BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0290 Length=472 Score E Sequences producing significant alignments: (Bits) Value gi|308369358|ref|ZP_07417469.2| conserved membrane protein [Myco... 879 0.0 gi|15607431|ref|NP_214804.1| transmembrane protein [Mycobacteriu... 879 0.0 gi|31791469|ref|NP_853962.1| transmembrane protein [Mycobacteriu... 877 0.0 gi|289748061|ref|ZP_06507439.1| transmembrane protein [Mycobacte... 876 0.0 gi|340625328|ref|YP_004743780.1| hypothetical protein MCAN_02991... 875 0.0 gi|306782918|ref|ZP_07421240.1| conserved membrane protein [Myco... 875 0.0 gi|298523761|ref|ZP_07011170.1| conserved hypothetical protein [... 790 0.0 gi|240172732|ref|ZP_04751391.1| transmembrane protein [Mycobacte... 725 0.0 gi|118616926|ref|YP_905258.1| transmembrane protein [Mycobacteri... 688 0.0 gi|118465427|ref|YP_883986.1| hypothetical protein MAV_4863 [Myc... 681 0.0 gi|254821602|ref|ZP_05226603.1| hypothetical protein MintA_16832... 667 0.0 gi|183980577|ref|YP_001848868.1| transmembrane protein [Mycobact... 664 0.0 gi|41409884|ref|NP_962720.1| hypothetical protein MAP3786 [Mycob... 663 0.0 gi|342859226|ref|ZP_08715880.1| hypothetical protein MCOL_10118 ... 659 0.0 gi|254777303|ref|ZP_05218819.1| hypothetical protein MaviaA2_219... 654 0.0 gi|289756356|ref|ZP_06515734.1| LOW QUALITY PROTEIN: transmembra... 648 0.0 gi|339293348|gb|AEJ45459.1| transmembrane protein [Mycobacterium... 619 3e-175 gi|15828361|ref|NP_302624.1| hypothetical protein ML2529 [Mycoba... 607 1e-171 gi|333988938|ref|YP_004521552.1| transmembrane protein [Mycobact... 525 9e-147 gi|120401445|ref|YP_951274.1| hypothetical protein Mvan_0420 [My... 467 2e-129 gi|169629312|ref|YP_001702961.1| hypothetical protein MAB_2226c ... 456 5e-126 gi|289748773|ref|ZP_06508151.1| transmembrane protein [Mycobacte... 452 6e-125 gi|118471932|ref|YP_885034.1| secretion protein Snm4 [Mycobacter... 441 1e-121 gi|296167644|ref|ZP_06849915.1| conserved hypothetical protein [... 410 3e-112 gi|145220925|ref|YP_001131603.1| hypothetical protein Mflv_0321 ... 407 2e-111 gi|315442105|ref|YP_004074984.1| secretion protein snm4 [Mycobac... 407 3e-111 gi|119866443|ref|YP_936395.1| hypothetical protein Mkms_0388 [My... 403 3e-110 gi|108797359|ref|YP_637556.1| hypothetical protein Mmcs_0379 [My... 397 2e-108 gi|126432980|ref|YP_001068671.1| hypothetical protein Mjls_0367 ... 389 8e-106 gi|296393175|ref|YP_003658059.1| secretion protein snm4 [Segnili... 275 1e-71 gi|296165970|ref|ZP_06848428.1| conserved hypothetical protein [... 264 3e-68 gi|317509549|ref|ZP_07967141.1| hypothetical protein HMPREF9336_... 254 2e-65 gi|108802524|ref|YP_642720.1| hypothetical protein Mmcs_5564 [My... 238 2e-60 gi|339293347|gb|AEJ45458.1| transmembrane protein [Mycobacterium... 232 1e-58 gi|289756355|ref|ZP_06515733.1| transmembrane protein [Mycobacte... 152 1e-34 gi|317506400|ref|ZP_07964207.1| hypothetical protein HMPREF9336_... 147 4e-33 gi|317509547|ref|ZP_07967140.1| hypothetical protein HMPREF9336_... 143 8e-32 gi|317506274|ref|ZP_07964090.1| hypothetical protein HMPREF9336_... 120 6e-25 gi|312140880|ref|YP_004008216.1| esx cluster integral membrane p... 76.3 1e-11 gi|325675482|ref|ZP_08155166.1| hypothetical protein HMPREF0724_... 76.3 1e-11 gi|226365631|ref|YP_002783414.1| hypothetical protein ROP_62220 ... 75.5 2e-11 gi|54022817|ref|YP_117059.1| hypothetical protein nfa8500 [Nocar... 74.3 4e-11 gi|296393782|ref|YP_003658666.1| secretion protein snm4 [Segnili... 74.3 4e-11 gi|240168357|ref|ZP_04747016.1| hypothetical protein MkanA1_0353... 70.5 6e-10 gi|317506955|ref|ZP_07964724.1| secretion protein snm4 [Segnilip... 69.3 1e-09 gi|343925122|ref|ZP_08764654.1| hypothetical protein GOALK_033_0... 65.1 2e-08 gi|271969302|ref|YP_003343498.1| hypothetical protein Sros_8100 ... 62.8 1e-07 gi|54022794|ref|YP_117036.1| hypothetical protein nfa8270 [Nocar... 62.4 2e-07 gi|333921709|ref|YP_004495290.1| hypothetical protein AS9A_4056 ... 62.0 2e-07 gi|302524033|ref|ZP_07276375.1| predicted protein [Streptomyces ... 60.5 7e-07 >gi|308369358|ref|ZP_07417469.2| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|308371637|ref|ZP_07425608.2| conserved membrane protein [Mycobacterium tuberculosis SUMu004] gi|308372854|ref|ZP_07430142.2| conserved membrane protein [Mycobacterium tuberculosis SUMu005] 9 more sequence titles Length=473 Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust. Identities = 472/472 (100%), Positives = 472/472 (100%), Gaps = 0/472 (0%) Query 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 60 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ Sbjct 2 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 61 Query 61 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP 120 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP Sbjct 62 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP 121 Query 121 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP 180 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP Sbjct 122 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP 181 Query 181 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF 240 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF Sbjct 182 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF 241 Query 241 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP 300 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP Sbjct 242 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP 301 Query 301 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV 360 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV Sbjct 302 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV 361 Query 361 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA 420 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA Sbjct 362 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA 421 Query 421 WVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 WVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR Sbjct 422 WVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 473 >gi|15607431|ref|NP_214804.1| transmembrane protein [Mycobacterium tuberculosis H37Rv] gi|15839676|ref|NP_334713.1| hypothetical protein MT0303 [Mycobacterium tuberculosis CDC1551] gi|148660056|ref|YP_001281579.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra] 46 more sequence titles Length=472 Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust. Identities = 472/472 (100%), Positives = 472/472 (100%), Gaps = 0/472 (0%) Query 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 60 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ Sbjct 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 60 Query 61 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP 120 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP Sbjct 61 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP 120 Query 121 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP 180 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP Sbjct 121 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP 180 Query 181 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF 240 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF Sbjct 181 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF 240 Query 241 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP 300 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP Sbjct 241 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP 300 Query 301 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV 360 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV Sbjct 301 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV 360 Query 361 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA 420 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA Sbjct 361 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA 420 Query 421 WVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 WVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR Sbjct 421 WVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 >gi|31791469|ref|NP_853962.1| transmembrane protein [Mycobacterium bovis AF2122/97] gi|121636205|ref|YP_976428.1| putative transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988678|ref|YP_002643365.1| putative transmembrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31617055|emb|CAD93162.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] gi|121491852|emb|CAL70315.1| Probable conserved transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224771791|dbj|BAH24597.1| putative transmembrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341600221|emb|CCC62891.1| probable conserved transmembrane protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=472 Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust. Identities = 471/472 (99%), Positives = 471/472 (99%), Gaps = 0/472 (0%) Query 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 60 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ Sbjct 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 60 Query 61 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP 120 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP Sbjct 61 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP 120 Query 121 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP 180 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP Sbjct 121 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP 180 Query 181 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF 240 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF Sbjct 181 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF 240 Query 241 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP 300 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP Sbjct 241 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP 300 Query 301 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV 360 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV Sbjct 301 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV 360 Query 361 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA 420 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYT TGRYVAAFGAVLVLAVLMLA Sbjct 361 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTTTGRYVAAFGAVLVLAVLMLA 420 Query 421 WVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 WVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR Sbjct 421 WVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 >gi|289748061|ref|ZP_06507439.1| transmembrane protein [Mycobacterium tuberculosis 02_1987] gi|294995048|ref|ZP_06800739.1| hypothetical protein Mtub2_11185 [Mycobacterium tuberculosis 210] gi|289688589|gb|EFD56077.1| transmembrane protein [Mycobacterium tuberculosis 02_1987] gi|326906045|gb|EGE52978.1| conserved membrane protein [Mycobacterium tuberculosis W-148] gi|339296995|gb|AEJ49105.1| transmembrane protein [Mycobacterium tuberculosis CCDC5180] Length=472 Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust. Identities = 470/472 (99%), Positives = 471/472 (99%), Gaps = 0/472 (0%) Query 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 60 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ Sbjct 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 60 Query 61 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP 120 LSLAPVGGQPFSLDA+LDTVGVVDGDLLVLQPVP GPAAPGIVEDIADAAMIFSTSRLKP Sbjct 61 LSLAPVGGQPFSLDANLDTVGVVDGDLLVLQPVPTGPAAPGIVEDIADAAMIFSTSRLKP 120 Query 121 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP 180 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP Sbjct 121 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP 180 Query 181 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF 240 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF Sbjct 181 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF 240 Query 241 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP 300 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP Sbjct 241 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP 300 Query 301 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV 360 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV Sbjct 301 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV 360 Query 361 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA 420 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA Sbjct 361 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA 420 Query 421 WVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 WVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR Sbjct 421 WVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 >gi|340625328|ref|YP_004743780.1| hypothetical protein MCAN_02991 [Mycobacterium canettii CIPT 140010059] gi|340003518|emb|CCC42639.1| putative conserved transmembrane protein [Mycobacterium canettii CIPT 140010059] Length=472 Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust. Identities = 471/472 (99%), Positives = 472/472 (100%), Gaps = 0/472 (0%) Query 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 60 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ Sbjct 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 60 Query 61 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP 120 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP Sbjct 61 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP 120 Query 121 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP 180 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP Sbjct 121 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP 180 Query 181 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF 240 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF Sbjct 181 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF 240 Query 241 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP 300 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP Sbjct 241 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP 300 Query 301 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV 360 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV Sbjct 301 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV 360 Query 361 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA 420 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA Sbjct 361 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA 420 Query 421 WVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 WVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPV+AYLVGLFAWVLNR Sbjct 421 WVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVIAYLVGLFAWVLNR 472 >gi|306782918|ref|ZP_07421240.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|308332247|gb|EFP21098.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] Length=472 Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust. Identities = 471/472 (99%), Positives = 471/472 (99%), Gaps = 0/472 (0%) Query 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 60 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ Sbjct 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 60 Query 61 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP 120 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP Sbjct 61 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP 120 Query 121 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP 180 WGIAHIQR ALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP Sbjct 121 WGIAHIQREALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP 180 Query 181 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF 240 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF Sbjct 181 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF 240 Query 241 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP 300 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP Sbjct 241 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP 300 Query 301 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV 360 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV Sbjct 301 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV 360 Query 361 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA 420 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA Sbjct 361 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA 420 Query 421 WVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 WVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR Sbjct 421 WVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 >gi|298523761|ref|ZP_07011170.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298493555|gb|EFI28849.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=558 Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust. Identities = 426/428 (99%), Positives = 427/428 (99%), Gaps = 0/428 (0%) Query 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 60 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ Sbjct 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 60 Query 61 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP 120 LSLAPVGGQPFSLDA+LDTVGVVDGDLLVLQPVP GPAAPGIVEDIADAAMIFSTSRLKP Sbjct 61 LSLAPVGGQPFSLDANLDTVGVVDGDLLVLQPVPTGPAAPGIVEDIADAAMIFSTSRLKP 120 Query 121 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP 180 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP Sbjct 121 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP 180 Query 181 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF 240 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF Sbjct 181 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF 240 Query 241 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP 300 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP Sbjct 241 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP 300 Query 301 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV 360 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV Sbjct 301 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV 360 Query 361 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA 420 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA Sbjct 361 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA 420 Query 421 WVVVALNP 428 WVVVALNP Sbjct 421 WVVVALNP 428 >gi|240172732|ref|ZP_04751391.1| transmembrane protein [Mycobacterium kansasii ATCC 12478] Length=472 Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust. Identities = 398/472 (85%), Positives = 428/472 (91%), Gaps = 0/472 (0%) Query 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 60 MSGTVM IVRVAILADSRLTEMALPAELPLREILPAVQRLV+P+A+NGDGG+A SGAA Sbjct 1 MSGTVMPIVRVAILADSRLTEMALPAELPLREILPAVQRLVIPAAENGDGGEAGSGAAAH 60 Query 61 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP 120 LSLAP+GG PFSLDASLDTVGVVDGDLL LQPVP GPAAPGIVEDIADAAMIFS+SRL P Sbjct 61 LSLAPIGGAPFSLDASLDTVGVVDGDLLALQPVPTGPAAPGIVEDIADAAMIFSSSRLNP 120 Query 121 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP 180 WG HIQRGALAAVI V L+ATGL V+YRVATG LAGL+ V+GIAV ALAGLL+T RSP Sbjct 121 WGPKHIQRGALAAVIGVTLVATGLAVSYRVATGALAGLVTVSGIAVVLALAGLLVTARSP 180 Query 181 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF 240 R+G A+SIAALVPI ALALAVPGKFGPAQ+LL AAGV AWSLI LM+PSAERER+VAFF Sbjct 181 RTGTAVSIAALVPIAGALALAVPGKFGPAQLLLAAAGVTAWSLICLMVPSAERERIVAFF 240 Query 241 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP 300 TA AV A V LAAGA+LLW+LP+ S+GCGLIV ALL+TIQAAQLSALWARFPLPVIPAP Sbjct 241 TAVAVTAAGVWLAAGAELLWELPMRSVGCGLIVTALLITIQAAQLSALWARFPLPVIPAP 300 Query 301 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV 360 GDPTPSAP LR+LEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPE++ VGWY+V Sbjct 301 GDPTPSAPSLRVLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPESVGGVGWYVV 360 Query 361 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA 420 AATAA LRARVWDSA CKAWLLAQP+LVAG+LLV YTATGRYVAA GAVLVLAVL+ A Sbjct 361 AATAAVTALRARVWDSATCKAWLLAQPHLVAGILLVVYTATGRYVAALGAVLVLAVLVFA 420 Query 421 WVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 W+VVALNP IASP+SYSLPLRRLLG VAAGLDVSLIPVMAYLVGLF WVLNR Sbjct 421 WIVVALNPAIASPDSYSLPLRRLLGFVAAGLDVSLIPVMAYLVGLFTWVLNR 472 >gi|118616926|ref|YP_905258.1| transmembrane protein [Mycobacterium ulcerans Agy99] gi|118569036|gb|ABL03787.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99] Length=472 Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/472 (82%), Positives = 419/472 (89%), Gaps = 0/472 (0%) Query 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 60 MSGTVM IVRVAILADSRLTE+ALPAELPLREILPAVQRLV+P A++GD G AD G A Sbjct 1 MSGTVMPIVRVAILADSRLTEVALPAELPLREILPAVQRLVIPVAEDGDAGSADLGIAGH 60 Query 61 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP 120 LSLAPVGG PFSLDASLDTVGVVDGDLLVLQPVP GPAAPGIVEDIADAAMIFSTSRL+P Sbjct 61 LSLAPVGGAPFSLDASLDTVGVVDGDLLVLQPVPTGPAAPGIVEDIADAAMIFSTSRLRP 120 Query 121 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP 180 W H+QRGALAA+I VAL +GL V YRVATG LAGLL V+ IAVA ALAGLL+ RSP Sbjct 121 WDARHLQRGALAALIGVALAGSGLAVAYRVATGALAGLLIVSVIAVAMALAGLLLGARSP 180 Query 181 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF 240 R+GIALSIAAL P+GAALALAVPG FG AQVLL AAGV AWSLI LM+P +RER+VA F Sbjct 181 RTGIALSIAALAPVGAALALAVPGSFGAAQVLLAAAGVTAWSLICLMVPGEQRERIVALF 240 Query 241 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP 300 TA AVVGA++ LAAG +LLWQLP+ SIGCGLIVAALLVTIQAAQLSA+WARFPLPVIPAP Sbjct 241 TAVAVVGAALLLAAGVELLWQLPVSSIGCGLIVAALLVTIQAAQLSAVWARFPLPVIPAP 300 Query 301 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV 360 GDPTPSAP LR+LEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIA+RP+ +S +GWY+V Sbjct 301 GDPTPSAPSLRVLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIALRPDTVSALGWYVV 360 Query 361 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA 420 AATAA ATLRAR+WDSAACKAWLL QPYLV G LLV Y ATG ++AAFGA++VLAVL +A Sbjct 361 AATAATATLRARIWDSAACKAWLLTQPYLVGGTLLVLYAATGHFIAAFGALVVLAVLAVA 420 Query 421 WVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 WVVVALNP IASPESYSLPLRRLLG +AAGLD SLIPVMAYL GLF WVLNR Sbjct 421 WVVVALNPVIASPESYSLPLRRLLGFLAAGLDASLIPVMAYLAGLFTWVLNR 472 >gi|118465427|ref|YP_883986.1| hypothetical protein MAV_4863 [Mycobacterium avium 104] gi|118166714|gb|ABK67611.1| conserved hypothetical protein [Mycobacterium avium 104] Length=480 Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust. Identities = 381/478 (80%), Positives = 419/478 (88%), Gaps = 7/478 (1%) Query 2 SGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDG-------GQAD 54 SGTVM IVRVAILADSRLTEMALPAELPLREILPAVQRLVVP+A NGD G A+ Sbjct 3 SGTVMPIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPAAANGDSEDGAPSRGAAE 62 Query 55 SGAAVQLSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFS 114 G AVQLSLAP+GG PFSLDASLDTVGVVDGDLL LQPVPAGPAAPGIVEDIADAAMIFS Sbjct 63 VGGAVQLSLAPIGGAPFSLDASLDTVGVVDGDLLALQPVPAGPAAPGIVEDIADAAMIFS 122 Query 115 TSRLKPWGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLL 174 TSRL+PWG HIQR ALA VIAVALLATGL+V+YRVATG LAGL+AV+ +A +A+ GLL Sbjct 123 TSRLRPWGTTHIQRFALATVIAVALLATGLSVSYRVATGALAGLVAVSAVAALTAIVGLL 182 Query 175 ITIRSPRSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERE 234 T RSPR+G+ALSIAALVPIGAALALAVPG+FGPAQV+L AAGV AWSLIALM PSAERE Sbjct 183 ATARSPRNGMALSIAALVPIGAALALAVPGRFGPAQVMLAAAGVTAWSLIALMAPSAERE 242 Query 235 RVVAFFTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPL 294 R+ FFTA AV+GA+V LAAGA+LLW + +++GCGLIVAALLVT++AA LSALWARFPL Sbjct 243 RLAGFFTATAVLGAAVLLAAGAELLWHITPVALGCGLIVAALLVTVEAAPLSALWARFPL 302 Query 295 PVIPAPGDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSV 354 PVIPAPGDPTPSAPPL +LEDLPRRVR+ DAHQSGFIAAAVLLS LGSVAIA+RPE LS Sbjct 303 PVIPAPGDPTPSAPPLPVLEDLPRRVRIGDAHQSGFIAAAVLLSALGSVAIALRPETLSA 362 Query 355 VGWYLVAATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVL 414 GWY+V ATAA + LRARVWDSAACKAWLLAQPYL AGVLLV YTATGRY A GAVLVL Sbjct 363 AGWYVVGATAATSVLRARVWDSAACKAWLLAQPYLAAGVLLVLYTATGRYAGALGAVLVL 422 Query 415 AVLMLAWVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 L+ W+VVALNPGIA+PESYSLP+RRL+G VA GLD SLIPVMA++VGLF WVL+R Sbjct 423 LALVAVWIVVALNPGIAAPESYSLPVRRLVGFVATGLDASLIPVMAFVVGLFGWVLDR 480 >gi|254821602|ref|ZP_05226603.1| hypothetical protein MintA_16832 [Mycobacterium intracellulare ATCC 13950] Length=480 Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/478 (80%), Positives = 419/478 (88%), Gaps = 7/478 (1%) Query 2 SGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDG-------GQAD 54 SGTVM IVRVAILADSRLTEMALPAELPLREILPAVQRLVVP+ NGDG G A+ Sbjct 3 SGTVMPIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPATANGDGEDASGSRGAAE 62 Query 55 SGAAVQLSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFS 114 G A QLSLAP+GG PFSLDASLDTVGVVDGDLL LQPVPAGPAAPGIVEDIADAAMIFS Sbjct 63 VGGATQLSLAPIGGAPFSLDASLDTVGVVDGDLLALQPVPAGPAAPGIVEDIADAAMIFS 122 Query 115 TSRLKPWGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLL 174 TSRLKPWG HIQRGALAA IAVA LATGL+VTYRVATG L+GL+AV+ +A +A+ GLL Sbjct 123 TSRLKPWGTTHIQRGALAAAIAVAFLATGLSVTYRVATGALSGLVAVSAVAALTAIVGLL 182 Query 175 ITIRSPRSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERE 234 +T RS R+G ALSIAALVPI AAL LAVPG+FGPAQV+L AAGV AWSLIALM+PSAERE Sbjct 183 VTARSARTGTALSIAALVPIAAALVLAVPGRFGPAQVMLAAAGVTAWSLIALMVPSAERE 242 Query 235 RVVAFFTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPL 294 R+ FFTA AV+GA+V LAAGA+LLW + L++IGCGLIVAALLVTI+AAQ+SALWARFPL Sbjct 243 RIAGFFTATAVLGAAVLLAAGAELLWHVKLVAIGCGLIVAALLVTIEAAQMSALWARFPL 302 Query 295 PVIPAPGDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSV 354 PVIPAPGDPTPSAP L++LEDLPRRVR+SDAHQSGFIAAAVLLSVLGSVAIA+RPE LS Sbjct 303 PVIPAPGDPTPSAPSLQVLEDLPRRVRISDAHQSGFIAAAVLLSVLGSVAIALRPETLSG 362 Query 355 VGWYLVAATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVL 414 GWY+V ATAAA+ LRARVWDSAACKAWLLAQP+L AGVLLV Y ATGRY AA GA +VL Sbjct 363 AGWYVVGATAAASVLRARVWDSAACKAWLLAQPFLAAGVLLVIYAATGRYGAALGAAVVL 422 Query 415 AVLMLAWVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 L+ W+V+ALNPGIA PESYSLP+RRL+G AAGLD SLIPVMA++VGLF+ VLNR Sbjct 423 LALVAVWIVLALNPGIAEPESYSLPVRRLVGFAAAGLDASLIPVMAFVVGLFSLVLNR 480 >gi|183980577|ref|YP_001848868.1| transmembrane protein [Mycobacterium marinum M] gi|183173903|gb|ACC39013.1| conserved transmembrane protein [Mycobacterium marinum M] Length=472 Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/472 (82%), Positives = 420/472 (89%), Gaps = 0/472 (0%) Query 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 60 MSGTVM IVRVAILADSRLTE+ALPAELPLREILPAVQRLV+P A++GD G AD G A Sbjct 1 MSGTVMPIVRVAILADSRLTEVALPAELPLREILPAVQRLVIPVAEDGDAGSADLGIAGH 60 Query 61 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP 120 LSLAPVGG PFSLDASLDTVGVVDGDLLVLQPVP GPAAPGIVEDIADAAMIFSTSRL+P Sbjct 61 LSLAPVGGAPFSLDASLDTVGVVDGDLLVLQPVPTGPAAPGIVEDIADAAMIFSTSRLRP 120 Query 121 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP 180 W H+QRGALAA+I VAL +GL V YR ATG LAGLL V+ IAVA ALAGLL+ RSP Sbjct 121 WDARHLQRGALAALIGVALAGSGLAVAYRAATGALAGLLIVSVIAVAMALAGLLLGARSP 180 Query 181 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF 240 R+GIALSIAAL P+GAALALAVPG FG AQVLL AAGV AWSLI LM+P +RER+VA F Sbjct 181 RTGIALSIAALAPVGAALALAVPGSFGAAQVLLAAAGVTAWSLICLMVPGEQRERIVALF 240 Query 241 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP 300 TA AVVGA++ LAAGA+LLWQLP+ SIGCGLIVAALLVTIQAAQLSA+WARFPLPVIPAP Sbjct 241 TAVAVVGAALLLAAGAELLWQLPVSSIGCGLIVAALLVTIQAAQLSAVWARFPLPVIPAP 300 Query 301 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV 360 GDPTPSAP LR+LEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIA+RP+ +S +GWY+V Sbjct 301 GDPTPSAPSLRVLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIALRPDTVSALGWYVV 360 Query 361 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA 420 AATAA ATLRAR+WDSAACKAWLL QPYLV G LLV Y ATG ++AAFGA++VLAVL +A Sbjct 361 AATAATATLRARIWDSAACKAWLLTQPYLVGGTLLVLYAATGHFIAAFGALVVLAVLAVA 420 Query 421 WVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 WVVVALNP IASPESYSLPLRRLLG +AAGLD SLIPVMAYLVGLF WVLNR Sbjct 421 WVVVALNPVIASPESYSLPLRRLLGFLAAGLDASLIPVMAYLVGLFTWVLNR 472 >gi|41409884|ref|NP_962720.1| hypothetical protein MAP3786 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398716|gb|AAS06336.1| hypothetical protein MAP_3786 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336460255|gb|EGO39158.1| type VII secretion integral membrane protein EccD [Mycobacterium avium subsp. paratuberculosis S397] Length=480 Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/478 (81%), Positives = 421/478 (89%), Gaps = 7/478 (1%) Query 2 SGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDG-------GQAD 54 SGTVM IVRVAILADSRLTEMALPAELPLREILPAVQRLVVP+A NGD G A+ Sbjct 3 SGTVMPIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPAAANGDSEDGAPSRGAAE 62 Query 55 SGAAVQLSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFS 114 G AVQLSLAP+GG PFSLDASLDTVGVVDGDLL LQPVPAGPAAPGIVEDIADAAMIFS Sbjct 63 VGGAVQLSLAPIGGAPFSLDASLDTVGVVDGDLLALQPVPAGPAAPGIVEDIADAAMIFS 122 Query 115 TSRLKPWGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLL 174 TSRL+PWG HIQR ALAAVIAVALLATGL+V+YRVATG LAGL+AV+ +A +A+ GLL Sbjct 123 TSRLRPWGTTHIQRFALAAVIAVALLATGLSVSYRVATGALAGLVAVSAVAALTAIVGLL 182 Query 175 ITIRSPRSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERE 234 T RSPR+G+ALSIAALVPIGAALALAVPG+FGPAQV+L AAGV AWSLIALM PSAERE Sbjct 183 ATARSPRTGMALSIAALVPIGAALALAVPGRFGPAQVMLAAAGVTAWSLIALMAPSAERE 242 Query 235 RVVAFFTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPL 294 R+ FFTA AV+GA+V LAAGA+LLW + +++GCGLIVAALLVT++AA LSALWARFPL Sbjct 243 RLAGFFTATAVLGAAVLLAAGAELLWHITPVALGCGLIVAALLVTVEAAPLSALWARFPL 302 Query 295 PVIPAPGDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSV 354 PVIPAPGDPTPSAPPL +LEDLPRRVR+ DAHQSGFIAAAVLLSVLGSVAIA+RPE LS Sbjct 303 PVIPAPGDPTPSAPPLPVLEDLPRRVRIGDAHQSGFIAAAVLLSVLGSVAIALRPETLSA 362 Query 355 VGWYLVAATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVL 414 GWY+V ATAA + LRARVWDSAACKAWLLAQPYL AGVLLV YTATGRY A GAVLVL Sbjct 363 AGWYVVGATAATSVLRARVWDSAACKAWLLAQPYLAAGVLLVLYTATGRYAGALGAVLVL 422 Query 415 AVLMLAWVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 L+ W+VVALNPGIA+PESYSLP+RRL+G VA GLD SLIPVMA++VGLF WVL+R Sbjct 423 LALVAVWIVVALNPGIAAPESYSLPVRRLVGFVATGLDASLIPVMAFVVGLFGWVLDR 480 >gi|342859226|ref|ZP_08715880.1| hypothetical protein MCOL_10118 [Mycobacterium colombiense CECT 3035] gi|342133467|gb|EGT86670.1| hypothetical protein MCOL_10118 [Mycobacterium colombiense CECT 3035] Length=480 Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/478 (79%), Positives = 409/478 (86%), Gaps = 7/478 (1%) Query 2 SGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAA--- 58 SGTVM IVRVAILADSRLTEMALPAELPLREILPAVQRLVVP+A NGD G +G Sbjct 3 SGTVMPIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPAATNGDSGDGAAGRGAAE 62 Query 59 ----VQLSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFS 114 QLSLAP+GG PFSLDASLDTVGVVDGDLL LQ VP GPAAPGIVEDIADAAMIFS Sbjct 63 IGAATQLSLAPIGGAPFSLDASLDTVGVVDGDLLALQAVPVGPAAPGIVEDIADAAMIFS 122 Query 115 TSRLKPWGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLL 174 TSR+KPWG HIQRGAL A IAVA LATGL+VTYRVATG L GL+AV+ +A +A+ GLL Sbjct 123 TSRIKPWGATHIQRGALVAAIAVAFLATGLSVTYRVATGALLGLVAVSAVAALTAIVGLL 182 Query 175 ITIRSPRSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERE 234 +T RS R+G+ALSIAAL I AALALAVPG+FGPAQV L AAGV AWSLIALM PSAERE Sbjct 183 VTARSARTGMALSIAALPLIAAALALAVPGRFGPAQVTLAAAGVTAWSLIALMAPSAERE 242 Query 235 RVVAFFTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPL 294 R+ FFTA AVVGA V LAAGA+LLW L L++IGCGLIVAALLVTI+A QLSALWARFPL Sbjct 243 RIAGFFTATAVVGAGVLLAAGAELLWHLTLIAIGCGLIVAALLVTIEAPQLSALWARFPL 302 Query 295 PVIPAPGDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSV 354 PVIPAPGDPTPSAP LR+LEDLPRRVR+SDAHQSGFIAAAVLLSVLGSVAIA+RPE LS Sbjct 303 PVIPAPGDPTPSAPSLRVLEDLPRRVRISDAHQSGFIAAAVLLSVLGSVAIALRPETLSG 362 Query 355 VGWYLVAATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVL 414 GWY+VAATAA + LRARVWDSAACKAWLLAQP+L AG LLV YT+TGRY A GA LVL Sbjct 363 AGWYVVAATAATSVLRARVWDSAACKAWLLAQPFLAAGTLLVLYTSTGRYAGALGAALVL 422 Query 415 AVLMLAWVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 VL+ W+VVALNPGIA+PESYSLP+RRL+G A GLD SLIPVMA++VGLF WVLNR Sbjct 423 LVLVAVWIVVALNPGIAAPESYSLPVRRLVGFAATGLDASLIPVMAFVVGLFGWVLNR 480 >gi|254777303|ref|ZP_05218819.1| hypothetical protein MaviaA2_21901 [Mycobacterium avium subsp. avium ATCC 25291] Length=474 Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/474 (80%), Positives = 416/474 (88%), Gaps = 7/474 (1%) Query 6 MQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDG-------GQADSGAA 58 M IVRVAILADSRLTEMALPAELPLREILPAVQRLVVP+A NGD G A+ G A Sbjct 1 MPIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPAAANGDSEDGAPSRGAAEVGGA 60 Query 59 VQLSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRL 118 VQLSLAP+GG PFSLDASLDTVGVVDGDLL LQPVPAGPAAPGIVEDIADAAMIFSTSRL Sbjct 61 VQLSLAPIGGAPFSLDASLDTVGVVDGDLLALQPVPAGPAAPGIVEDIADAAMIFSTSRL 120 Query 119 KPWGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIR 178 +PWG HIQR ALAAVIAVALLATGL+V+YRVATG L GL+AV+ +A +A+ GLL T R Sbjct 121 RPWGTTHIQRFALAAVIAVALLATGLSVSYRVATGALGGLVAVSAVAALTAIVGLLATAR 180 Query 179 SPRSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVA 238 SPR+G+ALSIAALVPIGAALALAVPG+FGPAQV+L AAGV AWSLIALM PSAERER+ Sbjct 181 SPRTGMALSIAALVPIGAALALAVPGRFGPAQVMLAAAGVTAWSLIALMAPSAERERLAG 240 Query 239 FFTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIP 298 FFTA AV+GA+V LAAGA+LLW + +++GCGLIVAALLVT++AA LSALWARFPLPVIP Sbjct 241 FFTATAVLGAAVLLAAGAELLWHITPVALGCGLIVAALLVTVEAAPLSALWARFPLPVIP 300 Query 299 APGDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWY 358 APGDPTPSAPPL +LEDLPRRVR+ DAHQSGFIAAAVLLSVLGSVAIA+RPE LS GWY Sbjct 301 APGDPTPSAPPLPVLEDLPRRVRIGDAHQSGFIAAAVLLSVLGSVAIALRPETLSAAGWY 360 Query 359 LVAATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLM 418 +V ATAA + LRARVWDSAACKAWLLAQPYL AGVLLV YTATGRY A GAVLVL L+ Sbjct 361 VVGATAATSVLRARVWDSAACKAWLLAQPYLAAGVLLVLYTATGRYAGALGAVLVLLALV 420 Query 419 LAWVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 W+VVALNPGIA+PESYSLP+RRL+G VA GLD SLIPVMA++VGLF WVL+R Sbjct 421 AVWIVVALNPGIAAPESYSLPVRRLVGFVATGLDASLIPVMAFVVGLFGWVLDR 474 >gi|289756356|ref|ZP_06515734.1| LOW QUALITY PROTEIN: transmembrane protein [Mycobacterium tuberculosis T85] gi|289711920|gb|EFD75932.1| LOW QUALITY PROTEIN: transmembrane protein [Mycobacterium tuberculosis T85] Length=386 Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/369 (97%), Positives = 359/369 (98%), Gaps = 7/369 (1%) Query 104 EDIADAAMIFSTSRLKPWGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAG 163 +D+ D A+ K WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAG Sbjct 25 DDLFDVAV-------KAWGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAG 77 Query 164 IAVASALAGLLITIRSPRSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSL 223 IAVASALAGLLITIRSPRSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSL Sbjct 78 IAVASALAGLLITIRSPRSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSL 137 Query 224 IALMIPSAERERVVAFFTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAA 283 IALMIPSAERERVVAFFTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAA Sbjct 138 IALMIPSAERERVVAFFTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAA 197 Query 284 QLSALWARFPLPVIPAPGDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSV 343 QLSALWARFPLPVIPAPGDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSV Sbjct 198 QLSALWARFPLPVIPAPGDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSV 257 Query 344 AIAVRPEALSVVGWYLVAATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGR 403 AIAVRPEALSVVGWYLVAATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGR Sbjct 258 AIAVRPEALSVVGWYLVAATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGR 317 Query 404 YVAAFGAVLVLAVLMLAWVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLV 463 YVAAFGAVLVLAVLMLAWVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLV Sbjct 318 YVAAFGAVLVLAVLMLAWVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLV 377 Query 464 GLFAWVLNR 472 GLFAWVLNR Sbjct 378 GLFAWVLNR 386 >gi|339293348|gb|AEJ45459.1| transmembrane protein [Mycobacterium tuberculosis CCDC5079] Length=339 Score = 619 bits (1597), Expect = 3e-175, Method: Compositional matrix adjust. Identities = 338/339 (99%), Positives = 339/339 (100%), Gaps = 0/339 (0%) Query 134 VIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSPRSGIALSIAALVP 193 +IAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSPRSGIALSIAALVP Sbjct 1 MIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSPRSGIALSIAALVP 60 Query 194 IGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFFTAAAVVGASVALA 253 IGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFFTAAAVVGASVALA Sbjct 61 IGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFFTAAAVVGASVALA 120 Query 254 AGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAPGDPTPSAPPLRLL 313 AGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAPGDPTPSAPPLRLL Sbjct 121 AGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAPGDPTPSAPPLRLL 180 Query 314 EDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLVAATAAAATLRARV 373 EDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLVAATAAAATLRARV Sbjct 181 EDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLVAATAAAATLRARV 240 Query 374 WDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLAWVVVALNPGIASP 433 WDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLAWVVVALNPGIASP Sbjct 241 WDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLAWVVVALNPGIASP 300 Query 434 ESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 ESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR Sbjct 301 ESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 339 >gi|15828361|ref|NP_302624.1| hypothetical protein ML2529 [Mycobacterium leprae TN] gi|221230838|ref|YP_002504254.1| hypothetical protein MLBr_02529 [Mycobacterium leprae Br4923] gi|13093791|emb|CAC32060.1| conserved membrane protein [Mycobacterium leprae] gi|219933945|emb|CAR72628.1| conserved membrane protein [Mycobacterium leprae Br4923] Length=485 Score = 607 bits (1566), Expect = 1e-171, Method: Compositional matrix adjust. Identities = 360/471 (77%), Positives = 398/471 (85%), Gaps = 1/471 (0%) Query 2 SGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQL 61 SG VM IVRVAILADSRL EMALP ELPLREILPAV+RLVVP+A + D A + A++ L Sbjct 16 SGAVMPIVRVAILADSRLIEMALPTELPLREILPAVKRLVVPAASDNDSPLA-ANASLHL 74 Query 62 SLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKPW 121 SLAP+GG PFSLDASLDTVGVVDGDLL LQPVP GPAAPGIVEDIADAAMIFST+RL+ W Sbjct 75 SLAPIGGAPFSLDASLDTVGVVDGDLLALQPVPVGPAAPGIVEDIADAAMIFSTARLQSW 134 Query 122 GIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSPR 181 G HI+RGALAA AV ATGL VTYR TG L GLL V IAV AL GL++ R+ R Sbjct 135 GPTHIRRGALAATTAVTFAATGLGVTYRAVTGALTGLLVVIVIAVLIALGGLVLRSRAAR 194 Query 182 SGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFFT 241 +G+ LSIAALVPIGA ALAVPG FGPAQVLL +AGV AWSLIAL++P ER R+VAFFT Sbjct 195 TGLVLSIAALVPIGAVFALAVPGIFGPAQVLLASAGVTAWSLIALIVPGPERVRIVAFFT 254 Query 242 AAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAPG 301 A V+G +V L AGA LLWQL L+IGCGLI+AALLVT++AAQLSALWARFPLPVIPAPG Sbjct 255 ATVVIGVAVMLEAGAALLWQLTPLTIGCGLILAALLVTVEAAQLSALWARFPLPVIPAPG 314 Query 302 DPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLVA 361 DPTPSAP ++LEDLPRRVR+S AHQSGFIAAA LLS+LGSVAIA+RPEA+S VGWYLVA Sbjct 315 DPTPSAPSFQVLEDLPRRVRISSAHQSGFIAAATLLSMLGSVAIALRPEAVSSVGWYLVA 374 Query 362 ATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLAW 421 ATA AATLRARVWDS ACKAWLLAQPYLVA VLL YTATGRYVAA A+LVL V++LAW Sbjct 375 ATAVAATLRARVWDSVACKAWLLAQPYLVASVLLGLYTATGRYVAASAALLVLVVVVLAW 434 Query 422 VVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 VVALNP IAS +SYSLPLRRLLG+VA+GLD SLIP MAYLV LF+WVLNR Sbjct 435 AVVALNPRIASSDSYSLPLRRLLGMVASGLDASLIPAMAYLVSLFSWVLNR 485 >gi|333988938|ref|YP_004521552.1| transmembrane protein [Mycobacterium sp. JDM601] gi|333484906|gb|AEF34298.1| transmembrane protein [Mycobacterium sp. JDM601] Length=480 Score = 525 bits (1351), Expect = 9e-147, Method: Compositional matrix adjust. Identities = 317/474 (67%), Positives = 369/474 (78%), Gaps = 2/474 (0%) Query 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVP-SAQNGDGGQADSGAAV 59 ++ M IVR+A+LAD RLTE+A+PAELPLREILPAVQRLV P S + D +G Sbjct 7 LTSAAMPIVRIAVLADRRLTEIAVPAELPLREILPAVQRLVAPDSGDSADSADPGTGVTT 66 Query 60 QLSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLK 119 +LSLAPVGG PFSLDASLDTVGVVDGDLL L+PVP GPAAPGIVEDIADAA+IFS SR K Sbjct 67 RLSLAPVGGAPFSLDASLDTVGVVDGDLLALRPVPVGPAAPGIVEDIADAAVIFSASRRK 126 Query 120 PWGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRS 179 PWG HI+RGALAA A+ ATGL +R TG AGLLA IA+ + LA LL RS Sbjct 127 PWGGNHIRRGALAAGAALIFAATGLATAHRALTGEPAGLLATVAIALVAVLAALLCRTRS 186 Query 180 PRSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIP-SAERERVVA 238 + + LSIAALVP+ AA LAVPG F PA V+LGAA V+AWSLI L++P ER +A Sbjct 187 AEAALTLSIAALVPVAAAGTLAVPGLFSPAHVVLGAAAVSAWSLICLILPPGGGGERGIA 246 Query 239 FFTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIP 298 FFTAA V G V AA + W+LP LS+GCGLI A+LL+T+ A QLSALWAR PLPVIP Sbjct 247 FFTAAVVAGVGVLAAAAVKTFWELPFLSLGCGLITASLLLTVAAPQLSALWARLPLPVIP 306 Query 299 APGDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWY 358 APGDPTPSA P R+LEDLPRRVRV+DAHQ+GF+A AVLL+VLGSVAIA PE LS WY Sbjct 307 APGDPTPSALPQRVLEDLPRRVRVTDAHQTGFVAGAVLLAVLGSVAIAFAPEGLSGWAWY 366 Query 359 LVAATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLM 418 +VA A A+ LRARVWDSA CKAWLLAQP+L A VLL Y ATGR+ AAFGAV+VLA L+ Sbjct 367 VVAGIALASVLRARVWDSAWCKAWLLAQPHLTAVVLLACYAATGRFAAAFGAVVVLAALV 426 Query 419 LAWVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 WVVVAL+P +ASP+SYSLP+RRL+G +A+G+D +LIPVMAYLVG+FAWVL+R Sbjct 427 AVWVVVALSPTVASPDSYSLPVRRLVGFLASGVDATLIPVMAYLVGIFAWVLSR 480 >gi|120401445|ref|YP_951274.1| hypothetical protein Mvan_0420 [Mycobacterium vanbaalenii PYR-1] gi|119954263|gb|ABM11268.1| protein of unknown function DUF571 [Mycobacterium vanbaalenii PYR-1] Length=485 Score = 467 bits (1202), Expect = 2e-129, Method: Compositional matrix adjust. Identities = 294/487 (61%), Positives = 353/487 (73%), Gaps = 28/487 (5%) Query 1 MSGTVMQIVRVAIL---------AD--SRLTEMALPAELPLREILPAVQRLVVPSAQNGD 49 ++G VM IVRVA+L AD R+TE+ALPA+LPLREI+PAVQR+V PS + Sbjct 9 LAGVVMPIVRVAVLTAAVGDEAAADRTGRITEIALPADLPLREIVPAVQRIVAPSDDS-- 66 Query 50 GGQADSGAAVQLSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADA 109 +G A QLSLAP+GG PFSLDA+L+TVGVVDGDLL LQPVPAGP AP IVEDIADA Sbjct 67 -----AGGAEQLSLAPIGGAPFSLDATLNTVGVVDGDLLALQPVPAGPPAPRIVEDIADA 121 Query 110 AMIFSTSRLKPWGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASA 169 AMIFS SR KPWG+A+I+ GA AAVI + ++AT L V +RV T L GL AV+ +A+ + Sbjct 122 AMIFSASREKPWGVANIRSGATAAVIGLTVVATALAVAHRVFTDSLIGLFAVSAVAIGAV 181 Query 170 LAGLLITIRSPRSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIP 229 L LL SPR AL+ AAL + AA LAVPG FG + ++LGAAGVAAWS+I++ + Sbjct 182 LGALLARASSPRLATALAAAALPSVAAAFTLAVPGDFGASNIVLGAAGVAAWSVISITV- 240 Query 230 SAERERVVAFFTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALW 289 ER +A FTAAA V L + +W L + +GC LI+A L+VT+QAAQLSA+ Sbjct 241 ---GERAIALFTAAAASALGVLLVSAVASVWTLTPVHVGCILILAGLVVTVQAAQLSAMC 297 Query 290 ARFPLPVIPAPGDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRP 349 AR P+PVIPAPGDPTPSAPPLR+LEDLPRR+R SDAHQ+GFIAA VLL V GSV AV P Sbjct 298 ARLPVPVIPAPGDPTPSAPPLRVLEDLPRRIRASDAHQTGFIAAGVLLGVAGSV-FAVWP 356 Query 350 -----EALSVVGWYLVAATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRY 404 + S W LV ATA A LRARVWDSA+CKAWLLAQP+L++ VLL + TGRY Sbjct 357 GVGGDGSASPWAWLLVGATALGAVLRARVWDSASCKAWLLAQPFLMSAVLLGIFAVTGRY 416 Query 405 VAAFGAVLVLAVLMLAWVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVG 464 AA+ + AVL AWVV ALNP IA P++YSLP+RRLLG VAA +D S+IPVMAYLVG Sbjct 417 DAAWWTLGAFAVLAAAWVVAALNPRIAEPQTYSLPMRRLLGFVAAAVDASVIPVMAYLVG 476 Query 465 LFAWVLN 471 LFAW LN Sbjct 477 LFAWALN 483 >gi|169629312|ref|YP_001702961.1| hypothetical protein MAB_2226c [Mycobacterium abscessus ATCC 19977] gi|169241279|emb|CAM62307.1| Conserved hypothetical transmembrane protein [Mycobacterium abscessus] Length=462 Score = 456 bits (1172), Expect = 5e-126, Method: Compositional matrix adjust. Identities = 270/471 (58%), Positives = 335/471 (72%), Gaps = 11/471 (2%) Query 2 SGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQL 61 VM IVRVA+L + +LTE+ALP +LP+R+I+PAV R+V P A Q +L Sbjct 3 DNAVMPIVRVAVLGEEKLTEVALPTQLPMRDIIPAVHRMVAPDATEATTPQ-------RL 55 Query 62 SLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKPW 121 SLAPV G PFS DA+LDTVGVVDGDLL L+P PAGPAAPGIVEDIADAA+IFS SR +PW Sbjct 56 SLAPVNGAPFSADATLDTVGVVDGDLLTLRPTPAGPAAPGIVEDIADAAVIFSESRKRPW 115 Query 122 GIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSPR 181 G HI R V+ + AT L + + + TG L +A +AVA+A+ L+ +RS R Sbjct 116 GAEHIARVGRFGVLGLIAAATILAIVHSIRTGSSLSLAGLAVVAVAAAIGALVAHVRSAR 175 Query 182 SGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFFT 241 G L++AALVPI ALALAVPG +VLLGAAGVAAWSLI L++ +++AFFT Sbjct 176 LGAELAVAALVPIAGALALAVPGSGLAPRVLLGAAGVAAWSLIYLIV----ARQLIAFFT 231 Query 242 AAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAPG 301 A V+ +A AAGA +LW LL +GCGLI+ ALLVT++AAQLSA ARFPLP IPAPG Sbjct 232 ATTVLSLGIAGAAGAHVLWHPSLLVVGCGLIIVALLVTVRAAQLSAFAARFPLPTIPAPG 291 Query 302 DPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLVA 361 D TPSAP + +L+DLPRRV++SD+HQSGFIA A +L++LGS+A+ S WYLVA Sbjct 292 DATPSAPAMSVLKDLPRRVQLSDSHQSGFIAGASILAILGSLAVVGGAAPASPWAWYLVA 351 Query 362 ATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLAW 421 A +A A LRARVWDSA CKAWLLA P+LV+ LLV + RY A A+ VLA+L+ A Sbjct 352 AVSAGAALRARVWDSAVCKAWLLAVPFLVSTALLVIFAVEDRYTGALVALGVLALLVAAV 411 Query 422 VVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 VV NP I ESYSLP RRLLG +A+G+D SL+PV+AYL GLF+W+LNR Sbjct 412 AVVVFNPKIGEAESYSLPSRRLLGFLASGIDASLLPVIAYLTGLFSWILNR 462 >gi|289748773|ref|ZP_06508151.1| transmembrane protein [Mycobacterium tuberculosis T92] gi|289689360|gb|EFD56789.1| transmembrane protein [Mycobacterium tuberculosis T92] Length=286 Score = 452 bits (1163), Expect = 6e-125, Method: Compositional matrix adjust. Identities = 260/273 (96%), Positives = 261/273 (96%), Gaps = 1/273 (0%) Query 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 60 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ Sbjct 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 60 Query 61 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP 120 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP Sbjct 61 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP 120 Query 121 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP 180 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP Sbjct 121 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP 180 Query 181 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF 240 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF Sbjct 181 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF 240 Query 241 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIV 273 TAA G +LLWQLPLLSIGCGLIV Sbjct 241 TAAGCSGRRWRWRR-CELLWQLPLLSIGCGLIV 272 >gi|118471932|ref|YP_885034.1| secretion protein Snm4 [Mycobacterium smegmatis str. MC2 155] gi|118173219|gb|ABK74115.1| secretion protein Snm4 [Mycobacterium smegmatis str. MC2 155] Length=475 Score = 441 bits (1135), Expect = 1e-121, Method: Compositional matrix adjust. Identities = 288/476 (61%), Positives = 344/476 (73%), Gaps = 8/476 (1%) Query 2 SGTVMQIVRVAILA----DSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGA 57 TVM IVRVA+LA RLTEMALP+ELPLREILPAVQR+V P+ +N + Sbjct 3 ENTVMPIVRVAVLAAGDDGGRLTEMALPSELPLREILPAVQRIVQPARENDGAADPAAAP 62 Query 58 A-VQLSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTS 116 V+LSLAP+GG PFSLDA+LDTVGVVDGDLL LQ VP+GP AP IVEDIADAA+IFS + Sbjct 63 NPVRLSLAPIGGAPFSLDATLDTVGVVDGDLLALQAVPSGPPAPRIVEDIADAAVIFSEA 122 Query 117 RLKPWGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLIT 176 R + WG HI RGA A+I + L+ TGL+V +RV TG L G V+GIA+A+ +A L + Sbjct 123 RRRQWGPTHIARGAALALIGLILVGTGLSVAHRVITGDLLGQFIVSGIALATVIAALAVR 182 Query 177 IRSPRSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERV 236 RS +L++ ALVP+ AA AL VPG FG VLL AAGVAAWSLI++ + +R Sbjct 183 NRSAVLATSLAVTALVPVAAAFALGVPGDFGAPNVLLAAAGVAAWSLISMA--GSPDDRG 240 Query 237 VAFFTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPV 296 +A FTA AV G V L AGA LW + IGC L++ L+VT+QAAQLSA+WARFPLPV Sbjct 241 IAVFTATAVTGVGVLLVAGAASLWVISSDVIGCALVLLGLIVTVQAAQLSAMWARFPLPV 300 Query 297 IPAPGDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVG 356 IPAPGDPTP+A PL +L DLPRRVRVS AHQ+G IAA VLL V GSVA+ A S Sbjct 301 IPAPGDPTPAARPLSVLADLPRRVRVSQAHQTGVIAAGVLLGVAGSVALVSSANA-SPWA 359 Query 357 WYLVAATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAV 416 WY+V A AA A LRARVWDSAACKAWLL YL+A LLV + RY AA A+ LAV Sbjct 360 WYIVVAAAAGAALRARVWDSAACKAWLLGHSYLLAVALLVAFVIGDRYQAALWALAALAV 419 Query 417 LMLAWVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 L+L W+V ALNP IASP++YSLP+RR++G +A GLD SLIPVMA LVGLF+ VL+R Sbjct 420 LVLVWIVAALNPKIASPDTYSLPMRRMVGFLATGLDASLIPVMALLVGLFSLVLDR 475 >gi|296167644|ref|ZP_06849915.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897111|gb|EFG76723.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=282 Score = 410 bits (1053), Expect = 3e-112, Method: Compositional matrix adjust. Identities = 227/282 (81%), Positives = 248/282 (88%), Gaps = 0/282 (0%) Query 191 LVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFFTAAAVVGASV 250 LVPIGAALALAVPG+FGPA ++L AAGV AWSL+ALM PSAERER+V FFTA AVVGA V Sbjct 1 LVPIGAALALAVPGRFGPAHIMLAAAGVTAWSLVALMAPSAERERIVGFFTATAVVGAGV 60 Query 251 ALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAPGDPTPSAPPL 310 LAAGA++LW L L+IGCGLIVAALLVTI+AAQLSALWARFPLPVIPAPGDPTPSAP L Sbjct 61 LLAAGAEVLWHLRPLAIGCGLIVAALLVTIEAAQLSALWARFPLPVIPAPGDPTPSAPSL 120 Query 311 RLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLVAATAAAATLR 370 R+LEDLPRRVR+ DAHQ+GFIAAAVLLSVLGSVAIA+RPEA+S VGWY+V ATAA + LR Sbjct 121 RVLEDLPRRVRIGDAHQNGFIAAAVLLSVLGSVAIALRPEAVSGVGWYVVGATAATSVLR 180 Query 371 ARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLAWVVVALNPGI 430 ARVWDSAACKAWLL QP+L AGVLLVFYTAT RY AA GA LVL L WVVVALNP I Sbjct 181 ARVWDSAACKAWLLGQPFLAAGVLLVFYTATARYGAALGAALVLVALAAVWVVVALNPHI 240 Query 431 ASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 A PESYSLP+RRL+G AAGLD SLIPVMAYLVG+F W+LNR Sbjct 241 AEPESYSLPVRRLVGFAAAGLDASLIPVMAYLVGIFTWILNR 282 >gi|145220925|ref|YP_001131603.1| hypothetical protein Mflv_0321 [Mycobacterium gilvum PYR-GCK] gi|145213411|gb|ABP42815.1| protein of unknown function DUF571 [Mycobacterium gilvum PYR-GCK] Length=482 Score = 407 bits (1047), Expect = 2e-111, Method: Compositional matrix adjust. Identities = 285/484 (59%), Positives = 345/484 (72%), Gaps = 26/484 (5%) Query 2 SGTVMQIVRVAILADS----------RLTEMALPAELPLREILPAVQRLVVPSAQNGDGG 51 + T M IVRVA+L + RLTE+ALPA+LPLREI+PAVQR+V PS Sbjct 9 TNTAMPIVRVAVLTATAGDEDGDRAGRLTEIALPAQLPLREIIPAVQRIVAPSD------ 62 Query 52 QADSGAAVQLSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAM 111 D+ +SLAP+GG P+SLDA+L TVGVVDGDLL LQP+PAGP AP IVEDIADAAM Sbjct 63 --DAPGTDPVSLAPIGGAPYSLDATLTTVGVVDGDLLALQPIPAGPPAPRIVEDIADAAM 120 Query 112 IFSTSRLKPWGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALA 171 IFS +R KPWG IQRGA AV+ + L+AT L V +RV T + G+ AV+ +A+A+ L Sbjct 121 IFSAAREKPWGTPQIQRGATVAVVGLMLVATALAVAHRVVTDSIIGVFAVSAVAIAAVLG 180 Query 172 GLLITIRSPRSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSA 231 L+ SPR AL+ AAL +GAA LAVPG FG + VLLGAAG+AAWS+I++ + Sbjct 181 ALVARTGSPRVATALAAAALPSVGAAFTLAVPGDFGASAVLLGAAGIAAWSIISITV--- 237 Query 232 ERERVVAFFTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWAR 291 ER +A FTA A VA+AA A +W L LL IGC LI+ ALL+T+QAAQLSA+ AR Sbjct 238 -GERAIAVFTAVAAAALGVAVAAAAATVWSLSLLDIGCVLILIALLITVQAAQLSAMCAR 296 Query 292 FPLPVIPAPGDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAI---AVR 348 P+PVIPAPGDP PSA P R+LEDLPRR+R DA+Q+GFIAA VLL+V GSV + AV Sbjct 297 LPVPVIPAPGDPAPSALPRRVLEDLPRRIRAGDAYQTGFIAAGVLLAVTGSVLVVWPAVS 356 Query 349 PE-ALSVVGWYLVAATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAA 407 + + V WYLVAATA AA LRARVWDS+ACKAWLL YLV VLLV A +Y AA Sbjct 357 GDGGVPVWSWYLVAATALAAALRARVWDSSACKAWLLGHGYLVTTVLLVLSAAHEKYSAA 416 Query 408 FGAVLVLAVLMLAWVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFA 467 + A+ VLAVL+ AW V ALNP IA P++YSLP+RR++G VA LD S+IPVMAYLVGLF Sbjct 417 WWALGVLAVLVAAWAVAALNPRIAQPDTYSLPMRRVVGFVATALDASVIPVMAYLVGLFT 476 Query 468 WVLN 471 VLN Sbjct 477 LVLN 480 >gi|315442105|ref|YP_004074984.1| secretion protein snm4 [Mycobacterium sp. Spyr1] gi|315260408|gb|ADT97149.1| secretion protein snm4 [Mycobacterium sp. Spyr1] Length=482 Score = 407 bits (1045), Expect = 3e-111, Method: Compositional matrix adjust. Identities = 287/484 (60%), Positives = 345/484 (72%), Gaps = 26/484 (5%) Query 2 SGTVMQIVRVAILADS----------RLTEMALPAELPLREILPAVQRLVVPSAQNGDGG 51 + T M IVRVA+L + RLTE+ALPA+LPLREI+PAVQR+V PS Sbjct 9 TNTAMPIVRVAVLTATAGDEDGDRTGRLTEIALPAQLPLREIIPAVQRIVAPSD------ 62 Query 52 QADSGAAVQLSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAM 111 D+ +SLAP+GG P+SLDA+L TVGVVDGDLL LQPVPAGP AP IVEDIADAAM Sbjct 63 --DAPGTDPVSLAPIGGAPYSLDATLTTVGVVDGDLLALQPVPAGPPAPRIVEDIADAAM 120 Query 112 IFSTSRLKPWGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALA 171 IFS +R KPWG IQRGA AV+ + L+AT L V +RV T + G+ AV+ +A+A+ L Sbjct 121 IFSAAREKPWGTPQIQRGATVAVVGLMLVATALAVAHRVVTDSIIGVFAVSAVAIAAVLG 180 Query 172 GLLITIRSPRSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSA 231 L+ SPR AL+ AAL +GAA ALAVPG FG + VLLGAAG+AAWS+I++ + Sbjct 181 ALVARTGSPRVATALAAAALPSVGAAFALAVPGDFGASGVLLGAAGIAAWSIISITV--- 237 Query 232 ERERVVAFFTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWAR 291 ER +A FTA A VA+AA A +W L LL IGC LI+ ALL+T+QAAQLSA+ AR Sbjct 238 -GERAIAVFTAVAAAALGVAVAAAAATVWSLSLLDIGCVLILIALLMTVQAAQLSAMCAR 296 Query 292 FPLPVIPAPGDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAI---AVR 348 P+PVIPAPGDP PSA P R+LEDLPRR+R DA+Q+GFIAA VLL+V GSV + AV Sbjct 297 LPVPVIPAPGDPAPSALPRRVLEDLPRRIRAGDAYQTGFIAAGVLLAVTGSVLVVWPAVS 356 Query 349 PE-ALSVVGWYLVAATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAA 407 + + V WYLVAATA AA LRARVWDS+ACKAWLL YLV VLLV A Y AA Sbjct 357 GDGGVPVWSWYLVAATALAAALRARVWDSSACKAWLLGHGYLVTTVLLVLSAAHENYPAA 416 Query 408 FGAVLVLAVLMLAWVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFA 467 + A+ VLAVL+ AW V ALNP IA P++YSLP+RR++G VA LD S+IPVMAYLVGLF Sbjct 417 WWALGVLAVLVAAWAVAALNPRIAQPDTYSLPMRRVVGFVATALDASVIPVMAYLVGLFT 476 Query 468 WVLN 471 VLN Sbjct 477 LVLN 480 >gi|119866443|ref|YP_936395.1| hypothetical protein Mkms_0388 [Mycobacterium sp. KMS] gi|119692532|gb|ABL89605.1| protein of unknown function DUF571 [Mycobacterium sp. KMS] Length=464 Score = 403 bits (1036), Expect = 3e-110, Method: Compositional matrix adjust. Identities = 283/472 (60%), Positives = 341/472 (73%), Gaps = 13/472 (2%) Query 6 MQIVRVAILADS----RLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAA-VQ 60 M IVRVA+LA RLTEMALPA LPLREILPAVQR+ P + DG + D + Sbjct 1 MPIVRVAVLAGGDDGGRLTEMALPAGLPLREILPAVQRMARP---HDDGDRDDPAPQPAR 57 Query 61 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP 120 LSLAP+GG PFSLDA+LDTVGVVDGDLL LQPVPAGP+AP IVEDIADAA+IFS +R K Sbjct 58 LSLAPIGGAPFSLDATLDTVGVVDGDLLALQPVPAGPSAPRIVEDIADAAVIFSAAREKR 117 Query 121 WGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP 180 WG HI+R A AAV+ + L+ TGL+V +R+ T GL+ V +AVA+ L LL SP Sbjct 118 WGPTHIRRAAAAAVVGLILVVTGLSVAHRLVTDDGIGLIVVCAVAVAAVLGALLSRASSP 177 Query 181 RSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFF 240 L+++AL + AA ALAVPG FG AQ+LL AAGV AWS+I+L +R VA F Sbjct 178 ALASTLALSALPAVAAAFALAVPGDFGAAQILLAAAGVTAWSVISLTT----GDRAVAVF 233 Query 241 TAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAP 300 T A G V L A A LW L +GC LI+ LLVT+QAAQLSA+WARFPLPVIPAP Sbjct 234 TTTAATGFGVLLTAAAASLWTLSETVLGCVLILTGLLVTVQAAQLSAMWARFPLPVIPAP 293 Query 301 GDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLV 360 GDPTPSA PLR+LEDLPRRV++S +HQ+GF+AA V+L V GS+ + V + +S WY+V Sbjct 294 GDPTPSAQPLRVLEDLPRRVQLSQSHQTGFLAAGVVLGVTGSLVL-VGQQDVSRWAWYVV 352 Query 361 AATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLA 420 A AA A LRARVWDSA CKAWLLA P L+ VLLV + AT R+ AA+ A+ A +++ Sbjct 353 VAVAAGAVLRARVWDSAPCKAWLLAHPLLLGVVLLVLFAATDRFDAAWWALAATAAVVVV 412 Query 421 WVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 WV+VALNP IASPE+YSLP+RRL+G A +D SLIPVMA LVGLF+WVLNR Sbjct 413 WVIVALNPSIASPETYSLPMRRLVGFAATAVDASLIPVMALLVGLFSWVLNR 464 >gi|108797359|ref|YP_637556.1| hypothetical protein Mmcs_0379 [Mycobacterium sp. MCS] gi|108767778|gb|ABG06500.1| protein of unknown function DUF571 [Mycobacterium sp. MCS] Length=459 Score = 397 bits (1020), Expect = 2e-108, Method: Compositional matrix adjust. Identities = 275/456 (61%), Positives = 332/456 (73%), Gaps = 9/456 (1%) Query 18 RLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAA-VQLSLAPVGGQPFSLDAS 76 RLTEMALPA LPLREILPAVQR+ P + DG + D +LSLAP+GG PFSLDA+ Sbjct 12 RLTEMALPAGLPLREILPAVQRMARP---HDDGDRDDPAPQPARLSLAPIGGAPFSLDAT 68 Query 77 LDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKPWGIAHIQRGALAAVIA 136 LDTVGVVDGDLL LQPVPAGP+AP IVEDIADAA+IFS +R K WG HI+R A AAV+ Sbjct 69 LDTVGVVDGDLLALQPVPAGPSAPRIVEDIADAAVIFSAAREKRWGPTHIRRAAAAAVVG 128 Query 137 VALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSPRSGIALSIAALVPIGA 196 + L+ TGL+V +R+ T GL+ V +AVA+ L LL SP L+++AL + A Sbjct 129 LILVVTGLSVAHRLVTDDGIGLIVVCAVAVAAVLGALLSRASSPALASTLALSALPAVAA 188 Query 197 ALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFFTAAAVVGASVALAAGA 256 A ALAVPG FG AQ+LL AAGV AWS+I+L +R VA FT A G V L A A Sbjct 189 AFALAVPGDFGAAQILLAAAGVTAWSVISLTT----GDRAVAVFTTTAATGFGVLLTAAA 244 Query 257 QLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAPGDPTPSAPPLRLLEDL 316 LW L +GC LI+ LLVT+QAAQLSA+WARFPLPVIPAPGDPTPSA PLR+LEDL Sbjct 245 ASLWTLSETVLGCVLILTGLLVTVQAAQLSAMWARFPLPVIPAPGDPTPSAQPLRVLEDL 304 Query 317 PRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLVAATAAAATLRARVWDS 376 PRRV++S +HQ+GF+AA V+L V GS+ + V + +S WY+V A AA A LRARVWDS Sbjct 305 PRRVQLSQSHQTGFLAAGVVLGVTGSLVL-VGQQDVSRWAWYVVVAVAAGAVLRARVWDS 363 Query 377 AACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLAWVVVALNPGIASPESY 436 A CKAWLLA P L+ VLLV + AT R+ AA+ A+ A +++ WV+VALNP IASPE+Y Sbjct 364 APCKAWLLAHPLLLGVVLLVLFAATDRFDAAWWALAATAAVVVVWVIVALNPSIASPETY 423 Query 437 SLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 SLP+RRL+G A +D SLIPVMA LVGLF+WVLNR Sbjct 424 SLPMRRLVGFAATAVDASLIPVMALLVGLFSWVLNR 459 >gi|126432980|ref|YP_001068671.1| hypothetical protein Mjls_0367 [Mycobacterium sp. JLS] gi|126232780|gb|ABN96180.1| protein of unknown function DUF571 [Mycobacterium sp. JLS] Length=444 Score = 389 bits (998), Expect = 8e-106, Method: Compositional matrix adjust. Identities = 271/452 (60%), Positives = 328/452 (73%), Gaps = 9/452 (1%) Query 22 MALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAA-VQLSLAPVGGQPFSLDASLDTV 80 MALPA LPLREILPAVQR+ P + DG + D +LSLAP+GG PFSLDA+LDTV Sbjct 1 MALPAGLPLREILPAVQRMARP---HDDGDRDDPAPQPARLSLAPIGGAPFSLDATLDTV 57 Query 81 GVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKPWGIAHIQRGALAAVIAVALL 140 GVVDGDLL LQPVPAGP+AP IVEDIADAA+IFS +R K WG HI+R A AAV+ + L+ Sbjct 58 GVVDGDLLALQPVPAGPSAPRIVEDIADAAVIFSAAREKRWGPTHIRRAAAAAVVGLILV 117 Query 141 ATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSPRSGIALSIAALVPIGAALAL 200 ATGL+V +R+ T GL+ V +AVA+ L LL SP L+++AL + AA AL Sbjct 118 ATGLSVAHRLVTDDGIGLIVVCAVAVAAVLGALLSRASSPALASTLALSALPAVAAAFAL 177 Query 201 AVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFFTAAAVVGASVALAAGAQLLW 260 AVPG FG AQ+LL AAGV AWS+I+L +R VA FT A G V L A LW Sbjct 178 AVPGDFGAAQILLAAAGVTAWSVISLTT----GDRAVAVFTTTAATGFGVLLTAAGASLW 233 Query 261 QLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAPGDPTPSAPPLRLLEDLPRRV 320 L +GC LI+ LLVT+QAAQLSA+WARFPLPVIPAPGDPTPSA PLR+LEDLPRRV Sbjct 234 TLSETVLGCVLILTGLLVTVQAAQLSAMWARFPLPVIPAPGDPTPSAQPLRVLEDLPRRV 293 Query 321 RVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLVAATAAAATLRARVWDSAACK 380 ++S +HQ+GF+AA V+L V GS+ + V + +S WY+V A AA A LRARVWDSA CK Sbjct 294 QLSQSHQTGFLAAGVVLGVTGSLVL-VGQQDVSRWAWYVVVAVAAGAVLRARVWDSAPCK 352 Query 381 AWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLAWVVVALNPGIASPESYSLPL 440 AWLLA P L+ VLLV + AT R+ AA+ A+ A +++ WV+VALNP IASPE+YSLP+ Sbjct 353 AWLLAHPLLLGVVLLVLFAATDRFDAAWWALAATAAVVVVWVIVALNPSIASPETYSLPM 412 Query 441 RRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 RRL+G A +D SLIPVMA LVGLF+WVLNR Sbjct 413 RRLVGFAATAVDASLIPVMALLVGLFSWVLNR 444 >gi|296393175|ref|YP_003658059.1| secretion protein snm4 [Segniliparus rotundus DSM 44985] gi|296180322|gb|ADG97228.1| secretion protein snm4 [Segniliparus rotundus DSM 44985] Length=498 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 208/482 (44%), Positives = 277/482 (58%), Gaps = 26/482 (5%) Query 3 GTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQLS 62 G +VRVA+L D +L ++ALP +LPLREI+PAV+RLV P++ D D +LS Sbjct 27 GVASPLVRVAVLGDGKLADLALPTDLPLREIIPAVRRLVAPTSP--DETTPDG---RRLS 81 Query 63 LAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP-W 121 LAP+GG PFSLDA+LD VG+VDGDLL LQP+PAGPAA +VED+A A + +R+ P W Sbjct 82 LAPLGGAPFSLDATLDAVGIVDGDLLALQPLPAGPAAASVVEDVA-DAAALAGARVGPGW 140 Query 122 GIAHIQRGA-LAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSP 180 + QR A + A + + L + + GV A V A A + +L + RSP Sbjct 141 NVGLTQRVARVTAAVFLLLFTVVASAWWSHGGGVPARCALVGVAVAAVAASLVLRSRRSP 200 Query 181 RSG------IALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERE 234 + + L + AL P+ AA A VPG FGPAQ+LL AA W+++ ++ E Sbjct 201 EASAVPSAAVLLPLVALFPVTAAAAALVPGPFGPAQLLLAAAAATTWAVLCVL----GSE 256 Query 235 RVVAFFTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPL 294 R AFFTA A G + L GAQ+LW + + C LI+ L +T+ A LS L+AR PL Sbjct 257 RSTAFFTAVAAFGLAHVLVCGAQVLWHISSPASPCVLILLGLALTVAAPALSVLFARLPL 316 Query 295 PVIPAPGDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSV 354 P +PAPGDP P+ +L DLPRR + + +G IA A VLG + + P A + Sbjct 317 PDLPAPGDPLPAPNDKTVLADLPRRASRAASLHTGLIAGATSTLVLG--VLCLLPTAANG 374 Query 355 VG------WYLVAATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAF 408 G WY+ A +A LRARV AA KAWL+ P LVA + G+++ A Sbjct 375 AGSGNFWRWYVALAALSATVLRARVPAGAAAKAWLVTAPALVAALGAGIAARAGQWLWAL 434 Query 409 GAVLVLAVLMLAWVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAW 468 VL V+ W+VVA P +A PE YSLP RR + L A LD SLIPV+AYL G+F W Sbjct 435 VLAGVLGVIAAIWLVVAARPKLADPEGYSLPARRAVNLFALALDASLIPVIAYLCGVFQW 494 Query 469 VL 470 VL Sbjct 495 VL 496 >gi|296165970|ref|ZP_06848428.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898672|gb|EFG78220.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=195 Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 147/184 (80%), Positives = 158/184 (86%), Gaps = 5/184 (2%) Query 2 SGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDG-----GQADSG 56 SG VM IVRVAILADSRLTEMALPAELPLREILPAVQRLV+P+ NGD G AD G Sbjct 12 SGAVMPIVRVAILADSRLTEMALPAELPLREILPAVQRLVIPATSNGDADDTARGTADLG 71 Query 57 AAVQLSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTS 116 AA QLSLAP+GG PFSLDASLDTVGVVDGDLL LQPVPAGPAAPGIVEDIADAAMIFSTS Sbjct 72 AATQLSLAPIGGAPFSLDASLDTVGVVDGDLLALQPVPAGPAAPGIVEDIADAAMIFSTS 131 Query 117 RLKPWGIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLIT 176 RLKPW HI+RGALAAVIAVA LATGL+VTYRVATG LAGL+AV+ +A +A+ GLL+ Sbjct 132 RLKPWDARHIRRGALAAVIAVAFLATGLSVTYRVATGALAGLVAVSAVAAVTAIVGLLVA 191 Query 177 IRSP 180 RSP Sbjct 192 ARSP 195 >gi|317509549|ref|ZP_07967141.1| hypothetical protein HMPREF9336_03515 [Segniliparus rugosus ATCC BAA-974] gi|316252155|gb|EFV11633.1| hypothetical protein HMPREF9336_03515 [Segniliparus rugosus ATCC BAA-974] Length=236 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 152/238 (64%), Positives = 179/238 (76%), Gaps = 2/238 (0%) Query 235 RVVAFFTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPL 294 +VAFFT+A VVG + AA AQ LW P++++GCGLI AALLVT++AAQLSAL AR PL Sbjct 1 ELVAFFTSAVVVGLGLVGAAAAQTLWSPPMMTLGCGLIAAALLVTVKAAQLSALSARLPL 60 Query 295 PVIPAPGDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSV 354 P IPAPGDP PSAPP+ +L DLPRRV++SD+HQSGFIA A LL+VLGS +AV A S Sbjct 61 PTIPAPGDPAPSAPPISVLRDLPRRVKLSDSHQSGFIAGASLLAVLGS--LAVGSAAHSP 118 Query 355 VGWYLVAATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVL 414 + WYLV AT A A LRARVWDSA CKAWLLA P+L A L + A+GR+ AA G+ L Sbjct 119 LAWYLVVATGAGAALRARVWDSAVCKAWLLAVPFLTATALTAAFAASGRFPAALGSFGAL 178 Query 415 AVLMLAWVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 A L+ A VVV NP I ESYSLP RR LG VA+GLD SL+PV+AYLVGLFA VL+R Sbjct 179 AALVAALVVVVANPKIGQAESYSLPTRRALGFVASGLDASLLPVIAYLVGLFALVLDR 236 >gi|108802524|ref|YP_642720.1| hypothetical protein Mmcs_5564 [Mycobacterium sp. MCS] gi|119855353|ref|YP_935956.1| hypothetical protein Mkms_5967 [Mycobacterium sp. KMS] gi|108772943|gb|ABG11664.1| protein of unknown function DUF571 [Mycobacterium sp. MCS] gi|119698070|gb|ABL95141.1| protein of unknown function DUF571 [Mycobacterium sp. KMS] Length=472 Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 198/473 (42%), Positives = 277/473 (59%), Gaps = 22/473 (4%) Query 9 VRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ----LSLA 64 VRVA++ D R ++ALP L +RE++P + R + S ++ D ++GA V SLA Sbjct 10 VRVAVIGDGRAADLALPTTLAIRELIPRI-RATLASGRDDDEVPTNNGADVDELRPYSLA 68 Query 65 PVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKPWGIA 124 P+GG PFSLDA+L+T+ + DG+ LVL +P GPAAP +VEDIADAA I S SR KP+ A Sbjct 69 PLGGTPFSLDATLETLAIDDGEQLVLCKLPPGPAAPPVVEDIADAAAIHSASRFKPFTHA 128 Query 125 HIQRGALAAVIAVALLATGLTVT-----YRVATGVLAGLLAVAGIAVASALAGLLITIRS 179 + A V+A+ L GL + Y++ G L V IA L T+ + Sbjct 129 LLPAVAQVVVLALGALGCGLALDGWRRGYQLWAAAGLGALTVVFIAATVILRRRGYTVAA 188 Query 180 PRSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAF 239 R G+A ++ P+G ALA ++PG +VLL AA + AW+L+ L++ S VA Sbjct 189 GRMGVATTL----PLGLALAASLPGDGAAPRVLLAAACLLAWALLLLVLTSTW----VAT 240 Query 240 FTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPA 299 +TA + A+VA+AA + LW LP LS+GCG++ +LL+ A LSA WARFPLP +PA Sbjct 241 YTAIIAISATVAIAAAVRTLWHLPYLSLGCGVLAVSLLLASNAPTLSAAWARFPLPNVPA 300 Query 300 PGDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYL 359 PG+PTP L +EDLPRR S+++QSG IAA+V+L+V GSV + P A +++ W+L Sbjct 301 PGEPTPPPKSLAEIEDLPRRAATSNSYQSGLIAASVILAVTGSVLVLWLPAAPALLAWWL 360 Query 360 VAATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLML 419 V AT LR R+WDSA W LA P+L L V +TATG +A L A + Sbjct 361 VVATITVTVLRMRIWDSAIPALWFLAAPFLTVAALTVSFTATGHAIAG----LYAAAAAV 416 Query 420 AWVVVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLNR 472 VV L P S+P RR L L L ++++P M +LVGL + + NR Sbjct 417 GMTVVLLIASTLKPRELSIPRRRYLDLFENTLLITIVPAMLWLVGLVSLIRNR 469 >gi|339293347|gb|AEJ45458.1| transmembrane protein [Mycobacterium tuberculosis CCDC5079] Length=122 Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 118/120 (99%), Positives = 119/120 (99%), Gaps = 0/120 (0%) Query 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 60 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ Sbjct 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 60 Query 61 LSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP 120 LSLAPVGGQPFSLDA+LDTVGVVDGDLLVLQPVP GPAAPGIVEDIADAAMIFSTSRLKP Sbjct 61 LSLAPVGGQPFSLDANLDTVGVVDGDLLVLQPVPTGPAAPGIVEDIADAAMIFSTSRLKP 120 >gi|289756355|ref|ZP_06515733.1| transmembrane protein [Mycobacterium tuberculosis T85] gi|289711919|gb|EFD75931.1| transmembrane protein [Mycobacterium tuberculosis T85] Length=78 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 77/78 (99%), Positives = 78/78 (100%), Gaps = 0/78 (0%) Query 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 60 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ Sbjct 1 MSGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQ 60 Query 61 LSLAPVGGQPFSLDASLD 78 LSLAPVGGQPFSLDA+LD Sbjct 61 LSLAPVGGQPFSLDANLD 78 >gi|317506400|ref|ZP_07964207.1| hypothetical protein HMPREF9336_00577 [Segniliparus rugosus ATCC BAA-974] gi|316255306|gb|EFV14569.1| hypothetical protein HMPREF9336_00577 [Segniliparus rugosus ATCC BAA-974] Length=119 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 75/125 (60%), Positives = 94/125 (76%), Gaps = 9/125 (7%) Query 2 SGTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQL 61 VM IVRVA+L D +L E+ALP +LP+R+I+P+V R++ + + D Q +L Sbjct 3 DNAVMPIVRVAVLGDKKLAEVALPTQLPMRDIIPSVHRML--ATEAADLPQ-------RL 53 Query 62 SLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKPW 121 SLAPV G PFS DA+LDTVGVVDGDLL L+P PAGPAAPG+VED+ADAA+IFS SR +PW Sbjct 54 SLAPVHGAPFSADATLDTVGVVDGDLLTLRPTPAGPAAPGVVEDVADAAVIFSESRTRPW 113 Query 122 GIAHI 126 G AHI Sbjct 114 GAAHI 118 >gi|317509547|ref|ZP_07967140.1| hypothetical protein HMPREF9336_03514 [Segniliparus rugosus ATCC BAA-974] gi|316252157|gb|EFV11634.1| hypothetical protein HMPREF9336_03514 [Segniliparus rugosus ATCC BAA-974] Length=270 Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 114/271 (43%), Positives = 154/271 (57%), Gaps = 6/271 (2%) Query 203 PGKFGPAQVLLGAAGVAAWSLIALMIPSAER--ERVVAFFTAAAVVGASVALAAGAQLLW 260 PG F A LL AA AWS++ +++P+ ER AFFT AA V +V + + A+++W Sbjct 1 PGSFAAAHALLAAAAALAWSVVVVLLPAQVNTVERATAFFTGAATVALAVLVVSVARIVW 60 Query 261 QLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAPGDPTPSAPPLRLLEDLPRRV 320 + + C LIV L VT+ A LS L++R PLP +PAPGDP P P LL DLPRR Sbjct 61 GVSSPTTQCLLIVFGLAVTVAAPALSVLFSRLPLPDLPAPGDPLPVVAP-GLLADLPRRA 119 Query 321 RVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSV-VGWYLVAATAAAATLRARVWDSAAC 379 R + + +G +A A L V+G A+ + P A + WY+ A A LRARV AA Sbjct 120 RRAASLHTGLVAGATLALVIG--ALYLPPVAFANGWRWYVALAALGATALRARVPAGAAA 177 Query 380 KAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLAWVVVALNPGIASPESYSLP 439 K WL+ P L + V G++ A L V+ W+VVA P +A PE YSLP Sbjct 178 KTWLVTAPTLAGALGAVIAIREGQWCWALIMAGALGVIAAIWLVVAARPKLADPEGYSLP 237 Query 440 LRRLLGLVAAGLDVSLIPVMAYLVGLFAWVL 470 +RR++ L A LD SLIP +AY+ G+F WVL Sbjct 238 VRRVVNLFALALDASLIPTIAYVCGVFQWVL 268 >gi|317506274|ref|ZP_07964090.1| hypothetical protein HMPREF9336_00459 [Segniliparus rugosus ATCC BAA-974] gi|316255432|gb|EFV14686.1| hypothetical protein HMPREF9336_00459 [Segniliparus rugosus ATCC BAA-974] Length=160 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 73/132 (56%), Positives = 92/132 (70%), Gaps = 8/132 (6%) Query 8 IVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAV----QLSL 63 +VRVA+L D +L ++ALP +LPLREI+PAV+RLV P + D G A+ A +LSL Sbjct 22 LVRVAVLGDGKLADLALPTDLPLREIIPAVRRLVAPG--SADEGTAEGSPAAPEGRRLSL 79 Query 64 APVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKP-WG 122 AP+GG P+SLDA+LD VG VDG+LLVLQ PAGP+A +VEDIADAA + SR+ P W Sbjct 80 APLGGAPYSLDATLDAVGTVDGELLVLQQQPAGPSAASVVEDIADAAAL-EGSRVGPGWN 138 Query 123 IAHIQRGALAAV 134 I R A A V Sbjct 139 AEAIGRAARATV 150 >gi|312140880|ref|YP_004008216.1| esx cluster integral membrane protein [Rhodococcus equi 103S] gi|311890219|emb|CBH49537.1| putative esx cluster integral membrane protein [Rhodococcus equi 103S] Length=491 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 114/389 (30%), Positives = 168/389 (44%), Gaps = 29/389 (7%) Query 7 QIVRVAILADSRLTEMALPAELPLREILPAVQRLVVP-SAQNGDGGQADSGAAVQLSLAP 65 + R+ IL ++ALP +P+ ++P + LV SA N D + L+ Sbjct 23 DLCRLTILTPHSQIDLALPNSVPVELLVPGIADLVEKHSAANDFDVAGDRLHPTRWVLSR 82 Query 66 VGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKPWG--I 123 VG P S ++L GV+DG+LLV V A P P + +D+ + T PW I Sbjct 83 VGSPPLSPASTLQEHGVLDGELLVFDSVEASPPPP-LFDDVMYNVAVADTGHAHPWTPRI 141 Query 124 AHIQRGALAAVIA-----VALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIR 178 A + A+A A V L G T + G +A V VA A+AG + Sbjct 142 ARLTGSAIAVAAATAGAFVLLRTEGATAS---VIGAVAAFAMVVAFLVAGAVAGRVYDDA 198 Query 179 SPRSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVA 238 + + + AL VPG P LLG V A +++AL A Sbjct 199 GAALTLGAAALPIAFAAGALF--VPGDDLPPDTLLGLVMVGACAVVALRAAGVGH----A 252 Query 239 FFTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIP 298 FT AA V +LAA +L S+G L+ AL + A +++ + A+ PLP +P Sbjct 253 VFTTAASVSLLGSLAALVAVLTDQSTRSVGAMLVGGALFGLVFAPRIAMMLAKLPLPPVP 312 Query 299 APG---DPTPSAPP----LRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEA 351 APG DPT P L + RR + + +G +A LL+V G++ +A P A Sbjct 313 APGTSLDPTEEDPDDARSLPSFATVERRAEHARRYLTGLVAGWTLLTVTGAL-LASAPSA 371 Query 352 LSVVGWYLVAATAAAAT---LRARVWDSA 377 + W + AAAT R R + SA Sbjct 372 SDGIYWPGTSLAVAAATVLMFRGRTYSSA 400 >gi|325675482|ref|ZP_08155166.1| hypothetical protein HMPREF0724_12948 [Rhodococcus equi ATCC 33707] gi|325553453|gb|EGD23131.1| hypothetical protein HMPREF0724_12948 [Rhodococcus equi ATCC 33707] Length=489 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 114/389 (30%), Positives = 168/389 (44%), Gaps = 29/389 (7%) Query 7 QIVRVAILADSRLTEMALPAELPLREILPAVQRLVVP-SAQNGDGGQADSGAAVQLSLAP 65 + R+ IL ++ALP +P+ ++P + LV SA N D + L+ Sbjct 21 DLCRLTILTPHSQIDLALPNSVPVELLVPGIADLVEKHSAANDFDVAGDRLHPTRWVLSR 80 Query 66 VGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKPWG--I 123 VG P S ++L GV+DG+LLV V A P P + +D+ + T PW I Sbjct 81 VGSPPLSPASTLQEHGVLDGELLVFDSVEASPPPP-LFDDVMYNVAVADTGHAHPWTPRI 139 Query 124 AHIQRGALAAVIA-----VALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIR 178 A + A+A A V L G T + G +A V VA A+AG + Sbjct 140 ARLTGSAIAVAAATAGAFVLLRTEGATAS---VIGAVAAFAMVVAFLVAGAVAGRVYDDA 196 Query 179 SPRSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVA 238 + + + AL VPG P LLG V A +++AL A Sbjct 197 GAALTLGAAALPIAFAAGALF--VPGDDLPPDTLLGLVMVGACAVVALRAAGVGH----A 250 Query 239 FFTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIP 298 FT AA V +LAA +L S+G L+ AL + A +++ + A+ PLP +P Sbjct 251 VFTTAASVSLLGSLAALVAVLTDQSTRSVGAMLVGGALFGLVFAPRIAMMLAKLPLPPVP 310 Query 299 APG---DPTPSAPP----LRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEA 351 APG DPT P L + RR + + +G +A LL+V G++ +A P A Sbjct 311 APGTSLDPTEEDPDDARSLPSFATVERRAEHARRYLTGLVAGWTLLTVTGAL-LASAPSA 369 Query 352 LSVVGWYLVAATAAAAT---LRARVWDSA 377 + W + AAAT R R + SA Sbjct 370 SDGIYWPGTSLAVAAATVLMFRGRTYSSA 398 >gi|226365631|ref|YP_002783414.1| hypothetical protein ROP_62220 [Rhodococcus opacus B4] gi|226244121|dbj|BAH54469.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=490 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 133/485 (28%), Positives = 223/485 (46%), Gaps = 37/485 (7%) Query 3 GTVMQIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQA-DSGAAVQL 61 G + R+ +L+ +MA+P +PL ++P + + + D + + + Sbjct 18 GAAADLCRITVLSKHSQVDMAVPFGVPLAILVPGIVDTIRTNRSTNDFDDSLEQYEPSEW 77 Query 62 SLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKPW 121 LA +G P S +L G+ DGDLLVLQ V A A P + +DI I + W Sbjct 78 VLAKIGHSPLSTTLTLHEHGIRDGDLLVLQSVHAS-APPPLFDDIMYNVAIADVEGDREW 136 Query 122 --GIAHIQRGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRS 179 G A + G++AAV+ + + L + G L AG AVA+AL L+ + Sbjct 137 TRGSARVV-GSVAAVLGTVVGSFALLWSGAGTEGFLG-----AGCAVAAALLFLIAGAVT 190 Query 180 PR------SGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAER 233 R S + LS A+ AA L VPG G A +LLG A +++AL + A Sbjct 191 ARVYGDAPSSVVLSGCAVPLSFAAGMLFVPGDLGAAHLLLGLALAGTTAILALRLGGAG- 249 Query 234 ERVVAFFTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFP 293 + FTA +V ++AA L+ P+ +G G++ AAL+ +A++S L A+ P Sbjct 250 ---LRLFTALSVTSLFGSIAALVATLFGNPIAGVGAGVVAAALIGLAFSARVSILLAKLP 306 Query 294 LPVIPAPGDPTPSAP-------PLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIA 346 LP +PAPG + + + L +R + + +G + A L+V G++ +A Sbjct 307 LPPVPAPGTSVDPSEDDPDDEVTMPSFDSLAQRAARAHKYLTGLVGAMTALAVTGAL-LA 365 Query 347 VRPEALSVVGW---YLVAATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGR 403 P + W L ATA R R + SA A P + GV ++ TG Sbjct 366 AHPGVHDGIFWPGLSLAVATATVLMFRGRTYSSAE-----QAVPLIAGGVTILVLLLTGA 420 Query 404 YVAAFGAVLVLAVLMLAWVVVALNPGIASP-ESYSLPLRRLLGLVAAGLDVSLIPVMAYL 462 VA + + + + V L GI +P +++S +RR+ L+ + S++P++ ++ Sbjct 421 AVAVPDFAIASFAVAILFAVGGLVLGILAPRQTFSPVMRRVAELIDLAVIASIVPLVCWV 480 Query 463 VGLFA 467 GL++ Sbjct 481 TGLYS 485 >gi|54022817|ref|YP_117059.1| hypothetical protein nfa8500 [Nocardia farcinica IFM 10152] gi|54014325|dbj|BAD55695.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=488 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 126/478 (27%), Positives = 219/478 (46%), Gaps = 29/478 (6%) Query 7 QIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGD-GGQADSGAAVQLSLAP 65 + RV ILA +MA+P ++P+ ++P+V +V +++ D + + + LA Sbjct 22 DLARVTILAKHTQVDMAIPVDVPVALVIPSVVDMVAQHSRSNDFDNEGERFEPAEWVLAR 81 Query 66 VGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKPWGIAH 125 +G PFS SL GV DG+LL+L+ P + +DI I + W Sbjct 82 IGHPPFSNSLSLGEHGVRDGELLMLESASHTAPTP-LFDDIMYNVAIADADHFRGWTPET 140 Query 126 IQ-RGALAAVIAVALLATGLTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSPRSGI 184 + G++ A + + + GL + ++G +A+A + + +AG++++ + Sbjct 141 ARLTGSVLAAVTMLVGCLGLLASPAAMPEWVSGSIALA-VVILLVVAGMVLSRMYGDTAT 199 Query 185 ALSI--AALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFFTA 242 AL + AL A L VP +G A +LLG + A +++A + +A F Sbjct 200 ALVLGGCALPAAFTAGMLYVPDHYGWAHLLLGGTLLGATAILAWRVTGVG----LALFIG 255 Query 243 AAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAPG- 301 A V + AA LL PL +IG L A +LS L A+ PLP +P+PG Sbjct 256 TAAVAVYLVPAALVGLLTDQPLRAIGAVAAALGLAGLSLAPRLSMLLAKLPLPPVPSPGT 315 Query 302 --DPTPSAPP----LRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVV 355 DPT P L +E L + + + +G +AA L++ G++A A P+A Sbjct 316 PIDPTEDDPDDHRALPTMEALRVKSERARMYLAGLVAATTLVTAAGALA-ATDPQADDPY 374 Query 356 --GWYLVAATAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRY-VAAFGAVL 412 G L A R+R + A L+A + ++LV T +A FGA + Sbjct 375 WQGIALALVCAVVLMFRSRTYAGAEQAVVLIAGGAAIVLIMLVGAAFTMEIPLAVFGATM 434 Query 413 VLAVLMLAWVVVALNPGIASP-ESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWV 469 ++ +V AL GI P +S + P+RR + L+ +++P++ ++ L++ V Sbjct 435 LM-------LVAALILGIIIPNQSATPPMRRGVELLEYAFVAAVLPLVFWVTSLYSLV 485 >gi|296393782|ref|YP_003658666.1| secretion protein snm4 [Segniliparus rotundus DSM 44985] gi|296180929|gb|ADG97835.1| secretion protein snm4 [Segniliparus rotundus DSM 44985] Length=502 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 123/499 (25%), Positives = 219/499 (44%), Gaps = 38/499 (7%) Query 2 SGTVMQ--IVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAV 59 SG+ ++ + RVA+L + ++ LP+E+P+ ++P + L+ N G + + A Sbjct 10 SGSSIEPALCRVAVLGGNAQFDVGLPSEVPVAVLIPDLVALIQTRVPNLGGEGSQNEARN 69 Query 60 QLSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLK 119 Q +L VG P L +L GV DGDLL+L+ V A +P + +D+ DA + + Sbjct 70 QWTLGRVGQAPIPLTKTLAEAGVHDGDLLILRAV-AAEESPLLFDDVIDAVARVNQHAFR 128 Query 120 PWGIAHIQRGALAAVIAVALLATGLTVTY-------RVATGVLAGLLAVAGIAVASALAG 172 WG + +A ++ + A L Y R + LL V G+ +AG Sbjct 129 HWGPNAARYLGMATLVVASFFAARLLFLYGSVAHESRFEDFLSPVLLIVWGLFF--HIAG 186 Query 173 LLITIRSPRSGIA--LSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPS 230 +I R + IA L L I + + VPG G + + A +++I+ + Sbjct 187 WVIGRRYHQHTIANVLCWCGLPFIFFGVMVCVPGPIGLSSIWAACAVAFVFAIISSRVSL 246 Query 231 AERERVVAFFTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWA 290 + + A T A +VG LA + +G L+ A+ + A++ + A Sbjct 247 SGMVQHTAVATLALLVG----LAYADMDYFGHSTQVVGAALVCMAIFIISSASKFTIALA 302 Query 291 RFPLPVIPAPG--------DPTPS--------APPLRLLEDLPRRVRVSDAHQSGFIAAA 334 + PLP +P G D PS A L +DL +R + ++ + +G + A+ Sbjct 303 KLPLPPVPTAGQAVDAEEIDLHPSVEGIGAIGAMALPNAKDLEQRAKAANNYLTGLVIAS 362 Query 335 VLLSVLGSVAIAVRPEA-LSVVGWYLVAATAAAATLRARVWDSAACKAWLLAQPYLVAGV 393 L+++ G++A A RP A G L A LR R + + ++ +L+ V Sbjct 363 SLVAIGGALA-AARPTAEYPWQGPLLGVIVAIVLVLRGRSFTDLVQASVMIVSGFLLF-V 420 Query 394 LLVFYTATGRYVAAFGAVLVLAVLMLAWVVVALNPGIASPESYSLPLRRLLGLVAAGLDV 453 L++ G L L V ++ + + L G+ P P+ R G V + Sbjct 421 ALLYAGGRGTLEHQPWIALALGVALVLFSIAFLIIGVIVPNQTYSPVMRRAGEVFEYTLI 480 Query 454 SLI-PVMAYLVGLFAWVLN 471 +LI P++ +++GL++ V N Sbjct 481 ALIFPLVFWIMGLYSAVRN 499 >gi|240168357|ref|ZP_04747016.1| hypothetical protein MkanA1_03532 [Mycobacterium kansasii ATCC 12478] Length=511 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 130/520 (25%), Positives = 202/520 (39%), Gaps = 93/520 (17%) Query 10 RVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQLS------L 63 RV IL R+T++ LPA P+ + V A + D A S Sbjct 24 RVTILTGKRMTDLVLPAAAPMETY---IDDTVAVLADLLEDTPPDVLAGFDFSAQGVWAF 80 Query 64 APVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKPWGI 123 A G P LD SLD GVVDG LL L V +VED+ DA + S Sbjct 81 ARPGFPPLRLDQSLDEAGVVDGSLLTLVTVSRTERYRPLVEDVIDAIAVLDES------- 133 Query 124 AHIQRGALAAVIAVAL---------------LATGLTVTYRVATGVLAGLLAVAGIAVAS 168 R AL + VA+ ATG + + +A G++ G++ + G VA Sbjct 134 PEFDRSALDRFVHVAIPVMTLPITVVAVRAWWATGRSPFWPLAIGII-GVVVLVGCFVAK 192 Query 169 ALAGLLITIRSPRSGIALSIAALVPIGAALALAVP-----GKFGPAQVLLGAAGVAAWSL 223 L S L + A P+ AA A+AVP G Q+ A V +L Sbjct 193 RFYQKLDLAES------LLLTAYQPLTAAAAIAVPLPRGVNSLGAPQIAAAATAVLFLTL 246 Query 224 IALMIPSAERERVVAF--FTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQ 281 + P R + +F T+ A + A+VA G Q W + G I L + Sbjct 247 MTRGGPR-RRHELASFVAITSIATIAAAVAFGYGYQ-HW------VPAGAIAFGLFIVTN 298 Query 282 AAQLSALWARFPLPVIPAPGDPTPSAPPLRLL-------EDLP----------------- 317 AA+L+ AR LP IP PG+ + L + E+ P Sbjct 299 AAKLTVAVARIALPPIPVPGETVDNEELLDPVTAQDATNEETPTWQAIIASAPASAARLT 358 Query 318 RRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYLVAATAAA------ATLRA 371 R +++ G++ A L+ GS+A+ V G + V + A R+ Sbjct 359 ERSKLAKQLLIGYVTAGTLVLAAGSIAVVVH-------GHFFVHSLVVAGLITVICGFRS 411 Query 372 RVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLAWVVVALNPGIA 431 R++ C +LA ++ L V + + A + LA ++A +VV A Sbjct 412 RLYADRWCAWAMLAAAVVIPTGLAVRLSLWYPHYAWLMLTIYLATAVVALIVVG---ATA 468 Query 432 SPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWVLN 471 S ++R+L L+ + S++P++ ++ +F V N Sbjct 469 QVRRVSPVMKRILELIDGAMVASIVPLLLWITSVFDMVRN 508 >gi|317506955|ref|ZP_07964724.1| secretion protein snm4 [Segniliparus rugosus ATCC BAA-974] gi|316254713|gb|EFV14014.1| secretion protein snm4 [Segniliparus rugosus ATCC BAA-974] Length=503 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 117/500 (24%), Positives = 212/500 (43%), Gaps = 34/500 (6%) Query 2 SGTVMQ--IVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAV 59 SG+ ++ + RVA+L + ++ LPAE+P+ ++P + L+ N G + + A Sbjct 5 SGSSIEPALCRVAVLGGNAQFDVGLPAEVPVAVLIPDLVALIQTRVPNLGGEGSQNEARN 64 Query 60 QLSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLK 119 Q +L VG P L +L GV DGDLL+L+ V A +P + +D+ DA + + Sbjct 65 QWTLGRVGQAPIPLTKTLAEAGVYDGDLLILRAV-AAEESPLLFDDVIDAVSRVNQHAFR 123 Query 120 PWGIAHIQRGALAAVIAVALLATGLTVTY-------RVATGVLAGLLAVAGIAVASALAG 172 WG + +A ++ + A L Y R + L V G+ ++G Sbjct 124 HWGPNAARYLGMATLVVASFFAARLLFLYGSVPHESRFEDFLAPVLCIVWGVFF--HVSG 181 Query 173 LLITIRSPRSGIA--LSIAALVPIGAALALAVPGKFGPAQV--LLGAAGVAAWSLIALMI 228 +I R + I+ L + I + ++VPG A V L + + +I Sbjct 182 WIIGRRYHQHAISNVLCWCGVPFIFFGVMVSVPGDTSKANVWGLSSVWAACTVTFVIAII 241 Query 229 PSAERERVVAFFTAAAVVGASVALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSAL 288 S TA A + LA ++ +G L+ AA+ + ++ + Sbjct 242 SSRISTSGTVLHTAIATFTLLLGLAYADMDIFHHSYQVVGAALVCAAIFIISAGSKFAIA 301 Query 289 WARFPLPVIPAPG--------DPTPS--------APPLRLLEDLPRRVRVSDAHQSGFIA 332 A+ PLP +P G D PS A L +DL +R + S+ + +G + Sbjct 302 LAKLPLPPVPTAGQAVDAEEIDLHPSVEGIGAIGAMALPNAKDLEQRAKASNHYLTGLVI 361 Query 333 AAVLLSVLGSVAIAVRPEALSVVGWYLVAATAAAATLRARVWDSAACKAWLLAQPYLVAG 392 A+ L+++ G++A A A G L A LR R + + ++ + + Sbjct 362 ASSLIAIGGALAAARPTAAYPWQGPVLATIVAIVLVLRGRSFTDLVQASVMIGSGFFLF- 420 Query 393 VLLVFYTATGRYVAAFGAVLVLAVLMLAWVVVALNPGIASP-ESYSLPLRRLLGLVAAGL 451 V L++ G L L V ++ + + L G+ P ++YS +RR + L Sbjct 421 VALIYGGGRGSLQNQPWIALALGVALVLFSIAFLIIGVVVPNQTYSPVMRRAGEVFEYTL 480 Query 452 DVSLIPVMAYLVGLFAWVLN 471 + P++ +++GL++ V N Sbjct 481 IAFIFPLVFWIMGLYSAVRN 500 >gi|343925122|ref|ZP_08764654.1| hypothetical protein GOALK_033_01130 [Gordonia alkanivorans NBRC 16433] gi|343765053|dbj|GAA11580.1| hypothetical protein GOALK_033_01130 [Gordonia alkanivorans NBRC 16433] Length=514 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 95/355 (27%), Positives = 154/355 (44%), Gaps = 37/355 (10%) Query 7 QIVRVAILADSRLTEMALPAELPLREI---LPAVQRLVVPSAQNGDGGQADS-------G 56 Q+VRV++L + ++ LPA +P+ + L A P+ + D ADS Sbjct 30 QLVRVSVLGGNTQLDVGLPAGIPIAGLIGDLVAQIESRNPTRHDPDDPDADSRGRGRPHD 89 Query 57 AAVQLSLAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTS 116 + +LA VG +P L SL G+ DGDLL+L +P + +D+ DA + S Sbjct 90 RQNRWTLALVGQEPLPLHRSLSESGIRDGDLLLLTSTRT-DESPVLFDDVVDAVARLNES 148 Query 117 RLKPWGIAHIQRGALAAVIAVALLATGLTVTYRVATGVL--AGLLAVAGIAVASALAGLL 174 + W + A + A++A R+ +G L +GL +A I + +A + Sbjct 149 QFVGWTATSARYVGHALALVAAVVAAAGLAASRIDSGALWLSGLSGLAVIGLVTAATIVA 208 Query 175 ITIRSPRSGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERE 234 R S LS+ A + PG +G A + LG A +L+ +I R Sbjct 209 RYYRDQLSSTILSVCAAPMAFVTGMILTPGSYGAAHLTLGFA----LTLVTAVI--TYRM 262 Query 235 RVVAFFTAAAVVGASV--ALAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARF 292 V +AV GA+V AL GA+LL + + LL+ + +L+ L A+ Sbjct 263 TAVGATAHSAVTGAAVLGALGCGARLLLDADTSDVAAVMAAVGLLLIGLSPRLTILLAKL 322 Query 293 PLPVIPAPG--------DPTPS--------APPLRLLEDLPRRVRVSDAHQSGFI 331 PLP +P G +P PS A L + L RR +++A+ +G + Sbjct 323 PLPPVPTAGAAIDIKDIEPQPSIEGIGAIGATALPKADALERRSYIANAYLTGIV 377 >gi|271969302|ref|YP_003343498.1| hypothetical protein Sros_8100 [Streptosporangium roseum DSM 43021] gi|270512477|gb|ACZ90755.1| hypothetical protein Sros_8100 [Streptosporangium roseum DSM 43021] Length=481 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/138 (37%), Positives = 72/138 (53%), Gaps = 12/138 (8%) Query 8 IVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGD-GGQADSGAAVQLSLAPV 66 + V I+A R ++ALPA++PL +LP + R V G+ GG A +G L + Sbjct 28 LCHVTIVAPRRKADLALPADIPLPHVLPGLLRAV------GEIGGDASAGPGWVLQR--L 79 Query 67 GGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKPWGIAHI 126 GG P L SL T+GV+DG++L L+P A P + +D+AD WG H Sbjct 80 GGAPLDLGQSLGTLGVLDGEVLYLRPQEA-MLPPALFDDVADVVATGVQEGSDKWGPRHT 138 Query 127 QRGALAAVIAVALLATGL 144 + + A AVALL TG+ Sbjct 139 RLAGVGA--AVALLLTGV 154 >gi|54022794|ref|YP_117036.1| hypothetical protein nfa8270 [Nocardia farcinica IFM 10152] gi|54014302|dbj|BAD55672.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=493 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 90/309 (30%), Positives = 145/309 (47%), Gaps = 22/309 (7%) Query 7 QIVRVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAA----VQLS 62 ++ RV+++ + ++ LPA +P+ + + L+ ++N D ++ GAA + Sbjct 15 ELCRVSVIGGNTQVDVGLPATVPIATFMRDLVALI--ESRNPDPVDSEEGAAPLETQHWT 72 Query 63 LAPVGGQPFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKPWG 122 LA +G +L V DG+LLVL+ V A +P + +D+ DA + W Sbjct 73 LARLGRDAIPPSRTLTEAEVYDGELLVLRSVTA-KESPALFDDVIDAVSRLTAEDHHSWS 131 Query 123 IAHIQRGALAAVIAVALLATGLTVTYRVATGVLAG-LLAVAGIAVASALAGLLITIRSPR 181 + LAA + V LLA GL R G LA LA A A A + + R Sbjct 132 PRSARWTGLAACVTVVLLALGLFAVGRGHGGGLAAPFLATGAGLAAVAAAVIAVRKYDDR 191 Query 182 -SGIALSIAALVPIGAALALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSA--ERERVVA 238 + + LS+ AL+ AL VPG+ G ++LG + ++L+I V A Sbjct 192 LTALWLSLTALLLFFGGAALFVPGELGSPHLMLGCS-------VSLVIAVGLYRATGVGA 244 Query 239 FFTAAAVVGASVA-LAAGAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVI 297 AAAV A +AA +++W PL I GL+V A+++ +L+A+ AR P+P + Sbjct 245 TLCAAAVTLALFGGVAALVRMVWDTPLPRIAVGLLVGAIILLSMIPRLAAVAARLPVPPV 304 Query 298 PAPG---DP 303 P G DP Sbjct 305 PTAGAAIDP 313 >gi|333921709|ref|YP_004495290.1| hypothetical protein AS9A_4056 [Amycolicicoccus subflavus DQS3-9A1] gi|333483930|gb|AEF42490.1| hypothetical protein AS9A_4056 [Amycolicicoccus subflavus DQS3-9A1] Length=459 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 126/467 (27%), Positives = 209/467 (45%), Gaps = 36/467 (7%) Query 21 EMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQLSLAPVGGQPFSLDASLDTV 80 ++ALP +PL ILP + +V A D + AA Q +L+ +G P LD SL + Sbjct 8 DLALPDSVPLLLILPRLSEIVHCRASGPDTPSTTASAA-QWTLSRLGEGPLDLDLSLARL 66 Query 81 GVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKPWGIAHIQRGALAAVIAVALL 140 GV G++LVL PV P AP + +D+ +A S + W + ++ + +A++ AL Sbjct 67 GVRSGEVLVLSPVGEAPPAP-LFDDVIEAVAEHSAPKDATWTVGRGRKLSYSAMLGAALA 125 Query 141 ATGLTVTYRVATGVLAGL-LAVAGIAVASALAGLLITIRSPRSGIALSIAAL--VPIGAA 197 A+ + T LA L LA+AG+ ++ L L + + A + L +P+ AA Sbjct 126 ASLVLATSE----PLAHLQLALAGVFLSPVLFALAVAAQRHCGATASGVLLLSAIPVAAA 181 Query 198 -LALAVPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFFTAAAVVGASVALAAGA 256 +A +PG G ++ G A A +L+ L ++ F A VG AA Sbjct 182 SVAHLIPGNMGAPHLIAGGAVGATMALLGLRTFPLAAALLLPAFGTAVTVG----FAAML 237 Query 257 QLLWQLPLLSIGCGLIVAALLVTIQAAQLSALWARFPLPVIPAPG-----------DPTP 305 L+ L +I LI A A +L+ L AR P+P +PAPG D + Sbjct 238 NLVAGLGPATIAATLIAATPFAVAAAPRLAMLGARLPIPPVPAPGTALDVADAIHEDGSN 297 Query 306 SAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAI---AVRPEALSVVGWYLVAA 362 P + L + + + ++ +G IA + ++ I AV L + L A Sbjct 298 DTPHVTLCQ----KAQAAERFVTGVIATVTAVGAASAIVIASLAVMSGELPLPLAILTAI 353 Query 363 TAAAATLRARVWDSAACKAWLLAQPYLVAGVLLVFYTATGRYVAAFGAVLVLAVLMLAWV 422 AAA +LR R + + +A +L+ T + + + + VL+LA+V Sbjct 354 VAAALSLRGRSIAATVPALLVTGTGAFMAVSVLIAATLSAQVPPDLLFLAAILVLVLAFV 413 Query 423 VVALNPGIASPESYSLPLRRLLGLVAAGLDVSLIPVMAYLVGLFAWV 469 L PG SY+ RL L GL +++PV + +G+++ + Sbjct 414 FGTLAPG----RSYTPLQYRLAELTEYGLLAAIVPVACWALGVYSAI 456 >gi|302524033|ref|ZP_07276375.1| predicted protein [Streptomyces sp. AA4] gi|302432928|gb|EFL04744.1| predicted protein [Streptomyces sp. AA4] Length=466 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 124/455 (28%), Positives = 206/455 (46%), Gaps = 39/455 (8%) Query 10 RVAILADSRLTEMALPAELPLREILPAVQRLVVPSAQNGDGGQADSGAAVQLSLAPVGGQ 69 RV ++A + ++ALPA++ + ++LP + L + DGG G A LA +G Sbjct 10 RVTVVAPTTRIDVALPADVAVADLLPML--LEMAKEVTPDGGARHGGWA----LAKLGDA 63 Query 70 PFSLDASLDTVGVVDGDLLVLQPVPAGPAAPGIVEDIADAAMIFSTSRLKPWGIAHIQR- 128 P +L ++GVVDG+LL L+ P P + +D+ DA +PW +R Sbjct 64 PLDPSRTLASLGVVDGELLQLRKRNENPPPP-MYDDVVDAIAEADPDTFRPWTKETARRF 122 Query 129 ----GALAAVI-AVALLATG-LTVTYRVATGVLAGLLAVAGIAVASALAGLLITIRSPRS 182 G LA A+AL +G L + + GL A+A +AV + LA ++ + Sbjct 123 GHAAGGLALFFSALALFFSGSLYGGSALGPAIAGGLGAIACVAVGATLAK---AYQAEAT 179 Query 183 GIALSIAALVPIGAALALA-VPGKFGPAQVLLGAAGVAAWSLIALMIPSAERERVVAFFT 241 G+ ++ A +P+ VPG A +LLGA V S + +++ SA + F Sbjct 180 GVLIASAGGLPLAFVSGFYIVPGLSVRANLLLGAVLVLIVSAVCILVVSAG----IRVFI 235 Query 242 AAAVVGASVALAA-GAQLLWQLPLLSIGCGLIVAALLVTIQAAQLSALW-ARFPLPVIPA 299 A A G ALA A L+ S+ G VA L I + +W A+ PLP +P+ Sbjct 236 ATATAGVFGALAFLVATLVTSADTASVAAG-TVAVALGCISFLPRATIWLAKLPLPYVPS 294 Query 300 PGDPTPSAPPLRLLEDLPRRVRVSDAHQSGFIAAAVLLSVLGSVAIAVRPEALSVVGWYL 359 + + + +R V+ + +G + + + ++ A P +V G L Sbjct 295 TAEELKEDSGFPDYQAIEQRTAVAHDYMTGLMIGCGATTAVAAILAATAP---NVFGIIL 351 Query 360 VAATAAAATLRARVWDSAACKAWLLAQPYL-VAGVLL--VFYTATG--RYVAAFGAVLVL 414 LRAR + + A LL + AG+LL +F++AT R + FGA++++ Sbjct 352 GVIATLVLLLRARAYANGAQAIALLTTGMVAAAGILLGWLFFSATAEQRLLYVFGALILI 411 Query 415 AVLMLAWVVVALNPGIASPESYSLPLRRLLGLVAA 449 A L VV + + +S PLRR + ++ A Sbjct 412 AAAALVVGVVFPD------QRFSPPLRRTVEIIEA 440 Lambda K H 0.324 0.136 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1000830144706 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40