BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0297 Length=591 Score E Sequences producing significant alignments: (Bits) Value gi|57116718|ref|YP_177713.1| PE-PGRS family protein [Mycobacteri... 976 0.0 gi|148821495|ref|YP_001286249.1| PE-PGRS family protein [Mycobac... 972 0.0 gi|15839683|ref|NP_334720.1| PE_PGRS family protein [Mycobacteri... 971 0.0 gi|339297002|gb|AEJ49112.1| hypothetical protein CCDC5180_0275 [... 969 0.0 gi|289445835|ref|ZP_06435579.1| PE-PGRS family protein [Mycobact... 156 1e-35 gi|340625335|ref|YP_004743787.1| PE-PGRS family protein [Mycobac... 153 8e-35 gi|344218118|gb|AEM98748.1| PE-PGRS family protein [Mycobacteriu... 153 8e-35 gi|328457012|gb|AEB02435.1| hypothetical protein TBSG_00306 [Myc... 153 8e-35 gi|31791476|ref|NP_853969.1| PE-PGRS family protein [Mycobacteri... 153 8e-35 gi|253797224|ref|YP_003030225.1| hypothetical protein TBMG_00302... 153 9e-35 gi|339630372|ref|YP_004722014.1| PE-PGRS family protein [Mycobac... 153 1e-34 gi|183984120|ref|YP_001852411.1| PE-PGRS family protein [Mycobac... 141 3e-31 gi|148662694|ref|YP_001284217.1| PE-PGRS family protein [Mycobac... 141 4e-31 gi|57117029|ref|YP_177909.1| PE-PGRS family protein [Mycobacteri... 140 4e-31 gi|339632862|ref|YP_004724504.1| PE-PGRS family protein [Mycobac... 140 5e-31 gi|297635466|ref|ZP_06953246.1| PE-PGRS family protein [Mycobact... 140 6e-31 gi|31794030|ref|NP_856523.1| PE-PGRS family protein [Mycobacteri... 140 6e-31 gi|121638733|ref|YP_978957.1| PE-PGRS family protein [Mycobacter... 140 7e-31 gi|148824043|ref|YP_001288797.1| PE-PGRS family protein [Mycobac... 140 9e-31 gi|340627846|ref|YP_004746298.1| PE-PGRS family protein [Mycobac... 139 1e-30 gi|15842394|ref|NP_337431.1| PE_PGRS family protein [Mycobacteri... 138 2e-30 gi|31792060|ref|NP_854553.1| PE-PGRS family protein [Mycobacteri... 135 2e-29 gi|15840285|ref|NP_335322.1| PE_PGRS family protein [Mycobacteri... 135 2e-29 gi|57116793|ref|YP_177763.1| PE-PGRS family protein [Mycobacteri... 135 2e-29 gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobac... 135 3e-29 gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted p... 135 3e-29 gi|339297525|gb|AEJ49635.1| PE-PGRS family protein [Mycobacteriu... 132 1e-28 gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobac... 132 2e-28 gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobac... 129 1e-27 gi|294994057|ref|ZP_06799748.1| PE_PGRS family protein [Mycobact... 128 3e-27 gi|183982507|ref|YP_001850798.1| PE-PGRS family protein, PE_PGRS... 127 4e-27 gi|183985307|ref|YP_001853598.1| PE-PGRS family protein [Mycobac... 126 1e-26 gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobac... 125 2e-26 gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobact... 124 6e-26 gi|183985330|ref|YP_001853621.1| PE-PGRS family protein [Mycobac... 124 7e-26 gi|148822671|ref|YP_001287425.1| PE-PGRS family protein [Mycobac... 123 1e-25 gi|339294428|gb|AEJ46539.1| hypothetical protein CCDC5079_1349 [... 123 1e-25 gi|183985103|ref|YP_001853394.1| PE-PGRS family protein, PE_PGRS... 122 1e-25 gi|57116866|ref|YP_177813.1| PE-PGRS family protein [Mycobacteri... 122 1e-25 gi|339298066|gb|AEJ50176.1| hypothetical protein CCDC5180_1339 [... 122 2e-25 gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobac... 122 2e-25 gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobact... 122 2e-25 gi|31792646|ref|NP_855139.1| PE-PGRS family protein [Mycobacteri... 121 4e-25 gi|224989857|ref|YP_002644544.1| PE-PGRS family protein [Mycobac... 120 5e-25 gi|339631132|ref|YP_004722774.1| PE-PGRS family protein [Mycobac... 120 6e-25 gi|121637382|ref|YP_977605.1| PE-PGRS family protein [Mycobacter... 120 6e-25 gi|121636496|ref|YP_976719.1| PE-PGRS family protein [Mycobacter... 120 9e-25 gi|340626079|ref|YP_004744531.1| PE-PGRS family protein [Mycobac... 120 9e-25 gi|254549533|ref|ZP_05139980.1| PE-PGRS family protein [Mycobact... 120 9e-25 gi|148660347|ref|YP_001281870.1| PE-PGRS family protein [Mycobac... 120 1e-24 >gi|57116718|ref|YP_177713.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148660063|ref|YP_001281586.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|7476121|pir||B70523 hypothetical glycine-rich protein Rv0297 - Mycobacterium tuberculosis (strain H37RV) gi|38490169|emb|CAE55268.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148504215|gb|ABQ72024.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|339293355|gb|AEJ45466.1| hypothetical protein CCDC5079_0276 [Mycobacterium tuberculosis CCDC5079] Length=591 Score = 976 bits (2522), Expect = 0.0, Method: Compositional matrix adjust. Identities = 590/591 (99%), Positives = 591/591 (100%), Gaps = 0/591 (0%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +SFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ Sbjct 1 MSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA Sbjct 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 Query 121 NGAPGTGQAGGDGGLLFGNGGNGGSGAPGQAGGAGGAAGFFGNGGNGGDGGAGANGGAGG 180 NGAPGTGQAGGDGGLLFGNGGNGGSGAPGQAGGAGGAAGFFGNGGNGGDGGAGANGGAGG Sbjct 121 NGAPGTGQAGGDGGLLFGNGGNGGSGAPGQAGGAGGAAGFFGNGGNGGDGGAGANGGAGG 180 Query 181 TAGWFFGFGGNGGAGGIGVAGINGGLGGAGGDGGNAGFFGNGGNGGMGGAGAAGVNAVNP 240 TAGWFFGFGGNGGAGGIGVAGINGGLGGAGGDGGNAGFFGNGGNGGMGGAGAAGVNAVNP Sbjct 181 TAGWFFGFGGNGGAGGIGVAGINGGLGGAGGDGGNAGFFGNGGNGGMGGAGAAGVNAVNP 240 Query 241 GLATPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAGGAGGDGGNASTSGGIGIAQ 300 GLATPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAGGAGGDGGNASTSGGIGIAQ Sbjct 241 GLATPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAGGAGGDGGNASTSGGIGIAQ 300 Query 301 TGGAGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGNGATGGNGGVGAPGGAGGNGG 360 TGGAGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGNGATGGNGGVGAPGGAGGNGG Sbjct 301 TGGAGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGNGATGGNGGVGAPGGAGGNGG 360 Query 361 HVSGGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPVGDSGNGGAGGDGGAGVSATDI 420 HVSGGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPVGDSGNGGAGGDGGAGVSATDI Sbjct 361 HVSGGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPVGDSGNGGAGGDGGAGVSATDI 420 Query 421 AGTGGRGGNGGHGGLWIGNGGDGGAGGVGGVGGAGAAGAIGGHGGDGGSVNTPIGGSEAG 480 AGTGGRGGNGGHGGLWIGNGGDGGAGGVGGVGGAGAAGAIGGHGGDGGSVNTPIGGSEAG Sbjct 421 AGTGGRGGNGGHGGLWIGNGGDGGAGGVGGVGGAGAAGAIGGHGGDGGSVNTPIGGSEAG 480 Query 481 DGGKGGLGGDGGGRGIFGQFGAGGAGGAGGVGGAGGAGGTGGGGGNGGAIFNAGTPGAAG 540 DGGKGGLGGDGGGRGIFGQFGAGGAGGAGGVGGAGGAGGTGGGGGNGGAIFNAGTPGAAG Sbjct 481 DGGKGGLGGDGGGRGIFGQFGAGGAGGAGGVGGAGGAGGTGGGGGNGGAIFNAGTPGAAG 540 Query 541 TGGDGGVGGTGAAGGKGGAGGSGGVNGATGADGAKGLDGATGGKGNNGNPG 591 TGGDGGVGGTGAAGGKGGAGGSGGVNGATGADGAKGLDGATGGKGNNGNPG Sbjct 541 TGGDGGVGGTGAAGGKGGAGGSGGVNGATGADGAKGLDGATGGKGNNGNPG 591 >gi|148821495|ref|YP_001286249.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148720022|gb|ABR04647.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] Length=622 Score = 972 bits (2512), Expect = 0.0, Method: Compositional matrix adjust. Identities = 590/591 (99%), Positives = 590/591 (99%), Gaps = 0/591 (0%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ Sbjct 32 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 91 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 AYQAASAQAAAFHAQVVRTLTVDAGAY SAEAANAGPNMLAAVNAPAQALLGRPLIGNGA Sbjct 92 AYQAASAQAAAFHAQVVRTLTVDAGAYVSAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 151 Query 121 NGAPGTGQAGGDGGLLFGNGGNGGSGAPGQAGGAGGAAGFFGNGGNGGDGGAGANGGAGG 180 NGAPGTGQAGGDGGLLFGNGGNGGSGAPGQAGGAGGAAGFFGNGGNGGDGGAGANGGAGG Sbjct 152 NGAPGTGQAGGDGGLLFGNGGNGGSGAPGQAGGAGGAAGFFGNGGNGGDGGAGANGGAGG 211 Query 181 TAGWFFGFGGNGGAGGIGVAGINGGLGGAGGDGGNAGFFGNGGNGGMGGAGAAGVNAVNP 240 TAGWFFGFGGNGGAGGIGVAGINGGLGGAGGDGGNAGFFGNGGNGGMGGAGAAGVNAVNP Sbjct 212 TAGWFFGFGGNGGAGGIGVAGINGGLGGAGGDGGNAGFFGNGGNGGMGGAGAAGVNAVNP 271 Query 241 GLATPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAGGAGGDGGNASTSGGIGIAQ 300 GLATPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAGGAGGDGGNASTSGGIGIAQ Sbjct 272 GLATPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAGGAGGDGGNASTSGGIGIAQ 331 Query 301 TGGAGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGNGATGGNGGVGAPGGAGGNGG 360 TGGAGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGNGATGGNGGVGAPGGAGGNGG Sbjct 332 TGGAGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGNGATGGNGGVGAPGGAGGNGG 391 Query 361 HVSGGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPVGDSGNGGAGGDGGAGVSATDI 420 HVSGGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPVGDSGNGGAGGDGGAGVSATDI Sbjct 392 HVSGGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPVGDSGNGGAGGDGGAGVSATDI 451 Query 421 AGTGGRGGNGGHGGLWIGNGGDGGAGGVGGVGGAGAAGAIGGHGGDGGSVNTPIGGSEAG 480 AGTGGRGGNGGHGGLWIGNGGDGGAGGVGGVGGAGAAGAIGGHGGDGGSVNTPIGGSEAG Sbjct 452 AGTGGRGGNGGHGGLWIGNGGDGGAGGVGGVGGAGAAGAIGGHGGDGGSVNTPIGGSEAG 511 Query 481 DGGKGGLGGDGGGRGIFGQFGAGGAGGAGGVGGAGGAGGTGGGGGNGGAIFNAGTPGAAG 540 DGGKGGLGGDGGGRGIFGQFGAGGAGGAGGVGGAGGAGGTGGGGGNGGAIFNAGTPGAAG Sbjct 512 DGGKGGLGGDGGGRGIFGQFGAGGAGGAGGVGGAGGAGGTGGGGGNGGAIFNAGTPGAAG 571 Query 541 TGGDGGVGGTGAAGGKGGAGGSGGVNGATGADGAKGLDGATGGKGNNGNPG 591 TGGDGGVGGTGAAGGKGGAGGSGGVNGATGADGAKGLDGATGGKGNNGNPG Sbjct 572 TGGDGGVGGTGAAGGKGGAGGSGGVNGATGADGAKGLDGATGGKGNNGNPG 622 >gi|15839683|ref|NP_334720.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13879805|gb|AAK44534.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=622 Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust. Identities = 589/591 (99%), Positives = 589/591 (99%), Gaps = 0/591 (0%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ Sbjct 32 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 91 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA Sbjct 92 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 151 Query 121 NGAPGTGQAGGDGGLLFGNGGNGGSGAPGQAGGAGGAAGFFGNGGNGGDGGAGANGGAGG 180 NGAPGTGQAGGDGGLLFGNGGNGGSGAPGQAGGAGGA GFFGNGGNGGDGGAGANGGAGG Sbjct 152 NGAPGTGQAGGDGGLLFGNGGNGGSGAPGQAGGAGGATGFFGNGGNGGDGGAGANGGAGG 211 Query 181 TAGWFFGFGGNGGAGGIGVAGINGGLGGAGGDGGNAGFFGNGGNGGMGGAGAAGVNAVNP 240 TAGWFFGFGGNGGAGGIGVAGINGGLGGAGGDGGNAGFFGNGGNGGMGGAGAAGVNAVNP Sbjct 212 TAGWFFGFGGNGGAGGIGVAGINGGLGGAGGDGGNAGFFGNGGNGGMGGAGAAGVNAVNP 271 Query 241 GLATPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAGGAGGDGGNASTSGGIGIAQ 300 GLATPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAGGAGGDGGNASTSGGIGIAQ Sbjct 272 GLATPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAGGAGGDGGNASTSGGIGIAQ 331 Query 301 TGGAGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGNGATGGNGGVGAPGGAGGNGG 360 TGGAGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGNGATGGNGGVGAPGGAGGNGG Sbjct 332 TGGAGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGNGATGGNGGVGAPGGAGGNGG 391 Query 361 HVSGGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPVGDSGNGGAGGDGGAGVSATDI 420 HVSGGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPVGDSGNGGAGGDGGAGVSATDI Sbjct 392 HVSGGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPVGDSGNGGAGGDGGAGVSATDI 451 Query 421 AGTGGRGGNGGHGGLWIGNGGDGGAGGVGGVGGAGAAGAIGGHGGDGGSVNTPIGGSEAG 480 AGTGGRGGNGGHGGLWIGNGGDGG GGVGGVGGAGAAGAIGGHGGDGGSVNTPIGGSEAG Sbjct 452 AGTGGRGGNGGHGGLWIGNGGDGGVGGVGGVGGAGAAGAIGGHGGDGGSVNTPIGGSEAG 511 Query 481 DGGKGGLGGDGGGRGIFGQFGAGGAGGAGGVGGAGGAGGTGGGGGNGGAIFNAGTPGAAG 540 DGGKGGLGGDGGGRGIFGQFGAGGAGGAGGVGGAGGAGGTGGGGGNGGAIFNAGTPGAAG Sbjct 512 DGGKGGLGGDGGGRGIFGQFGAGGAGGAGGVGGAGGAGGTGGGGGNGGAIFNAGTPGAAG 571 Query 541 TGGDGGVGGTGAAGGKGGAGGSGGVNGATGADGAKGLDGATGGKGNNGNPG 591 TGGDGGVGGTGAAGGKGGAGGSGGVNGATGADGAKGLDGATGGKGNNGNPG Sbjct 572 TGGDGGVGGTGAAGGKGGAGGSGGVNGATGADGAKGLDGATGGKGNNGNPG 622 >gi|339297002|gb|AEJ49112.1| hypothetical protein CCDC5180_0275 [Mycobacterium tuberculosis CCDC5180] Length=588 Score = 969 bits (2505), Expect = 0.0, Method: Compositional matrix adjust. Identities = 587/588 (99%), Positives = 588/588 (100%), Gaps = 0/588 (0%) Query 4 VIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQAYQ 63 +IAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQAYQ Sbjct 1 MIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQAYQ 60 Query 64 AASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGANGA 123 AASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGANGA Sbjct 61 AASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGANGA 120 Query 124 PGTGQAGGDGGLLFGNGGNGGSGAPGQAGGAGGAAGFFGNGGNGGDGGAGANGGAGGTAG 183 PGTGQAGGDGGLLFGNGGNGGSGAPGQAGGAGGAAGFFGNGGNGGDGGAGANGGAGGTAG Sbjct 121 PGTGQAGGDGGLLFGNGGNGGSGAPGQAGGAGGAAGFFGNGGNGGDGGAGANGGAGGTAG 180 Query 184 WFFGFGGNGGAGGIGVAGINGGLGGAGGDGGNAGFFGNGGNGGMGGAGAAGVNAVNPGLA 243 WFFGFGGNGGAGGIGVAGINGGLGGAGGDGGNAGFFGNGGNGGMGGAGAAGVNAVNPGLA Sbjct 181 WFFGFGGNGGAGGIGVAGINGGLGGAGGDGGNAGFFGNGGNGGMGGAGAAGVNAVNPGLA 240 Query 244 TPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAGGAGGDGGNASTSGGIGIAQTGG 303 TPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAGGAGGDGGNASTSGGIGIAQTGG Sbjct 241 TPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAGGAGGDGGNASTSGGIGIAQTGG 300 Query 304 AGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGNGATGGNGGVGAPGGAGGNGGHVS 363 AGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGNGATGGNGGVGAPGGAGGNGGHVS Sbjct 301 AGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGNGATGGNGGVGAPGGAGGNGGHVS 360 Query 364 GGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPVGDSGNGGAGGDGGAGVSATDIAGT 423 GGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPVGDSGNGGAGGDGGAGVSATDIAGT Sbjct 361 GGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPVGDSGNGGAGGDGGAGVSATDIAGT 420 Query 424 GGRGGNGGHGGLWIGNGGDGGAGGVGGVGGAGAAGAIGGHGGDGGSVNTPIGGSEAGDGG 483 GGRGGNGGHGGLWIGNGGDGGAGGVGGVGGAGAAGAIGGHGGDGGSVNTPIGGSEAGDGG Sbjct 421 GGRGGNGGHGGLWIGNGGDGGAGGVGGVGGAGAAGAIGGHGGDGGSVNTPIGGSEAGDGG 480 Query 484 KGGLGGDGGGRGIFGQFGAGGAGGAGGVGGAGGAGGTGGGGGNGGAIFNAGTPGAAGTGG 543 KGGLGGDGGGRGIFGQFGAGGAGGAGGVGGAGGAGGTGGGGGNGGAIFNAGTPGAAGTGG Sbjct 481 KGGLGGDGGGRGIFGQFGAGGAGGAGGVGGAGGAGGTGGGGGNGGAIFNAGTPGAAGTGG 540 Query 544 DGGVGGTGAAGGKGGAGGSGGVNGATGADGAKGLDGATGGKGNNGNPG 591 DGGVGGTGAAGGKGGAGGSGGVNGATGADGAKGLDGATGGKGNNGNPG Sbjct 541 DGGVGGTGAAGGKGGAGGSGGVNGATGADGAKGLDGATGGKGNNGNPG 588 >gi|289445835|ref|ZP_06435579.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A] gi|289418793|gb|EFD15994.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A] Length=521 Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 124/124 (100%), Positives = 124/124 (100%), Gaps = 0/124 (0%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ Sbjct 67 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 126 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA Sbjct 127 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 186 Query 121 NGAP 124 NGAP Sbjct 187 NGAP 190 Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 244/244 (100%), Positives = 244/244 (100%), Gaps = 0/244 (0%) Query 235 VNAVNPGLATPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAGGAGGDGGNASTSG 294 VNAVNPGLATPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAGGAGGDGGNASTSG Sbjct 243 VNAVNPGLATPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAGGAGGDGGNASTSG 302 Query 295 GIGIAQTGGAGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGNGATGGNGGVGAPGG 354 GIGIAQTGGAGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGNGATGGNGGVGAPGG Sbjct 303 GIGIAQTGGAGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGNGATGGNGGVGAPGG 362 Query 355 AGGNGGHVSGGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPVGDSGNGGAGGDGGAG 414 AGGNGGHVSGGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPVGDSGNGGAGGDGGAG Sbjct 363 AGGNGGHVSGGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPVGDSGNGGAGGDGGAG 422 Query 415 VSATDIAGTGGRGGNGGHGGLWIGNGGDGGAGGVGGVGGAGAAGAIGGHGGDGGSVNTPI 474 VSATDIAGTGGRGGNGGHGGLWIGNGGDGGAGGVGGVGGAGAAGAIGGHGGDGGSVNTPI Sbjct 423 VSATDIAGTGGRGGNGGHGGLWIGNGGDGGAGGVGGVGGAGAAGAIGGHGGDGGSVNTPI 482 Query 475 GGSE 478 GGSE Sbjct 483 GGSE 486 >gi|340625335|ref|YP_004743787.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340003525|emb|CCC42646.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=593 Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 123/124 (99%), Positives = 124/124 (100%), Gaps = 0/124 (0%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +SFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ Sbjct 1 MSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA Sbjct 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 Query 121 NGAP 124 NGAP Sbjct 121 NGAP 124 >gi|344218118|gb|AEM98748.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=509 Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 123/124 (99%), Positives = 124/124 (100%), Gaps = 0/124 (0%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +SFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ Sbjct 1 MSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA Sbjct 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 Query 121 NGAP 124 NGAP Sbjct 121 NGAP 124 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 339/339 (100%), Positives = 339/339 (100%), Gaps = 0/339 (0%) Query 240 PGLATPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAGGAGGDGGNASTSGGIGIA 299 PGLATPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAGGAGGDGGNASTSGGIGIA Sbjct 158 PGLATPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAGGAGGDGGNASTSGGIGIA 217 Query 300 QTGGAGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGNGATGGNGGVGAPGGAGGNG 359 QTGGAGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGNGATGGNGGVGAPGGAGGNG Sbjct 218 QTGGAGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGNGATGGNGGVGAPGGAGGNG 277 Query 360 GHVSGGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPVGDSGNGGAGGDGGAGVSATD 419 GHVSGGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPVGDSGNGGAGGDGGAGVSATD Sbjct 278 GHVSGGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPVGDSGNGGAGGDGGAGVSATD 337 Query 420 IAGTGGRGGNGGHGGLWIGNGGDGGAGGVGGVGGAGAAGAIGGHGGDGGSVNTPIGGSEA 479 IAGTGGRGGNGGHGGLWIGNGGDGGAGGVGGVGGAGAAGAIGGHGGDGGSVNTPIGGSEA Sbjct 338 IAGTGGRGGNGGHGGLWIGNGGDGGAGGVGGVGGAGAAGAIGGHGGDGGSVNTPIGGSEA 397 Query 480 GDGGKGGLGGDGGGRGIFGQFGAGGAGGAGGVGGAGGAGGTGGGGGNGGAIFNAGTPGAA 539 GDGGKGGLGGDGGGRGIFGQFGAGGAGGAGGVGGAGGAGGTGGGGGNGGAIFNAGTPGAA Sbjct 398 GDGGKGGLGGDGGGRGIFGQFGAGGAGGAGGVGGAGGAGGTGGGGGNGGAIFNAGTPGAA 457 Query 540 GTGGDGGVGGTGAAGGKGGAGGSGGVNGATGADGAKGLD 578 GTGGDGGVGGTGAAGGKGGAGGSGGVNGATGADGAKGLD Sbjct 458 GTGGDGGVGGTGAAGGKGGAGGSGGVNGATGADGAKGLD 496 >gi|328457012|gb|AEB02435.1| hypothetical protein TBSG_00306 [Mycobacterium tuberculosis KZN 4207] Length=588 Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 123/124 (99%), Positives = 124/124 (100%), Gaps = 0/124 (0%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +SFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ Sbjct 1 MSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA Sbjct 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 Query 121 NGAP 124 NGAP Sbjct 121 NGAP 124 >gi|31791476|ref|NP_853969.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|121636212|ref|YP_976435.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988685|ref|YP_002643372.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31617062|emb|CAD93169.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] gi|121491859|emb|CAL70322.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224771798|dbj|BAH24604.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341600228|emb|CCC62898.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=606 Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 123/124 (99%), Positives = 124/124 (100%), Gaps = 0/124 (0%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +SFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ Sbjct 1 MSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA Sbjct 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 Query 121 NGAP 124 NGAP Sbjct 121 NGAP 124 >gi|253797224|ref|YP_003030225.1| hypothetical protein TBMG_00302 [Mycobacterium tuberculosis KZN 1435] gi|253318727|gb|ACT23330.1| predicted protein [Mycobacterium tuberculosis KZN 1435] Length=612 Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 123/124 (99%), Positives = 124/124 (100%), Gaps = 0/124 (0%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +SFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ Sbjct 1 MSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA Sbjct 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 Query 121 NGAP 124 NGAP Sbjct 121 NGAP 124 >gi|339630372|ref|YP_004722014.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339329728|emb|CCC25371.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=588 Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 123/124 (99%), Positives = 124/124 (100%), Gaps = 0/124 (0%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +SFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ Sbjct 1 MSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA Sbjct 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 Query 121 NGAP 124 NGAP Sbjct 121 NGAP 124 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 242/280 (87%), Positives = 242/280 (87%), Gaps = 37/280 (13%) Query 240 PGLATPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAGGAGGDGGNASTSGGIGIA 299 PGLATPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAGGAGGDGGNASTSGGIGIA Sbjct 240 PGLATPVTPAANGGNGLNLVGVPGTAGGGADGANGSAIGQAGGAGGDGGNASTSGGIGIA 299 Query 300 QTGGAGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGNGATGGNGGVGAPGGAGGNG 359 QTGGAGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGNGATGGNGGVGAPGGAGGNG Sbjct 300 QTGGAGGAGGAGGDGAPGGNGGNGGSVEHTGATGSSASGGNGATGGNGGVGAPGGAGGNG 359 Query 360 GHVSGGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPVGDSGNGGAGGDGGAGVSATD 419 GHVSGGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPVGDSGNGGAGGDGGAGVSATD Sbjct 360 GHVSGGSVNTAGAGGKGGNGGTGGAGGPGGHGGSVLSGPVGDSGNGGAGGDGGAGVSATD 419 Query 420 IAGTGGRGGNGGHGGLWIGNGGDGGAGGVGGVGGAGAAGAIGGHGGDGGSVNTPIGGSEA 479 IAGTGGRGGNGGHGGLWIGNGGDGGAGGVGGVGGAGAAGAIGGHGGDGGSVNTPIGGSEA Sbjct 420 IAGTGGRGGNGGHGGLWIGNGGDGGAGGVGGVGGAGAAGAIGGHGGDGGSVNTPIGGSEA 479 Query 480 GDGGKGGLGGDGGGRGIFGQFGAGGAGGAGGVGGAGGAGG 519 G G Sbjct 480 G-------------------------------------DG 482 >gi|183984120|ref|YP_001852411.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183177446|gb|ACC42556.1| PE-PGRS family protein [Mycobacterium marinum M] Length=600 Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 105/158 (67%), Positives = 121/158 (77%), Gaps = 2/158 (1%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +SFV+ PE++A A +LASI SAI+ AN AAAA T G ++A ADEVS AVAA+FS HAQ Sbjct 1 MSFVVVSPEVLAVAGRDLASIGSAISQANVAAAAPTMGALAAGADEVSAAVAAVFSGHAQ 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPN--MLAAVNAPAQALLGRPLIGN 118 AYQA AQ AAFH Q+V L AG YASAE ANA P +L VNAPAQALLGRPLIGN Sbjct 61 AYQALGAQVAAFHDQLVTALDAAAGKYASAEVANASPLQAVLDVVNAPAQALLGRPLIGN 120 Query 119 GANGAPGTGQAGGDGGLLFGNGGNGGSGAPGQAGGAGG 156 G +G GTGQ+GGDGG+L+GNGG+GGSGA GQ GG GG Sbjct 121 GDDGVAGTGQSGGDGGILYGNGGDGGSGASGQIGGTGG 158 >gi|148662694|ref|YP_001284217.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148506846|gb|ABQ74655.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=614 Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 73/123 (60%), Positives = 93/123 (76%), Gaps = 2/123 (1%) Query 3 FVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQAY 62 +V+A P+++ AAA LA I SAI+ AN AAA T V++AAADEVST +AALF +HA++Y Sbjct 2 YVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHARSY 61 Query 63 QAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLA--AVNAPAQALLGRPLIGNGA 120 Q S QAAAFH++ V+ LT A +YAS EAANA P +A +NAPAQ LLGRPLIGNGA Sbjct 62 QTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGNGA 121 Query 121 NGA 123 +G+ Sbjct 122 DGS 124 >gi|57117029|ref|YP_177909.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|7476147|pir||H70589 hypothetical glycine-rich protein Rv2853 - Mycobacterium tuberculosis (strain H37RV) gi|41352758|emb|CAE55525.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|344220685|gb|AEN01316.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=615 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 73/123 (60%), Positives = 93/123 (76%), Gaps = 2/123 (1%) Query 3 FVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQAY 62 +V+A P+++ AAA LA I SAI+ AN AAA T V++AAADEVST +AALF +HA++Y Sbjct 3 YVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHARSY 62 Query 63 QAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLA--AVNAPAQALLGRPLIGNGA 120 Q S QAAAFH++ V+ LT A +YAS EAANA P +A +NAPAQ LLGRPLIGNGA Sbjct 63 QTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGNGA 122 Query 121 NGA 123 +G+ Sbjct 123 DGS 125 >gi|339632862|ref|YP_004724504.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339332218|emb|CCC27928.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=615 Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 73/123 (60%), Positives = 93/123 (76%), Gaps = 2/123 (1%) Query 3 FVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQAY 62 +V+A P+++ AAA LA I SAI+ AN AAA T V++AAADEVST +AALF +HA++Y Sbjct 3 YVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHARSY 62 Query 63 QAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLA--AVNAPAQALLGRPLIGNGA 120 Q S QAAAFH++ V+ LT A +YAS EAANA P +A +NAPAQ LLGRPLIGNGA Sbjct 63 QTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGNGA 122 Query 121 NGA 123 +G+ Sbjct 123 DGS 125 >gi|297635466|ref|ZP_06953246.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] gi|297732465|ref|ZP_06961583.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506] Length=615 Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 73/123 (60%), Positives = 93/123 (76%), Gaps = 2/123 (1%) Query 3 FVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQAY 62 +V+A P+++ AAA LA I SAI+ AN AAA T V++AAADEVST +AALF +HA++Y Sbjct 3 YVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHARSY 62 Query 63 QAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLA--AVNAPAQALLGRPLIGNGA 120 Q S QAAAFH++ V+ LT A +YAS EAANA P +A +NAPAQ LLGRPLIGNGA Sbjct 63 QTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGNGA 122 Query 121 NGA 123 +G+ Sbjct 123 DGS 125 >gi|31794030|ref|NP_856523.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31619624|emb|CAD95063.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=615 Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 73/123 (60%), Positives = 93/123 (76%), Gaps = 2/123 (1%) Query 3 FVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQAY 62 +V+A P+++ AAA LA I SAI+ AN AAA T V++AAADEVST +AALF +HA++Y Sbjct 3 YVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHARSY 62 Query 63 QAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLA--AVNAPAQALLGRPLIGNGA 120 Q S QAAAFH++ V+ LT A +YAS EAANA P +A +NAPAQ LLGRPLIGNGA Sbjct 63 QTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGNGA 122 Query 121 NGA 123 +G+ Sbjct 123 DGS 125 >gi|121638733|ref|YP_978957.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991225|ref|YP_002645914.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121494381|emb|CAL72862.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774340|dbj|BAH27146.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341602771|emb|CCC65449.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=597 Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 73/123 (60%), Positives = 93/123 (76%), Gaps = 2/123 (1%) Query 3 FVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQAY 62 +V+A P+++ AAA LA I SAI+ AN AAA T V++AAADEVST +AALF +HA++Y Sbjct 3 YVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHARSY 62 Query 63 QAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLA--AVNAPAQALLGRPLIGNGA 120 Q S QAAAFH++ V+ LT A +YAS EAANA P +A +NAPAQ LLGRPLIGNGA Sbjct 63 QTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGNGA 122 Query 121 NGA 123 +G+ Sbjct 123 DGS 125 >gi|148824043|ref|YP_001288797.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|253798061|ref|YP_003031062.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|254232947|ref|ZP_04926274.1| PE-PGRS family protein [Mycobacterium tuberculosis C] 6 more sequence titles Length=663 Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 73/123 (60%), Positives = 93/123 (76%), Gaps = 2/123 (1%) Query 3 FVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQAY 62 +V+A P+++ AAA LA I SAI+ AN AAA T V++AAADEVST +AALF +HA++Y Sbjct 51 YVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHARSY 110 Query 63 QAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLA--AVNAPAQALLGRPLIGNGA 120 Q S QAAAFH++ V+ LT A +YAS EAANA P +A +NAPAQ LLGRPLIGNGA Sbjct 111 QTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGNGA 170 Query 121 NGA 123 +G+ Sbjct 171 DGS 173 >gi|340627846|ref|YP_004746298.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340006036|emb|CCC45206.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=615 Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 73/123 (60%), Positives = 93/123 (76%), Gaps = 2/123 (1%) Query 3 FVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQAY 62 +V+A P+++ AAA LA I SAI+ AN AAA T V++AAADEVST +AALF +HA++Y Sbjct 3 YVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHARSY 62 Query 63 QAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLA--AVNAPAQALLGRPLIGNGA 120 Q S QAAAFH++ V+ LT A +YAS EAANA P +A +NAPAQ LLGRPLIGNGA Sbjct 63 QTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGNGA 122 Query 121 NGA 123 +G+ Sbjct 123 DGS 125 >gi|15842394|ref|NP_337431.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13882694|gb|AAK47245.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=663 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 73/123 (60%), Positives = 93/123 (76%), Gaps = 2/123 (1%) Query 3 FVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQAY 62 +V+A P+++ AAA LA I SAI+ AN AAA T V++AAADEVST +AALF +HA++Y Sbjct 51 YVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHARSY 110 Query 63 QAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLA--AVNAPAQALLGRPLIGNGA 120 Q S QAAAFH++ V+ LT A +YAS EAANA P +A +NAPAQ LLGRPLIGNGA Sbjct 111 QTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGNGA 170 Query 121 NGA 123 +G+ Sbjct 171 DGS 173 >gi|31792060|ref|NP_854553.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31617647|emb|CAD93757.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=608 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 81/126 (65%), Positives = 95/126 (76%), Gaps = 2/126 (1%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +S+V+A PEM+AAAA LA I S ++AANAAA A TTGV++A ADEVS AVA+LFS HAQ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGP--NMLAAVNAPAQALLGRPLIGN 118 AYQ QAAAFH + ++ L+ AGAY SAEAANA P L +NAP Q LLGRPLIGN Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 Query 119 GANGAP 124 G NGAP Sbjct 121 GTNGAP 126 >gi|15840285|ref|NP_335322.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|121636795|ref|YP_977018.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148822080|ref|YP_001286834.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] 18 more sequence titles Length=609 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 81/126 (65%), Positives = 95/126 (76%), Gaps = 2/126 (1%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +S+V+A PEM+AAAA LA I S ++AANAAA A TTGV++A ADEVS AVA+LFS HAQ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGP--NMLAAVNAPAQALLGRPLIGN 118 AYQ QAAAFH + ++ L+ AGAY SAEAANA P L +NAP Q LLGRPLIGN Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 Query 119 GANGAP 124 G NGAP Sbjct 121 GTNGAP 126 >gi|57116793|ref|YP_177763.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148660649|ref|YP_001282172.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|7476127|pir||H70816 hypothetical glycine-rich protein Rv0872c - Mycobacterium tuberculosis (strain H37RV) gi|38490245|emb|CAE55332.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148504801|gb|ABQ72610.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=606 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 81/126 (65%), Positives = 95/126 (76%), Gaps = 2/126 (1%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +S+V+A PEM+AAAA LA I S ++AANAAA A TTGV++A ADEVS AVA+LFS HAQ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGP--NMLAAVNAPAQALLGRPLIGN 118 AYQ QAAAFH + ++ L+ AGAY SAEAANA P L +NAP Q LLGRPLIGN Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 Query 119 GANGAP 124 G NGAP Sbjct 121 GTNGAP 126 >gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|253319014|gb|ACT23617.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|328457295|gb|AEB02718.1| hypothetical protein TBSG_00589 [Mycobacterium tuberculosis KZN 4207] gi|344218399|gb|AEM99029.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1303 Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 72/124 (59%), Positives = 87/124 (71%), Gaps = 1/124 (0%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +SFVIA PEM+ AA +LA I S A AAA V+ A+ADEVS AVAALF +HAQ Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 YQ SAQ A FH + V+TL+ A +Y +AEA N ++LAAVNAP QAL GRPLIGNGA Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 Query 121 NGAP 124 +G+P Sbjct 120 DGSP 123 >gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] gi|289437463|gb|EFD19956.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] Length=998 Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 72/124 (59%), Positives = 87/124 (71%), Gaps = 1/124 (0%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +SFVIA PEM+ AA +LA I S A AAA V+ A+ADEVS AVAALF +HAQ Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 YQ SAQ A FH + V+TL+ A +Y +AEA N ++LAAVNAP QAL GRPLIGNGA Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 Query 121 NGAP 124 +G+P Sbjct 120 DGSP 123 >gi|339297525|gb|AEJ49635.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180] Length=650 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 83/128 (65%), Positives = 97/128 (76%), Gaps = 2/128 (1%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +S+V+A PEM+AAAA LA I S ++AANAAA A TTGV++A ADEVS AVA+LFS HAQ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGP--NMLAAVNAPAQALLGRPLIGN 118 AYQ QAAAFH + ++ L+ AGAY SAEAANA P L +NAP Q LLGRPLIGN Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 Query 119 GANGAPGT 126 G NGAPGT Sbjct 121 GTNGAPGT 128 >gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174290|gb|ACC39400.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1425 Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 94/157 (60%), Positives = 116/157 (74%), Gaps = 0/157 (0%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +SF + +P+M+ AAA +LA I +AI+ + AAAA TT ++ AAADEVS A+A+LF +HA Sbjct 1 MSFTVVEPQMLTAAAADLAKIGAAIDTVSTAAAASTTNLLPAAADEVSAAIASLFGTHAL 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 AYQA AQAA FH V+ L+ A YA+ E AN N+L +NAP QAL GRPLIGNGA Sbjct 61 AYQAIGAQAATFHDGFVQALSRAASRYAATEVANVEQNLLGLINAPTQALFGRPLIGNGA 120 Query 121 NGAPGTGQAGGDGGLLFGNGGNGGSGAPGQAGGAGGA 157 +GA GTGQ G GGLL+GNGG GGSGAPGQ+GG GGA Sbjct 121 DGAAGTGQTGQAGGLLWGNGGAGGSGAPGQSGGTGGA 157 >gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175440|gb|ACC40550.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1397 Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/121 (62%), Positives = 89/121 (74%), Gaps = 0/121 (0%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +SFV PEM+ AAA +L+ I SAI AN+ AAA TT V+ AAADEVS A+AALF +HAQ Sbjct 1 MSFVSVTPEMVVAAASDLSGINSAIAQANSVAAAATTTVLPAAADEVSAAIAALFGTHAQ 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 YQA SA+ AAFH + V++L AG+Y AEAANA +L VNAP QAL GRPLIG+GA Sbjct 61 QYQAISAELAAFHDRFVQSLNTGAGSYLRAEAANAEQGLLGLVNAPTQALFGRPLIGDGA 120 Query 121 N 121 N Sbjct 121 N 121 >gi|294994057|ref|ZP_06799748.1| PE_PGRS family protein [Mycobacterium tuberculosis 210] Length=604 Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 70/113 (62%), Positives = 85/113 (76%), Gaps = 2/113 (1%) Query 13 AAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQAYQAASAQAAAF 72 AAA LA I SAI+ AN AAA T V++AAADEVST +AALF +HA++YQ S QAAAF Sbjct 2 AAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHARSYQTLSTQAAAF 61 Query 73 HAQVVRTLTVDAGAYASAEAANAGPNMLA--AVNAPAQALLGRPLIGNGANGA 123 H++ V+ LT A +YAS EAANA P +A +NAPAQ LLGRPLIGNGA+G+ Sbjct 62 HSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGNGADGS 114 >gi|183982507|ref|YP_001850798.1| PE-PGRS family protein, PE_PGRS15_2 [Mycobacterium marinum M] gi|183175833|gb|ACC40943.1| PE-PGRS family protein, PE_PGRS15_2 [Mycobacterium marinum M] Length=637 Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 79/123 (65%), Positives = 92/123 (75%), Gaps = 2/123 (1%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +SF+IA P+M+AAAA +LASI S IN ANAAA+A TT V +AAADEVSTAVA +F ++AQ Sbjct 1 MSFLIAAPDMVAAAATDLASIGSTINTANAAASALTTSVAAAAADEVSTAVAHVFDTYAQ 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGP--NMLAAVNAPAQALLGRPLIGN 118 YQ A AAFH Q V+TL A AY AEAANA P +L AVNAP QALLGRPLIGN Sbjct 61 EYQTFGAHMAAFHDQFVQTLKTGALAYTGAEAANASPLQELLNAVNAPTQALLGRPLIGN 120 Query 119 GAN 121 G + Sbjct 121 GTD 123 >gi|183985307|ref|YP_001853598.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178633|gb|ACC43743.1| PE-PGRS family protein [Mycobacterium marinum M] Length=600 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/127 (56%), Positives = 92/127 (73%), Gaps = 6/127 (4%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +S++IA PE +A++A +L + S + ANAAAAA TTGV++AA DEVS +AALF +HA Sbjct 1 MSYLIASPEHLASSARDLVRLGSVVADANAAAAAPTTGVLAAAVDEVSIQIAALFGAHAH 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGP------NMLAAVNAPAQALLGRP 114 +YQ SAQAA FH Q V+TL + AYASAEA NA P +L+ +NAP +ALLGRP Sbjct 61 SYQQLSAQAATFHEQFVQTLATASRAYASAEAVNASPLQTLEQQVLSVINAPTEALLGRP 120 Query 115 LIGNGAN 121 LIG+GAN Sbjct 121 LIGDGAN 127 >gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174786|gb|ACC39896.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1483 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 76/121 (63%), Positives = 90/121 (75%), Gaps = 0/121 (0%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +SFV PEM+AAA +LA I S+I+AANAAA A TT V+ AAADEVS A+AALF SHA+ Sbjct 1 MSFVNVAPEMVAAAVEDLAGIGSSISAANAAAVALTTDVVPAAADEVSAAIAALFGSHAR 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 YQA SAQ+AAFH ++V+TL A AY E ANA N+L AVN P QA LGRPLIGNG Sbjct 61 EYQAISAQSAAFHERLVQTLRSGASAYLGTELANAQQNLLNAVNGPTQAWLGRPLIGNGT 120 Query 121 N 121 + Sbjct 121 D 121 >gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobacterium tuberculosis CCDC5079] Length=1330 Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 69/122 (57%), Positives = 85/122 (70%), Gaps = 6/122 (4%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +S VI PE +AAAA ++A I S+I AN+AAA TT V++A ADEVS A+A LF SHA+ Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGP------NMLAAVNAPAQALLGRP 114 YQA S Q AAFH + +TL+ G+Y SAEA NA P N+L A+NAP QALLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 115 LI 116 LI Sbjct 122 LI 123 >gi|183985330|ref|YP_001853621.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178656|gb|ACC43766.1| PE-PGRS family protein [Mycobacterium marinum M] Length=2001 Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 74/130 (57%), Positives = 98/130 (76%), Gaps = 6/130 (4%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +S+VIA P+M+AAAA +L +I S + AAN+AA A+TTG+++AA DEVSTA+A+LFS+ AQ Sbjct 1 MSYVIATPDMLAAAASDLTNIGSTLGAANSAALARTTGLLAAAEDEVSTAIASLFSASAQ 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGP------NMLAAVNAPAQALLGRP 114 YQ S +AA HA+ V +LT AYA+AEA NA P N+LAA+NAP+QAL RP Sbjct 61 EYQMVSTRAAHLHAEFVHSLTRAGAAYAAAEAVNASPLQTLEQNVLAAINAPSQALTARP 120 Query 115 LIGNGANGAP 124 L G+GA+GAP Sbjct 121 LFGDGADGAP 130 >gi|148822671|ref|YP_001287425.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148721198|gb|ABR05823.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] Length=737 Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 69/122 (57%), Positives = 85/122 (70%), Gaps = 6/122 (4%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +S VI PE +AAAA ++A I S+I AN+AAA TT V++A ADEVS A+A LF SHA+ Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGP------NMLAAVNAPAQALLGRP 114 YQA S Q AAFH + +TL+ G+Y SAEA NA P N+L A+NAP QALLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 115 LI 116 LI Sbjct 121 LI 122 >gi|339294428|gb|AEJ46539.1| hypothetical protein CCDC5079_1349 [Mycobacterium tuberculosis CCDC5079] Length=742 Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 69/122 (57%), Positives = 85/122 (70%), Gaps = 6/122 (4%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +S VI PE +AAAA ++A I S+I AN+AAA TT V++A ADEVS A+A LF SHA+ Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGP------NMLAAVNAPAQALLGRP 114 YQA S Q AAFH + +TL+ G+Y SAEA NA P N+L A+NAP QALLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 115 LI 116 LI Sbjct 122 LI 123 >gi|183985103|ref|YP_001853394.1| PE-PGRS family protein, PE_PGRS15 [Mycobacterium marinum M] gi|183178429|gb|ACC43539.1| PE-PGRS family protein, PE_PGRS15 [Mycobacterium marinum M] Length=681 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 83/146 (57%), Positives = 103/146 (71%), Gaps = 12/146 (8%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +S+V+A +++A+ A ELA I +A+N ANAAA TT + +A ADEVS AVAALFSSHA+ Sbjct 1 MSYVVAASDLLASTATELARIDAALNTANAAAVLPTTVLQAAGADEVSAAVAALFSSHAR 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGA---YASAEAANAGP------NMLAAVNAPAQALL 111 AYQA S QA FH +TL+ GA YASAEAAN P ++L VNAP QALL Sbjct 61 AYQALSVQAGQFHQWFTQTLS---GAGLSYASAEAANVSPLQVLERDVLGLVNAPTQALL 117 Query 112 GRPLIGNGANGAPGTGQAGGDGGLLF 137 GRP+IGNGA+GAPG+G G DGG+L Sbjct 118 GRPIIGNGADGAPGSGANGADGGILI 143 >gi|57116866|ref|YP_177813.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148661244|ref|YP_001282767.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|7441232|pir||G70917 hypothetical glycine-rich protein Rv1452c - Mycobacterium tuberculosis (strain H37RV) gi|38490272|emb|CAE55391.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148505396|gb|ABQ73205.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=741 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 69/122 (57%), Positives = 85/122 (70%), Gaps = 6/122 (4%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +S VI PE +AAAA ++A I S+I AN+AAA TT V++A ADEVS A+A LF SHA+ Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGP------NMLAAVNAPAQALLGRP 114 YQA S Q AAFH + +TL+ G+Y SAEA NA P N+L A+NAP QALLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 115 LI 116 LI Sbjct 121 LI 122 >gi|339298066|gb|AEJ50176.1| hypothetical protein CCDC5180_1339 [Mycobacterium tuberculosis CCDC5180] Length=742 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/122 (57%), Positives = 85/122 (70%), Gaps = 6/122 (4%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +S VI PE +AAAA ++A I S+I AN+AAA TT V++A ADEVS A+A LF SHA+ Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGP------NMLAAVNAPAQALLGRP 114 YQA S Q AAFH + +TL+ G+Y SAEA NA P N+L A+NAP QALLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 115 LI 116 LI Sbjct 122 LI 123 >gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004656|emb|CCC43800.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=1006 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/122 (57%), Positives = 85/122 (70%), Gaps = 6/122 (4%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +S VI PE++AAAA ++A I S AAN+ AA TT V++A ADEVS A+A LF SHA+ Sbjct 1 MSLVIVTPELVAAAASDVARIGSGFGAANSTAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGP------NMLAAVNAPAQALLGRP 114 YQA S Q AAFH + V+TL+ G+Y SAEA NA P N+L A+NAP QALLGRP Sbjct 61 EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 115 LI 116 LI Sbjct 121 LI 122 >gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobacterium tuberculosis CCDC5180] Length=1330 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/122 (56%), Positives = 85/122 (70%), Gaps = 6/122 (4%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +S VI PE +AAAA ++A I S+I AN+AAA TT V++A AD+VS A+A LF SHA+ Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADDVSAAIATLFGSHAR 61 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGP------NMLAAVNAPAQALLGRP 114 YQA S Q AAFH + +TL+ G+Y SAEA NA P N+L A+NAP QALLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 115 LI 116 LI Sbjct 122 LI 123 >gi|31792646|ref|NP_855139.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31618236|emb|CAD96154.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=795 Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 69/122 (57%), Positives = 85/122 (70%), Gaps = 6/122 (4%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +S VI PE +AAAA ++A I S+I AN+AAA TT V++A ADEVS A+A LF SHA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGP------NMLAAVNAPAQALLGRP 114 YQA S Q AAFH + +TL+ G+Y SAEA NA P N+L A+NAP QALLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 115 LI 116 LI Sbjct 121 LI 122 >gi|224989857|ref|YP_002644544.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|224772970|dbj|BAH25776.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601401|emb|CCC64074.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=740 Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 69/122 (57%), Positives = 85/122 (70%), Gaps = 6/122 (4%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +S VI PE +AAAA ++A I S+I AN+AAA TT V++A ADEVS A+A LF SHA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGP------NMLAAVNAPAQALLGRP 114 YQA S Q AAFH + +TL+ G+Y SAEA NA P N+L A+NAP QALLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 115 LI 116 LI Sbjct 121 LI 122 >gi|339631132|ref|YP_004722774.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339330488|emb|CCC26153.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=772 Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 92/122 (76%), Gaps = 0/122 (0%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +S++IA P+M+++AAG+LASI S+INA+ AAAA TT ++ AAADEVS +AALFS H + Sbjct 7 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 66 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 YQA + Q AAFH Q LT AGAYASAEA N +L +NAP QALLGRPLIGNGA Sbjct 67 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 126 Query 121 NG 122 +G Sbjct 127 DG 128 >gi|121637382|ref|YP_977605.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121493029|emb|CAL71500.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] Length=740 Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 69/122 (57%), Positives = 85/122 (70%), Gaps = 6/122 (4%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +S VI PE +AAAA ++A I S+I AN+AAA TT V++A ADEVS A+A LF SHA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGP------NMLAAVNAPAQALLGRP 114 YQA S Q AAFH + +TL+ G+Y SAEA NA P N+L A+NAP QALLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 115 LI 116 LI Sbjct 121 LI 122 >gi|121636496|ref|YP_976719.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121492143|emb|CAL70608.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] Length=1303 Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 72/124 (59%), Positives = 87/124 (71%), Gaps = 1/124 (0%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +SFVIA PEM+ AA +LA I S A AAA V+ A+ADEVS AVAALF +HAQ Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 YQ SAQ A FH + V+TL+ A +Y +AEA N ++LAAVNAP QAL GRPLIGNGA Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 Query 121 NGAP 124 +G+P Sbjct 120 DGSP 123 >gi|340626079|ref|YP_004744531.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004269|emb|CCC43410.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=767 Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 73/122 (60%), Positives = 92/122 (76%), Gaps = 0/122 (0%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +S++IA P+M+++AAG+LASI S+INA+ AAAA TT ++ AAADEVS +AALFS H + Sbjct 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 YQA + Q AAFH Q LT AGAYASAEA N +L +NAP QALLGRPL+GNGA Sbjct 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLVGNGA 120 Query 121 NG 122 +G Sbjct 121 DG 122 >gi|254549533|ref|ZP_05139980.1| PE-PGRS family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=734 Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 72/124 (59%), Positives = 87/124 (71%), Gaps = 1/124 (0%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +SFVIA PEM+ AA +LA I S A AAA V+ A+ADEVS AVAALF +HAQ Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 YQ SAQ A FH + V+TL+ A +Y +AEA N ++LAAVNAP QAL GRPLIGNGA Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 Query 121 NGAP 124 +G+P Sbjct 120 DGSP 123 >gi|148660347|ref|YP_001281870.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148504499|gb|ABQ72308.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=1306 Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 72/124 (59%), Positives = 87/124 (71%), Gaps = 1/124 (0%) Query 1 VSFVIAQPEMIAAAAGELASIRSAINAANAAAAAQTTGVMSAAADEVSTAVAALFSSHAQ 60 +SFVIA PEM+ AA +LA I S A AAA V+ A+ADEVS AVAALF +HAQ Sbjct 1 MSFVIATPEMLTTAATDLAKIGST-ITAANTAAAAVAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQAASAQAAAFHAQVVRTLTVDAGAYASAEAANAGPNMLAAVNAPAQALLGRPLIGNGA 120 YQ SAQ A FH + V+TL+ A +Y +AEA N ++LAAVNAP QAL GRPLIGNGA Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVEQSLLAAVNAPTQALFGRPLIGNGA 119 Query 121 NGAP 124 +G+P Sbjct 120 DGSP 123 Lambda K H 0.307 0.138 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1343163911988 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40