-GPVDEPASAAGSDRGAGALGFTGTVGGRGTAAASGLTT 430 Query 469 LAGDEFGNGPRMPMVPGTWEQGSNEPEAPD 498 LAGD FG GP +PM+P TW + NE PD Sbjct 431 LAGDGFGGGPGVPMLPETWSE--NELSGPD 458 >gi|308395076|ref|ZP_07669329.1| hypothetical protein TMLG_03609 [Mycobacterium tuberculosis SUMu012] gi|308367499|gb|EFP56350.1| hypothetical protein TMLG_03609 [Mycobacterium tuberculosis SUMu012] Length=144 Score = 286 bits (733), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 143/144 (99%), Positives = 143/144 (99%), Gaps = 0/144 (0%) Query 370 WGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFLDMDSDSG 429 GPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFLDMDSDSG Sbjct 1 MGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFLDMDSDSG 60 Query 430 FGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWEQ 489 FGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWEQ Sbjct 61 FGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWEQ 120 Query 490 GSNEPEAPDGSGRGGGDGLPHDSK 513 GSNEPEAPDGSGRGGGDGLPHDSK Sbjct 121 GSNEPEAPDGSGRGGGDGLPHDSK 144 >gi|296167589|ref|ZP_06849914.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897132|gb|EFG76743.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=311 Score = 285 bits (730), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 170/280 (61%), Positives = 200/280 (72%), Gaps = 18/280 (6%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 M AP+WMASPPEVHS LLS GPGPG L+AAA AW+ LSAEYA+ AAEL+G+LG AW Sbjct 1 MTAPVWMASPPEVHSTLLSAGPGPGPLLAAAGAWTSLSAEYATAAAELTGVLGETQAGAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QGP+ Y+AAH+PY+AWL QASAD+AG AAQHE AAAAYT ALAAMPTL ELAANH +H Sbjct 61 QGPTGAQYLAAHVPYLAWLQQASADSAGVAAQHEVAAAAYTAALAAMPTLGELAANHAVH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 VLVATNFFG+NTIPI +NEADY RMW+QAA VMG YQA SGAALASAPR+ PAP+++ P Sbjct 121 GVLVATNFFGVNTIPIAVNEADYARMWVQAATVMGAYQATSGAALASAPRSTPAPSIVRP 180 Query 181 GGGA---ASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAF 237 GG A ++ P W L+QQL +FLQD N +++ F Sbjct 181 GGDANTLSANTAQNTPGNWWQNLIQQL---------------SKFLQDFFQNIQQMLQNF 225 Query 238 LTNPIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPF 277 N L GPLLF + YQ+FFN VGWPTWG IL++PF Sbjct 226 SANLPAFLAANGPLLFFVAYQVFFNAVGWPTWGAILTAPF 265 >gi|240172392|ref|ZP_04751051.1| PPE protein [Mycobacterium kansasii ATCC 12478] Length=513 Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 224/518 (44%), Positives = 282/518 (55%), Gaps = 56/518 (10%) Query 6 WMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAWQGPSA 65 WMA PPEVHSA LS+GPGPG+ +AAA A+ LSAEY S EL+ +L AV G +WQGP+A Sbjct 9 WMALPPEVHSAQLSSGPGPGAFLAAAGAYQVLSAEYGSAVGELAAVLNAVQGGSWQGPTA 68 Query 66 EWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIHTVLVA 125 E YVAAH PY+ WL QA + A QH+ AA AYT ALA+MPTLAELAANHV+H VLVA Sbjct 69 EEYVAAHAPYLVWLEQARGKSIAAGLQHQLAAQAYTAALASMPTLAELAANHVVHGVLVA 128 Query 126 TNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNPGGGAA 185 TNFFGINTIPI LNEADY RMW+QAA M +YQA S A S P T PAP ++ A Sbjct 129 TNFFGINTIPIALNEADYFRMWVQAATTMSIYQAVSNVAADSVPATSPAPPLLK-----A 183 Query 186 STVGAVNPWQW--------------LLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSI 231 T A +P Q L L+ QL AY + + I FLQDP+GN + Sbjct 184 DTSDAADPAQLTALASATDAGNQLNLADLVSQLLQAYINYVEQLYAPIIDFLQDPVGNGM 243 Query 232 KIIIAFLTNPIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFL---LPAGLGLGLA 288 ++I FLTNP QAL+ +GP LFA+ YQ F + T+ ++ P L L +G+G Sbjct 244 QLITDFLTNPSQALVAWGPFLFAVAYQAFSWVGASLTYPQLILDPLLGTILRVVIGVGEQ 303 Query 289 AIAFLPIVLAPAV--------IPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAA 340 + +P A + PA+ P+A WPAV +A + A +A Sbjct 304 LLVQVPAAAAAGDLAGGAGGSVAPAAYPVA---------WPAVGVASSVTAPVAAPAASA 354 Query 341 GAAPSAGAAPAPAAPATASFAYAVGGSGDWGPSLG--PTVGGRGGIKAPAA--TVPAAAA 396 A+ A A A+ A G + P G P + G K P+ PAAA Sbjct 355 AASAGTAPA------APAAPAAVTYAVGGFDPDEGFPPALTHNSGAKVPSVGVPAPAAAV 408 Query 397 AAATRGQSRARRRRRSELRDYGDEFLDMDSDSG------FGPSTGDHGAQASERGAGTLG 450 +A + ++R RR+ R Y DEF+DMD D+G D A AS RGAG +G Sbjct 409 SAREQRRARRRRKTTEPQRQYADEFMDMDGDAGNDLREDLPEDVEDLRAAASSRGAGAIG 468 Query 451 FAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWE 488 F GTA K A GL L F +GP PM+P TW+ Sbjct 469 FGGTAAK-GNADAAGLVTLPAHSFDDGPASPMLPATWD 505 >gi|308376354|ref|ZP_07438550.2| hypothetical protein TMHG_03296 [Mycobacterium tuberculosis SUMu008] gi|308351343|gb|EFP40194.1| hypothetical protein TMHG_03296 [Mycobacterium tuberculosis SUMu008] Length=140 Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 139/140 (99%), Positives = 140/140 (100%), Gaps = 0/140 (0%) Query 374 LGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFLDMDSDSGFGPS 433 +GPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFLDMDSDSGFGPS Sbjct 1 MGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRSELRDYGDEFLDMDSDSGFGPS 60 Query 434 TGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWEQGSNE 493 TGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWEQGSNE Sbjct 61 TGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWEQGSNE 120 Query 494 PEAPDGSGRGGGDGLPHDSK 513 PEAPDGSGRGGGDGLPHDSK Sbjct 121 PEAPDGSGRGGGDGLPHDSK 140 >gi|183981440|ref|YP_001849731.1| PPE family protein [Mycobacterium marinum M] gi|183174766|gb|ACC39876.1| PPE family protein [Mycobacterium marinum M] Length=527 Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 250/552 (46%), Positives = 298/552 (54%), Gaps = 71/552 (12%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 M APIWMASPPEVHSALLS+GPGPG L++AA AWSQLS EYAS A EL+ +LGAV W Sbjct 1 MTAPIWMASPPEVHSALLSSGPGPGPLLSAAAAWSQLSNEYASAANELTAMLGAVQAGPW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 +G SAE YVAAHLPYVAWL QAS D AAAQ E AAAAYTTALAAMPTL ELA NH IH Sbjct 61 EGSSAEQYVAAHLPYVAWLMQASVDTTQAAAQLETAAAAYTTALAAMPTLPELATNHTIH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 L ATNFFGINTIPITLNEADYVRMW+QAA M YQA SG ALAS P+T PAP ++ Sbjct 121 AALTATNFFGINTIPITLNEADYVRMWIQAATTMSTYQAVSGTALASTPQTAPAPYILKS 180 Query 181 GGGAAST---VGAVNPWQWLLA-LLQQL------------------WNAYT--GFYGWML 216 + V +P L+A +L+ + + YT G W + Sbjct 181 NAQTEDSQPPVEGSDPLDSLVADILRAITDGRVNWDPVSRTVNGIEYEEYTDAGDPVWWV 240 Query 217 QLIWQFLQDPIGNSIKIIIAFL-TNPIQALITYGPLLFALGYQIFF-NLVGWPTWGMILS 274 +F QD + L T+P AL YG LF Y + L+ W + Sbjct 241 VRALEFSQD-----FRTFARLLPTDPQAALQFYGE-LFLFDYPVHIPQLLTW-----LSQ 289 Query 275 SPFLLPAGLGL------------GLAAIAFLPIVLAPAVIPPASTPLAAAAVAAGSVWPA 322 SP LL LG GLA +A PI + + P + P A + S+ P Sbjct 290 SPQLLAVALGQAVSGLGAVTGFAGLAGLAAQPIGTVASALGPVAAP--ADMLPVTSMAPT 347 Query 323 VSMAVTG-AGTAGAATPAAGAAPSAGAAPAPAAPATASFAYAVGGSGDWGPSLGPTVGGR 381 V+ V A A A P A A S+ Y +GG GPS+G G Sbjct 348 VTTPVAAPVSATAPAPATALTAGGPPPVPPAAGGAGFSYPYLIGG----GPSIGFGSGMS 403 Query 382 GGIKAPAATV---PAAAAAAATRGQSRARRRRRSELRDYGDEFLDMDSDSGFGPSTGD-- 436 A A P AAAAA R ++RARRRRR+ LR YGDEF+D++ D +G G+ Sbjct 404 TSASASAKKKTPEPDTAAAAAARERARARRRRRATLRGYGDEFMDIEVDPDWGAPPGEGP 463 Query 437 -HGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWEQGSNEPE 495 AS+ GAG +G AGT A GLT L GD+F PRMPM+PGTW+ Sbjct 464 GASTVASDHGAGPVGIAGTVHTGSVTPAAGLTTLGGDDFDGEPRMPMLPGTWD------- 516 Query 496 APDGSGRGGGDG 507 PDG+ R G G Sbjct 517 -PDGA-RDAGKG 526 >gi|120401440|ref|YP_951269.1| PPE protein [Mycobacterium vanbaalenii PYR-1] gi|119954258|gb|ABM11263.1| PPE protein [Mycobacterium vanbaalenii PYR-1] Length=524 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 243/516 (48%), Positives = 305/516 (60%), Gaps = 24/516 (4%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 M++P+WMA PPEVHSALLS+GPGPGS++AAA W LSAEYA+ AAELS +L V AW Sbjct 1 MSSPVWMALPPEVHSALLSSGPGPGSMLAAAATWQSLSAEYAAAAAELSSILADVQAGAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 +GPS+E YVAAH PY+AWL Q SA A AAAQHEAAAAAY+TALA MPTL ELA NH H Sbjct 61 EGPSSEQYVAAHTPYLAWLAQQSAAGAAAAAQHEAAAAAYSTALATMPTLPELALNHTTH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 VLVATNF GINTIPI + EADYVRMW+QAA M YQA SGAALA+ P PAP V+ P Sbjct 121 AVLVATNFLGINTIPIAMTEADYVRMWIQAATTMATYQAVSGAALAATPTATPAPFVLAP 180 Query 181 GGGAASTVGAVNPWQW-------------LLALLQQLWNAYTGFYGWMLQLIWQFLQDPI 227 G G A A L ++ L AY ++ + I+ FL+DP+ Sbjct 181 GVGEAGRAAADVTAFAAQAQAAEAGSALDLSNIIADLIRAYGELLRFLFEPIFDFLRDPL 240 Query 228 GNSIKIIIAFLTNPIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGL 287 GN+IK+I FLTNP QALIT+GP L A+ YQ + VG L L+ L + L Sbjct 241 GNTIKLITDFLTNPAQALITWGPFLAAVAYQA-VSWVGASILYPSLLLLPLVATTLAIVL 299 Query 288 AAIAFLPIVL-APAVIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAA-PS 345 A+L L APA PA P A++ + P+ ++AV+ +A G Sbjct 300 GVGAYLLENLPAPAEDAPAEEPAASSPAPTRADQPSPAIAVSAPPPPSSAAATVGTVATG 359 Query 346 AGAAPAPAAPATASFA-YAVGGSGDWGPSLGPTVGGRGGIKAPAATVP--AAAAAAATRG 402 AP A ATASF YAV G D G PTV KAPA+ +P A+ AA+ Sbjct 360 TAPAPGAPAAATASFVPYAVAGR-DPGTGFSPTVRDSTSAKAPASGIPAAASGVAASAAE 418 Query 403 QSRARRRRRSEL--RDYGDEFLDMDSDSGFGPSTGDH-GAQASERGAGTLGFAGTATKER 459 + + RRR++ E+ R Y D + D + + P A+ERGAG +GFAGT +++ Sbjct 419 RRKRRRRQKDEIAGRAYADAYADYEPEPDDEPPVRQEPRIAATERGAGPMGFAGTVSRD- 477 Query 460 RVRAVGLTALAGDEFGNGPRMPMVPGTWEQGSNEPE 495 +A GLT L GD FG GP+ PM+PGTW+ + E Sbjct 478 AAQAGGLTTLPGDPFGGGPKAPMLPGTWDPDTEPDE 513 >gi|289748258|ref|ZP_06507636.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289688845|gb|EFD56274.1| PPE family protein [Mycobacterium tuberculosis T92] Length=410 Score = 252 bits (644), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 130/192 (68%), Positives = 148/192 (78%), Gaps = 0/192 (0%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 M APIW ASPPEVHSALLS GPGP SL AAA W+ LSAEYAS A EL+ +L AV G AW Sbjct 1 MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 +GPSAE YVAAHLPY+AWLT++SAD+A A QHE AY +ALAAMPTL ELAANH H Sbjct 61 EGPSAEAYVAAHLPYLAWLTKSSADSARLATQHEVMTTAYASALAAMPTLTELAANHTSH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 VL+ TNFFGINTIPI LNEADY RMW+QAA M +Y+ S AALASAP+T PAP + N Sbjct 121 AVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEGTSDAALASAPQTTPAPVLFNG 180 Query 181 GGGAASTVGAVN 192 G G AS + A++ Sbjct 181 GAGVASALPAIS 192 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/49 (68%), Positives = 36/49 (74%), Gaps = 0/49 (0%) Query 441 ASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWEQ 489 AS+RGAG LGFAGTA KE R GLT LAG EFG P +PMVP +WEQ Sbjct 354 ASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPMVPASWEQ 402 >gi|340628712|ref|YP_004747164.1| ppe family protein [Mycobacterium canettii CIPT 140010059] gi|340006902|emb|CCC46091.1| ppe family protein [Mycobacterium canettii CIPT 140010059] Length=398 Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 130/192 (68%), Positives = 148/192 (78%), Gaps = 0/192 (0%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 M APIW ASPPEVHSALLS GPGP SL AAA W+ LSAEYAS A EL+ +L AV G AW Sbjct 1 MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 +GPSAE YVAAHLPY+AWLT++SAD+A A QHE AY +ALAAMPTL ELAANH H Sbjct 61 EGPSAEAYVAAHLPYLAWLTKSSADSARLATQHEVMTTAYASALAAMPTLTELAANHTSH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 VL+ TNFFGINTIPI LNEADY RMW+QAA M +Y+ S AALASAP+T PAP + N Sbjct 121 AVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEGTSDAALASAPQTTPAPVLFNG 180 Query 181 GGGAASTVGAVN 192 G G AS + A++ Sbjct 181 GAGVASALPAIS 192 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/51 (69%), Positives = 37/51 (73%), Gaps = 0/51 (0%) Query 439 AQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWEQ 489 A ASERGAG LGFAGTA KE R GLT LAG EFG P +PMVP +WEQ Sbjct 340 AVASERGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGNPSVPMVPASWEQ 390 >gi|289445339|ref|ZP_06435083.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289418297|gb|EFD15498.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=410 Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 129/192 (68%), Positives = 147/192 (77%), Gaps = 0/192 (0%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 M APIW ASPPEVHSAL S GPGP SL AAA W+ LSAEYAS A EL+ +L AV G AW Sbjct 1 MTAPIWFASPPEVHSALRSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 +GPSAE YVAAHLPY+AWLT++SAD+A A QHE AY +ALAAMPTL ELAANH H Sbjct 61 EGPSAEAYVAAHLPYLAWLTKSSADSARLATQHEVMTTAYASALAAMPTLTELAANHTSH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 VL+ TNFFGINTIPI LNEADY RMW+QAA M +Y+ S AALASAP+T PAP + N Sbjct 121 AVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEGTSDAALASAPQTTPAPVLFNG 180 Query 181 GGGAASTVGAVN 192 G G AS + A++ Sbjct 181 GAGVASALPAIS 192 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/49 (68%), Positives = 36/49 (74%), Gaps = 0/49 (0%) Query 441 ASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWEQ 489 AS+RGAG LGFAGTA KE R GLT LAG EFG P +PMVP +WEQ Sbjct 354 ASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPMVPASWEQ 402 >gi|289441176|ref|ZP_06430920.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289414095|gb|EFD11335.1| PPE family protein [Mycobacterium tuberculosis T46] Length=427 Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 129/190 (68%), Positives = 147/190 (78%), Gaps = 0/190 (0%) Query 3 APIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAWQG 62 APIW ASPPEVHSALLS GPGP SL AAA W+ LSAEYAS A EL+ +L AV G AW+G Sbjct 20 APIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAWEG 79 Query 63 PSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIHTV 122 PSAE YVAAHLPY+AWLT++SAD+A A QHE AY +ALAAMPTL ELAANH H V Sbjct 80 PSAEAYVAAHLPYLAWLTKSSADSARLATQHEVMTTAYASALAAMPTLTELAANHTSHAV 139 Query 123 LVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNPGG 182 L+ TNFFGINTIPI LNEADY RMW+QAA M +Y+ S AALASAP+T PAP + N G Sbjct 140 LLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEGTSDAALASAPQTTPAPVLFNGGA 199 Query 183 GAASTVGAVN 192 G AS + A++ Sbjct 200 GVASALPAIS 209 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 33/49 (68%), Positives = 36/49 (74%), Gaps = 0/49 (0%) Query 441 ASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWEQ 489 AS+RGAG LGFAGTA KE R GLT LAG EFG P +PMVP +WEQ Sbjct 371 ASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPMVPASWEQ 419 >gi|315442101|ref|YP_004074980.1| PPE-repeat containing protein [Mycobacterium sp. Spyr1] gi|315260404|gb|ADT97145.1| PPE-repeat containing protein [Mycobacterium sp. Spyr1] Length=530 Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 153/274 (56%), Positives = 187/274 (69%), Gaps = 19/274 (6%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 M +P+WMA PPEVHS +LS+GPGPGSL+AA AW LSAEYAS AAEL+ +L V AW Sbjct 1 MTSPVWMALPPEVHSTMLSSGPGPGSLLAAGVAWQSLSAEYASAAAELTSILAGVQSGAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 +GPS++ YVAAH PY+AWL Q SA +A A QH+ AAAAYTTALA MPTL ELA NH H Sbjct 61 EGPSSQQYVAAHTPYLAWLAQQSAVSAATAVQHDTAAAAYTTALATMPTLPELALNHTTH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 VLV TNF GINTIPI LNEADYVRMW+QAA M YQ+ SGAALA+ P + PAP+V+ P Sbjct 121 AVLVGTNFLGINTIPIALNEADYVRMWIQAATTMATYQSVSGAALAATPTSAPAPSVLLP 180 Query 181 GGGA----------------ASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQ 224 G G A+ GA ++A + +L+ F + + I+ FL+ Sbjct 181 GVGEAGRAAADMSAFAAQPMAAQAGAAFDVSNIIADIIRLYGEVLRF---LFEPIFNFLR 237 Query 225 DPIGNSIKIIIAFLTNPIQALITYGPLLFALGYQ 258 DPIGN+ +I FLTNP+QALIT+GP L A+ YQ Sbjct 238 DPIGNTFALITDFLTNPVQALITWGPFLLAVVYQ 271 >gi|145220929|ref|YP_001131607.1| PPE protein [Mycobacterium gilvum PYR-GCK] gi|145213415|gb|ABP42819.1| PPE protein [Mycobacterium gilvum PYR-GCK] Length=540 Score = 246 bits (627), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 152/274 (56%), Positives = 187/274 (69%), Gaps = 19/274 (6%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 + +P+WMA PPEVHS +LS+GPGPGSL+AA AW LSAEYAS AAEL+ +L V AW Sbjct 11 VTSPVWMALPPEVHSTMLSSGPGPGSLLAAGVAWQSLSAEYASAAAELTSILAGVQSGAW 70 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 +GPS++ YVAAH PY+AWL Q SA +A A QH+ AAAAYTTALA MPTL ELA NH H Sbjct 71 EGPSSQQYVAAHTPYLAWLAQQSAVSAATAVQHDTAAAAYTTALATMPTLPELALNHTTH 130 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 VLV TNF GINTIPI LNEADYVRMW+QAA M YQ+ SGAALA+ P + PAP+V+ P Sbjct 131 AVLVGTNFLGINTIPIALNEADYVRMWIQAATTMATYQSVSGAALAATPTSAPAPSVLLP 190 Query 181 GGGA----------------ASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQ 224 G G A+ GA ++A + +L+ F + + I+ FL+ Sbjct 191 GVGEAGRAAADMSAFAAQPMAAQAGAAFDVSNIIADIIRLYGEVLRF---LFEPIFNFLR 247 Query 225 DPIGNSIKIIIAFLTNPIQALITYGPLLFALGYQ 258 DPIGN+ +I FLTNP+QALIT+GP L A+ YQ Sbjct 248 DPIGNTFALITDFLTNPVQALITWGPFLLAVVYQ 281 >gi|169631856|ref|YP_001705505.1| PPE family protein [Mycobacterium abscessus ATCC 19977] gi|169243823|emb|CAM64851.1| PPE family protein [Mycobacterium abscessus] Length=496 Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 155/320 (49%), Positives = 198/320 (62%), Gaps = 23/320 (7%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 M AP+WMA+PPEVHSALLS+GPGPGSL AAA AW LS EY+S A EL+ LG+V W Sbjct 1 MTAPVWMAAPPEVHSALLSSGPGPGSLFAAADAWRSLSTEYSSAANELTTTLGSVRAGVW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 G SAE Y AH+PY++WL + SA +AG AAQ E AA AY+ ALA MPTL ELAANH H Sbjct 61 DGASAEQYQTAHVPYLSWLHETSAVSAGVAAQTETAATAYSEALATMPTLGELAANHATH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 LVATNFFGINTIPI +NEADY+RMW+QAA VM YQA S +++++AP T PAP V++P Sbjct 121 GALVATNFFGINTIPIAVNEADYIRMWIQAATVMSTYQAVSESSVSAAPPTSPAPPVLSP 180 Query 181 GGGAASTVGAV-------------NPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPI 227 GAA+ A +P + LL Q Y G + DP+ Sbjct 181 DSGAAARTAAQDATKPPPIVPDPNDPIEMLLKNSQHFLGMYRALKG--------LITDPV 232 Query 228 GNSIKIIIAFLTNPIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGL 287 G ++III F TNP A++T+ PL + Y F ++G P + I+ + L + L Sbjct 233 GTIVRIIIDFSTNPAAAIVTWTPLFYVFAYAATFAVMGTPIYAAIMGPAAGISIPLAITL 292 Query 288 AAIAFLPIVLAPAVIPPAST 307 A+++ +P AP V PA T Sbjct 293 ASLSQMP--EAPPVDAPAET 310 >gi|169629316|ref|YP_001702965.1| PPE family protein [Mycobacterium abscessus ATCC 19977] gi|169241283|emb|CAM62311.1| Hypothetical PPE family protein [Mycobacterium abscessus] Length=523 Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 152/274 (56%), Positives = 191/274 (70%), Gaps = 2/274 (0%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 M+APIWMASPPEVHSALLS GPGPG+L+AAA W LS +Y + A EL+ LL A +W Sbjct 1 MSAPIWMASPPEVHSALLSAGPGPGALLAAAAQWQALSVQYTTAATELTQLLAATGSGSW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QGPSA YVA+H PY+AWLTQ SA +A A HE +AAAYTTALAAMPTLAELAANH+IH Sbjct 61 QGPSAAQYVASHAPYLAWLTQQSAMSATNAVLHETSAAAYTTALAAMPTLAELAANHMIH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 VL+ATNFFGINTIPI LNEADY+RMW+QAA MG+YQ S AA+ S T PAPT+M P Sbjct 121 GVLLATNFFGINTIPIALNEADYIRMWIQAATTMGVYQGVSTAAVTSVAPTPPAPTIMAP 180 Query 181 GGGAASTVGAVNPW--QWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFL 238 GG + ++ Q A + F+ +++ I +F DP+G KI+ F+ Sbjct 181 GGEMSRMSADMSGMAAQAQAAESGMALDDSESFFDKLMRQIQEFFSDPLGTLQKILQDFM 240 Query 239 TNPIQALITYGPLLFALGYQIFFNLVGWPTWGMI 272 NP++AL+ +GPLLF + Y+ FF G+ WG++ Sbjct 241 RNPLEALVAWGPLLFFIAYEAFFIPFGFTFWGVM 274 >gi|169629340|ref|YP_001702989.1| PPE family protein [Mycobacterium abscessus ATCC 19977] gi|169241307|emb|CAM62335.1| PPE family protein [Mycobacterium abscessus] Length=503 Score = 243 bits (619), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 221/520 (43%), Positives = 277/520 (54%), Gaps = 47/520 (9%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 M+APIWMA PPEVHSALL GPGPG L+AAA W LS EY+ A EL+ LLG W Sbjct 1 MSAPIWMAFPPEVHSALLGAGPGPGPLLAAAAQWHALSYEYSMAATELTQLLGVTAAGVW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QG SA YVA+H PY+AWLTQ SA +A AA HE +AAAYTTALAAMPTL ELA NH +H Sbjct 61 QGSSATQYVASHTPYLAWLTQQSATSAANAALHETSAAAYTTALAAMPTLPELATNHTVH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 +LV TNFFGINTIPI LNEADYVRMW+QAA MG+YQ S A+A+A T +P +M P Sbjct 121 GILVGTNFFGINTIPIALNEADYVRMWVQAATTMGVYQGVSSTAVAAAAPTTTSPLIMPP 180 Query 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFLTN 240 G + ++ + A + +A + QL+ F +DP+G +II F+ N Sbjct 181 GSELSRMAADMSGFA-AQAQATESGSALDSSNSVIDQLL-NFFRDPLGTLRQIIEDFIRN 238 Query 241 PIQALITYGPLLFALGYQ--IFFNLVGWPTWGMILSSPFLLPAGLGLGLAAIAFLPIVLA 298 P AL T+ P L L + F V W W +LS+P LP L LAA +L Sbjct 239 PGAALATWLPFLLVLASMTYVLFAQVFWLFWAALLSAPLWLPL---LILAAWQYL----- 290 Query 299 PAVIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSA------------ 346 P A A A + P + V G PA AP+A Sbjct 291 --------QPPAVDAAPADEIRPELGSTVNGQREHIEPLPAIALAPTATPVPTASASAPS 342 Query 347 -GAAPAPAAPATASFA-YAVGGSGDWGPSL--GPTVGGRGGIKAPAATVPAAAAAAATRG 402 A A A FA Y VG D P++ GPT+ G A+ +AAAAAA Sbjct 343 APAPAPAPTAAGAGFAPYLVGAIPDEPPAIQFGPTL-NEGNKAQAPASGISAAAAAAASA 401 Query 403 QSRARRRRRSELRDYGDEFLDM----DSDSGFGPSTGDHGAQASERGAGTLGFAGTATKE 458 +SRARR+R + ++D +++DM D+D G P + + AS RGAG LG AGT+ K Sbjct 402 RSRARRKRGARVKDPAPQYMDMNVTVDADYGEPPGSAQRQSTASARGAGHLGLAGTSPK- 460 Query 459 RRVRAVGLTALAG-----DEFGNGPRMPMVPGTWEQGSNE 493 A GL A D +PM+P TW S+E Sbjct 461 TTATAAGLVARGSAGSDTDVPETARIVPMIPTTWSTDSDE 500 >gi|169627152|ref|YP_001700801.1| PPE family protein [Mycobacterium abscessus ATCC 19977] gi|169239119|emb|CAM60147.1| Probable PPE family protein [Mycobacterium abscessus] Length=510 Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 156/294 (54%), Positives = 201/294 (69%), Gaps = 10/294 (3%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 M+APIWMASPPEVHSALLS GPGPG+L+AAA W LS +YA+ A EL+ LLG+ +W Sbjct 1 MSAPIWMASPPEVHSALLSAGPGPGALLAAAAQWQALSTQYATAATELTELLGSTVAGSW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QGPSA Y A+H PY+AWLTQ SA +A A HE +AAAYTTALAAMPTLAELAANH+IH Sbjct 61 QGPSAMQYAASHAPYLAWLTQQSAMSATNAVLHETSAAAYTTALAAMPTLAELAANHMIH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 VL+ATNFFGINTIPI LNEADY+RMW+QAA MG+YQ S AALA+ T P+P +M P Sbjct 121 GVLLATNFFGINTIPIALNEADYIRMWIQAATTMGVYQGVSSAALAATTPTQPSPMIMAP 180 Query 181 GGGAASTVGAVNPWQWLLALLQQLWNAYTG----FYGWMLQLIWQFLQDPIGNSIKIIIA 236 GG + ++++ Q A +G ++ + +F+ +P+G +I Sbjct 181 GGEMSRMSAD------MMSMAAQPQAAESGSALDSSNNIMDQLMRFMTNPLGTLQDMIED 234 Query 237 FLTNPIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGLGLAAI 290 F+ NP+ A + PLLF + Y+ FF G+ WG++LS+P LP LGL L+A+ Sbjct 235 FMRNPVAAFFAWFPLLFFIAYEAFFIPFGFTFWGVLLSAPAWLPIVLGLALSAL 288 >gi|183980812|ref|YP_001849103.1| PPE family protein [Mycobacterium marinum M] gi|183174138|gb|ACC39248.1| PPE family protein [Mycobacterium marinum M] Length=412 Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 127/190 (67%), Positives = 140/190 (74%), Gaps = 0/190 (0%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 M A +WMASPPEVHSALLS GPGPG L AATAW+ L AE+ S A EL+ LLG V AW Sbjct 1 MTASVWMASPPEVHSALLSAGPGPGPLHEAATAWTALCAEHTSAAEELTTLLGGVQAAAW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QG SA+ YV AH PY+AWLT SAD A AA+HE AA AYT+ALAAMPTLAEL ANH H Sbjct 61 QGTSAQSYVDAHAPYLAWLTTTSADYAATAAEHEVAAGAYTSALAAMPTLAELTANHTTH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 T LVATNFFG+NTIPITLNEADY RMW+QAA M YQ SG LAS P T PAP ++N Sbjct 121 TALVATNFFGLNTIPITLNEADYARMWVQAATTMSAYQVVSGTTLASMPHTTPAPPILNT 180 Query 181 GGGAASTVGA 190 G A+ V A Sbjct 181 QIGTATNVAA 190 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 27/62 (44%), Positives = 33/62 (54%), Gaps = 2/62 (3%) Query 432 PSTGDHGAQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTWEQGS 491 P+ G ASE+ A +GFAGTA GLT L E G+G R+PM+P WE G Sbjct 344 PTIGKVPEVASEQNA--MGFAGTAVNRPVQSPAGLTILGNGESGHGSRVPMLPAAWEHGL 401 Query 492 NE 493 E Sbjct 402 TE 403 >gi|169627772|ref|YP_001701421.1| PPE-family protein [Mycobacterium abscessus ATCC 19977] gi|169239739|emb|CAM60767.1| Hypothetical PPE-family protein [Mycobacterium abscessus] Length=468 Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 203/502 (41%), Positives = 271/502 (54%), Gaps = 55/502 (10%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 M APIWMA PPEVHSALLS GPGPG+++AAA W ++ YA+TA EL+ +L V +W Sbjct 1 MTAPIWMAEPPEVHSALLSAGPGPGAVLAAAVQWQEIGNNYANTAVELAQVLAGVRAGSW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 QGPSA YVAAHLPY+AWL QA+A+++ AAQHE AAAY +ALAAMPTLAELAANH+ H Sbjct 61 QGPSASEYVAAHLPYLAWLEQAAAESSVIAAQHETTAAAYNSALAAMPTLAELAANHITH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 VLV TNFFGINTIPI LNEADYVRMW+QAAA M YQA + A ++ P T P +++P Sbjct 121 GVLVGTNFFGINTIPIALNEADYVRMWVQAAATMSAYQATTEAMTSAIPPTQQPPAILSP 180 Query 181 GGGAASTVGAV--NPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDPIGNSIKIIIAFL 238 GG A S V +P Q ++ +LQ GF W ++ + +P +++ +I Sbjct 181 GGEARSDQSDVPGSPDQ-IMKMLQ-------GFQQWFEKMGF----NPATSAVLAVI--- 225 Query 239 TNPIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSPFLLPAGLGL-GLAAIAFL---- 293 +LF ++L+ +P + L PFL+PA GL GLAA+ L Sbjct 226 ------------MLF------LYDLLWYPYYASYLL-PFLIPALSGLSGLAALMHLRPAA 266 Query 294 -----PIVLAPAVIPPASTPLAAAAVAAGSVWPAVSMAVTGAGTAGAATPAAGAAPSAGA 348 L+P P A P S+ +G + +TP A A + + Sbjct 267 PGPVPAAALSPGDRPIRRPTQHVEPNLAALPLPTSSVVPSGGSSVPVSTPTAPAH-TVSS 325 Query 349 APAPAAPATASFAYAVGGSGDWGPSLGPTVGGRGGIKAPAATVPAAAAAAATRGQSRARR 408 PAP +A+ +YA+ G G S GP + A AAA A Q+R R Sbjct 326 VPAP----SAAISYAIPGLVPPGVSFGPKSTEKSSESAVDTVAAVAAARGAVAAQARRRL 381 Query 409 RRRSELRDYGDEFLDMDSDSGFGPS-TGDHGAQASE-RGAGTLGFAGTATKERRVRAVGL 466 R +++ G ++ +G G + T D A A+ RG G LGFAGTA Sbjct 382 RGKNKAEAGGRRHEYLEETAGMGATATADVPAYAATGRGTGPLGFAGTAPAAASTHVAAT 441 Query 467 TALAGDEFGNGPRMPMVPGTWE 488 L+ DE +PM+P TW+ Sbjct 442 VRLSSDEARQ--VIPMLPSTWD 461 >gi|240171483|ref|ZP_04750142.1| PPE-family protein [Mycobacterium kansasii ATCC 12478] Length=535 Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 225/545 (42%), Positives = 281/545 (52%), Gaps = 65/545 (11%) Query 1 MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW 60 M AP+W+ASPPEVHSALL++GPGP L+ AA WS LS EYA+ AAEL LL AV W Sbjct 1 MTAPVWLASPPEVHSALLNSGPGPEPLLTAAAGWSSLSDEYAAVAAELGTLLAAVQAGVW 60 Query 61 QGPSAEWYVAAHLPYVAWLTQASADAAGAAAQHEAAAAAYTTALAAMPTLAELAANHVIH 120 +GPSA+ +VAA+ PY+AWL QASAD A AA +HE AAAYT ALAAMPTL ELAANH H Sbjct 61 RGPSADAFVAAYGPYLAWLAQASADTATAATRHETLAAAYTAALAAMPTLPELAANHASH 120 Query 121 TVLVATNFFGINTIPITLNEADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNP 180 LVATNFFGINTIPI LNEADY+RMW+QAA M YQA SG+A+ S P+T PAP ++ Sbjct 121 AGLVATNFFGINTIPIALNEADYLRMWIQAATTMATYQAISGSAVTSIPQTGPAPPILKS 180 Query 181 G-----GGAASTVGAVNPWQWLLALLQQL-------------------WNAYT--GFYGW 214 G A G P L+A + ++ ++AYT G W Sbjct 181 NTPAQESGKAGDSGHATPIDNLIAEILKVISGGRIIWDPANGTLNGLPYDAYTNPGQPIW 240 Query 215 MLQLIWQFLQDPIGNSIKIIIAFLTNPIQAL-ITYGPLLFALGYQIFFNLVGWPTWGMIL 273 L +F QD G ++ TNP+ A +G L+F L I +V W + Sbjct 241 WLARALEFFQD--GEEFWRLL--FTNPVAAFEFLFGILVFDLPTHI-MQIVTW-----LA 290 Query 274 SSPFLLPAGLG---------LGLAAIAFLPIVLAPAVIPPASTP--LAAAAVAAGSVWPA 322 SP LL LG G A +A L A+ P P + + + P Sbjct 291 QSPQLLAVALGQTIATLGAATGFAGLAGLTATQIAAIPVPGPEPVLMLPMTLPGAGIAPT 350 Query 323 VSMAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASFAYAVGGSGDWGPSLGPT--VGG 380 +S A A AA A ++ AP PAA + VG GP++G + Sbjct 351 LSTATASATAPAAAPAPAAGIVASTPAPTPAAGIEGFPPFVVG-----GPTIGSDSRLST 405 Query 381 RGGIKAPAATVPAAAAAAATRGQSRARRRRRSEL----RDYGDEFLDMDSDSGFGPSTGD 436 R K PA AAAAAA + AR RRR R + DEF +M+ D D Sbjct 406 RARTKEPATDSAAAAAAAQASDRREARARRRRRTPAGERGHRDEFAEMELDGDLAAPRPD 465 Query 437 HG--AQASERGAGTLGFAGTATKERRVRAVGLTALAGDEFGNGPRMPMVPGTW----EQG 490 + AS GAG LG GTA + V A G L G G+G RMPM+PGTW + G Sbjct 466 EQQVSGASAWGAGPLGSRGTARTQTLVEAAGFATLDGSGLGDGARMPMIPGTWNAKADNG 525 Query 491 SNEPE 495 ++ P Sbjct 526 TDNPH 530 Lambda K H 0.316 0.131 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1116892002924 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40