BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0301
Length=141
Score E
Sequences producing significant alignments: (Bits) Value
gi|289748072|ref|ZP_06507450.1| conserved hypothetical protein [... 285 2e-75
gi|229598010|pdb|3H87|A Chain A, Rv0301 Rv0300 Toxin Antitoxin C... 284 3e-75
gi|15607442|ref|NP_214815.1| hypothetical protein Rv0301 [Mycoba... 283 6e-75
gi|339630376|ref|YP_004722018.1| hypothetical protein MAF_03030 ... 281 3e-74
gi|145225766|ref|YP_001136444.1| PilT domain-containing protein ... 171 5e-41
gi|315446124|ref|YP_004079003.1| nucleic acid-binding protein, c... 169 1e-40
gi|284044239|ref|YP_003394579.1| PilT protein domain protein [Co... 167 4e-40
gi|336119997|ref|YP_004574775.1| hypothetical protein MLP_43580 ... 164 4e-39
gi|315441643|ref|YP_004074520.1| nucleic acid-binding protein, c... 161 3e-38
gi|296128792|ref|YP_003636042.1| PilT protein domain protein [Ce... 161 4e-38
gi|119854953|ref|YP_935558.1| PilT domain-containing protein [My... 160 4e-38
gi|284034116|ref|YP_003384047.1| PilT protein domain-containing ... 158 3e-37
gi|158318849|ref|YP_001511357.1| PilT domain-containing protein ... 143 7e-33
gi|336117846|ref|YP_004572614.1| hypothetical protein MLP_21970 ... 141 3e-32
gi|326331752|ref|ZP_08198040.1| toxin-antitoxin system, toxin co... 119 2e-25
gi|302534504|ref|ZP_07286846.1| predicted protein [Streptomyces ... 91.7 3e-17
gi|254388989|ref|ZP_05004220.1| conserved membrane protein [Stre... 87.0 8e-16
gi|297199892|ref|ZP_06917289.1| conserved hypothetical protein [... 86.7 1e-15
gi|315504329|ref|YP_004083216.1| pilt protein domain-containing ... 86.7 1e-15
gi|302869194|ref|YP_003837831.1| PilT protein domain-containing ... 86.7 1e-15
gi|343479040|gb|AEM44209.1| hypothetical protein [uncultured bac... 84.3 5e-15
gi|290958509|ref|YP_003489691.1| hypothetical protein SCAB_40681... 82.0 2e-14
gi|239988547|ref|ZP_04709211.1| hypothetical protein SrosN1_1465... 82.0 2e-14
gi|254383838|ref|ZP_04999186.1| conserved hypothetical protein [... 81.6 3e-14
gi|291452355|ref|ZP_06591745.1| conserved hypothetical protein [... 80.9 6e-14
gi|340627758|ref|YP_004746210.1| hypothetical protein MCAN_27841... 80.5 7e-14
gi|345013748|ref|YP_004816102.1| PilT protein domain-containing ... 80.5 7e-14
gi|297154824|gb|ADI04536.1| hypothetical protein SBI_01415 [Stre... 79.3 2e-13
gi|302544584|ref|ZP_07296926.1| PIN family toxin-antitoxin syste... 79.3 2e-13
gi|302557955|ref|ZP_07310297.1| PIN family toxin-antitoxin syste... 79.3 2e-13
gi|311897824|dbj|BAJ30232.1| hypothetical protein KSE_44490 [Kit... 78.6 3e-13
gi|302559325|ref|ZP_07311667.1| PIN family toxin-antitoxin syste... 77.0 9e-13
gi|15609894|ref|NP_217273.1| hypothetical protein Rv2757c [Mycob... 77.0 9e-13
gi|308378090|ref|ZP_07668665.1| putative type I restriction-modi... 76.3 1e-12
gi|297160784|gb|ADI10496.1| hypothetical protein SBI_07376 [Stre... 73.9 7e-12
gi|15607370|ref|NP_214743.1| hypothetical protein Rv0229c [Mycob... 73.6 9e-12
gi|302546829|ref|ZP_07299171.1| PIN family toxin-antitoxin syste... 73.6 1e-11
gi|289572808|ref|ZP_06453035.1| toxin [Mycobacterium tuberculosi... 73.2 1e-11
gi|167968774|ref|ZP_02551051.1| hypothetical protein MtubH3_1235... 72.8 1e-11
gi|297163315|gb|ADI13027.1| PilT protein domain protein [Strepto... 71.6 3e-11
gi|302536099|ref|ZP_07288441.1| conserved hypothetical protein [... 71.6 4e-11
gi|289445761|ref|ZP_06435505.1| toxin [Mycobacterium tuberculosi... 71.6 4e-11
gi|284991226|ref|YP_003409780.1| PilT protein domain-containing ... 71.2 5e-11
gi|289748705|ref|ZP_06508083.1| LOW QUALITY PROTEIN: conserved m... 68.6 3e-10
gi|328882585|emb|CCA55824.1| hypothetical protein SVEN_2538 [Str... 67.8 6e-10
gi|271962881|ref|YP_003337077.1| hypothetical protein Sros_1339 ... 65.1 4e-09
gi|295840079|ref|ZP_06827012.1| PIN family toxin-antitoxin syste... 64.7 4e-09
gi|311897887|dbj|BAJ30295.1| hypothetical protein KSE_45120 [Kit... 62.8 1e-08
gi|269124363|ref|YP_003297733.1| PilT protein domain-containing ... 62.8 2e-08
gi|302552928|ref|ZP_07305270.1| conserved hypothetical protein [... 62.4 2e-08
>gi|289748072|ref|ZP_06507450.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|308369360|ref|ZP_07417480.2| toxin [Mycobacterium tuberculosis SUMu002]
gi|308372857|ref|ZP_07430154.2| toxin [Mycobacterium tuberculosis SUMu005]
11 more sequence titles
Length=143
Score = 285 bits (728), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/141 (100%), Positives = 141/141 (100%), Gaps = 0/141 (0%)
Query 1 VTDQRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFRE 60
VTDQRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFRE
Sbjct 3 VTDQRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFRE 62
Query 61 PPLSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDF 120
PPLSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDF
Sbjct 63 PPLSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDF 122
Query 121 DAIAALTGQKTERLTHRPPSA 141
DAIAALTGQKTERLTHRPPSA
Sbjct 123 DAIAALTGQKTERLTHRPPSA 143
>gi|229598010|pdb|3H87|A Chain A, Rv0301 Rv0300 Toxin Antitoxin Complex From Mycobacterium
Tuberculosis
gi|229598011|pdb|3H87|B Chain B, Rv0301 Rv0300 Toxin Antitoxin Complex From Mycobacterium
Tuberculosis
Length=156
Score = 284 bits (726), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 141/141 (100%), Positives = 141/141 (100%), Gaps = 0/141 (0%)
Query 1 VTDQRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFRE 60
VTDQRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFRE
Sbjct 16 VTDQRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFRE 75
Query 61 PPLSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDF 120
PPLSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDF
Sbjct 76 PPLSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDF 135
Query 121 DAIAALTGQKTERLTHRPPSA 141
DAIAALTGQKTERLTHRPPSA
Sbjct 136 DAIAALTGQKTERLTHRPPSA 156
>gi|15607442|ref|NP_214815.1| hypothetical protein Rv0301 [Mycobacterium tuberculosis H37Rv]
gi|15839686|ref|NP_334723.1| hypothetical protein MT0314 [Mycobacterium tuberculosis CDC1551]
gi|31791480|ref|NP_853973.1| hypothetical protein Mb0309 [Mycobacterium bovis AF2122/97]
65 more sequence titles
Length=141
Score = 283 bits (724), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 140/141 (99%), Positives = 141/141 (100%), Gaps = 0/141 (0%)
Query 1 VTDQRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFRE 60
+TDQRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFRE
Sbjct 1 MTDQRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFRE 60
Query 61 PPLSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDF 120
PPLSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDF
Sbjct 61 PPLSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDF 120
Query 121 DAIAALTGQKTERLTHRPPSA 141
DAIAALTGQKTERLTHRPPSA
Sbjct 121 DAIAALTGQKTERLTHRPPSA 141
>gi|339630376|ref|YP_004722018.1| hypothetical protein MAF_03030 [Mycobacterium africanum GM041182]
gi|339329732|emb|CCC25375.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=141
Score = 281 bits (719), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 139/141 (99%), Positives = 140/141 (99%), Gaps = 0/141 (0%)
Query 1 VTDQRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFRE 60
+TDQRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFRE
Sbjct 1 MTDQRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFRE 60
Query 61 PPLSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDF 120
PPLSAMPVEYLTPRIEDRALEVQTLLADRGHH GPSIPDLLIAATAELSGLTVLHVDKDF
Sbjct 61 PPLSAMPVEYLTPRIEDRALEVQTLLADRGHHHGPSIPDLLIAATAELSGLTVLHVDKDF 120
Query 121 DAIAALTGQKTERLTHRPPSA 141
DAIAALTGQKTERLTHRPPSA
Sbjct 121 DAIAALTGQKTERLTHRPPSA 141
>gi|145225766|ref|YP_001136444.1| PilT domain-containing protein [Mycobacterium gilvum PYR-GCK]
gi|145218252|gb|ABP47656.1| PilT protein domain protein [Mycobacterium gilvum PYR-GCK]
Length=137
Score = 171 bits (432), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/129 (66%), Positives = 97/129 (76%), Gaps = 0/129 (0%)
Query 6 WLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLSA 65
WLIDKSA RL SPD+E+W RI+RGLV I+ VTRLE+G+S E AR E PPL+
Sbjct 6 WLIDKSAYTRLAVSPDVELWMERIDRGLVRISTVTRLEIGYSFRTAEQARSEVASPPLTL 65
Query 66 MPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAA 125
MP+EY+TP +EDRA EVQ LADRG HR PSIPDLL+AATAE +GLTVLH+ KDFD IA
Sbjct 66 MPIEYMTPTVEDRAREVQLTLADRGMHRAPSIPDLLVAATAEQAGLTVLHLHKDFDLIAG 125
Query 126 LTGQKTERL 134
TGQ E L
Sbjct 126 TTGQPVEAL 134
>gi|315446124|ref|YP_004079003.1| nucleic acid-binding protein, contains PIN domain [Mycobacterium
sp. Spyr1]
gi|315264427|gb|ADU01169.1| predicted nucleic acid-binding protein, contains PIN domain [Mycobacterium
sp. Spyr1]
Length=137
Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/129 (64%), Positives = 97/129 (76%), Gaps = 0/129 (0%)
Query 6 WLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLSA 65
WLIDKSA RL SPD+E+W RI+RGLV I+ VTRLE+G+S AR E PPL+
Sbjct 6 WLIDKSAYTRLAVSPDVELWMERIDRGLVRISTVTRLEIGYSFRTAAQARSEVASPPLTL 65
Query 66 MPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAA 125
MP+EY+TP +EDRA E+Q LADRG HR PSIPDLL+AATAE +GLTVLH+ KDFD IA
Sbjct 66 MPIEYMTPTVEDRAREIQLTLADRGMHRAPSIPDLLVAATAEQAGLTVLHLHKDFDLIAG 125
Query 126 LTGQKTERL 134
+TGQ E L
Sbjct 126 ITGQPVEAL 134
>gi|284044239|ref|YP_003394579.1| PilT protein domain protein [Conexibacter woesei DSM 14684]
gi|283948460|gb|ADB51204.1| PilT protein domain protein [Conexibacter woesei DSM 14684]
Length=141
Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/130 (66%), Positives = 99/130 (77%), Gaps = 0/130 (0%)
Query 6 WLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLSA 65
WLIDKSALVRL SPD E+W+ RIER LV I VT LEVG+SA E R R+PP+++
Sbjct 10 WLIDKSALVRLGRSPDSELWAGRIERRLVRIATVTLLEVGYSARDAEDLRAGLRQPPVAS 69
Query 66 MPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAA 125
MPVEY+ P EDRA+EV LLADRGHHR PS+PDLLIAA AE +GL +LH DK FD IA
Sbjct 70 MPVEYMAPASEDRAVEVLGLLADRGHHRAPSVPDLLIAAIAERAGLALLHQDKAFDLIAE 129
Query 126 LTGQKTERLT 135
+TGQ TERL+
Sbjct 130 ITGQPTERLS 139
>gi|336119997|ref|YP_004574775.1| hypothetical protein MLP_43580 [Microlunatus phosphovorus NM-1]
gi|334687787|dbj|BAK37372.1| hypothetical protein MLP_43580 [Microlunatus phosphovorus NM-1]
Length=139
Score = 164 bits (415), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/134 (65%), Positives = 98/134 (74%), Gaps = 2/134 (1%)
Query 6 WLIDKSALV--RLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPL 63
WL+DKSA V +L D E+W RI+RGLV I+ +TRLE+G+SA G R FR PP+
Sbjct 6 WLLDKSAFVGLQLDQVVDAEVWKTRIDRGLVRISPITRLELGYSARTGVDGREGFRRPPV 65
Query 64 SAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAI 123
S MPVE +TP IEDRA EVQ LLADRG HR PSIPDLLIAATAE +GLTVL VDKDFD I
Sbjct 66 SLMPVERITPAIEDRAEEVQMLLADRGQHRAPSIPDLLIAATAEKAGLTVLAVDKDFDLI 125
Query 124 AALTGQKTERLTHR 137
A +TGQ E L R
Sbjct 126 AEVTGQPVETLALR 139
>gi|315441643|ref|YP_004074520.1| nucleic acid-binding protein, contains PIN domain [Mycobacterium
sp. Spyr1]
gi|315265298|gb|ADU02039.1| predicted nucleic acid-binding protein, contains PIN domain [Mycobacterium
sp. Spyr1]
Length=134
Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/129 (62%), Positives = 95/129 (74%), Gaps = 0/129 (0%)
Query 6 WLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLSA 65
WLIDKSA +L SPD + W RIERGLV ++ VTRL++G+S G AR E PPL+
Sbjct 4 WLIDKSAYTQLVASPDAQAWVERIERGLVRMSTVTRLQIGYSFRNGSQARSESGAPPLAL 63
Query 66 MPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAA 125
MP+EYLTP EDRA+ VQ LADRG HR P+IPDLL+AA AE++GLTVL +D DFD IA
Sbjct 64 MPLEYLTPAAEDRAVGVQLQLADRGLHRAPAIPDLLVAAVAEMAGLTVLALDTDFDLIAQ 123
Query 126 LTGQKTERL 134
+TGQ ERL
Sbjct 124 VTGQAVERL 132
>gi|296128792|ref|YP_003636042.1| PilT protein domain protein [Cellulomonas flavigena DSM 20109]
gi|296020607|gb|ADG73843.1| PilT protein domain protein [Cellulomonas flavigena DSM 20109]
Length=137
Score = 161 bits (407), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/129 (66%), Positives = 97/129 (76%), Gaps = 0/129 (0%)
Query 6 WLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLSA 65
WL+DKSALVRL + + ++W R+ERGL+ + VTRLEVGFSA G AR PP+S
Sbjct 6 WLVDKSALVRLPYAVERDLWQARLERGLLRLAHVTRLEVGFSALSGRSAREAASAPPVSL 65
Query 66 MPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAA 125
MPVE+LTP IE RALEVQTLLADRG HR SIPDLL+AATAE G+TVL VDK FD IA
Sbjct 66 MPVEHLTPGIEARALEVQTLLADRGEHRAASIPDLLVAATAEKLGMTVLAVDKGFDLIAH 125
Query 126 LTGQKTERL 134
+TGQ ERL
Sbjct 126 VTGQPVERL 134
>gi|119854953|ref|YP_935558.1| PilT domain-containing protein [Mycobacterium sp. KMS]
gi|119697671|gb|ABL94743.1| PilT protein domain protein [Mycobacterium sp. KMS]
Length=136
Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/129 (62%), Positives = 95/129 (74%), Gaps = 0/129 (0%)
Query 6 WLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLSA 65
WLIDKSA +L SPD + W RIERGLV ++ VTRL++G+S G AR E PPL+
Sbjct 6 WLIDKSAYTQLVASPDAQAWVERIERGLVRMSTVTRLQIGYSFRNGPQARSESGAPPLAL 65
Query 66 MPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAA 125
MP+EYLTP EDRA+ VQ LADRG HR P+IPDLL+AA AE++GLTVL +D DFD IA
Sbjct 66 MPLEYLTPAAEDRAVGVQLQLADRGLHRAPAIPDLLVAAVAEMAGLTVLALDTDFDLIAQ 125
Query 126 LTGQKTERL 134
+TGQ ERL
Sbjct 126 VTGQAVERL 134
>gi|284034116|ref|YP_003384047.1| PilT protein domain-containing protein [Kribbella flavida DSM
17836]
gi|283813409|gb|ADB35248.1| PilT protein domain protein [Kribbella flavida DSM 17836]
Length=137
Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/136 (64%), Positives = 102/136 (75%), Gaps = 0/136 (0%)
Query 1 VTDQRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFRE 60
+T+ WLIDKSALVRL D P ++ W+NRI+RGLVHIT VT LEVGFS E R +
Sbjct 1 MTETTWLIDKSALVRLGDGPQIDQWANRIDRGLVHITPVTLLEVGFSTRSAEEHRMTLQF 60
Query 61 PPLSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDF 120
PPLS+MPV TP IE RA+ VQ LLA G HR PS+PDLLIAATAEL+GLTVLH+D+DF
Sbjct 61 PPLSSMPVVNSTPAIESRAVAVQALLAATGQHRAPSVPDLLIAATAELAGLTVLHLDEDF 120
Query 121 DAIAALTGQKTERLTH 136
+ IA +TGQ ERL+
Sbjct 121 ELIAGITGQPVERLSQ 136
>gi|158318849|ref|YP_001511357.1| PilT domain-containing protein [Frankia sp. EAN1pec]
gi|158114254|gb|ABW16451.1| PilT protein domain protein [Frankia sp. EAN1pec]
Length=159
Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/115 (65%), Positives = 86/115 (75%), Gaps = 0/115 (0%)
Query 20 PDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLSAMPVEYLTPRIEDRA 79
PD + W + I+ GL+ IT VT LEVGFSA + R R +SAMPVE TPRIE RA
Sbjct 42 PDADRWLSHIQHGLIRITTVTILEVGFSARSAQDLRVRLRRSLVSAMPVENTTPRIEARA 101
Query 80 LEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAALTGQKTERL 134
+E+Q LLA GHHR PS+PDL+IAATAEL+GL VLHVDKDF+ IAALTGQ TERL
Sbjct 102 VEIQELLASTGHHRAPSVPDLIIAATAELAGLVVLHVDKDFELIAALTGQPTERL 156
>gi|336117846|ref|YP_004572614.1| hypothetical protein MLP_21970 [Microlunatus phosphovorus NM-1]
gi|334685626|dbj|BAK35211.1| hypothetical protein MLP_21970 [Microlunatus phosphovorus NM-1]
Length=139
Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/130 (58%), Positives = 89/130 (69%), Gaps = 0/130 (0%)
Query 6 WLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLSA 65
WLIDKSALVRL SPD W NRI+RGLV +T +T E+GFS + R PPL+
Sbjct 7 WLIDKSALVRLPASPDQATWLNRIQRGLVTVTPLTMAELGFSTMSADDWTRLQHGPPLAL 66
Query 66 MPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAA 125
MP+ ++PR E RALEVQ LLA RG HR + DL IAA AE SGLT+LHVDKDFD I+
Sbjct 67 MPLIGISPRAESRALEVQGLLAGRGRHRAVGVADLFIAAVAEDSGLTLLHVDKDFDLISE 126
Query 126 LTGQKTERLT 135
+T Q ERL+
Sbjct 127 VTNQPVERLS 136
>gi|326331752|ref|ZP_08198040.1| toxin-antitoxin system, toxin component, PIN family [Nocardioidaceae
bacterium Broad-1]
gi|325950551|gb|EGD42603.1| toxin-antitoxin system, toxin component, PIN family [Nocardioidaceae
bacterium Broad-1]
Length=137
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/129 (51%), Positives = 79/129 (62%), Gaps = 0/129 (0%)
Query 6 WLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLSA 65
WL+ +SAL R++ SPD E WS IE G V IT T LE+G A + + P+
Sbjct 7 WLVHRSALARMSTSPDAEKWSRLIELGQVRITTTTLLEIGHLARSEQEWSELVEDVPVVH 66
Query 66 MPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAA 125
MP+ LTPR E RALE+Q L+ G HR PS+PDLL+AA AE + LTVLH D D D I
Sbjct 67 MPLATLTPRTEARALEIQRLVLRGGRHRAPSVPDLLVAAVAEEADLTVLHADNDVDLITR 126
Query 126 LTGQKTERL 134
TGQ ERL
Sbjct 127 TTGQPVERL 135
>gi|302534504|ref|ZP_07286846.1| predicted protein [Streptomyces sp. C]
gi|302443399|gb|EFL15215.1| predicted protein [Streptomyces sp. C]
Length=140
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/138 (46%), Positives = 82/138 (60%), Gaps = 5/138 (3%)
Query 6 WLIDKSALVRLTDSPDM-EIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLS 64
+LID SA+VR+ + D+ + W + + G++ I VT LE+ FSA+ +A R +E L
Sbjct 6 YLIDTSAVVRVLTNEDVRKAWRDHLAEGVIGICEVTELEILFSAKS--LADRLEKEALLG 63
Query 65 AMPVEYLTPR-IEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAI 123
+ P + RA VQ LL RG HR DLL+AATAEL+GLT+LH DKDFDAI
Sbjct 64 ELFNWTPVPESVYVRARAVQRLLTGRGEHRSAGPVDLLVAATAELTGLTLLHYDKDFDAI 123
Query 124 AALTGQKTERLTHRPPSA 141
A TGQ T R RP A
Sbjct 124 ARATGQPT-RWVARPGEA 140
>gi|254388989|ref|ZP_05004220.1| conserved membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|294814925|ref|ZP_06773568.1| toxin [Streptomyces clavuligerus ATCC 27064]
gi|326443296|ref|ZP_08218030.1| PilT protein domain-containing protein [Streptomyces clavuligerus
ATCC 27064]
gi|197702707|gb|EDY48519.1| conserved membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|294327524|gb|EFG09167.1| toxin [Streptomyces clavuligerus ATCC 27064]
Length=139
Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/134 (43%), Positives = 72/134 (54%), Gaps = 4/134 (2%)
Query 5 RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREF-REPPL 63
R+L+D S R ++ RGLV +G+ LE+ FSA + R R
Sbjct 5 RYLVDMSVWARAGKPGVRAALEPKLLRGLVGTSGIIDLELLFSARNADDYERMLGRRQAF 64
Query 64 SAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAI 123
P T I RA+EVQ A +G+HR SIPDLL+AATAE GLT+LH D DFD I
Sbjct 65 EWFPT---TDEIVARAIEVQGFCARKGNHRALSIPDLLVAATAERHGLTLLHYDGDFDLI 121
Query 124 AALTGQKTERLTHR 137
A +TGQ TE + R
Sbjct 122 AEVTGQLTEWIVPR 135
>gi|297199892|ref|ZP_06917289.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197710357|gb|EDY54391.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=139
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/129 (42%), Positives = 72/129 (56%), Gaps = 1/129 (0%)
Query 6 WLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLSA 65
+LID SALVR+ P W +E GL+ +T +E +SA E R E + +
Sbjct 6 YLIDTSALVRILKHPARPRWEKPLEEGLISRCPMTEVEFLYSARNAE-DRSELVQDLDAL 64
Query 66 MPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAA 125
L R RA +VQ L ++G HR DLL+AATAEL GLT+LH D DF+ IA+
Sbjct 65 FGWTPLDDRAVSRAWDVQRELTEKGQHRSAGAVDLLVAATAELQGLTMLHYDNDFETIAS 124
Query 126 LTGQKTERL 134
+TGQ T+ L
Sbjct 125 VTGQPTQWL 133
>gi|315504329|ref|YP_004083216.1| pilt protein domain-containing protein [Micromonospora sp. L5]
gi|315410948|gb|ADU09065.1| PilT protein domain protein [Micromonospora sp. L5]
Length=139
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/134 (42%), Positives = 76/134 (57%), Gaps = 8/134 (5%)
Query 1 VTDQRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARRE--- 57
+T +R+L+DKSAL R + +RGL+ + G +EV SA + A+R
Sbjct 1 MTRERYLLDKSALARWPKPAVAPVLDELSDRGLLAVCGAIEIEVVHSARSAKDAKRARWL 60
Query 58 FREPPLSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVD 117
R AMP + I DRA+++Q +G+HR S+ DLLIAATAE G+TVLH D
Sbjct 61 LRGFDWLAMPDD-----IWDRAIDIQVQALHKGNHRALSMADLLIAATAERHGVTVLHYD 115
Query 118 KDFDAIAALTGQKT 131
DFD I A+TGQ T
Sbjct 116 GDFDLITAITGQPT 129
>gi|302869194|ref|YP_003837831.1| PilT protein domain-containing protein [Micromonospora aurantiaca
ATCC 27029]
gi|302572053|gb|ADL48255.1| PilT protein domain protein [Micromonospora aurantiaca ATCC 27029]
Length=139
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/134 (42%), Positives = 76/134 (57%), Gaps = 8/134 (5%)
Query 1 VTDQRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARRE--- 57
+T +R+L+DKSAL R + +RGL+ + G +EV SA + A+R
Sbjct 1 MTRERYLLDKSALARWPKPAVAPVLDELSDRGLLAVCGAIEIEVIHSARSAKDAKRARWL 60
Query 58 FREPPLSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVD 117
R AMP + I DRA+++Q +G+HR S+ DLLIAATAE G+TVLH D
Sbjct 61 LRGFDWLAMPDD-----IWDRAIDIQVQTLHKGNHRALSMADLLIAATAERHGVTVLHYD 115
Query 118 KDFDAIAALTGQKT 131
DFD I A+TGQ T
Sbjct 116 GDFDLITAITGQPT 129
>gi|343479040|gb|AEM44209.1| hypothetical protein [uncultured bacterium]
Length=139
Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/141 (44%), Positives = 77/141 (55%), Gaps = 12/141 (8%)
Query 5 RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLS 64
R+LIDKSAL R T E+ ER L+ + T E+ SA G A R +S
Sbjct 4 RYLIDKSALARWTKPSVKEVLKPLHERYLLAVCQPTEFEMIHSARDGSEATR------IS 57
Query 65 AMPVEYLTPRIED----RALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDF 120
+ R +D RALE+Q + G HR S+PDLLIAATAEL+ TVLH D DF
Sbjct 58 TWLHAFDYLRTDDDTFIRALEIQRHALNAGFHRALSLPDLLIAATAELNRRTVLHYDGDF 117
Query 121 DAIAALTGQKTERLTHRPPSA 141
D IA+LTGQ TE + PP +
Sbjct 118 DMIASLTGQPTEWVV--PPGS 136
>gi|290958509|ref|YP_003489691.1| hypothetical protein SCAB_40681 [Streptomyces scabiei 87.22]
gi|260648035|emb|CBG71143.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=139
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/141 (44%), Positives = 76/141 (54%), Gaps = 12/141 (8%)
Query 5 RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLS 64
R+LIDKSAL R T E+ ER L+ + T E+ SA A R +S
Sbjct 4 RYLIDKSALARWTKPSVKEVLKPLHERYLLAVCQPTEFEMIHSARDSSEATR------IS 57
Query 65 AMPVEYLTPRIED----RALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDF 120
+ R +D RALE+Q + G HR S+PDLLIAATAEL+ TVLH D DF
Sbjct 58 TWLHAFDYLRTDDDTFTRALEIQRHALNAGFHRALSLPDLLIAATAELNRRTVLHYDGDF 117
Query 121 DAIAALTGQKTERLTHRPPSA 141
D IA+LTGQ TE + PP +
Sbjct 118 DMIASLTGQPTEWVV--PPGS 136
>gi|239988547|ref|ZP_04709211.1| hypothetical protein SrosN1_14659 [Streptomyces roseosporus NRRL
11379]
gi|291445528|ref|ZP_06584918.1| PilT protein domain-containing protein [Streptomyces roseosporus
NRRL 15998]
gi|291348475|gb|EFE75379.1| PilT protein domain-containing protein [Streptomyces roseosporus
NRRL 15998]
Length=135
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/132 (44%), Positives = 73/132 (56%), Gaps = 2/132 (1%)
Query 6 WLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLSA 65
+LID SAL R+ E W+ RI GLV + +T LE+ +SA E R + RE L+
Sbjct 6 YLIDTSALARILLRQSTEDWTRRISAGLVALCDLTELELLYSARSTE-DREKVRER-LAL 63
Query 66 MPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAA 125
+ + RA VQ L +G HR DLL+AATAE SGLT+LH D+DF+ IA
Sbjct 64 YTWCPMPDGVFRRARTVQDQLTAKGEHRNAGPVDLLLAATAEQSGLTLLHYDRDFETIAR 123
Query 126 LTGQKTERLTHR 137
TGQ T L R
Sbjct 124 TTGQPTRMLDLR 135
>gi|254383838|ref|ZP_04999186.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194342731|gb|EDX23697.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length=138
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/128 (46%), Positives = 72/128 (57%), Gaps = 6/128 (4%)
Query 4 QRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPL 63
+R+LIDKSAL R + GL+ + G LEV +SA ARR RE
Sbjct 3 ERFLIDKSALARYPKPAVHAVIDPLHNAGLLAVCGAVELEVMYSARSKADARR-VRE--- 58
Query 64 SAMPVEYL-TP-RIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFD 121
++L TP DRALEVQ L G+ + S+PDL+IAATAE G TVLH D D+D
Sbjct 59 GMAAFDWLPTPDEAWDRALEVQDALIGEGNWKAVSLPDLIIAATAERHGATVLHYDGDYD 118
Query 122 AIAALTGQ 129
IAA+TGQ
Sbjct 119 MIAAVTGQ 126
>gi|291452355|ref|ZP_06591745.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|291355304|gb|EFE82206.1| conserved hypothetical protein [Streptomyces albus J1074]
Length=135
Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/124 (43%), Positives = 70/124 (57%), Gaps = 2/124 (1%)
Query 6 WLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLSA 65
+LID SALVR+ W +RI GLV + +T LE+ +SA + R+ LS
Sbjct 6 YLIDTSALVRVLQRRVPREWEHRIGAGLVSLCDLTELELLYSAR--STSDRDAIRDRLSL 63
Query 66 MPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAA 125
+ + RA VQ LL D+G HR DLL+AATAE SGLT+LH D+DF+ +A
Sbjct 64 FTWCPMPDGVFRRARTVQALLTDKGEHRSAGAVDLLLAATAEQSGLTLLHHDRDFETVAR 123
Query 126 LTGQ 129
TGQ
Sbjct 124 ATGQ 127
>gi|340627758|ref|YP_004746210.1| hypothetical protein MCAN_27841 [Mycobacterium canettii CIPT
140010059]
gi|340005948|emb|CCC45115.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=138
Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/132 (44%), Positives = 73/132 (56%), Gaps = 9/132 (6%)
Query 5 RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARR--EFREPP 62
R+L+DKSA R +ERGL+ G+T LE G SA E R +R
Sbjct 4 RYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA 63
Query 63 LSAMPVEYL-TP-RIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDF 120
L EY+ TP + DRA E+Q L D+G HR IPDL+IAA AE G+ V+H D+DF
Sbjct 64 L-----EYVNTPDTVWDRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDF 118
Query 121 DAIAALTGQKTE 132
+ IAA+T Q E
Sbjct 119 ERIAAITRQPVE 130
>gi|345013748|ref|YP_004816102.1| PilT protein domain-containing protein [Streptomyces violaceusniger
Tu 4113]
gi|344040097|gb|AEM85822.1| PilT protein domain protein [Streptomyces violaceusniger Tu 4113]
Length=139
Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/132 (39%), Positives = 73/132 (56%), Gaps = 2/132 (1%)
Query 4 QRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPL 63
+R+LID SAL R E+ E G++ + G +EV +SA A+R L
Sbjct 3 ERFLIDNSALQRWRKPKVAEVLDPLHEDGVLAVCGPVEMEVMYSARNDNDAKR--LHWFL 60
Query 64 SAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAI 123
S + + DRA ++Q +G+HR S+PDLLIAA AE +TVLH D+D+D I
Sbjct 61 SGFDYLPMPDEVWDRAKDIQRQAITKGNHRALSMPDLLIAAAAERHAVTVLHYDQDYDMI 120
Query 124 AALTGQKTERLT 135
AA+TGQ + +T
Sbjct 121 AAITGQPMKWVT 132
>gi|297154824|gb|ADI04536.1| hypothetical protein SBI_01415 [Streptomyces bingchenggensis
BCW-1]
Length=139
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/127 (41%), Positives = 72/127 (57%), Gaps = 4/127 (3%)
Query 4 QRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARR-EFREPP 62
+R+LID SAL R E+ E G++ + G +EV +SA A+R +
Sbjct 3 ERFLIDNSALQRWRKPKVAEVLDPLHEDGVLAVCGPVEIEVMYSARNENDAKRLHWFLAG 62
Query 63 LSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDA 122
+P +T + DRA +VQ +G+HR S+PDLLIAA AE +TVLH D+D+D
Sbjct 63 FDYLP---MTDEVWDRAKDVQRQAIAKGNHRALSMPDLLIAAAAERHVVTVLHYDQDYDM 119
Query 123 IAALTGQ 129
IAA+TGQ
Sbjct 120 IAAITGQ 126
>gi|302544584|ref|ZP_07296926.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
hygroscopicus ATCC 53653]
gi|302462202|gb|EFL25295.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
himastatinicus ATCC 53653]
Length=138
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/125 (42%), Positives = 69/125 (56%), Gaps = 2/125 (1%)
Query 4 QRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPL 63
R+LIDKSAL R E + ERGL+ +TG +E+ +SA A R R L
Sbjct 3 HRYLIDKSALARSARPAVRETLNPLHERGLLCVTGAVEVEILYSARNANEADRLGRW--L 60
Query 64 SAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAI 123
+ + D AL++Q +G+HR S+ DLLIAATA+ G TVLH D D+D I
Sbjct 61 TGFDYLPCPDEVWDAALDIQRQAIAKGNHRAFSMADLLIAATAQRHGATVLHYDGDYDQI 120
Query 124 AALTG 128
AA+TG
Sbjct 121 AAITG 125
>gi|302557955|ref|ZP_07310297.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
griseoflavus Tu4000]
gi|302475573|gb|EFL38666.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
griseoflavus Tu4000]
Length=136
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/129 (40%), Positives = 69/129 (54%), Gaps = 4/129 (3%)
Query 5 RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAEC-GEIARREFREPPL 63
R+LIDKSAL R + I+RGL+ +TG +E+ +SA E + +
Sbjct 2 RYLIDKSALARRAKPAVRGVLDPLIQRGLLAVTGAVEMEILYSARNPAEAGKLRYWLAGF 61
Query 64 SAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAI 123
+P DRA +VQ G+HR S+ DLLIAATAE G+ VLH D+D++ I
Sbjct 62 DYLPC---PDECWDRAKDVQAQATRTGNHRALSMADLLIAATAERHGVRVLHYDEDYEQI 118
Query 124 AALTGQKTE 132
A LTGQ E
Sbjct 119 AELTGQAHE 127
>gi|311897824|dbj|BAJ30232.1| hypothetical protein KSE_44490 [Kitasatospora setae KM-6054]
Length=139
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/132 (41%), Positives = 73/132 (56%), Gaps = 8/132 (6%)
Query 1 VTDQRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAEC---GEIARRE 57
++ +R+LIDKSAL R + + +R L+ I+ +EV +SA E R
Sbjct 1 MSRERFLIDKSALARWGKPAVRPVLDDLSQRALLAISPTVEMEVLYSARTLAEAERLRHL 60
Query 58 FREPPLSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVD 117
R + P E + DRA +VQ RG+HR S+ DLLIAATAE G+TVLH D
Sbjct 61 LRGFDYLSCPDE-----VWDRAKQVQQQALFRGNHRALSMADLLIAATAERHGVTVLHYD 115
Query 118 KDFDAIAALTGQ 129
D+D IAA+TGQ
Sbjct 116 GDYDMIAAITGQ 127
>gi|302559325|ref|ZP_07311667.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
griseoflavus Tu4000]
gi|302476943|gb|EFL40036.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
griseoflavus Tu4000]
Length=139
Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/131 (44%), Positives = 69/131 (53%), Gaps = 10/131 (7%)
Query 6 WLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLSA 65
+LIDKSAL R T E+ ER L+ + T E+ SA A R +S
Sbjct 5 YLIDKSALARWTKPSVKEVLKPLHERYLLAVCQPTEYEMIHSARDSSEATR------IST 58
Query 66 MPVEYLTPRIED----RALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFD 121
+ R +D RALE+Q + G HR S+PDLLIAATAEL TVLH D DFD
Sbjct 59 WLHAFDYLRTDDDVFTRALEIQRHALNAGFHRALSLPDLLIAATAELHRRTVLHYDGDFD 118
Query 122 AIAALTGQKTE 132
IA+LTGQ E
Sbjct 119 MIASLTGQPAE 129
>gi|15609894|ref|NP_217273.1| hypothetical protein Rv2757c [Mycobacterium tuberculosis H37Rv]
gi|15842295|ref|NP_337332.1| hypothetical protein MT2827 [Mycobacterium tuberculosis CDC1551]
gi|31793931|ref|NP_856424.1| hypothetical protein Mb2778c [Mycobacterium bovis AF2122/97]
77 more sequence titles
Length=138
Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/132 (43%), Positives = 72/132 (55%), Gaps = 9/132 (6%)
Query 5 RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARR--EFREPP 62
R+L+DKSA R +ERGL+ G+T LE G SA E R +R
Sbjct 4 RYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA 63
Query 63 LSAMPVEYL-TP-RIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDF 120
L EY+ TP + RA E+Q L D+G HR IPDL+IAA AE G+ V+H D+DF
Sbjct 64 L-----EYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDF 118
Query 121 DAIAALTGQKTE 132
+ IAA+T Q E
Sbjct 119 ERIAAITRQPVE 130
>gi|308378090|ref|ZP_07668665.1| putative type I restriction-modification system, M subunit [Mycobacterium
tuberculosis SUMu009]
gi|308353571|gb|EFP42422.1| putative type I restriction-modification system, M subunit [Mycobacterium
tuberculosis SUMu009]
Length=718
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/132 (43%), Positives = 72/132 (55%), Gaps = 9/132 (6%)
Query 5 RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARR--EFREPP 62
R+L+DKSA R +ERGL+ G+T LE G SA E R +R
Sbjct 14 RYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA 73
Query 63 LSAMPVEYL-TP-RIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDF 120
L EY+ TP + RA E+Q L D+G HR IPDL+IAA AE G+ V+H D+DF
Sbjct 74 L-----EYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDF 128
Query 121 DAIAALTGQKTE 132
+ IAA+T Q E
Sbjct 129 ERIAAITRQPVE 140
>gi|297160784|gb|ADI10496.1| hypothetical protein SBI_07376 [Streptomyces bingchenggensis
BCW-1]
Length=138
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/130 (43%), Positives = 66/130 (51%), Gaps = 8/130 (6%)
Query 5 RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAEC---GEIARREFREP 61
R+LIDKSAL R + GL+ + G LEV SA E R E R
Sbjct 4 RYLIDKSALARYPKPAARAVIEPLHNAGLLAVCGAVELEVLHSARSKGDAERIRDEMRGF 63
Query 62 PLSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFD 121
P E DRALEVQT L G+ + S+ DL+IAATAE + VLH D D+D
Sbjct 64 DWLPTPDEAW-----DRALEVQTQLIAAGNWKALSVSDLVIAATAERHSVIVLHYDGDYD 118
Query 122 AIAALTGQKT 131
IAA+TGQ T
Sbjct 119 MIAAVTGQST 128
>gi|15607370|ref|NP_214743.1| hypothetical protein Rv0229c [Mycobacterium tuberculosis H37Rv]
gi|15839609|ref|NP_334646.1| hypothetical protein MT0239 [Mycobacterium tuberculosis CDC1551]
gi|31791406|ref|NP_853899.1| hypothetical protein Mb0234c [Mycobacterium bovis AF2122/97]
42 more sequence titles
Length=226
Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/128 (43%), Positives = 67/128 (53%), Gaps = 3/128 (2%)
Query 5 RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLS 64
++L+D S + RL+ E G V T +T LEVG+SA +R LS
Sbjct 93 KYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLM--VALS 150
Query 65 AMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIA 124
A + T RAL +Q LLA R RG IPDLLIAA E GL VLH D DFD IA
Sbjct 151 AFDLIESTASHHRRALGIQRLLAARSQ-RGRKIPDLLIAAAGEEHGLVVLHYDADFDLIA 209
Query 125 ALTGQKTE 132
A+TGQ +
Sbjct 210 AVTGQPCQ 217
>gi|302546829|ref|ZP_07299171.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
hygroscopicus ATCC 53653]
gi|302464447|gb|EFL27540.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
himastatinicus ATCC 53653]
Length=140
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/135 (39%), Positives = 70/135 (52%), Gaps = 2/135 (1%)
Query 4 QRWLIDKSALVRLTDSPDME-IWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPP 62
+ +LID SA RL SP +E W+ ++ G V + +T LE+ A G R
Sbjct 3 ESYLIDTSACNRLFRSPAVERHWAGILDEGRVAVCEITELEL-VRATGGRDERAVLERYL 61
Query 63 LSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDA 122
A + R RA +VQ LL H+GP DL+ AATAEL GLT+LH D DF+
Sbjct 62 HDAFGWTPVPDRALTRARQVQDLLVATSWHQGPGAVDLMTAATAELCGLTLLHYDADFET 121
Query 123 IAALTGQKTERLTHR 137
IA +TGQ + + R
Sbjct 122 IAKVTGQPHQWIAPR 136
>gi|289572808|ref|ZP_06453035.1| toxin [Mycobacterium tuberculosis K85]
gi|289537239|gb|EFD41817.1| toxin [Mycobacterium tuberculosis K85]
Length=547
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/128 (43%), Positives = 67/128 (53%), Gaps = 3/128 (2%)
Query 5 RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLS 64
++L+D S + RL+ E G V T +T LEVG+SA +R LS
Sbjct 414 KYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLM--VALS 471
Query 65 AMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIA 124
A + T RAL +Q LLA R RG IPDLLIAA E GL VLH D DFD IA
Sbjct 472 AFDLIESTASHHRRALGIQRLLAARSQ-RGRKIPDLLIAAAGEEHGLVVLHYDADFDLIA 530
Query 125 ALTGQKTE 132
A+TGQ +
Sbjct 531 AVTGQPCQ 538
>gi|167968774|ref|ZP_02551051.1| hypothetical protein MtubH3_12355 [Mycobacterium tuberculosis
H37Ra]
gi|253797151|ref|YP_003030152.1| toxin [Mycobacterium tuberculosis KZN 1435]
gi|308231499|ref|ZP_07412656.2| toxin [Mycobacterium tuberculosis SUMu001]
27 more sequence titles
Length=137
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/128 (43%), Positives = 67/128 (53%), Gaps = 3/128 (2%)
Query 5 RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLS 64
++L+D S + RL+ E G V T +T LEVG+SA +R LS
Sbjct 4 KYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLM--VALS 61
Query 65 AMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIA 124
A + T RAL +Q LLA R RG IPDLLIAA E GL VLH D DFD IA
Sbjct 62 AFDLIESTASHHRRALGIQRLLAARSQ-RGRKIPDLLIAAAGEEHGLVVLHYDADFDLIA 120
Query 125 ALTGQKTE 132
A+TGQ +
Sbjct 121 AVTGQPCQ 128
>gi|297163315|gb|ADI13027.1| PilT protein domain protein [Streptomyces bingchenggensis BCW-1]
Length=140
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/142 (39%), Positives = 74/142 (53%), Gaps = 16/142 (11%)
Query 4 QRWLIDKSALVRLTDSPDME-IWSNRIERGLVHITGVTRLEV----GFSAECGEIARR-- 56
+ +LID SA RL +P +E W+ ++ G V + +T LE+ G E + R
Sbjct 3 ESFLIDTSACNRLFRTPAVERHWATVLDEGRVTVCEITELELVRATGGRGEWAVLERYLH 62
Query 57 -EFREPPLSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLH 115
F PP+ P LT RA VQ LL H+GP DL+ AATAEL GLT+LH
Sbjct 63 DAFGWPPV---PDRALT-----RARHVQDLLVATSWHQGPRAVDLMTAATAELCGLTLLH 114
Query 116 VDKDFDAIAALTGQKTERLTHR 137
D DF+ IA +TGQ + + R
Sbjct 115 YDADFETIAKVTGQPHQWIAPR 136
>gi|302536099|ref|ZP_07288441.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302444994|gb|EFL16810.1| conserved hypothetical protein [Streptomyces sp. C]
Length=138
Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/125 (41%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
Query 5 RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLS 64
R+LIDKSAL R + G++ + G LEV +SA A R L
Sbjct 4 RFLIDKSALARYPKPAVRAVIDPLHVAGVLGVCGAVELEVLYSARSKGDADRV--RAGLG 61
Query 65 AMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIA 124
A + DRAL+VQ L G+ + S+PDL+IAATAE G TVLH D D+D IA
Sbjct 62 AFAWLSTPDEVWDRALDVQKQLIVAGNWKAVSLPDLVIAATAERHGATVLHYDGDYDMIA 121
Query 125 ALTGQ 129
+TGQ
Sbjct 122 EVTGQ 126
>gi|289445761|ref|ZP_06435505.1| toxin [Mycobacterium tuberculosis CPHL_A]
gi|289418719|gb|EFD15920.1| toxin [Mycobacterium tuberculosis CPHL_A]
Length=226
Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/128 (43%), Positives = 66/128 (52%), Gaps = 3/128 (2%)
Query 5 RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLS 64
++L+D S + RL+ E G V T +T LEVG+ A +R LS
Sbjct 93 KYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYPARNETEWQRLM--VALS 150
Query 65 AMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIA 124
A + T RAL +Q LLA R RG IPDLLIAA E GL VLH D DFD IA
Sbjct 151 AFDLIESTASHHRRALGIQRLLAARSQ-RGRKIPDLLIAAAGEEHGLVVLHYDADFDLIA 209
Query 125 ALTGQKTE 132
A+TGQ +
Sbjct 210 AVTGQPCQ 217
>gi|284991226|ref|YP_003409780.1| PilT protein domain-containing protein [Geodermatophilus obscurus
DSM 43160]
gi|284064471|gb|ADB75409.1| PilT protein domain protein [Geodermatophilus obscurus DSM 43160]
Length=141
Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/131 (40%), Positives = 70/131 (54%), Gaps = 7/131 (5%)
Query 5 RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLS 64
R+L+D SA R+ + + GL+ LE +SA + RE+RE
Sbjct 6 RYLLDTSAAARVPAPQVADRVVPLLSAGLLATCAALDLEALYSAR----SPREYREVRAD 61
Query 65 A-MPVEYLTPRIED--RALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFD 121
+ EYL D RAL+VQ LAD G RG + DL+I+A AE +TVLH D DFD
Sbjct 62 RRLAYEYLPTEDGDWQRALQVQAALADAGRWRGVGLADLVISAVAERHRVTVLHYDGDFD 121
Query 122 AIAALTGQKTE 132
+AA+TGQ+TE
Sbjct 122 GVAAVTGQRTE 132
>gi|289748705|ref|ZP_06508083.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium
tuberculosis T92]
gi|289689292|gb|EFD56721.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium
tuberculosis T92]
Length=126
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/103 (49%), Positives = 57/103 (56%), Gaps = 3/103 (2%)
Query 30 ERGLVHITGVTRLEVGFSAECGEIARREFREPPLSAMPVEYLTPRIEDRALEVQTLLADR 89
E G V T +T LEVG+SA +R LSA + T RAL +Q LLA R
Sbjct 18 EAGAVARTQITDLEVGYSARNETEWQRLMVA--LSAFDLIESTASHHRRALGIQRLLAAR 75
Query 90 GHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAALTGQKTE 132
RG IPDLLIAA E GL VLH D DFD IAA+TGQ +
Sbjct 76 SQ-RGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQ 117
>gi|328882585|emb|CCA55824.1| hypothetical protein SVEN_2538 [Streptomyces venezuelae ATCC
10712]
Length=138
Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/121 (41%), Positives = 61/121 (51%), Gaps = 4/121 (3%)
Query 6 WLIDKSALVRL-TDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLS 64
+L+D SA V L TD W IE G + + TR E+ FSA + RE E L+
Sbjct 4 YLVDTSAYVHLGTDPAAQRRWDAEIETGAIGMCEATRTELLFSAVNAD--DREAIEEDLA 61
Query 65 AMPVEYLTPRIEDRALE-VQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAI 123
AM P+ R +E Q L +G HR + DLLI ATA GLTVLH D DF +
Sbjct 62 AMFAPVRVPKDAWRWVESAQYKLTQKGQHRAAGVIDLLICATAVHHGLTVLHRDNDFATV 121
Query 124 A 124
A
Sbjct 122 A 122
>gi|271962881|ref|YP_003337077.1| hypothetical protein Sros_1339 [Streptosporangium roseum DSM
43021]
gi|270506056|gb|ACZ84334.1| hypothetical protein Sros_1339 [Streptosporangium roseum DSM
43021]
Length=99
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/56 (58%), Positives = 39/56 (70%), Gaps = 0/56 (0%)
Query 74 RIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAALTGQ 129
R DRA + Q LL +G RG DL++AATAEL GLT+LH D DFD +AA+TGQ
Sbjct 13 RAYDRAWQAQGLLTAKGQQRGAGPVDLVVAATAELRGLTLLHRDHDFDCVAAVTGQ 68
>gi|295840079|ref|ZP_06827012.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
sp. SPB74]
gi|197697029|gb|EDY43962.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
sp. SPB74]
Length=139
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/123 (38%), Positives = 60/123 (49%), Gaps = 2/123 (1%)
Query 5 RWLIDKSALVRLTDSPDM-EIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPL 63
+LID SA+VR SPD+ W + I RG V I E+ +SA+ R E +
Sbjct 3 NYLIDTSAVVRFFKSPDLFPAWKDCIVRGEVGIIPPIEFEICYSAQKAR-DRDELLQKLG 61
Query 64 SAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAI 123
TP D ++Q L G HR DLL+A TA + LTVLHVDKD+ +
Sbjct 62 LLFSAVTPTPAAYDAGRDMQEALTKHGAHRSCGPVDLLLAGTAHVESLTVLHVDKDYVTL 121
Query 124 AAL 126
A L
Sbjct 122 ARL 124
>gi|311897887|dbj|BAJ30295.1| hypothetical protein KSE_45120 [Kitasatospora setae KM-6054]
Length=135
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/130 (37%), Positives = 64/130 (50%), Gaps = 4/130 (3%)
Query 6 WLIDKSALVRLTDSPD-MEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLS 64
+L+D SAL L +P + W I G++H+ TR E +SA G R E + L
Sbjct 4 YLVDASALWHLFRTPGALRAWEGHIAAGVLHVCEPTRAEFLYSAT-GPAHRDELADE-LD 61
Query 65 AMPVEYLTPRIEDRALE-VQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAI 123
A+ P+ R ++ Q L RG HR DLL+ ATA LTVLHVD DF +
Sbjct 62 ALCGTAAVPKSAWRWVDSAQYRLTQRGLHRSAGAIDLLVCATAAHHDLTVLHVDNDFTTV 121
Query 124 AALTGQKTER 133
A++ ER
Sbjct 122 ASVVSDVRER 131
>gi|269124363|ref|YP_003297733.1| PilT protein domain-containing protein [Thermomonospora curvata
DSM 43183]
gi|268309321|gb|ACY95695.1| PilT protein domain protein [Thermomonospora curvata DSM 43183]
Length=136
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/133 (41%), Positives = 72/133 (55%), Gaps = 8/133 (6%)
Query 6 WLIDKSALVRLTDSPDM-EIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPPLS 64
+L D SA RL P + W +++ GLV + VT +E+ +SA + R++
Sbjct 6 FLADTSAFHRLDGIPAIARNWEDQLRAGLVSVCPVTEIEIFYSAR----SSRDYERVSAR 61
Query 65 AMPVEYLTP---RIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFD 121
V P R RALEVQ + +G HR + DLL+AATAE LTVLH DKDFD
Sbjct 62 LREVFGWVPVPERAFQRALEVQEAMLAQGTHRSAGLADLLLAATAEEYRLTVLHDDKDFD 121
Query 122 AIAALTGQKTERL 134
IAA+TGQ R+
Sbjct 122 CIAAVTGQPVRRV 134
>gi|302552928|ref|ZP_07305270.1| conserved hypothetical protein [Streptomyces viridochromogenes
DSM 40736]
gi|302470546|gb|EFL33639.1| conserved hypothetical protein [Streptomyces viridochromogenes
DSM 40736]
Length=136
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/136 (36%), Positives = 65/136 (48%), Gaps = 8/136 (5%)
Query 6 WLIDKSALVRLTDSPDMEI-WSNRIERGLVHITGVTRLEVGFSAECGEIARREFREPP-- 62
+L+D S LVRL P ++ W + I+ G + V R E +SA G RE+ E
Sbjct 3 YLLDTSGLVRLLRDPKLQTAWYDAIDAGAIASCYVQRAEFLYSARNG----REYDEIAEM 58
Query 63 LSAMPVEYLTPRIEDRALE-VQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFD 121
+ + + P+ R + VQ +A G HR S DL+IAATA GL VLH D D+
Sbjct 59 FTDIYPDAAVPKNAGRWISSVQHRMAQAGEHRSASAVDLVIAATAAHHGLAVLHDDADYR 118
Query 122 AIAALTGQKTERLTHR 137
AIA E H
Sbjct 119 AIARHASDLLEHNVHN 134
Lambda K H
0.319 0.136 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 130347035928
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40