BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0292
Length=331
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607433|ref|NP_214806.1| transmembrane protein [Mycobacteriu... 647 0.0
gi|15839678|ref|NP_334715.1| hypothetical protein MT0305 [Mycoba... 645 0.0
gi|298523763|ref|ZP_07011172.1| conserved hypothetical protein [... 644 0.0
gi|289445831|ref|ZP_06435575.1| conserved membrane protein [Myco... 644 0.0
gi|341600223|emb|CCC62893.1| probable conserved transmembrane pr... 641 0.0
gi|254230666|ref|ZP_04923993.1| hypothetical protein TBCG_00289 ... 625 2e-177
gi|289760403|ref|ZP_06519781.1| conserved transmembrane protein ... 587 9e-166
gi|289568205|ref|ZP_06448432.1| conserved membrane protein [Myco... 560 1e-157
gi|289752325|ref|ZP_06511703.1| LOW QUALITY PROTEIN: transmembra... 556 1e-156
gi|15828359|ref|NP_302622.1| hypothetical protein ML2527 [Mycoba... 372 3e-101
gi|118466437|ref|YP_883984.1| hypothetical protein MAV_4860 [Myc... 361 1e-97
gi|336460253|gb|EGO39156.1| type VII secretion protein EccE [Myc... 355 5e-96
gi|183980579|ref|YP_001848870.1| transmembrane protein [Mycobact... 350 3e-94
gi|240172734|ref|ZP_04751393.1| putative transmembrane protein [... 345 7e-93
gi|254821600|ref|ZP_05226601.1| hypothetical protein MintA_16822... 342 3e-92
gi|296167646|ref|ZP_06849917.1| transmembrane protein [Mycobacte... 342 5e-92
gi|342859223|ref|ZP_08715877.1| hypothetical protein MCOL_10103 ... 335 5e-90
gi|118616928|ref|YP_905260.1| transmembrane protein [Mycobacteri... 329 4e-88
gi|254777301|ref|ZP_05218817.1| hypothetical protein MaviaA2_218... 280 3e-73
gi|41409886|ref|NP_962722.1| hypothetical protein MAP3788 [Mycob... 264 1e-68
gi|240169018|ref|ZP_04747677.1| hypothetical protein MkanA1_0687... 264 2e-68
gi|333988940|ref|YP_004521554.1| transmembrane protein [Mycobact... 256 3e-66
gi|108797361|ref|YP_637558.1| hypothetical protein Mmcs_0381 [My... 216 6e-54
gi|126432982|ref|YP_001068673.1| hypothetical protein Mjls_0369 ... 214 1e-53
gi|118471713|ref|YP_885036.1| hypothetical protein MSMEG_0626 [M... 213 5e-53
gi|120401447|ref|YP_951276.1| putative transmembrane protein [My... 212 5e-53
gi|145220923|ref|YP_001131601.1| hypothetical protein Mflv_0319 ... 190 3e-46
gi|169629310|ref|YP_001702959.1| hypothetical protein MAB_2224c ... 172 7e-41
gi|317506277|ref|ZP_07964092.1| hypothetical protein HMPREF9336_... 147 3e-33
gi|317506402|ref|ZP_07964208.1| subtilase [Segniliparus rugosus ... 132 1e-28
gi|296393177|ref|YP_003658061.1| hypothetical protein Srot_0750 ... 129 8e-28
gi|108802522|ref|YP_642718.1| hypothetical protein Mmcs_5562 [My... 67.0 4e-09
gi|317506404|ref|ZP_07964209.1| homeobox protein MSH-B [Segnilip... 45.1 0.015
gi|333976352|gb|EGL77221.1| Hep/Hag repeat protein [Veillonella ... 39.3 0.95
gi|294792353|ref|ZP_06757500.1| hemagglutinin superfamily [Veill... 38.5 1.5
gi|339500649|ref|YP_004698684.1| hypothetical protein Spica_2049... 38.1 1.7
gi|282848721|ref|ZP_06258116.1| Hep/Hag repeat protein [Veillone... 37.0 5.0
gi|309792337|ref|ZP_07686807.1| hypothetical protein OSCT_2758 [... 37.0 5.0
gi|210075767|ref|XP_502984.2| YALI0D18403p [Yarrowia lipolytica]... 36.2 6.9
>gi|15607433|ref|NP_214806.1| transmembrane protein [Mycobacterium tuberculosis H37Rv]
gi|148660058|ref|YP_001281581.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra]
gi|167967143|ref|ZP_02549420.1| putative conserved transmembrane protein [Mycobacterium tuberculosis
H37Ra]
gi|307082773|ref|ZP_07491886.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|81343126|sp|O53696.1|ECCE3_MYCTU RecName: Full=ESX-3 secretion system protein EccE3; AltName:
Full=ESX conserved component E3; AltName: Full=Type VII secretion
system protein EccE3; Short=T7SS protein EccE3
gi|2909481|emb|CAA17367.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis
H37Rv]
gi|148504210|gb|ABQ72019.1| putative conserved transmembrane protein [Mycobacterium tuberculosis
H37Ra]
gi|308367505|gb|EFP56356.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
Length=331
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/331 (100%), Positives = 331/331 (100%), Gaps = 0/331 (0%)
Query 1 MNPIPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTI 60
MNPIPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTI
Sbjct 1 MNPIPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTI 60
Query 61 ARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRI 120
ARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRI
Sbjct 61 ARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRI 120
Query 121 TSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGT 180
TSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGT
Sbjct 121 TSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGT 180
Query 181 AAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALE 240
AAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALE
Sbjct 181 AAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALE 240
Query 241 IAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHT 300
IAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHT
Sbjct 241 IAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHT 300
Query 301 DAPADLLTRLHWPTPTAGAHRAPLTNAVSRT 331
DAPADLLTRLHWPTPTAGAHRAPLTNAVSRT
Sbjct 301 DAPADLLTRLHWPTPTAGAHRAPLTNAVSRT 331
>gi|15839678|ref|NP_334715.1| hypothetical protein MT0305 [Mycobacterium tuberculosis CDC1551]
gi|31791471|ref|NP_853964.1| transmembrane protein [Mycobacterium bovis AF2122/97]
gi|121636207|ref|YP_976430.1| putative transmembrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
58 more sequence titles
Length=331
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/331 (99%), Positives = 331/331 (100%), Gaps = 0/331 (0%)
Query 1 MNPIPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTI 60
MNPIPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTI
Sbjct 1 MNPIPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTI 60
Query 61 ARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRI 120
ARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRI
Sbjct 61 ARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRI 120
Query 121 TSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGT 180
TSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGT
Sbjct 121 TSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGT 180
Query 181 AAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALE 240
AAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSA+AELPDTLPAIRSRPAQETWIALE
Sbjct 181 AAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSADAELPDTLPAIRSRPAQETWIALE 240
Query 241 IAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHT 300
IAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHT
Sbjct 241 IAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHT 300
Query 301 DAPADLLTRLHWPTPTAGAHRAPLTNAVSRT 331
DAPADLLTRLHWPTPTAGAHRAPLTNAVSRT
Sbjct 301 DAPADLLTRLHWPTPTAGAHRAPLTNAVSRT 331
>gi|298523763|ref|ZP_07011172.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|298493557|gb|EFI28851.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=331
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/331 (99%), Positives = 330/331 (99%), Gaps = 0/331 (0%)
Query 1 MNPIPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTI 60
MNPIPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTI
Sbjct 1 MNPIPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTI 60
Query 61 ARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRI 120
ARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRI
Sbjct 61 ARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRI 120
Query 121 TSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGT 180
TSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGT
Sbjct 121 TSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGT 180
Query 181 AAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALE 240
AAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSA AELPDTLPAIRSRPAQETWIALE
Sbjct 181 AAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSAGAELPDTLPAIRSRPAQETWIALE 240
Query 241 IAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHT 300
IAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHT
Sbjct 241 IAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHT 300
Query 301 DAPADLLTRLHWPTPTAGAHRAPLTNAVSRT 331
DAPADLLTRLHWPTPTAGAHRAPLTNAVSRT
Sbjct 301 DAPADLLTRLHWPTPTAGAHRAPLTNAVSRT 331
>gi|289445831|ref|ZP_06435575.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
gi|289418789|gb|EFD15990.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
Length=331
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/331 (99%), Positives = 330/331 (99%), Gaps = 0/331 (0%)
Query 1 MNPIPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTI 60
MNPIPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTI
Sbjct 1 MNPIPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTI 60
Query 61 ARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRI 120
ARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRI
Sbjct 61 ARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRI 120
Query 121 TSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGT 180
TSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGT
Sbjct 121 TSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGT 180
Query 181 AAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALE 240
AAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSA+AELPDTLPAIRSRPAQETWIALE
Sbjct 181 AAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSADAELPDTLPAIRSRPAQETWIALE 240
Query 241 IAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHT 300
IAYAAGSSTRYTVAA CALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHT
Sbjct 241 IAYAAGSSTRYTVAATCALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHT 300
Query 301 DAPADLLTRLHWPTPTAGAHRAPLTNAVSRT 331
DAPADLLTRLHWPTPTAGAHRAPLTNAVSRT
Sbjct 301 DAPADLLTRLHWPTPTAGAHRAPLTNAVSRT 331
>gi|341600223|emb|CCC62893.1| probable conserved transmembrane protein [Mycobacterium bovis
BCG str. Moreau RDJ]
Length=331
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/331 (99%), Positives = 330/331 (99%), Gaps = 0/331 (0%)
Query 1 MNPIPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTI 60
MNPIPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTI
Sbjct 1 MNPIPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTI 60
Query 61 ARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRI 120
ARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRI
Sbjct 61 ARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRI 120
Query 121 TSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGT 180
TSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGT
Sbjct 121 TSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGT 180
Query 181 AAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALE 240
AAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSA+AELPDTLPAIRSRPAQETWIALE
Sbjct 181 AAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSADAELPDTLPAIRSRPAQETWIALE 240
Query 241 IAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHT 300
IAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGN VPALTALDPRSTRRLDGHT
Sbjct 241 IAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNRVPALTALDPRSTRRLDGHT 300
Query 301 DAPADLLTRLHWPTPTAGAHRAPLTNAVSRT 331
DAPADLLTRLHWPTPTAGAHRAPLTNAVSRT
Sbjct 301 DAPADLLTRLHWPTPTAGAHRAPLTNAVSRT 331
>gi|254230666|ref|ZP_04923993.1| hypothetical protein TBCG_00289 [Mycobacterium tuberculosis C]
gi|124599725|gb|EAY58735.1| hypothetical protein TBCG_00289 [Mycobacterium tuberculosis C]
Length=324
Score = 625 bits (1613), Expect = 2e-177, Method: Compositional matrix adjust.
Identities = 322/324 (99%), Positives = 323/324 (99%), Gaps = 0/324 (0%)
Query 8 PGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIARRGLAI 67
PGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIARRGLAI
Sbjct 1 PGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIARRGLAI 60
Query 68 LRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRITSRVTAS 127
LRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRITSRVT S
Sbjct 61 LRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRITSRVTPS 120
Query 128 GDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGTAAPDEIP 187
GDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGTAAPDEIP
Sbjct 121 GDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGTAAPDEIP 180
Query 188 ALVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALEIAYAAGS 247
ALVAADSRETWRGMRHTDSDYVAAYRVSA+AELPDTLPAIRSRPAQETWIALEIAYAAGS
Sbjct 181 ALVAADSRETWRGMRHTDSDYVAAYRVSADAELPDTLPAIRSRPAQETWIALEIAYAAGS 240
Query 248 STRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHTDAPADLL 307
STRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHTDAPADLL
Sbjct 241 STRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHTDAPADLL 300
Query 308 TRLHWPTPTAGAHRAPLTNAVSRT 331
TRLHWPTPTAGAHRAPLTNAVSRT
Sbjct 301 TRLHWPTPTAGAHRAPLTNAVSRT 324
>gi|289760403|ref|ZP_06519781.1| conserved transmembrane protein [Mycobacterium tuberculosis GM
1503]
gi|289707909|gb|EFD71925.1| conserved transmembrane protein [Mycobacterium tuberculosis GM
1503]
Length=326
Score = 587 bits (1513), Expect = 9e-166, Method: Compositional matrix adjust.
Identities = 301/304 (99%), Positives = 303/304 (99%), Gaps = 0/304 (0%)
Query 28 PWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIARRGLAILRRRRRIAEPATCTRTTVLV 87
P +STRDYVLLGVAAAVVIGLFGFWRGLYFTTIARRGLAILRRRRRIAEPATCTRTTVLV
Sbjct 23 PGKSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIARRGLAILRRRRRIAEPATCTRTTVLV 82
Query 88 WVGPPASDTNVLPLTLIARYLDRYGIRADTIRITSRVTASGDCRTWVGLTVVADDNLAAL 147
WVGPPASDTNVLPLTLIARYLDRYGIRADTIRITSRVTASGDCRTWVGLTVVADDNLAAL
Sbjct 83 WVGPPASDTNVLPLTLIARYLDRYGIRADTIRITSRVTASGDCRTWVGLTVVADDNLAAL 142
Query 148 QARSARIPLQETAQVAARRLADHLREIGWEAGTAAPDEIPALVAADSRETWRGMRHTDSD 207
QARSARIPLQETAQVAARRLADHLREIGWEAGTAAPDEIPALVAADSRETWRGMRHTDSD
Sbjct 143 QARSARIPLQETAQVAARRLADHLREIGWEAGTAAPDEIPALVAADSRETWRGMRHTDSD 202
Query 208 YVAAYRVSANAELPDTLPAIRSRPAQETWIALEIAYAAGSSTRYTVAAACALRTDWRPGG 267
YVAAYRVSA+AELPDTLPAIRSRPAQETWIALEIAYAAGSSTRYTVAAACALRTDWRPGG
Sbjct 203 YVAAYRVSADAELPDTLPAIRSRPAQETWIALEIAYAAGSSTRYTVAAACALRTDWRPGG 262
Query 268 TAPVAGLLPQHGNHVPALTALDPRSTRRLDGHTDAPADLLTRLHWPTPTAGAHRAPLTNA 327
TAPVAGLLPQHGNHVPALTALDPRSTRRLDGHTDAPADLLTRLHWPTPTAGAHRAPLTNA
Sbjct 263 TAPVAGLLPQHGNHVPALTALDPRSTRRLDGHTDAPADLLTRLHWPTPTAGAHRAPLTNA 322
Query 328 VSRT 331
VSRT
Sbjct 323 VSRT 326
>gi|289568205|ref|ZP_06448432.1| conserved membrane protein [Mycobacterium tuberculosis T17]
gi|289541958|gb|EFD45607.1| conserved membrane protein [Mycobacterium tuberculosis T17]
Length=306
Score = 560 bits (1443), Expect = 1e-157, Method: Compositional matrix adjust.
Identities = 287/288 (99%), Positives = 288/288 (100%), Gaps = 0/288 (0%)
Query 1 MNPIPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTI 60
MNPIPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTI
Sbjct 1 MNPIPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTI 60
Query 61 ARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRI 120
ARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRI
Sbjct 61 ARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRI 120
Query 121 TSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGT 180
TSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGT
Sbjct 121 TSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGT 180
Query 181 AAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALE 240
AAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSA+AELPDTLPAIRSRPAQETWIALE
Sbjct 181 AAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSADAELPDTLPAIRSRPAQETWIALE 240
Query 241 IAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTAL 288
IAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTAL
Sbjct 241 IAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTAL 288
>gi|289752325|ref|ZP_06511703.1| LOW QUALITY PROTEIN: transmembrane protein [Mycobacterium tuberculosis
EAS054]
gi|289692912|gb|EFD60341.1| LOW QUALITY PROTEIN: transmembrane protein [Mycobacterium tuberculosis
EAS054]
Length=308
Score = 556 bits (1434), Expect = 1e-156, Method: Compositional matrix adjust.
Identities = 286/287 (99%), Positives = 287/287 (100%), Gaps = 0/287 (0%)
Query 45 VIGLFGFWRGLYFTTIARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLI 104
VIGLFGFWRGLYFTTIARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLI
Sbjct 22 VIGLFGFWRGLYFTTIARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLI 81
Query 105 ARYLDRYGIRADTIRITSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAA 164
ARYLDRYGIRADTIRITSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAA
Sbjct 82 ARYLDRYGIRADTIRITSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAA 141
Query 165 RRLADHLREIGWEAGTAAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTL 224
RRLADHLREIGWEAGTAAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSA+AELPDTL
Sbjct 142 RRLADHLREIGWEAGTAAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSADAELPDTL 201
Query 225 PAIRSRPAQETWIALEIAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPA 284
PAIRSRPAQETWIALEIAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPA
Sbjct 202 PAIRSRPAQETWIALEIAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPA 261
Query 285 LTALDPRSTRRLDGHTDAPADLLTRLHWPTPTAGAHRAPLTNAVSRT 331
LTALDPRSTRRLDGHTDAPADLLTRLHWPTPTAGAHRAPLTNAVSRT
Sbjct 262 LTALDPRSTRRLDGHTDAPADLLTRLHWPTPTAGAHRAPLTNAVSRT 308
>gi|15828359|ref|NP_302622.1| hypothetical protein ML2527 [Mycobacterium leprae TN]
gi|221230836|ref|YP_002504252.1| hypothetical protein MLBr_02527 [Mycobacterium leprae Br4923]
gi|13093789|emb|CAC32058.1| conserved membrane protein [Mycobacterium leprae]
gi|219933943|emb|CAR72626.1| conserved membrane protein [Mycobacterium leprae Br4923]
Length=339
Score = 372 bits (956), Expect = 3e-101, Method: Compositional matrix adjust.
Identities = 205/333 (62%), Positives = 237/333 (72%), Gaps = 9/333 (2%)
Query 3 PIPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIAR 62
P WPG R+TL LLAV+P +AYPW TR Y LLG+ A VV+ LFG+WRGLY TTI R
Sbjct 8 PAAMWPGSSRITLALLAVMPALMAYPWWFTRSYWLLGIVALVVVVLFGWWRGLYLTTILR 67
Query 63 RGLAIL-RRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRIT 121
R LA++ RR R ++ + TRTTVL+ +GPP ++V+PL LI RYL+ YGIRAD+IRIT
Sbjct 68 RRLAMMWRRGRPVSASGSATRTTVLLRLGPPVGGSDVIPLPLITRYLNCYGIRADSIRIT 127
Query 122 SRVTASGD--CRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAG 179
SR S C TW+GLTV A NLAALQARS+RIPLQETAQVAARRLADHLREIGWE
Sbjct 128 SRNNESDGALCETWIGLTVSAAKNLAALQARSSRIPLQETAQVAARRLADHLREIGWEVS 187
Query 180 TAAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIAL 239
A PD IP L+ A ETWRGM+ SDY+ AYRV+ + ELP TL A+R PA+ETW AL
Sbjct 188 LAVPDGIPRLITAAGDETWRGMQQ-GSDYLTAYRVNVDDELPGTLDAVRLYPARETWTAL 246
Query 240 EIAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGH 299
EIA SS R T+AAACA TD P G AP+AGL PQHGNH PAL LD S +RLDGH
Sbjct 247 EIACPDSSSNRNTIAAACAFLTDTAPQGAAPLAGLTPQHGNHRPALAVLDLFSAQRLDGH 306
Query 300 TDAPADLLTRLHWPTPTAG-----AHRAPLTNA 327
TD ADLLTRL WP P AG A R+P +A
Sbjct 307 TDTDADLLTRLRWPAPAAGVSSCTATRSPAVSA 339
>gi|118466437|ref|YP_883984.1| hypothetical protein MAV_4860 [Mycobacterium avium 104]
gi|118167724|gb|ABK68621.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=330
Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 203/326 (63%), Positives = 238/326 (74%), Gaps = 6/326 (1%)
Query 8 PGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIARRGLAI 67
PG GR+TL LLAVVP A+AYPW S RDY LLG+AAAV+I LFG+W GLYFTT+ RR LAI
Sbjct 9 PGSGRITLALLAVVPAAMAYPWHSPRDYWLLGIAAAVLIVLFGWWGGLYFTTLLRRRLAI 68
Query 68 LRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRITSRVTAS 127
+ R + TTVL+ VG PA ++ LPL LIA YLDRYGIRAD +RITSR AS
Sbjct 69 IGRHNAVRPQRPDPATTVLIRVGAPADGSDALPLPLIAGYLDRYGIRADKVRITSRDNAS 128
Query 128 GDCR--TWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGTAAPDE 185
+ R TW+GLTV A DNLAALQARS RIPL ETAQVAARRLADHLRE GWEAG PD+
Sbjct 129 DESRRQTWIGLTVSAPDNLAALQARSPRIPLAETAQVAARRLADHLRETGWEAGVVPPDD 188
Query 186 IPALVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALEIAYAA 245
+P L+ ++ RE WRG++ SDY+AAY++ + LP+TL AIRS PA+E+ +ALEI A
Sbjct 189 VPRLLTSNPRERWRGVQRGPSDYLAAYQIPVDESLPETLEAIRSYPARESCVALEI---A 245
Query 246 GSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHTDAPAD 305
G T+A ACA +TD P AP+AGL+PQ GNH+PALTALD ST RLDGHT APAD
Sbjct 246 GDKAAPTIAVACAFQTDTAPDRGAPLAGLIPQRGNHLPALTALDLLSTGRLDGHTAAPAD 305
Query 306 LLTRLHWPTPTAGAHRAPLTNAVSRT 331
LL RLHWPT A A A T A +RT
Sbjct 306 LLDRLHWPTQGAPAGDAD-TVAAART 330
>gi|336460253|gb|EGO39156.1| type VII secretion protein EccE [Mycobacterium avium subsp. paratuberculosis
S397]
Length=330
Score = 355 bits (911), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 200/326 (62%), Positives = 236/326 (73%), Gaps = 6/326 (1%)
Query 8 PGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIARRGLAI 67
PG GR+TL LLAVVP A+AYPW S RDY LLG+AA V+I LFG+W GLYFTT+ RR LA+
Sbjct 9 PGSGRITLALLAVVPAAMAYPWHSPRDYWLLGIAAVVLIVLFGWWGGLYFTTLLRRRLAM 68
Query 68 LRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRITSRVTAS 127
+ R + TTVL+ VG PA ++ LPL LIA YLDRYGIRAD +RITSR AS
Sbjct 69 IGRHNAVRPQRPDPATTVLIRVGAPADGSDALPLPLIAGYLDRYGIRADKVRITSRDNAS 128
Query 128 GDCR--TWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGTAAPDE 185
+ R TW+GLTV A DNLAALQARS RIPL ETAQVAARRLADHLRE GWEAG PD+
Sbjct 129 DESRRQTWIGLTVSAPDNLAALQARSPRIPLAETAQVAARRLADHLRETGWEAGVVPPDD 188
Query 186 IPALVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALEIAYAA 245
+P L+ ++ RE WRG++ SDY+AAY++ + LP+TL AIRS PA+E+ +ALEI A
Sbjct 189 VPRLLTSNPRERWRGVQRGPSDYLAAYQIPVDESLPETLEAIRSYPARESCVALEI---A 245
Query 246 GSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHTDAPAD 305
G T+A ACA +TD P AP+AGL+PQ GNH+PALTALD ST RLDGHT A AD
Sbjct 246 GDKAAPTIAVACAFQTDTAPDRGAPLAGLIPQRGNHLPALTALDLLSTGRLDGHTAATAD 305
Query 306 LLTRLHWPTPTAGAHRAPLTNAVSRT 331
LL RLHWPT A A A T A +RT
Sbjct 306 LLDRLHWPTQGAPAGDAD-TVAAART 330
>gi|183980579|ref|YP_001848870.1| transmembrane protein [Mycobacterium marinum M]
gi|183173905|gb|ACC39015.1| conserved transmembrane protein [Mycobacterium marinum M]
Length=337
Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 201/330 (61%), Positives = 239/330 (73%), Gaps = 8/330 (2%)
Query 8 PGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIARRGLAI 67
PG GR+TL LLAVVP +AYPW S RDY L+G+AA VVI LF +WRGLY TTI R +A+
Sbjct 10 PGSGRITLALLAVVPAVMAYPWHSRRDYWLIGIAAFVVIVLFAWWRGLYLTTILHRRVAM 69
Query 68 LRRRRRIAEPATC--TRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRITSRVT 125
+RRR AEP T TTV + +GPPASD +VLPL +IARYL+ YGIR D IRIT R T
Sbjct 70 MRRRP--AEPGAEADTSTTVTLRIGPPASDIDVLPLPVIARYLNCYGIRVDAIRITGRTT 127
Query 126 ASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGTAAPDE 185
SG+ +TW+GLTV A NLAALQAR+ARIPL ETA+V ARRLADHLREIGWE A ++
Sbjct 128 GSGETQTWIGLTVSAATNLAALQARAARIPLHETARVTARRLADHLREIGWEVSLVAAED 187
Query 186 IPALVAADS----RETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALEI 241
+P+L+ DS RETWRG++H DS+Y+AAYRV +A LPDTL I S PA ETW+A+EI
Sbjct 188 LPSLLDPDSDHALRETWRGVQHGDSEYLAAYRVIVDAALPDTLAEIWSHPALETWMAIEI 247
Query 242 AYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHTD 301
A S Y+VAAACA RTD +P AP+A L+PQ GNH P L A++ STR LDG+ D
Sbjct 248 AARGRSGADYSVAAACAFRTDEQPAVAAPLATLIPQRGNHGPTLAAMELSSTRALDGYAD 307
Query 302 APADLLTRLHWPTPTAGAHRAPLTNAVSRT 331
AP +LL RL W TP AG HRA T SRT
Sbjct 308 APENLLMRLVWSTPGAGLHRAAPTETASRT 337
>gi|240172734|ref|ZP_04751393.1| putative transmembrane protein [Mycobacterium kansasii ATCC 12478]
Length=332
Score = 345 bits (884), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 209/331 (64%), Positives = 243/331 (74%), Gaps = 1/331 (0%)
Query 1 MNPIPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTI 60
+N IP PG GR+ + LLA+VP A+AYPWQSTRDY L+G+AA VVI LFG+WRGL+FTTI
Sbjct 3 LNSIPR-PGAGRIVVALLAMVPAAMAYPWQSTRDYWLIGIAAVVVIVLFGWWRGLHFTTI 61
Query 61 ARRGLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRI 120
RR LA++RRRR +PAT RTT L+ +GPPA VLPL LIA YLDRYGIRAD +RI
Sbjct 62 VRRRLAMMRRRRSGTDPATEVRTTALLRIGPPAPGLEVLPLPLIAGYLDRYGIRADAVRI 121
Query 121 TSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGT 180
T V A+G+ W+GLTV A NLAALQARS RIPLQ+TA+VAARRLADHLREIGW+ GT
Sbjct 122 TGHVDAAGERELWIGLTVSAAANLAALQARSRRIPLQQTAEVAARRLADHLREIGWDVGT 181
Query 181 AAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALE 240
D+ P L+A RETWR MRH DSDY+AAYRVS +A LP+TL A+ S PA+ETW ALE
Sbjct 182 VGYDDAPRLLARADRETWRCMRHGDSDYLAAYRVSVDAALPETLAAVWSHPARETWAALE 241
Query 241 IAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHT 300
I A TVA ACA R+D RP G AP+AGL Q G+ AL AL+P STRRLDG T
Sbjct 242 IGAAGRPGGPPTVAVACAFRSDARPDGAAPLAGLTLQRGSQWLALAALEPSSTRRLDGPT 301
Query 301 DAPADLLTRLHWPTPTAGAHRAPLTNAVSRT 331
DAP LL L WP P+A A LT+A SRT
Sbjct 302 DAPDGLLEGLVWPIPSAWAAHTSLTDAASRT 332
>gi|254821600|ref|ZP_05226601.1| hypothetical protein MintA_16822 [Mycobacterium intracellulare
ATCC 13950]
Length=325
Score = 342 bits (878), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 194/316 (62%), Positives = 225/316 (72%), Gaps = 10/316 (3%)
Query 21 VPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIARRGLAILRRRRRIAEPATC 80
+P +A PW+S RDY LLG+AAAVVI LFG+W GLYFTT+ RR LAI+ R
Sbjct 1 MPAVMACPWRSPRDYWLLGIAAAVVIVLFGWWGGLYFTTLVRRRLAIIGRANAFTPQPPA 60
Query 81 TRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRITSRVTASGDCR--TWVGLTV 138
T TT LV VG P D++VLPL LIA YLDRYGIRAD IRITSR AS R TW+GLTV
Sbjct 61 TATTALVRVGAPEDDSDVLPLPLIAGYLDRYGIRADKIRITSRDNASDASRRETWIGLTV 120
Query 139 VADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGTAAPDEIPALVAADSRETW 198
A +NLAAL+ARS RIPLQETAQVAARRLADHLREIGWEA APD++P L+ ++ RE W
Sbjct 121 SAPENLAALRARSPRIPLQETAQVAARRLADHLREIGWEATAVAPDDVPRLLTSNPRERW 180
Query 199 RGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALEIAYAAGSSTRYTVAAACA 258
RG++ SDY+AAY++ + LP+TL AIRS A+ET ALEI AG TVA ACA
Sbjct 181 RGVQRGASDYIAAYQIRVDEALPETLDAIRSHAARETCTALEI---AGDKAHPTVAVACA 237
Query 259 LRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHTDAPADLLTRLHWPTPTAG 318
+TD P TAP+ GL PQ GNH+PALTALD ST RLDGHT APA LL +LHWPT G
Sbjct 238 FQTDTPPERTAPLDGLTPQRGNHLPALTALDLLSTARLDGHTTAPAGLLAQLHWPTLVGG 297
Query 319 AHRA-----PLTNAVS 329
AHRA P TN+ +
Sbjct 298 AHRASSAGGPETNSAT 313
>gi|296167646|ref|ZP_06849917.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897113|gb|EFG76725.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=330
Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 202/326 (62%), Positives = 236/326 (73%), Gaps = 7/326 (2%)
Query 4 IPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIARR 63
IP+ PG GR+TL LAVVP A+AYPW STRDY +LG+AAAVV+ LFG WRG+YFTT+ RR
Sbjct 7 IPT-PGPGRITLAALAVVPAAMAYPWHSTRDYWVLGIAAAVVLALFGCWRGMYFTTLLRR 65
Query 64 GLAILRRRRRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRITSR 123
LAI+ R A + T TT L+ VG A + LPL L+A YLDRYGIRAD IRITSR
Sbjct 66 RLAIMGHRESAAAE-SGTATTALLRVGARADGADALPLPLLASYLDRYGIRADKIRITSR 124
Query 124 VTASGDCR--TWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGTA 181
AS R TW+GLT+ A DNLAAL+ARS RIPL ETAQVAARRLADHLREIGWEA
Sbjct 125 ANASDASRRETWIGLTISAADNLAALKARSPRIPLYETAQVAARRLADHLREIGWEATAV 184
Query 182 APDEIPALVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALEI 241
APD+IP L+ +++RE+WRG++ SDY+AAYR+ + LP TL IRS A ET IALEI
Sbjct 185 APDDIPRLLTSNARESWRGVQRGTSDYLAAYRIPVDETLPQTLAEIRSSSALETCIALEI 244
Query 242 AYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHTD 301
AG + R T+AAACAL+TD +P AP+AGL Q GNH+ ALTALD STRRLDGH+D
Sbjct 245 ---AGDAARPTIAAACALQTDTQPERRAPLAGLASQAGNHLRALTALDLLSTRRLDGHSD 301
Query 302 APADLLTRLHWPTPTAGAHRAPLTNA 327
AP LL L WPT GAHR P A
Sbjct 302 APPGLLAELDWPTEAGGAHREPAAEA 327
>gi|342859223|ref|ZP_08715877.1| hypothetical protein MCOL_10103 [Mycobacterium colombiense CECT
3035]
gi|342133464|gb|EGT86667.1| hypothetical protein MCOL_10103 [Mycobacterium colombiense CECT
3035]
Length=323
Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 186/317 (59%), Positives = 225/317 (71%), Gaps = 5/317 (1%)
Query 15 LVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIARRGLAILRRRRRI 74
+ LLA+VP A+AYPW+ RDY LLG+AAAVV+ LFG+W G+Y T I RR LA++ R +
Sbjct 1 MALLAIVPAAMAYPWRGPRDYWLLGIAAAVVVVLFGWWGGMYLTAIVRRRLAMIARGNAV 60
Query 75 AEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRITSRVTASGDCR--T 132
+ T L+ +G P D++VLPL LIA YLDRYGIRAD IRITSR A+ R T
Sbjct 61 PSATSDAAATALIRLGAPEDDSDVLPLPLIASYLDRYGIRADKIRITSRDNAADPSRRET 120
Query 133 WVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGTAAPDEIPALVAA 192
W+GLTV A DNLAALQARS RIPL ETAQVAARRLADHLREIGW+A T A +++P L+ +
Sbjct 121 WIGLTVSAPDNLAALQARSPRIPLHETAQVAARRLADHLREIGWDATTVAAEDVPRLLTS 180
Query 193 DSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALEIAYAAGSSTRYT 252
+ RE WRG++ SDY+AAYR+ + LP+TL AIR A+ET ALE+ AG + R T
Sbjct 181 NPRERWRGVQRGASDYLAAYRIQVDDALPETLAAIREYAARETCTALEV---AGDNRRPT 237
Query 253 VAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHTDAPADLLTRLHW 312
VA ACA +T+ P G APV GL PQ GNH+PALTALD ST RLDGHT AP DLL +L+W
Sbjct 238 VAVACAFQTETAPDGKAPVDGLTPQRGNHLPALTALDLLSTYRLDGHTAAPQDLLAQLNW 297
Query 313 PTPTAGAHRAPLTNAVS 329
PT AHR T A S
Sbjct 298 PTLAGAAHRRGETGAES 314
>gi|118616928|ref|YP_905260.1| transmembrane protein [Mycobacterium ulcerans Agy99]
gi|118569038|gb|ABL03789.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99]
Length=316
Score = 329 bits (843), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 190/318 (60%), Positives = 229/318 (73%), Gaps = 8/318 (2%)
Query 20 VVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIARRGLAILRRRRRIAEPAT 79
+VP +AYPW S RDY L+G+AA VVI LF +WRGLY TTI R +A++RRR AEP
Sbjct 1 MVPAVMAYPWHSRRDYWLIGIAAFVVIVLFAWWRGLYLTTILHRRVAMMRRRP--AEPGA 58
Query 80 C--TRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRITSRVTASGDCRTWVGLT 137
T TTV + +GPPASD +VLPL +IARYL+ YGIR D IRIT R T SG+ +TW+GLT
Sbjct 59 EADTSTTVTLRIGPPASDIDVLPLPVIARYLNCYGIRVDAIRITGRTTGSGETQTWIGLT 118
Query 138 VVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGTAAPDEIPALVAADS--- 194
V A NLAALQAR+ARIPL ETA+V ARRLADHLREIGWE A +++P+L+ DS
Sbjct 119 VSAATNLAALQARAARIPLHETARVTARRLADHLREIGWEVSLVAAEDLPSLLDPDSDHA 178
Query 195 -RETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALEIAYAAGSSTRYTV 253
RETWRG++H DS+Y+AAYRV +A LPDTL I S PA ETW+A+EIA + Y+V
Sbjct 179 LRETWRGVQHGDSEYLAAYRVIVDAALPDTLAEIWSHPALETWMAIEIAARGRAGADYSV 238
Query 254 AAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHTDAPADLLTRLHWP 313
AAACA RTD +P AP+A L+PQ GNH P L A++ STR LDG+ DAP +LL RL W
Sbjct 239 AAACAFRTDEQPAVAAPLATLIPQRGNHGPTLAAMELSSTRALDGYADAPENLLMRLVWF 298
Query 314 TPTAGAHRAPLTNAVSRT 331
TP AG HRA T SRT
Sbjct 299 TPGAGLHRAAPTETASRT 316
>gi|254777301|ref|ZP_05218817.1| hypothetical protein MaviaA2_21891 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=256
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 155/242 (65%), Positives = 179/242 (74%), Gaps = 5/242 (2%)
Query 83 TTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRITSRVTASGDCR--TWVGLTVVA 140
TTVL+ VG PA ++ LPL LIA YLDRYGIRAD +RITSR AS + R TW+GLTV A
Sbjct 10 TTVLIRVGAPADGSDALPLPLIAGYLDRYGIRADKVRITSRDNASDESRRQTWIGLTVSA 69
Query 141 DDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGTAAPDEIPALVAADSRETWRG 200
DNLAALQARS RIPL ETAQVAARRLADHLRE GWEAG PD+IP L+ ++ RE WRG
Sbjct 70 PDNLAALQARSPRIPLAETAQVAARRLADHLRETGWEAGVVPPDDIPRLLTSNPRERWRG 129
Query 201 MRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALEIAYAAGSSTRYTVAAACALR 260
++ SDY+AAY++ + LP+TL AIRS PA+E+ ALEI AG T+A ACA +
Sbjct 130 VQRGPSDYLAAYQIPVDESLPETLEAIRSYPARESCAALEI---AGDKAAPTIAVACAFQ 186
Query 261 TDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHTDAPADLLTRLHWPTPTAGAH 320
TD P AP+AGL+PQ GNH+PALTALD ST RLDGHT APADLL RLHWPT A A
Sbjct 187 TDTAPDRGAPLAGLIPQRGNHLPALTALDLLSTGRLDGHTAAPADLLDRLHWPTQGAPAG 246
Query 321 RA 322
A
Sbjct 247 DA 248
>gi|41409886|ref|NP_962722.1| hypothetical protein MAP3788 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398718|gb|AAS06338.1| hypothetical protein MAP_3788 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=240
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 145/233 (63%), Positives = 172/233 (74%), Gaps = 5/233 (2%)
Query 92 PASDTNVLPLTLIARYLDRYGIRADTIRITSRVTASGDCR--TWVGLTVVADDNLAALQA 149
P + ++ LPL LIA YLDRYGIRAD +RITSR AS + R TW+GLTV A DNLAALQA
Sbjct 3 PPNGSDALPLPLIAGYLDRYGIRADKVRITSRDNASDESRRQTWIGLTVSAPDNLAALQA 62
Query 150 RSARIPLQETAQVAARRLADHLREIGWEAGTAAPDEIPALVAADSRETWRGMRHTDSDYV 209
RS RIPL ETAQVAARRLADHLRE GWEAG PD++P L+ ++ RE WRG++ SDY+
Sbjct 63 RSPRIPLAETAQVAARRLADHLRETGWEAGVVPPDDVPRLLTSNPRERWRGVQRGPSDYL 122
Query 210 AAYRVSANAELPDTLPAIRSRPAQETWIALEIAYAAGSSTRYTVAAACALRTDWRPGGTA 269
AAY++ + LP+TL AIRS PA+++ +ALEI AG T+A ACA +TD P A
Sbjct 123 AAYQIPVDESLPETLEAIRSYPARQSCVALEI---AGDKAAPTIAVACAFQTDTAPDRGA 179
Query 270 PVAGLLPQHGNHVPALTALDPRSTRRLDGHTDAPADLLTRLHWPTPTAGAHRA 322
P+AGL+PQ GNH+PALTALD ST RLDGHT A ADLL RLHWPT A A A
Sbjct 180 PLAGLIPQRGNHLPALTALDLLSTGRLDGHTAATADLLDRLHWPTQGAPAGDA 232
>gi|240169018|ref|ZP_04747677.1| hypothetical protein MkanA1_06879 [Mycobacterium kansasii ATCC
12478]
Length=365
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 164/334 (50%), Positives = 200/334 (60%), Gaps = 12/334 (3%)
Query 3 PIPSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIAR 62
PI WP RVTL + + ALAYPW+ST D +L VA V+ L +WRG++ TT AR
Sbjct 8 PIIVWPDTWRVTLAVSVGIAAALAYPWRSTHDRWVLAVAVLSVVVLLSYWRGVHLTTNAR 67
Query 63 RGLAILR-------RRRRIAEPATCTRT-TVLVWVGPPASDTNVLPLTLIARYLDRYGIR 114
R +AI R RRR A+ T T L+ V P A + LPL LIA YLDRYGIR
Sbjct 68 RRMAITRGRRPGIHRRRGSLFSASIDETATALIRVEPRAGRRDALPLPLIASYLDRYGIR 127
Query 115 ADTIRITSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREI 174
D IRI + +G +TW+ LTV A NLAALQAR+A IPL +T V ARRLADHL E+
Sbjct 128 TDNIRIINNEKITGIGQTWIALTVSAIANLAALQARAAHIPLDQTTHVVARRLADHLHEL 187
Query 175 GWEAGTAAPDEIPALVAADSRETWRGMRHTDS-DYVAAYRVSANAELPDTLPAIRSRPAQ 233
GW A P ++P A RETWR + D DY+AAYR+ ELPD IRS P
Sbjct 188 GWTTRVARPGDLPQFGAGTGRETWRAVVRNDGVDYLAAYRIDITDELPDVFTQIRSHPVA 247
Query 234 ETWIALEIAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRST 293
E+W+ LEIA AA T +++ AAC RT P AP+AG+ PQHGNH AL ALDP +
Sbjct 248 ESWVVLEIARAA---TGFSLGAACVFRTAAMPRRRAPLAGMTPQHGNHRQALMALDPFAA 304
Query 294 RRLDGHTDAPADLLTRLHWPTPTAGAHRAPLTNA 327
+RL+GHT P +LL RL WP GA L+ A
Sbjct 305 QRLEGHTAVPDELLGRLLWPVLARGARAVRLSEA 338
>gi|333988940|ref|YP_004521554.1| transmembrane protein [Mycobacterium sp. JDM601]
gi|333484908|gb|AEF34300.1| transmembrane protein [Mycobacterium sp. JDM601]
Length=328
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 158/313 (51%), Positives = 194/313 (62%), Gaps = 11/313 (3%)
Query 8 PGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIARRGLAI 67
PG R+ LVLLAVVP LAYPW + RD +L V AV I L +W GL+ TTI RR LA+
Sbjct 11 PGPARIALVLLAVVPALLAYPWPTPRDRWVLAVGVAVAIVLLSWWHGLHLTTIVRRRLAM 70
Query 68 LRRRRRIA---EPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRITSRV 124
R R + RTT + + A+ + LPL++IA YL+RYG++AD +RITSR
Sbjct 71 SRSSRGTHTDRRAVSGARTTSALRIAAAAAG-DTLPLSVIAGYLNRYGLQADAVRITSRG 129
Query 125 T----ASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGT 180
T + + TW+GLT A NLAALQARS IPLQ TA +A RRLADHLREIGW+
Sbjct 130 TRPEAGADETDTWIGLTFSAARNLAALQARSPEIPLQRTADIAVRRLADHLREIGWDTTL 189
Query 181 AAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALE 240
A DEIP L+ + +RETWR + ++VAAY+V+ +A L DTL IR+ A ETW LE
Sbjct 190 VAADEIPPLIDSGARETWRSVVDGSGEHVAAYQVAIDAALGDTLSRIRASNAGETWTVLE 249
Query 241 IAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHT 300
A G R TVAAACALRT PGG AP+AGL+ + G H AL +L P S RLDG
Sbjct 250 FADDGG---RRTVAAACALRTGSAPGGAAPLAGLVSEQGKHRSALLSLHPLSGSRLDGGA 306
Query 301 DAPADLLTRLHWP 313
D L L WP
Sbjct 307 VLADDELAGLRWP 319
>gi|108797361|ref|YP_637558.1| hypothetical protein Mmcs_0381 [Mycobacterium sp. MCS]
gi|119866445|ref|YP_936397.1| hypothetical protein Mkms_0390 [Mycobacterium sp. KMS]
gi|108767780|gb|ABG06502.1| putative conserved transmembrane protein [Mycobacterium sp. MCS]
gi|119692534|gb|ABL89607.1| putative conserved transmembrane protein [Mycobacterium sp. KMS]
Length=317
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 148/307 (49%), Positives = 190/307 (62%), Gaps = 16/307 (5%)
Query 12 RVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIARRGLAILRRR 71
R+TL LL +P ALAYPWQ+ D+ LLGVA AVV+ LF +WRGL+ T + RR AIL R
Sbjct 4 RITLALLFALPAALAYPWQTDTDWWLLGVAIAVVVLLFAWWRGLFVTEMVRRRFAILTRN 63
Query 72 RRIA---EPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRITSRVTASG 128
RR EPA T L P D +PL L+A Y DRYG+RA +R+ SR A G
Sbjct 64 RRGGHRQEPAEHFATVALRVDEAPTGD---VPLALLAGYADRYGVRAHKVRVVSRDLA-G 119
Query 129 DCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGTAAP-DEIP 187
+ TW+ LTV A DNLAAL+ARS R+PL++T ++AARRL DHLRE+GW T P DE
Sbjct 120 ERTTWIALTVGAADNLAALRARSPRLPLRQTTEIAARRLTDHLRELGW---TVTPVDETA 176
Query 188 ALVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALEIAYAAGS 247
A V RETWRG+R ++ +VAAYRV+ + ++ DTL A+ + + ETW A++I A S
Sbjct 177 APVPHPVRETWRGLR-SEHGHVAAYRVTVDDQVSDTLAAVAALLSAETWTAIDIVCGAES 235
Query 248 STRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGH-TDAPADL 306
+ CA+RT+ RP AP+ L PQ G H PA AL P + +RL+G D
Sbjct 236 P---EIVVGCAVRTEDRPKAKAPLPALTPQRGRHRPAAEALHPLADQRLEGRPVPVTGDG 292
Query 307 LTRLHWP 313
L RL WP
Sbjct 293 LHRLRWP 299
>gi|126432982|ref|YP_001068673.1| hypothetical protein Mjls_0369 [Mycobacterium sp. JLS]
gi|126232782|gb|ABN96182.1| putative conserved transmembrane protein [Mycobacterium sp. JLS]
Length=317
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 147/307 (48%), Positives = 189/307 (62%), Gaps = 16/307 (5%)
Query 12 RVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIARRGLAILRRR 71
R+TL LL +P ALAYPWQ+ D+ LLGVA AVV+ LF +WRGL+ T + RR AIL R
Sbjct 4 RITLALLFALPAALAYPWQTDTDWWLLGVAIAVVVLLFAWWRGLFVTEMVRRRFAILTRN 63
Query 72 RRIA---EPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRITSRVTASG 128
RR EPA T L P D +PL L+A Y DRYG+RA +R+ SR A G
Sbjct 64 RRGGHRQEPAEHFATVALRVDEAPTGD---VPLALLAGYADRYGVRAHKVRVVSRDLA-G 119
Query 129 DCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGTAAP-DEIP 187
+ TW+ LTV A DNLAAL+ARS R+PL++T ++AARRL DHLRE+GW T P DE
Sbjct 120 ERTTWIALTVGAADNLAALRARSPRLPLRQTTEIAARRLTDHLRELGW---TVTPVDETA 176
Query 188 ALVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALEIAYAAGS 247
A V RETWRG+R ++ +VAAYRV+ + ++ DTL A+ + + ETW A++I A S
Sbjct 177 APVPHPVRETWRGLR-SEHGHVAAYRVTVDDQVSDTLAAVAALLSAETWTAIDIVCGAES 235
Query 248 STRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGH-TDAPADL 306
+ CA+RT+ RP P+ L PQ G H PA AL P + +RL+G D
Sbjct 236 P---EIVVGCAVRTEDRPKAKEPLPALTPQRGRHRPAAEALHPLADQRLEGRPVPVTGDG 292
Query 307 LTRLHWP 313
L RL WP
Sbjct 293 LHRLRWP 299
>gi|118471713|ref|YP_885036.1| hypothetical protein MSMEG_0626 [Mycobacterium smegmatis str.
MC2 155]
gi|118173000|gb|ABK73896.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=309
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 139/290 (48%), Positives = 170/290 (59%), Gaps = 16/290 (5%)
Query 12 RVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIARRGLAILRRR 71
R+ L L VV LA PWQ+T +LGV+ A VI L +W+G++ TT R LA++RR
Sbjct 4 RIALASLFVVAAVLAQPWQTTTQRWVLGVSIAAVIVLLAWWKGMFLTTRIGRALAMVRRN 63
Query 72 RRIAEPATCT---RTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRITSRVTASG 128
R AE T R TV++ V P A L ++ YLDRYGI D +RIT R A G
Sbjct 64 R--AEDTVETDAHRATVVLRVDPAAPAQ----LPVVVGYLDRYGITCDKVRITHR-DAGG 116
Query 129 DCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGTAAPDEIPA 188
R+W+ LTV A DNLAALQARSARIPLQ+T +V RRLADHLRE GW + P
Sbjct 117 TRRSWISLTVDAVDNLAALQARSARIPLQDTTEVVGRRLADHLREQGWTVTVVEGVDTPL 176
Query 189 LVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALEIAYAAGSS 248
V+ +ETWRG+ D+ VAAYRV + L + L I PA+ETW ALE GS
Sbjct 177 PVS--GKETWRGVAD-DAGVVAAYRVKVDDRLDEVLAEIGHLPAEETWTALEF---TGSP 230
Query 249 TRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDG 298
+ A+RT RP AP+AGL P G H PAL AL+P ST RLDG
Sbjct 231 AEPLLTVCAAVRTSDRPAAKAPLAGLTPARGRHRPALAALNPLSTERLDG 280
>gi|120401447|ref|YP_951276.1| putative transmembrane protein [Mycobacterium vanbaalenii PYR-1]
gi|119954265|gb|ABM11270.1| putative conserved transmembrane protein [Mycobacterium vanbaalenii
PYR-1]
Length=295
Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 136/299 (46%), Positives = 179/299 (60%), Gaps = 9/299 (3%)
Query 12 RVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIARRGLAILRRR 71
R+TL L V+P + YPWQ+ LLGVA AVV+ LF WRG + T I R AIL RR
Sbjct 4 RLTLAALFVIPAVMTYPWQTVAQRWLLGVAIAVVVVLFASWRGRFVTAIFGRRTAILLRR 63
Query 72 RRIAEPA-TCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRITSRVTASGDC 130
RI + A + TV + + P + LPL+L+A YLDRYGI D +R+TSR+ G
Sbjct 64 GRIRDAAPSGEYATVALRLEP--REAAELPLSLVAGYLDRYGISFDKVRVTSRIAGPGAA 121
Query 131 RTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGTAAPDEIPALV 190
TWV LT+ A DN+AAL ARS IPL++TA++A RRLAD LRE GWE + D +
Sbjct 122 ATWVALTLGAADNIAALSARSPAIPLRDTAELAGRRLADQLREAGWE--VSVDDTAAGPL 179
Query 191 AADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALEIAYAAGSSTR 250
+ +++E WRG+ ++AAYR++A+ L A+R+ A E W A+E G T+
Sbjct 180 SGEAKERWRGV-EDGRGFLAAYRIAADEPLDGLFSAVRALDADEIWTAVEF---TGDRTQ 235
Query 251 YTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHTDAPADLLTR 309
AAACALRT RPG A + GL PQHG H AL A+ P S +RL G T +L+R
Sbjct 236 PEFAAACALRTAQRPGVRASLPGLTPQHGRHAAALAAMAPGSDQRLPGPTGLMPPVLSR 294
>gi|145220923|ref|YP_001131601.1| hypothetical protein Mflv_0319 [Mycobacterium gilvum PYR-GCK]
gi|315442107|ref|YP_004074986.1| hypothetical protein Mspyr1_04390 [Mycobacterium sp. Spyr1]
gi|145213409|gb|ABP42813.1| putative conserved transmembrane protein [Mycobacterium gilvum
PYR-GCK]
gi|315260410|gb|ADT97151.1| hypothetical protein Mspyr1_04390 [Mycobacterium sp. Spyr1]
Length=301
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 139/287 (49%), Positives = 174/287 (61%), Gaps = 17/287 (5%)
Query 12 RVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIARRGLAILRRR 71
R+TL L V+P A+AYPWQ+T D LLGVA AVV+ LF +WRGL+ TT+ R + +L RR
Sbjct 4 RLTLAALFVIPAAMAYPWQTTFDRWLLGVAVAVVVILFAWWRGLFVTTLVARRIRLLTRR 63
Query 72 RRIAEPATCTR-TTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRITSRVTASGDC 130
R A+ TV + V +D LPL L A +LDRYGI D +R+TSR A+G
Sbjct 64 GRSADDGDAGEFATVALRVEQGQAD---LPLALAADHLDRYGIAFDKVRVTSR-EAAGHR 119
Query 131 RTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEAGTAAPDEIPALV 190
TWV LT+ A N+AAL ARS +IPLQ+T +VAARRLADHLRE GWE D+ P +
Sbjct 120 TTWVSLTLGAASNIAALTARSPQIPLQDTVEVAARRLADHLRERGWEVTI---DDAPGPL 176
Query 191 AAD-SRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALEIAYAAGSST 249
D +ETWRG+ ++AAYRV + L +TL A S E W A+E GS T
Sbjct 177 PGDGGKETWRGVVDGHG-HLAAYRVRVDERLTETLAAAGS-AGTEFWSAVEF---TGSRT 231
Query 250 RYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRL 296
+AA+CALRT RP +AGL + G H AL AL P S RRL
Sbjct 232 SPEIAASCALRTTDRP---PAIAGLTAERGLHRSALDALGPTSHRRL 275
>gi|169629310|ref|YP_001702959.1| hypothetical protein MAB_2224c [Mycobacterium abscessus ATCC
19977]
gi|169241277|emb|CAM62305.1| Conserved hypothetical membrane protein [Mycobacterium abscessus]
Length=317
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 120/301 (40%), Positives = 165/301 (55%), Gaps = 18/301 (5%)
Query 8 PGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIARRGLAI 67
PG R+TL+ V A A + D + A + + L +WRG + T I R +
Sbjct 2 PGTLRLTLIATLVAAGAFALYRRDPADRWIAITAGVLALVLLVWWRGTFLTDILGRLTKM 61
Query 68 LRRR---------RRIAEPATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTI 118
L RR + R+TV++ + S +V P+ L+A YLDRYG+R +I
Sbjct 62 LARRVSGRAPADAAPVVAVGVDARSTVVLELTASPSGEDV-PVGLLAGYLDRYGVRCSSI 120
Query 119 RITSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGWEA 178
RIT+ RTWV LT+ A DNL ALQARSARIPL+ETA ARRLADHLRE+GW
Sbjct 121 RITTTDVDGAASRTWVSLTLSAADNLTALQARSARIPLRETADTVARRLADHLRELGWHV 180
Query 179 -GTAAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWI 237
T AP+E ++ +++E RGM D Y+AAYRV+ N +L +TL + E W
Sbjct 181 TATEAPEEP---LSPEAKEGSRGMSD-DHGYLAAYRVAVNNDLSETLDNVGDAGLPERWT 236
Query 238 ALEIAYAAGSSTRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLD 297
ALE+ G++ + CALRT +P AP+AGL P G H+ L +L+P S++ L
Sbjct 237 ALEL---TGTTDAPRLTVVCALRTQDKPAAHAPLAGLTPCWGEHLLVLRSLNPLSSKTLA 293
Query 298 G 298
G
Sbjct 294 G 294
>gi|317506277|ref|ZP_07964092.1| hypothetical protein HMPREF9336_00461 [Segniliparus rugosus ATCC
BAA-974]
gi|316255414|gb|EFV14669.1| hypothetical protein HMPREF9336_00461 [Segniliparus rugosus ATCC
BAA-974]
Length=310
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/313 (40%), Positives = 155/313 (50%), Gaps = 32/313 (10%)
Query 1 MNPIPSWPGRGRVTLVLLAVVPVALAYP------WQSTRDYVLLGVAAAVVIGLFGFWRG 54
M+ P+ P R R TL L V L W+ + + L VA + + L W G
Sbjct 1 MSIAPAKPSRARATLALALVFAAVLVGADSLRTGWRPSAGWFLGAVAVLLALVLGS-WGG 59
Query 55 LYFTTIARRGLAILRRRRRIA----------EPATCTRTTVLVWVGPPA--SDTNVLPLT 102
+ T I RR +A+ R +R E + +R V V V PPA N LPL
Sbjct 60 THVTQILRRRIALSSRAKRGVSAEAEGSAKPEAGSSSRVAVFVRVEPPAGAESRNWLPLE 119
Query 103 LIARYLDRYGIRADTIRITSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQV 162
LIA YLDRYG+R +R+ R + W+ L V A +NLAAL+ARSARIPL E A+
Sbjct 120 LIASYLDRYGVRCAAVRVAFRRSRRYGQEAWITLVVDATENLAALEARSARIPLHELAEA 179
Query 163 AARRLADHLREIGWEAGTAAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSANAELPD 222
RRLA LRE G+ A A D P LV A S E W G+ + + VAAY VS +L
Sbjct 180 TRRRLAAQLREEGFAAEHA--DTAPKLVWAGS-EDWNGVVDGE-ERVAAYAVSTGGDLDA 235
Query 223 TLPAIRSRPAQETWIALEIAYAAGSSTRYTVAAACALRTDWRPGGTAPV--AGLLPQHGN 280
L I + PAQETW LE GS T+ ACALR G + AGL P G
Sbjct 236 RLAEIAAYPAQETWTVLEF---TGSPASATLTVACALRKQ----GVVELLPAGLQPHRGA 288
Query 281 HVPALTALDPRST 293
H+PAL L P ST
Sbjct 289 HLPALAILAPDST 301
>gi|317506402|ref|ZP_07964208.1| subtilase [Segniliparus rugosus ATCC BAA-974]
gi|316255302|gb|EFV14566.1| subtilase [Segniliparus rugosus ATCC BAA-974]
Length=636
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/226 (43%), Positives = 123/226 (55%), Gaps = 12/226 (5%)
Query 5 PSWPGRGRVTLVLLAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIARRG 64
P PG R+ LV VV A + A + + L +WRGL+ T I +
Sbjct 413 PPAPGTFRLALVSTLVVAAVFALCRRDLTGRWAAASAGTLALALSIWWRGLFATDIVGKR 472
Query 65 LAILRRR-RRIA--EPATCTR------TTVLVWVGPPASDTNVLPLTLIARYLDRYGIRA 115
L +L RR R A EPA R +TV + + PPAS V P+ L+A YLDRYG+
Sbjct 473 LRMLSRRFSRSAPEEPAEIVRAGAGALSTVALELVPPASGGEV-PVELLAGYLDRYGVSC 531
Query 116 DTIRITSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIG 175
+IRIT D W LT+ A DNLAAL RS RIPL+ETA+ A RRLADHLRE+G
Sbjct 532 SSIRITLADKGGSDGCVWASLTLSAADNLAALAGRSPRIPLRETAETARRRLADHLRELG 591
Query 176 WEAGTAAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSANAELP 221
W+A A + P A ++E WR + + Y+AAYRV ANA LP
Sbjct 592 WQARAAERPDGPDF-APGAKEGWRAV-ADERGYLAAYRVRANAALP 635
>gi|296393177|ref|YP_003658061.1| hypothetical protein Srot_0750 [Segniliparus rotundus DSM 44985]
gi|296180324|gb|ADG97230.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985]
Length=321
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 107/314 (35%), Positives = 145/314 (47%), Gaps = 43/314 (13%)
Query 1 MNPIPSWPGRGRVTLVLLAVVPVALA-YPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTT 59
M+ P+ P R R TLVL V + PW+ + +GVAAA+V + W G + +T
Sbjct 1 MSIAPARPSRARATLVLALVFAAGFSSVPWRPASGW-FVGVAAAIVFLVLASWGGAHIST 59
Query 60 IARRGLAILRRRRRIAE------------PATCTRTTVLVWVGPPASDTNVLPLTLIARY 107
I RR A+ R+R + + A + V A + LPL+LIA Y
Sbjct 60 ILRRRFALSSRKRLVKQGDADAAAKDQQRAAARATALIRVAAPAGAGPADWLPLSLIAGY 119
Query 108 LDRYGIRADTIRITSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRL 167
LDRYG+R +R+ R + W+ L V A NL AL+ARS RI L E A+ RRL
Sbjct 120 LDRYGVRCAAVRVAFRRVGD-EQEAWITLVVDAVQNLVALRARSPRIQLHELAEATGRRL 178
Query 168 ADHLREIGWEA------------------GTAAPDEIPALVAADSRETWRGMRHTDSDYV 209
A LRE G+ + G+ AP I L A D E W G+ + V
Sbjct 179 AAQLREEGFSSSSGRDPQAEHADDAQHREGSPAPSPIDGLRADDGAEDWNGV-VVGEERV 237
Query 210 AAYRVSANAELPDTLPAIRSRPAQETWIALEIAYAAGSSTRYTVAAACALRTDWRPGGTA 269
+AY V+A +L L I + PA+ETW LE G + ACALR G
Sbjct 238 SAYAVAAKGDLGAVLAEIAAYPARETWTVLEF---TGEPADPDLVVACALRKK----GVV 290
Query 270 PV--AGLLPQHGNH 281
+ AGL P+ G+H
Sbjct 291 ELLPAGLQPRRGDH 304
>gi|108802522|ref|YP_642718.1| hypothetical protein Mmcs_5562 [Mycobacterium sp. MCS]
gi|119855351|ref|YP_935954.1| hypothetical protein Mkms_5965 [Mycobacterium sp. KMS]
gi|108772941|gb|ABG11662.1| hypothetical protein Mmcs_5562 [Mycobacterium sp. MCS]
gi|119698068|gb|ABL95139.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=519
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/276 (28%), Positives = 111/276 (41%), Gaps = 79/276 (28%)
Query 40 VAAAVVIGLFGFWRGLYFTTIARR--GLAILRRRRRI----------------AEPATCT 81
VAAA+++ G W G + +T RR +A RR+R + P T
Sbjct 25 VAAALILAFLGSWHGQHVSTTVRRWAPMAWHNRRQRSLRARGPQPRRRRPSDQSAPGEQT 84
Query 82 RTT----------VLVWVGP-------PASDTNVLPLTLIARYLDRYGIRADTIRIT--S 122
T +++ + P P + LP I +L+RYG+RAD + IT +
Sbjct 85 DTAPADSSALEARIVIHLRPHPHTLSTPEDTDDQLPWRFITGWLNRYGVRADVLTITAVT 144
Query 123 RVTASGDCRT----------------WVGLTVVADDNLAALQARS--------------- 151
R A RT W+ T+ A+ N+ AL AR
Sbjct 145 RTPAPSGLRTDSAALLSGRMPQHRDTWLTYTLRAESNVGALTARRTTMGNPAGGASVEDP 204
Query 152 ---ARIPLQETAQVAARRLADHLREIGWEAGTAAPDEIPALV---AADSRETWRGMRHTD 205
AR L +T RRL LRE GW A + DE+P V A + RETW G H+D
Sbjct 205 NAPARAALADTT---GRRLIAELRERGWLATISEADELPEFVPAAATERRETWTGTEHSD 261
Query 206 SDYVAAYRVSANAELPDTLPAIRSRPAQETWIALEI 241
+ A Y V + L L + + A+ TW+ + I
Sbjct 262 G-FRAVYAVDPGS-LSGVLNELPNMGAKTTWVIVTI 295
>gi|317506404|ref|ZP_07964209.1| homeobox protein MSH-B [Segniliparus rugosus ATCC BAA-974]
gi|316255284|gb|EFV14549.1| homeobox protein MSH-B [Segniliparus rugosus ATCC BAA-974]
Length=66
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/61 (43%), Positives = 35/61 (58%), Gaps = 1/61 (1%)
Query 253 VAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGHT-DAPADLLTRLH 311
+A CALRT +P AP+AGL P G H+P L AL P+ +L G + + A+LL L
Sbjct 4 LAVVCALRTGDKPAPRAPLAGLEPCSGEHLPVLRALRPQVADQLGGESAEVTAELLGELS 63
Query 312 W 312
Sbjct 64 L 64
>gi|333976352|gb|EGL77221.1| Hep/Hag repeat protein [Veillonella parvula ACS-068-V-Sch12]
Length=3358
Score = 39.3 bits (90), Expect = 0.95, Method: Composition-based stats.
Identities = 41/155 (27%), Positives = 62/155 (40%), Gaps = 14/155 (9%)
Query 108 LDRYGIRAD-------TIRITSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETA 160
L G+R D T ++ S+VT +GD +T DD L+ + L T+
Sbjct 1623 LTNKGLRFDADNNAEKTNKLGSKVTVNGDDNITTEITQTGDDTKIGLKLKK---DLNVTS 1679
Query 161 QVAARRLADHLREIGWEAGTAAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSANAEL 220
A + +G +A A P V +TW T + R + +L
Sbjct 1680 VTATETVKAGTVTMGKQADGATPANTGNYVTGLDNKTWSVTNPT----AVSGRAATEDQL 1735
Query 221 PDTLPAIRSRPAQETWIALEIAYAAGSSTRYTVAA 255
AI+++ A T +L AAGS+ YTVAA
Sbjct 1736 KTVTEAIKTQGANATDFSLVANPAAGSNGDYTVAA 1770
>gi|294792353|ref|ZP_06757500.1| hemagglutinin superfamily [Veillonella sp. 6_1_27]
gi|294456252|gb|EFG24615.1| hemagglutinin superfamily [Veillonella sp. 6_1_27]
Length=3443
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 35/139 (26%), Positives = 60/139 (44%), Gaps = 7/139 (5%)
Query 117 TIRITSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGW 176
T ++ S+VT +GD +T +DD L+ + L T+ AA + +G
Sbjct 1711 TNKLGSKVTVNGDDNITTEITQTSDDTKIGLKLKKN---LNVTSVTAAETVKAGTITMGK 1767
Query 177 EAGTAAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETW 236
++ A+P + V + W D+ + R + +L AI+++ A T
Sbjct 1768 QSDGASPANMGNYVTGLDNKAWS----IDNPTFVSGRAATEDQLKTVTEAIKTQGANATD 1823
Query 237 IALEIAYAAGSSTRYTVAA 255
+L AAGS+ YTV A
Sbjct 1824 FSLVANPAAGSNGDYTVDA 1842
>gi|339500649|ref|YP_004698684.1| hypothetical protein Spica_2049 [Spirochaeta caldaria DSM 7334]
gi|338834998|gb|AEJ20176.1| hypothetical protein Spica_2049 [Spirochaeta caldaria DSM 7334]
Length=646
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/92 (33%), Positives = 44/92 (48%), Gaps = 4/92 (4%)
Query 145 AALQARSARIPLQETAQVAARRLADH-LREIGWEAGTAAPDEIPALVAADSRETWRGMRH 203
AL+ARS+ IP T L DH R I EA +++ +L+ R T R ++H
Sbjct 543 VALKARSSLIPEGHTLDSYMDELRDHWNRLINVEAKNNLTEDVNSLIRDYLRRTIRSLKH 602
Query 204 TDSDYVAAYRVSANAELPDTLPAIRSRPAQET 235
+ A R+S AE P ++ PAQE+
Sbjct 603 A---HFTADRISNLAEALVNTPNLQKLPAQES 631
>gi|282848721|ref|ZP_06258116.1| Hep/Hag repeat protein [Veillonella parvula ATCC 17745]
gi|282581507|gb|EFB86895.1| Hep/Hag repeat protein [Veillonella parvula ATCC 17745]
Length=3412
Score = 37.0 bits (84), Expect = 5.0, Method: Composition-based stats.
Identities = 34/139 (25%), Positives = 59/139 (43%), Gaps = 7/139 (5%)
Query 117 TIRITSRVTASGDCRTWVGLTVVADDNLAALQARSARIPLQETAQVAARRLADHLREIGW 176
T ++ S+VT +GD +T +DD L+ + L T+ AA + +G
Sbjct 1659 TNKLGSKVTVNGDDNITTEITQTSDDTKIGLKLKKN---LNVTSVTAAETVKAGTITMGK 1715
Query 177 EAGTAAPDEIPALVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETW 236
++ A+P + V + W D+ + R + +L AI+++ A T
Sbjct 1716 QSDGASPANMGNYVTGLDNKAWS----IDNPTFVSGRAATEDQLKTVTEAIKTQGASATD 1771
Query 237 IALEIAYAAGSSTRYTVAA 255
+L AGS+ YTV A
Sbjct 1772 FSLVANPTAGSNGDYTVDA 1790
>gi|309792337|ref|ZP_07686807.1| hypothetical protein OSCT_2758 [Oscillochloris trichoides DG6]
gi|308225652|gb|EFO79410.1| hypothetical protein OSCT_2758 [Oscillochloris trichoides DG6]
Length=663
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/139 (29%), Positives = 57/139 (42%), Gaps = 25/139 (17%)
Query 18 LAVVPVALAYPWQSTRDYVLLGVAAAVVIGLFGFWRGLYFTTIARRGLAILRRRRRIAEP 77
+A +PV S RD+V LG+ A+ + + GL + I+ RG A +RRIAE
Sbjct 340 IASLPVFYLLLVMSLRDHVRLGLGIALAVAML----GLNWAAISARGDARNDLQRRIAEA 395
Query 78 ATCTRTTVLVWVGPPASDTNVLPLTLIARYLDRYGIRADTIRITSRVTASGDCRTWVGLT 137
A D V+P L+ YL Y R + +T + SG
Sbjct 396 LAAQSG---------AGDLLVVPDGLLELYLPYYAQRENLTGLTQAMNQSG--------- 437
Query 138 VVADDNLAALQARSARIPL 156
D +AA Q AR+ L
Sbjct 438 ---GDWVAACQRLQARVEL 453
>gi|210075767|ref|XP_502984.2| YALI0D18403p [Yarrowia lipolytica]
gi|223590243|sp|Q6C8M8.3|ATG26_YARLI RecName: Full=Sterol 3-beta-glucosyltransferase; AltName: Full=Autophagy-related
protein 26
gi|199425822|emb|CAG81176.2| YALI0D18403p [Yarrowia lipolytica]
Length=1456
Score = 36.2 bits (82), Expect = 6.9, Method: Composition-based stats.
Identities = 31/125 (25%), Positives = 54/125 (44%), Gaps = 3/125 (2%)
Query 183 PDEIPALVAADSRETWRGMRHTDSDYVAAYRVSANAELPDTLPAIRSRPAQETWIALEIA 242
P +P+ + + + +D +A+ R S++ P P S+P A +
Sbjct 530 PTLVPSFLKSRASSRRNSAEGSDRPNLASQRTSSSTLFPSAPPTPGSQPTTPGVHAPGSS 589
Query 243 YAAGS---STRYTVAAACALRTDWRPGGTAPVAGLLPQHGNHVPALTALDPRSTRRLDGH 299
GS +T T A+A ++ PG APV + +GN +PA A + + R+ G
Sbjct 590 TPGGSYGTTTPGTPASADSVSLAGTPGVAAPVGDIEGLNGNPMPAGIAAELKEKRKSGGA 649
Query 300 TDAPA 304
T + A
Sbjct 650 TSSGA 654
Lambda K H
0.321 0.134 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 589755449788
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40