BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0309
Length=218
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607450|ref|NP_214823.1| hypothetical protein Rv0309 [Mycoba... 445 2e-123
gi|289441689|ref|ZP_06431433.1| hypothetical exported protein [M... 444 5e-123
gi|308379744|ref|ZP_07487406.2| hypothetical exported protein [M... 399 2e-109
gi|240172741|ref|ZP_04751400.1| hypothetical protein MkanA1_2572... 396 1e-108
gi|118616937|ref|YP_905269.1| hypothetical protein MUL_1223 [Myc... 394 4e-108
gi|15828358|ref|NP_302621.1| hypothetical protein [Mycobacterium... 355 2e-96
gi|41409894|ref|NP_962730.1| hypothetical protein MAP3796 [Mycob... 348 4e-94
gi|336460244|gb|EGO39147.1| hypothetical protein MAPs_42720 [Myc... 347 5e-94
gi|342859215|ref|ZP_08715869.1| hypothetical protein MCOL_10063 ... 342 2e-92
gi|254821592|ref|ZP_05226593.1| hypothetical protein MintA_16782... 333 7e-90
gi|296167654|ref|ZP_06849925.1| conserved hypothetical protein [... 332 2e-89
gi|333988947|ref|YP_004521561.1| hypothetical protein JDM601_030... 332 2e-89
gi|118463717|ref|YP_883976.1| hypothetical protein MAV_4853 [Myc... 331 5e-89
gi|126432998|ref|YP_001068689.1| hypothetical protein Mjls_0385 ... 303 1e-80
gi|108797377|ref|YP_637574.1| hypothetical protein Mmcs_0397 [My... 301 3e-80
gi|118473185|ref|YP_885045.1| hypothetical protein MSMEG_0635 [M... 299 2e-79
gi|333991934|ref|YP_004524548.1| hypothetical protein JDM601_329... 291 4e-77
gi|120401456|ref|YP_951285.1| hypothetical protein Mvan_0431 [My... 272 2e-71
gi|169631377|ref|YP_001705026.1| hypothetical protein MAB_4299c ... 270 1e-70
gi|315442115|ref|YP_004074994.1| hypothetical protein Mspyr1_044... 263 1e-68
gi|145220914|ref|YP_001131592.1| hypothetical protein Mflv_0310 ... 263 1e-68
gi|169631376|ref|YP_001705025.1| hypothetical protein MAB_4298c ... 203 2e-50
gi|296392839|ref|YP_003657723.1| ErfK/YbiS/YcfS/YnhG family prot... 198 5e-49
gi|296392840|ref|YP_003657724.1| ErfK/YbiS/YcfS/YnhG family prot... 191 6e-47
gi|317507771|ref|ZP_07965474.1| hypothetical protein HMPREF9336_... 178 4e-43
gi|296392838|ref|YP_003657722.1| ErfK/YbiS/YcfS/YnhG family prot... 176 2e-42
gi|317507770|ref|ZP_07965473.1| ykud domain-containing protein [... 172 3e-41
gi|317507772|ref|ZP_07965475.1| hypothetical protein HMPREF9336_... 170 1e-40
gi|296141352|ref|YP_003648595.1| hypothetical protein Tpau_3678 ... 120 2e-25
gi|256376866|ref|YP_003100526.1| ErfK/YbiS/YcfS/YnhG family prot... 117 9e-25
gi|302529176|ref|ZP_07281518.1| predicted protein [Streptomyces ... 113 2e-23
gi|237733367|ref|ZP_04563848.1| conserved hypothetical protein [... 111 6e-23
gi|229009442|ref|ZP_04166698.1| S-layer y and secreted protein w... 111 6e-23
gi|225863019|ref|YP_002748397.1| S-layer domain protein [Bacillu... 111 7e-23
gi|301052709|ref|YP_003790920.1| S-layer-like protein and secret... 111 9e-23
gi|228990084|ref|ZP_04150056.1| Cell wall binding repeat protein... 111 9e-23
gi|111022861|ref|YP_705833.1| hypothetical protein RHA1_ro05898 ... 110 1e-22
gi|326381844|ref|ZP_08203537.1| ErfK/YbiS/YcfS/YnhG family prote... 110 2e-22
gi|229000548|ref|ZP_04160091.1| S-layer y and secreted protein w... 108 4e-22
gi|337763532|emb|CCB72240.1| Secreted protein (fragment) [Strept... 107 9e-22
gi|343925106|ref|ZP_08764638.1| hypothetical protein GOALK_033_0... 107 2e-21
gi|324325189|gb|ADY20449.1| S-layer domain protein [Bacillus thu... 106 3e-21
gi|345446893|gb|AEN91910.1| S-layer y and secreted protein with ... 105 7e-21
gi|295702401|ref|YP_003595476.1| SH3 domain-containing protein [... 104 8e-21
gi|226365369|ref|YP_002783152.1| hypothetical protein ROP_59600 ... 104 1e-20
gi|229010464|ref|ZP_04167667.1| S-layer y and secreted protein w... 104 1e-20
gi|52144249|ref|YP_082577.1| GW repeat-containing protein [Bacil... 104 1e-20
gi|294497036|ref|YP_003560736.1| SH3 domain-containing protein [... 103 2e-20
gi|262201622|ref|YP_003272830.1| ErfK/YbiS/YcfS/YnhG family prot... 98.6 6e-19
gi|160937044|ref|ZP_02084407.1| hypothetical protein CLOBOL_0193... 95.1 6e-18
>gi|15607450|ref|NP_214823.1| hypothetical protein Rv0309 [Mycobacterium tuberculosis H37Rv]
gi|15839693|ref|NP_334730.1| hypothetical protein MT0322 [Mycobacterium tuberculosis CDC1551]
gi|31791488|ref|NP_853981.1| hypothetical protein Mb0317 [Mycobacterium bovis AF2122/97]
68 more sequence titles
Length=218
Score = 445 bits (1145), Expect = 2e-123, Method: Compositional matrix adjust.
Identities = 218/218 (100%), Positives = 218/218 (100%), Gaps = 0/218 (0%)
Query 1 MSRLLALLCAAVCTGCVAVVLAPVSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQ 60
MSRLLALLCAAVCTGCVAVVLAPVSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQ
Sbjct 1 MSRLLALLCAAVCTGCVAVVLAPVSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQ 60
Query 61 RTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVG 120
RTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVG
Sbjct 61 RTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVG 120
Query 121 PNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSAF 180
PNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSAF
Sbjct 121 PNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSAF 180
Query 181 FFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK 218
FFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK
Sbjct 181 FFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK 218
>gi|289441689|ref|ZP_06431433.1| hypothetical exported protein [Mycobacterium tuberculosis T46]
gi|289568221|ref|ZP_06448448.1| hypothetical exported protein [Mycobacterium tuberculosis T17]
gi|289748792|ref|ZP_06508170.1| hypothetical exported protein [Mycobacterium tuberculosis T92]
gi|289752340|ref|ZP_06511718.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289414608|gb|EFD11848.1| hypothetical exported protein [Mycobacterium tuberculosis T46]
gi|289541974|gb|EFD45623.1| hypothetical exported protein [Mycobacterium tuberculosis T17]
gi|289689379|gb|EFD56808.1| hypothetical exported protein [Mycobacterium tuberculosis T92]
gi|289692927|gb|EFD60356.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=218
Score = 444 bits (1141), Expect = 5e-123, Method: Compositional matrix adjust.
Identities = 217/218 (99%), Positives = 218/218 (100%), Gaps = 0/218 (0%)
Query 1 MSRLLALLCAAVCTGCVAVVLAPVSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQ 60
MSRLLALLCAAVCTGCVAVVLAPVSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQ
Sbjct 1 MSRLLALLCAAVCTGCVAVVLAPVSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQ 60
Query 61 RTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVG 120
RTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVG
Sbjct 61 RTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVG 120
Query 121 PNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSAF 180
PNHWWSGDDNSPTFNSMQVCQK+QCPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSAF
Sbjct 121 PNHWWSGDDNSPTFNSMQVCQKAQCPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSAF 180
Query 181 FFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK 218
FFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK
Sbjct 181 FFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK 218
>gi|308379744|ref|ZP_07487406.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu011]
gi|308363805|gb|EFP52656.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu011]
gi|339293366|gb|AEJ45477.1| hypothetical protein CCDC5079_0287 [Mycobacterium tuberculosis
CCDC5079]
gi|339297011|gb|AEJ49121.1| hypothetical protein CCDC5180_0284 [Mycobacterium tuberculosis
CCDC5180]
Length=195
Score = 399 bits (1025), Expect = 2e-109, Method: Compositional matrix adjust.
Identities = 194/195 (99%), Positives = 195/195 (100%), Gaps = 0/195 (0%)
Query 24 VSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQRTAAGWQPLKTGITTHIGSAGMA 83
+SLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQRTAAGWQPLKTGITTHIGSAGMA
Sbjct 1 MSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQRTAAGWQPLKTGITTHIGSAGMA 60
Query 84 PEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKS 143
PEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKS
Sbjct 61 PEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKS 120
Query 144 QCPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQ 203
QCPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQ
Sbjct 121 QCPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQ 180
Query 204 IIRWLRPGAVIAIAK 218
IIRWLRPGAVIAIAK
Sbjct 181 IIRWLRPGAVIAIAK 195
>gi|240172741|ref|ZP_04751400.1| hypothetical protein MkanA1_25727 [Mycobacterium kansasii ATCC
12478]
Length=218
Score = 396 bits (1018), Expect = 1e-108, Method: Compositional matrix adjust.
Identities = 192/218 (89%), Positives = 204/218 (94%), Gaps = 0/218 (0%)
Query 1 MSRLLALLCAAVCTGCVAVVLAPVSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQ 60
M RL A+LCAAVC A+ LAPV++A NPWFANSVGNATQVVSVV TGGS AKMDVYQ
Sbjct 1 MHRLGAVLCAAVCLAGAALGLAPVTVAAGNPWFANSVGNATQVVSVVSTGGSNAKMDVYQ 60
Query 61 RTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVG 120
RTAAGWQPLKTGI TH+GSAGMAP+AKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVG
Sbjct 61 RTAAGWQPLKTGIPTHVGSAGMAPQAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVG 120
Query 121 PNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSAF 180
PNHWWSGDD+SPTFN+MQVCQK+QCPF+TA+SENLQIPQYKHSVVMGVNK KVPG G+AF
Sbjct 121 PNHWWSGDDHSPTFNTMQVCQKAQCPFNTAESENLQIPQYKHSVVMGVNKNKVPGGGAAF 180
Query 181 FFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK 218
FFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK
Sbjct 181 FFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK 218
>gi|118616937|ref|YP_905269.1| hypothetical protein MUL_1223 [Mycobacterium ulcerans Agy99]
gi|183980587|ref|YP_001848878.1| hypothetical protein MMAR_0559 [Mycobacterium marinum M]
gi|118569047|gb|ABL03798.1| conserved exported protein [Mycobacterium ulcerans Agy99]
gi|183173913|gb|ACC39023.1| conserved exported protein [Mycobacterium marinum M]
Length=218
Score = 394 bits (1012), Expect = 4e-108, Method: Compositional matrix adjust.
Identities = 193/218 (89%), Positives = 201/218 (93%), Gaps = 0/218 (0%)
Query 1 MSRLLALLCAAVCTGCVAVVLAPVSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQ 60
M RL+A+L A VCT VAV LAPV+ A NPWFANSVGNATQVVSVV TGGS AKMD+YQ
Sbjct 1 MRRLVAVLFAGVCTVGVAVGLAPVTAAAGNPWFANSVGNATQVVSVVSTGGSNAKMDIYQ 60
Query 61 RTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVG 120
RT AGWQPLK GITTH+GSAGMAP+AKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVG
Sbjct 61 RTTAGWQPLKAGITTHVGSAGMAPKAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVG 120
Query 121 PNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSAF 180
PNHWWSGDDNSPTFNSMQVC+KS CPFST+ SENLQIPQYKHSVVMGVNK KVPG GSAF
Sbjct 121 PNHWWSGDDNSPTFNSMQVCKKSDCPFSTSASENLQIPQYKHSVVMGVNKNKVPGGGSAF 180
Query 181 FFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK 218
FFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK
Sbjct 181 FFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK 218
>gi|15828358|ref|NP_302621.1| hypothetical protein [Mycobacterium leprae TN]
gi|221230835|ref|YP_002504251.1| putative secreted protein [Mycobacterium leprae Br4923]
gi|13093788|emb|CAC32053.1| putative secreted protein [Mycobacterium leprae]
gi|219933942|emb|CAR72621.1| putative secreted protein [Mycobacterium leprae Br4923]
Length=218
Score = 355 bits (912), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 170/218 (78%), Positives = 185/218 (85%), Gaps = 0/218 (0%)
Query 1 MSRLLALLCAAVCTGCVAVVLAPVSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQ 60
M RL+ALL A VC ++LAP+ A WFAN VGNATQVVSVV TGGS AKMD+YQ
Sbjct 1 MCRLIALLSAVVCAAWATLILAPIGAAAGAAWFANKVGNATQVVSVVSTGGSNAKMDIYQ 60
Query 61 RTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVG 120
RT GWQPLKTGI T++GSAG+ +AKSGYPATPMGVYSLDSAFGTAPNPG LPYTQVG
Sbjct 61 RTGTGWQPLKTGIPTYVGSAGLVAQAKSGYPATPMGVYSLDSAFGTAPNPGSQLPYTQVG 120
Query 121 PNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSAF 180
PNHWWSGDD+SPTFN+MQVCQKS C F+TA+SENLQIP YKH+VVMGVNKAKVPG GSAF
Sbjct 121 PNHWWSGDDHSPTFNTMQVCQKSHCRFNTAESENLQIPSYKHAVVMGVNKAKVPGSGSAF 180
Query 181 FFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK 218
F HTT GGPT GCVAIDD TLVQI+RWLRPGAVIAI K
Sbjct 181 FLHTTGGGPTEGCVAIDDVTLVQILRWLRPGAVIAITK 218
>gi|41409894|ref|NP_962730.1| hypothetical protein MAP3796 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|254777293|ref|ZP_05218809.1| hypothetical protein MaviaA2_21851 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41398727|gb|AAS06346.1| hypothetical protein MAP_3796 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=219
Score = 348 bits (892), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 166/219 (76%), Positives = 188/219 (86%), Gaps = 1/219 (0%)
Query 1 MSRLLALLCAAVCTGCVAVVLAPVSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQ 60
M RLL LCAA C +VVL+P+S A PWFAN+VGNATQVVSVV TGGS A M+++Q
Sbjct 1 MHRLLTSLCAAACVIVASVVLSPISAAAGAPWFANAVGNATQVVSVVSTGGSNATMEIFQ 60
Query 61 RTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQ-V 119
RT GWQ L++G+ TH+GSAGMAP+AKSG PATPMGVYSLDSAFGTAPNPG GLPYTQ V
Sbjct 61 RTGTGWQSLRSGVPTHVGSAGMAPQAKSGVPATPMGVYSLDSAFGTAPNPGTGLPYTQIV 120
Query 120 GPNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSA 179
GPN+WWSGDD+SPTFNSMQVC K+QCPF+TA+SENLQIPQYKH+VVMGVNK K PG G+A
Sbjct 121 GPNYWWSGDDHSPTFNSMQVCPKAQCPFNTAESENLQIPQYKHAVVMGVNKNKTPGGGAA 180
Query 180 FFFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK 218
FFFHTTDG PT GCVA+DDA LV I++WLRPGAVIAI K
Sbjct 181 FFFHTTDGKPTEGCVAVDDAQLVSIMKWLRPGAVIAITK 219
>gi|336460244|gb|EGO39147.1| hypothetical protein MAPs_42720 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=222
Score = 347 bits (891), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 166/219 (76%), Positives = 188/219 (86%), Gaps = 1/219 (0%)
Query 1 MSRLLALLCAAVCTGCVAVVLAPVSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQ 60
M RLL LCAA C +VVL+P+S A PWFAN+VGNATQVVSVV TGGS A M+++Q
Sbjct 4 MHRLLTSLCAAACVIVASVVLSPISAAAGAPWFANAVGNATQVVSVVSTGGSNATMEIFQ 63
Query 61 RTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQ-V 119
RT GWQ L++G+ TH+GSAGMAP+AKSG PATPMGVYSLDSAFGTAPNPG GLPYTQ V
Sbjct 64 RTGTGWQSLRSGVPTHVGSAGMAPQAKSGVPATPMGVYSLDSAFGTAPNPGTGLPYTQIV 123
Query 120 GPNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSA 179
GPN+WWSGDD+SPTFNSMQVC K+QCPF+TA+SENLQIPQYKH+VVMGVNK K PG G+A
Sbjct 124 GPNYWWSGDDHSPTFNSMQVCPKAQCPFNTAESENLQIPQYKHAVVMGVNKNKTPGGGAA 183
Query 180 FFFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK 218
FFFHTTDG PT GCVA+DDA LV I++WLRPGAVIAI K
Sbjct 184 FFFHTTDGKPTEGCVAVDDAQLVSIMKWLRPGAVIAITK 222
>gi|342859215|ref|ZP_08715869.1| hypothetical protein MCOL_10063 [Mycobacterium colombiense CECT
3035]
gi|342133456|gb|EGT86659.1| hypothetical protein MCOL_10063 [Mycobacterium colombiense CECT
3035]
Length=219
Score = 342 bits (878), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 166/219 (76%), Positives = 185/219 (85%), Gaps = 1/219 (0%)
Query 1 MSRLLALLCAAVCTGCVAVVLAPVSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQ 60
M RLL CAA +VVLAP+S A PWFAN+VGNATQVVSVV TGGS A M+++Q
Sbjct 1 MHRLLTSWCAAAGVIFASVVLAPISAAAGAPWFANAVGNATQVVSVVSTGGSNATMEIFQ 60
Query 61 RTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQV- 119
RT GWQ L++ I TH+GSAGMAP+AKSG PATPMGVYSLDSAFGTAPNPG GLPYTQV
Sbjct 61 RTGTGWQSLRSNIPTHVGSAGMAPQAKSGVPATPMGVYSLDSAFGTAPNPGTGLPYTQVS 120
Query 120 GPNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSA 179
GPN+WWSGDD+SPTFNSMQVCQK+QCPF+T DSENLQIPQYKH+VVMGVNK K PG G+A
Sbjct 121 GPNYWWSGDDHSPTFNSMQVCQKAQCPFNTGDSENLQIPQYKHAVVMGVNKNKTPGGGAA 180
Query 180 FFFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK 218
FFFHTTDG PT GCVA+DDA LV I++WLRPGAVIAI K
Sbjct 181 FFFHTTDGKPTEGCVAVDDAQLVSIMKWLRPGAVIAITK 219
>gi|254821592|ref|ZP_05226593.1| hypothetical protein MintA_16782 [Mycobacterium intracellulare
ATCC 13950]
Length=219
Score = 333 bits (855), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 165/219 (76%), Positives = 186/219 (85%), Gaps = 1/219 (0%)
Query 1 MSRLLALLCAAVCTGCVAVVLAPVSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQ 60
M RLL LCAA C +VVLAP+ A PWFAN+VGNATQVVSVV TGGS A M+V+Q
Sbjct 1 MHRLLTSLCAAACVIFASVVLAPIGAAAGAPWFANAVGNATQVVSVVSTGGSNATMEVFQ 60
Query 61 RTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQV- 119
RT GWQ L++GI TH+GSAGMAP+AKSG PATPMGVY+LDSAFGTAPNPG GLPYTQ+
Sbjct 61 RTGTGWQSLRSGIPTHVGSAGMAPQAKSGVPATPMGVYTLDSAFGTAPNPGTGLPYTQIT 120
Query 120 GPNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSA 179
G N+WWSGDD+S TFNSMQVCQK+QCPF+TA+SENLQIPQYKH+VVMGVNK K PG G+A
Sbjct 121 GGNYWWSGDDHSATFNSMQVCQKAQCPFNTAESENLQIPQYKHAVVMGVNKNKTPGGGAA 180
Query 180 FFFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK 218
FFFHTTDG PT GCVA+DDA LV I++WLRPGAVIAI K
Sbjct 181 FFFHTTDGKPTEGCVAVDDAQLVSIMKWLRPGAVIAITK 219
>gi|296167654|ref|ZP_06849925.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897121|gb|EFG76733.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=230
Score = 332 bits (852), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/218 (78%), Positives = 189/218 (87%), Gaps = 0/218 (0%)
Query 1 MSRLLALLCAAVCTGCVAVVLAPVSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQ 60
M RLLA L A+ C ++ LAP + A PWFAN+VGNATQVVSV+ TGGS A MD+YQ
Sbjct 13 MRRLLASLSASACALFASLALAPAAGAAGAPWFANAVGNATQVVSVMSTGGSNATMDIYQ 72
Query 61 RTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVG 120
RTAAGWQ L+TGI TH+GSAGMAP+AKSG PATPMGVY+LDSAFGTAPNPG GLPYTQVG
Sbjct 73 RTAAGWQALRTGIPTHVGSAGMAPQAKSGVPATPMGVYTLDSAFGTAPNPGSGLPYTQVG 132
Query 121 PNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSAF 180
PNHWWSGDD+SPTFNSMQVCQK+QCPF+TA+SENLQIPQYKH+VVMGVNK K PG G+AF
Sbjct 133 PNHWWSGDDHSPTFNSMQVCQKAQCPFNTAESENLQIPQYKHAVVMGVNKNKTPGGGAAF 192
Query 181 FFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK 218
FFHTTDG PT GCVA+DDA LV I++WLRPGAVIAI K
Sbjct 193 FFHTTDGKPTEGCVAVDDAQLVSIMKWLRPGAVIAITK 230
>gi|333988947|ref|YP_004521561.1| hypothetical protein JDM601_0307 [Mycobacterium sp. JDM601]
gi|333484915|gb|AEF34307.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=218
Score = 332 bits (851), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 163/218 (75%), Positives = 186/218 (86%), Gaps = 0/218 (0%)
Query 1 MSRLLALLCAAVCTGCVAVVLAPVSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQ 60
M RLL++ CAA+CT A+V AP + A V PWFA SVGNA QV+SVVG GGS AKMDVYQ
Sbjct 1 MRRLLSVFCAALCTAATALVAAPGAQADVTPWFARSVGNAAQVISVVGVGGSDAKMDVYQ 60
Query 61 RTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVG 120
R+A GWQP+ GI H+GSAGMA +AKSGYPATPMGV++L AFGTAPNPGGGL Y QVG
Sbjct 61 RSATGWQPVAAGIPAHVGSAGMAQQAKSGYPATPMGVFTLPYAFGTAPNPGGGLQYVQVG 120
Query 121 PNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSAF 180
P+HWW GDD+SPTFN+MQVC+K QCPF T +SENLQIPQYKH+VVMGVN A+ PG G+AF
Sbjct 121 PDHWWDGDDHSPTFNTMQVCKKQQCPFDTGESENLQIPQYKHAVVMGVNTARTPGDGAAF 180
Query 181 FFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK 218
FFHTTDGGPTAGCVAIDDA LVQII+WLRPGAV+AIA+
Sbjct 181 FFHTTDGGPTAGCVAIDDAKLVQIIQWLRPGAVMAIAQ 218
>gi|118463717|ref|YP_883976.1| hypothetical protein MAV_4853 [Mycobacterium avium 104]
gi|118165004|gb|ABK65901.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=206
Score = 331 bits (848), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 157/202 (78%), Positives = 179/202 (89%), Gaps = 1/202 (0%)
Query 18 AVVLAPVSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQRTAAGWQPLKTGITTHI 77
+VVL+P+S A PWFAN+VGNATQVVSVV TGGS A M+++QRT GWQ L++G+ TH+
Sbjct 5 SVVLSPISAAAGAPWFANAVGNATQVVSVVSTGGSNATMEIFQRTGTGWQSLRSGVPTHV 64
Query 78 GSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQ-VGPNHWWSGDDNSPTFNS 136
GSAGMAP+AKSG PATPMGVYSLDSAFGTAPNPG GLPYTQ VGPN+WWSGDD+SPTFNS
Sbjct 65 GSAGMAPQAKSGVPATPMGVYSLDSAFGTAPNPGTGLPYTQIVGPNYWWSGDDHSPTFNS 124
Query 137 MQVCQKSQCPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAI 196
MQVC K+QCPF+TA+SENLQIPQYKH+VVMGVNK K PG G+AFFFHTTDG PT GCVA+
Sbjct 125 MQVCPKAQCPFNTAESENLQIPQYKHAVVMGVNKNKTPGGGAAFFFHTTDGKPTEGCVAV 184
Query 197 DDATLVQIIRWLRPGAVIAIAK 218
DDA LV I++WLRPGAVIAI K
Sbjct 185 DDAQLVSIMKWLRPGAVIAITK 206
>gi|126432998|ref|YP_001068689.1| hypothetical protein Mjls_0385 [Mycobacterium sp. JLS]
gi|126232798|gb|ABN96198.1| putative conserved exported protein [Mycobacterium sp. JLS]
Length=217
Score = 303 bits (775), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/222 (69%), Positives = 175/222 (79%), Gaps = 9/222 (4%)
Query 1 MSRLLALLCAA-VCTGCVAVVLAPVSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVY 59
M RLL LLCAA VC V APV+ A PWFA+SVG ATQV+SVVG GGS+AKMDVY
Sbjct 1 MRRLLTLLCAAAVCL----VAGAPVAPATA-PWFASSVGPATQVISVVGVGGSSAKMDVY 55
Query 60 QRTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQV 119
QRTA GWQP+ GI IG+ GMAP+ G TPMGV++LD AFGT PNPGGGLPY QV
Sbjct 56 QRTAVGWQPVAAGIPAFIGAKGMAPQTHDGEMKTPMGVFTLDFAFGTEPNPGGGLPYVQV 115
Query 120 GPNHWWSGDDNSPTFNSMQVCQKSQCPFST---ADSENLQIPQYKHSVVMGVNKAKVPGK 176
GP+HWW GD SPT+N+MQVC+K QC F+T A +ENL IPQY+H+VVMGVNKA+VPG
Sbjct 116 GPDHWWDGDMKSPTYNTMQVCKKEQCRFNTSLSAGTENLDIPQYRHAVVMGVNKARVPGN 175
Query 177 GSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK 218
G AFF H+TDGGPTAGCVAIDD LV+I+RWLRPGA+IA++K
Sbjct 176 GGAFFVHSTDGGPTAGCVAIDDGRLVEIMRWLRPGALIAVSK 217
>gi|108797377|ref|YP_637574.1| hypothetical protein Mmcs_0397 [Mycobacterium sp. MCS]
gi|119866461|ref|YP_936413.1| hypothetical protein Mkms_0406 [Mycobacterium sp. KMS]
gi|108767796|gb|ABG06518.1| putative conserved exported protein [Mycobacterium sp. MCS]
gi|119692550|gb|ABL89623.1| putative conserved exported protein [Mycobacterium sp. KMS]
Length=217
Score = 301 bits (772), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 150/222 (68%), Positives = 175/222 (79%), Gaps = 9/222 (4%)
Query 1 MSRLLALLCAA-VCTGCVAVVLAPVSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVY 59
M RLL LLCAA VC V APV+ A PWFA+SVG ATQV+SVVG GGS+AKMDVY
Sbjct 1 MRRLLTLLCAAAVCL----VAGAPVAPATA-PWFASSVGAATQVISVVGVGGSSAKMDVY 55
Query 60 QRTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQV 119
QRTA GWQP+ GI IG+ GMAP+ G TPMGV++LD AFGT PNPGGGLPY QV
Sbjct 56 QRTAVGWQPVAAGIPAFIGAKGMAPQTHDGEMKTPMGVFTLDFAFGTEPNPGGGLPYVQV 115
Query 120 GPNHWWSGDDNSPTFNSMQVCQKSQCPFST---ADSENLQIPQYKHSVVMGVNKAKVPGK 176
GP+HWW GD SPT+N+MQVC+K QC F+T A +ENL IPQY+H+VVMGVNKA+VPG
Sbjct 116 GPDHWWDGDMKSPTYNTMQVCKKEQCRFNTSLSAGTENLDIPQYRHAVVMGVNKARVPGN 175
Query 177 GSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK 218
G AFF H+TDGGPTAGCVAIDD TLV+++RWLR GA+IA++K
Sbjct 176 GGAFFVHSTDGGPTAGCVAIDDGTLVEVMRWLRSGALIALSK 217
>gi|118473185|ref|YP_885045.1| hypothetical protein MSMEG_0635 [Mycobacterium smegmatis str.
MC2 155]
gi|118174472|gb|ABK75368.1| putative conserved exported protein [Mycobacterium smegmatis
str. MC2 155]
Length=208
Score = 299 bits (766), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 142/194 (74%), Positives = 161/194 (83%), Gaps = 3/194 (1%)
Query 28 VVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQRTAAGWQPLKTGITTHIGSAGMAPEAK 87
V NPWFA SVG ATQV+SVVG GGS AKMDVYQRTAAGWQP+ GI IG+ GMAP+
Sbjct 15 VENPWFARSVGTATQVISVVGVGGSKAKMDVYQRTAAGWQPVGVGIEAWIGANGMAPQTH 74
Query 88 SGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPF 147
G TPMG+++LD AFGTAPNPGGGL Y QVGP+HWW GD SPT+N+MQVC+K+QCPF
Sbjct 75 DGEMKTPMGIFTLDFAFGTAPNPGGGLKYVQVGPDHWWDGDMKSPTYNTMQVCKKAQCPF 134
Query 148 ST---ADSENLQIPQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQI 204
T + +ENL IPQY+H+VVMGVNKA+VPG G AFF H TDGGPTAGCVAIDDATLVQI
Sbjct 135 DTDPRSGTENLNIPQYRHAVVMGVNKARVPGNGGAFFVHNTDGGPTAGCVAIDDATLVQI 194
Query 205 IRWLRPGAVIAIAK 218
IRWLRPGA+IA+AK
Sbjct 195 IRWLRPGALIAVAK 208
>gi|333991934|ref|YP_004524548.1| hypothetical protein JDM601_3294 [Mycobacterium sp. JDM601]
gi|333487902|gb|AEF37294.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=242
Score = 291 bits (746), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/205 (71%), Positives = 170/205 (83%), Gaps = 3/205 (1%)
Query 17 VAVVLAPVSLAVVNPWFANSVG---NATQVVSVVGTGGSTAKMDVYQRTAAGWQPLKTGI 73
V V AP + AVV+PWFAN+VG ATQVVSVVG G STAK+DVYQRT AGW+P+ GI
Sbjct 38 VTAVTAPPTAAVVDPWFANAVGFPVAATQVVSVVGVGHSTAKVDVYQRTPAGWEPVAAGI 97
Query 74 TTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPT 133
H+GSAG+ P K G P+TPMG Y+LDSAFGTAP+PGGGLPY QVG +HWW D SPT
Sbjct 98 PAHVGSAGITPRTKEGEPSTPMGFYTLDSAFGTAPSPGGGLPYVQVGSDHWWDSDSKSPT 157
Query 134 FNSMQVCQKSQCPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGC 193
+N+MQ+C+K+QCPF T SENL IPQY+H+VV+GVNK++ PG GSA+FFHTTDGGPTAGC
Sbjct 158 YNTMQICKKAQCPFDTTASENLNIPQYRHAVVIGVNKSRTPGDGSAYFFHTTDGGPTAGC 217
Query 194 VAIDDATLVQIIRWLRPGAVIAIAK 218
VAIDDATLV+II WLRPGAV+AIAK
Sbjct 218 VAIDDATLVKIIGWLRPGAVMAIAK 242
>gi|120401456|ref|YP_951285.1| hypothetical protein Mvan_0431 [Mycobacterium vanbaalenii PYR-1]
gi|119954274|gb|ABM11279.1| putative conserved exported protein [Mycobacterium vanbaalenii
PYR-1]
Length=230
Score = 272 bits (696), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/198 (67%), Positives = 154/198 (78%), Gaps = 5/198 (2%)
Query 26 LAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQRTAAGWQPLK--TGITTHIGSAGMA 83
+A +PWFANSVG ATQV++V GTGGS AK+DV++RTAAGWQP+ GI IG GM+
Sbjct 33 VADFSPWFANSVGPATQVLAVTGTGGSDAKLDVWERTAAGWQPVAGGVGIPAKIGEKGMS 92
Query 84 PEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKS 143
P G TP G+Y+LD AFGT PNPGGGL Y QVGPNHWW GD SPT+N+MQVC K
Sbjct 93 PNHFDGSMMTPKGIYTLDFAFGTQPNPGGGLKYVQVGPNHWWDGDMKSPTYNTMQVCDKE 152
Query 144 QCPFST---ADSENLQIPQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDAT 200
CPF+T A +ENL IPQY H+VVMGVNK ++PGKG AFF H+TDGG TAGCVAIDDAT
Sbjct 153 NCPFNTSLSAGTENLDIPQYAHAVVMGVNKERIPGKGGAFFVHSTDGGATAGCVAIDDAT 212
Query 201 LVQIIRWLRPGAVIAIAK 218
LV I+RWLRPGA+IAI +
Sbjct 213 LVTIMRWLRPGAMIAITE 230
>gi|169631377|ref|YP_001705026.1| hypothetical protein MAB_4299c [Mycobacterium abscessus ATCC
19977]
gi|169243344|emb|CAM64372.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=218
Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/186 (70%), Positives = 150/186 (81%), Gaps = 0/186 (0%)
Query 31 PWFANSVGNATQVVSVVGTGGSTAKMDVYQRTAAGWQPLKTGITTHIGSAGMAPEAKSGY 90
PWFA SVGNATQV++V G GGS AK+DV+QR + WQ + TGI H+GSAG +AK G
Sbjct 31 PWFAQSVGNATQVIAVNGAGGSNAKIDVFQRNGSQWQTVSTGIPAHVGSAGFIDKAKEGA 90
Query 91 PATPMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTA 150
ATP GVYSLD AFGTAP P GL Y QVGPN WW GD NSPT+N+ Q C K++CPF+TA
Sbjct 91 SATPNGVYSLDWAFGTAPPPPSGLRYLQVGPNDWWDGDSNSPTYNTHQQCAKAECPFNTA 150
Query 151 DSENLQIPQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRP 210
SENL IPQYKH++VMGVNK +VPG GSAFF H+TDGGPTAGCV++DDATLV++I WLRP
Sbjct 151 QSENLPIPQYKHAIVMGVNKDRVPGGGSAFFVHSTDGGPTAGCVSLDDATLVKLIGWLRP 210
Query 211 GAVIAI 216
GAVIAI
Sbjct 211 GAVIAI 216
>gi|315442115|ref|YP_004074994.1| hypothetical protein Mspyr1_04470 [Mycobacterium sp. Spyr1]
gi|315260418|gb|ADT97159.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length=219
Score = 263 bits (672), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/222 (60%), Positives = 161/222 (73%), Gaps = 8/222 (3%)
Query 1 MSRLLALLCAAVCTGCVAVVLAPVSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQ 60
+ RL LLCA G ++ AP + A PWFANSVG ATQV++V G GGS AK+DV+Q
Sbjct 2 LRRLSTLLCAIAVAG---LLTAPHAGAFA-PWFANSVGAATQVLAVTGAGGSDAKLDVWQ 57
Query 61 RTAAGWQPLK--TGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQ 118
RT AGW+P+ GI +G+ G++P G TP GVYSLD AFGT P+PG GL Y Q
Sbjct 58 RTPAGWKPVDGGVGIAAKVGAKGLSPNHFEGSMMTPTGVYSLDFAFGTRPDPGSGLKYVQ 117
Query 119 VGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTADS--ENLQIPQYKHSVVMGVNKAKVPGK 176
VG NHWW GD SPT+N+MQVC + C F+T+ + ENL IPQY H+VVMGVNK ++PGK
Sbjct 118 VGSNHWWDGDVASPTYNTMQVCDRQNCRFATSGTGTENLNIPQYAHAVVMGVNKERIPGK 177
Query 177 GSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK 218
GSAFF H++ G TAGCVAIDDATLV I+RWLRPGAVIAIA+
Sbjct 178 GSAFFLHSSTGDATAGCVAIDDATLVTIMRWLRPGAVIAIAE 219
>gi|145220914|ref|YP_001131592.1| hypothetical protein Mflv_0310 [Mycobacterium gilvum PYR-GCK]
gi|145213400|gb|ABP42804.1| putative conserved exported protein [Mycobacterium gilvum PYR-GCK]
Length=221
Score = 263 bits (672), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/222 (60%), Positives = 161/222 (73%), Gaps = 8/222 (3%)
Query 1 MSRLLALLCAAVCTGCVAVVLAPVSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQ 60
+ RL LLCA G ++ AP + A PWFANSVG ATQV++V G GGS AK+DV+Q
Sbjct 4 LRRLSTLLCAIAVAG---LLTAPHAGAFA-PWFANSVGAATQVLAVTGAGGSDAKLDVWQ 59
Query 61 RTAAGWQPLK--TGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQ 118
RT AGW+P+ GI +G+ G++P G TP GVYSLD AFGT P+PG GL Y Q
Sbjct 60 RTPAGWKPVDGGVGIAAKVGAKGLSPNHFEGSMMTPTGVYSLDFAFGTRPDPGSGLKYVQ 119
Query 119 VGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTADS--ENLQIPQYKHSVVMGVNKAKVPGK 176
VG NHWW GD SPT+N+MQVC + C F+T+ + ENL IPQY H+VVMGVNK ++PGK
Sbjct 120 VGSNHWWDGDVASPTYNTMQVCDRQNCRFATSGTGTENLNIPQYAHAVVMGVNKERIPGK 179
Query 177 GSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK 218
GSAFF H++ G TAGCVAIDDATLV I+RWLRPGAVIAIA+
Sbjct 180 GSAFFLHSSTGDATAGCVAIDDATLVTIMRWLRPGAVIAIAE 221
>gi|169631376|ref|YP_001705025.1| hypothetical protein MAB_4298c [Mycobacterium abscessus ATCC
19977]
gi|169243343|emb|CAM64371.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=221
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/187 (53%), Positives = 126/187 (68%), Gaps = 2/187 (1%)
Query 32 WFANSVGNATQVVSVVGTGGSTAKMDVYQRTAAGWQPLKTGITTHIGSAGMAPEAKSGYP 91
WFA+SVG A QVV V G GG+ A + +QR W+P++ + + +GSAG + P
Sbjct 37 WFADSVGAARQVVEVQGRGGTKAVIGTWQRKGDAWEPVERDLPSDVGSAGFTDVSSDDNP 96
Query 92 ATPMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTAD 151
ATP GV+SLD AFGT P+ GL Y QV + WW GD SP +N+ Q C +S C F T+
Sbjct 97 ATPTGVFSLDYAFGTEPSVAHGLDYLQVDADDWWDGDPASPHYNTHQRCAESACTFDTSL 156
Query 152 SENLQIPQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRPG 211
SE L Y ++VMGVNK++VPG GSAFF H TDGGP+AGCV +DDA LV++I WLRPG
Sbjct 157 SEELD--GYPRAIVMGVNKSRVPGAGSAFFVHATDGGPSAGCVTLDDAALVRLIGWLRPG 214
Query 212 AVIAIAK 218
AVIAI +
Sbjct 215 AVIAIRR 221
>gi|296392839|ref|YP_003657723.1| ErfK/YbiS/YcfS/YnhG family protein [Segniliparus rotundus DSM
44985]
gi|296179986|gb|ADG96892.1| ErfK/YbiS/YcfS/YnhG family protein [Segniliparus rotundus DSM
44985]
Length=224
Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 96/187 (52%), Positives = 118/187 (64%), Gaps = 0/187 (0%)
Query 32 WFANSVGNATQVVSVVGTGGSTAKMDVYQRTAAGWQPLKTGITTHIGSAGMAPEAKSGYP 91
WFA VG A QVV+V+G A ++V+ + W + + H+GSAG+ A+ GYP
Sbjct 37 WFAGQVGGAQQVVAVLGDQTGHANVEVWGKYNGQWWSMTGPLPGHVGSAGVTDHARDGYP 96
Query 92 ATPMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTAD 151
ATP GV++L AFGT P P LPY + GPN WW GD SP +NS C CPFS +
Sbjct 97 ATPAGVFTLPWAFGTDPAPATALPYHRTGPNDWWVGDVKSPLYNSFSQCAPGSCPFSEKE 156
Query 152 SENLQIPQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRPG 211
SE L IPQY +VVMGVN + PG G AFF H DGGPTAGCV+ID L +I WL+PG
Sbjct 157 SEQLAIPQYALAVVMGVNPQRTPGAGGAFFLHVQDGGPTAGCVSIDKEALRSLITWLKPG 216
Query 212 AVIAIAK 218
AVIAI +
Sbjct 217 AVIAIRR 223
>gi|296392840|ref|YP_003657724.1| ErfK/YbiS/YcfS/YnhG family protein [Segniliparus rotundus DSM
44985]
gi|296179987|gb|ADG96893.1| ErfK/YbiS/YcfS/YnhG family protein [Segniliparus rotundus DSM
44985]
Length=250
Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/192 (51%), Positives = 119/192 (62%), Gaps = 0/192 (0%)
Query 25 SLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQRTAAGWQPLKTGITTHIGSAGMAP 84
SLA PWFAN VG A QVV+V G A ++V+ + W + ++ HIGSAG+A
Sbjct 56 SLAGSPPWFANQVGGAQQVVAVAGDQTGHANVEVWGKYNGQWWSMTGPLSGHIGSAGVAD 115
Query 85 EAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQ 144
A PATP GV+SL AFGT P P LPY + GPN WW D NSP +N Q C
Sbjct 116 VASEDVPATPTGVFSLPWAFGTEPAPATALPYHRTGPNDWWVADVNSPLYNQFQTCAPGS 175
Query 145 CPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQI 204
CPF+ + SE L +P Y +VV+GVN VPG GSA+F H GPTAGCVAI +A L +
Sbjct 176 CPFNESKSERLDVPAYALAVVIGVNPQHVPGAGSAYFLHLDGDGPTAGCVAISEADLRSL 235
Query 205 IRWLRPGAVIAI 216
I WLRPGAV+A+
Sbjct 236 ITWLRPGAVMAV 247
>gi|317507771|ref|ZP_07965474.1| hypothetical protein HMPREF9336_01846 [Segniliparus rugosus ATCC
BAA-974]
gi|316253930|gb|EFV13297.1| hypothetical protein HMPREF9336_01846 [Segniliparus rugosus ATCC
BAA-974]
Length=174
Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/173 (49%), Positives = 109/173 (64%), Gaps = 0/173 (0%)
Query 46 VVGTGGSTAKMDVYQRTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFG 105
+ G A ++V+ + W + + H+GSAG+ +A+ GYPATP GV++L AFG
Sbjct 1 MTGDQAGRANVEVWGKYNQQWWSMTGPLAGHVGSAGITDQARDGYPATPAGVFALPWAFG 60
Query 106 TAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSENLQIPQYKHSVV 165
T P P G+P+ + GPN WW GD SP +NS C CPF+ +SE L IPQY +VV
Sbjct 61 TDPAPQTGIPFHRTGPNDWWVGDVKSPLYNSFSTCVPGSCPFNEKESERLAIPQYALAVV 120
Query 166 MGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAIAK 218
MGVN + PG G AFF H DGGPTAGCV+ID L +I WL+PGAVIAI +
Sbjct 121 MGVNAERKPGAGGAFFLHVQDGGPTAGCVSIDKIALRNLITWLKPGAVIAIRR 173
>gi|296392838|ref|YP_003657722.1| ErfK/YbiS/YcfS/YnhG family protein [Segniliparus rotundus DSM
44985]
gi|296179985|gb|ADG96891.1| ErfK/YbiS/YcfS/YnhG family protein [Segniliparus rotundus DSM
44985]
Length=237
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/188 (48%), Positives = 117/188 (63%), Gaps = 1/188 (0%)
Query 32 WFANSVGNATQVVSVVGTGGST-AKMDVYQRTAAGWQPLKTGITTHIGSAGMAPEAKSGY 90
WFA+ VG ATQVV+V G S A + +++T W + IG+AG+ +A+
Sbjct 49 WFASWVGAATQVVAVTADGDSAQAVVGAWEKTGGTWANTTGDVPGWIGAAGLIRKAEDDI 108
Query 91 PATPMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTA 150
PATP+GV+SL +AFGT P P GLPY Q GPN WW GD SP +NS C+ CPF+ +
Sbjct 109 PATPVGVFSLPAAFGTDPAPPTGLPYRQTGPNDWWVGDVKSPLYNSFATCKPGTCPFNES 168
Query 151 DSENLQIPQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRP 210
SE L Y +VVMGVN ++PG G+A+F H PT GCV+++ L +II WLRP
Sbjct 169 ASEQLDDDSYSLAVVMGVNPGRIPGAGNAYFLHVAADAPTEGCVSMEKPALSEIIAWLRP 228
Query 211 GAVIAIAK 218
GAVIAI +
Sbjct 229 GAVIAIRQ 236
>gi|317507770|ref|ZP_07965473.1| ykud domain-containing protein [Segniliparus rugosus ATCC BAA-974]
gi|316253929|gb|EFV13296.1| ykud domain-containing protein [Segniliparus rugosus ATCC BAA-974]
Length=227
Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/188 (45%), Positives = 112/188 (60%), Gaps = 0/188 (0%)
Query 31 PWFANSVGNATQVVSVVGTGGSTAKMDVYQRTAAGWQPLKTGITTHIGSAGMAPEAKSGY 90
PWF+ VG ATQVV+V G A + +++T W + IGSAG+ + +
Sbjct 24 PWFSGWVGGATQVVAVTGDDDGQAVVGAWEKTDGVWASTTGELPGWIGSAGVTQKVQDDV 83
Query 91 PATPMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTA 150
PATP+GV++L AFGT P P LPY Q GPN WW GD SP +N+ C CPF+
Sbjct 84 PATPVGVFALPEAFGTDPAPPTALPYRQTGPNDWWVGDVKSPLYNTFATCAPGSCPFNEK 143
Query 151 DSENLQIPQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRP 210
SE L Y +VVMGVN +VPG G+A+F H PT GCV+++ + L +I+ WLRP
Sbjct 144 QSEQLDDDSYSLAVVMGVNPNRVPGAGNAYFLHVAADAPTEGCVSMEKSDLREIVSWLRP 203
Query 211 GAVIAIAK 218
GAVIA+ +
Sbjct 204 GAVIAVRQ 211
>gi|317507772|ref|ZP_07965475.1| hypothetical protein HMPREF9336_01847 [Segniliparus rugosus ATCC
BAA-974]
gi|316253931|gb|EFV13298.1| hypothetical protein HMPREF9336_01847 [Segniliparus rugosus ATCC
BAA-974]
Length=267
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/187 (46%), Positives = 109/187 (59%), Gaps = 0/187 (0%)
Query 32 WFANSVGNATQVVSVVGTGGSTAKMDVYQRTAAGWQPLKTGITTHIGSAGMAPEAKSGYP 91
WFAN VG A QVV+V G A ++V+ + W + I HIGSAG+A +A P
Sbjct 48 WFANEVGAAQQVVAVTGQASGQAAVEVWGKYNQLWWSMTGPIAGHIGSAGVADQASEDVP 107
Query 92 ATPMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTAD 151
ATP GV+SL AFGT P LP+ + GPN WW D +SP +N C CPF+
Sbjct 108 ATPAGVFSLPWAFGTEAQPRTSLPFHRTGPNDWWVADVSSPLYNQFYTCAPGSCPFNEQK 167
Query 152 SENLQIPQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRPG 211
SE L + Y +VV+GVN PG GSA+F H GPT GCVAI + L +I WL+PG
Sbjct 168 SERLDVDAYALAVVIGVNPQHAPGAGSAYFLHLDGDGPTQGCVAIGEPDLRSLITWLKPG 227
Query 212 AVIAIAK 218
AV+A+ +
Sbjct 228 AVMAVRR 234
>gi|296141352|ref|YP_003648595.1| hypothetical protein Tpau_3678 [Tsukamurella paurometabola DSM
20162]
gi|296029486|gb|ADG80256.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length=222
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/161 (40%), Positives = 87/161 (55%), Gaps = 7/161 (4%)
Query 52 STAKMDVYQRTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPG 111
+ ++ + R GW + + +G G+ E G P TP GV+ LD AFG NPG
Sbjct 55 TDVQVSAWARLEQGWTRVFGPVPGKVGQQGIG-EGADGVPRTPFGVFRLDLAFGRQDNPG 113
Query 112 GGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSENLQI--PQYKHSVVMGVN 169
LPYT+V HWW G+ +SPT++ M V +S P +SENL P Y ++V N
Sbjct 114 TALPYTKVTNQHWWDGNVDSPTYDRMVVQPQSPGP----ESENLYDIGPVYDYAVHFDNN 169
Query 170 KAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRP 210
A PGKG A F H +DG PT GCVAI ++ ++ WL P
Sbjct 170 PAHTPGKGGAMFLHVSDGQPTLGCVAISREGMISLLTWLSP 210
>gi|256376866|ref|YP_003100526.1| ErfK/YbiS/YcfS/YnhG family protein [Actinosynnema mirum DSM 43827]
gi|255921169|gb|ACU36680.1| ErfK/YbiS/YcfS/YnhG family protein [Actinosynnema mirum DSM 43827]
Length=216
Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/158 (41%), Positives = 86/158 (55%), Gaps = 5/158 (3%)
Query 59 YQRTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPN-PGGGLPYT 117
++R AGW+ +GSAG+ EA TP G + L +FGT P P G LPY
Sbjct 51 WRRDGAGWRVELGPAPAFVGSAGVG-EASESSTRTPAGAHRLTESFGTLPPLPEGRLPYR 109
Query 118 QVGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSENLQI--PQYKHSVVMGVNKA-KVP 174
+V WW D SP +N+ Q C+ CPF + SE L P Y ++V+ N+ VP
Sbjct 110 RVDGADWWVSDQRSPLYNTHQRCEPGTCPFDESASERLAHVGPAYDRAIVIDYNRGPAVP 169
Query 175 GKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRPGA 212
G+GSAFF H GGPTAGCV++D + ++ WL P A
Sbjct 170 GRGSAFFLHVWTGGPTAGCVSVDAPVVNHLLSWLDPAA 207
>gi|302529176|ref|ZP_07281518.1| predicted protein [Streptomyces sp. AA4]
gi|302438071|gb|EFL09887.1| predicted protein [Streptomyces sp. AA4]
Length=194
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/136 (48%), Positives = 80/136 (59%), Gaps = 7/136 (5%)
Query 86 AKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQC 145
A+ G TP G + L AFG APNPG LPY +V + WW D +SP +N+ + +
Sbjct 54 AREGLSRTPAGTWPLTEAFGIAPNPGTRLPYRRVTTSDWWVSDVHSPRYNTHY--RGASG 111
Query 146 PFSTADSENLQI--PQYKHSVVMGVNKAK-VPGKGSAFFFHTTDGGPTAGCVAIDDATLV 202
PF A ENL P Y H+VV+ N++ VPG GSAFF H GGPTAGCVA+ LV
Sbjct 112 PFDQAAGENLGAAGPAYAHAVVIDYNRSPVVPGAGSAFFLHVATGGPTAGCVALALDDLV 171
Query 203 QIIRWLRPGA--VIAI 216
++RWL P VIAI
Sbjct 172 AVLRWLDPARNPVIAI 187
>gi|237733367|ref|ZP_04563848.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|229383579|gb|EEO33670.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length=366
Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/176 (34%), Positives = 95/176 (54%), Gaps = 1/176 (0%)
Query 41 TQVVSVVGTGGSTAKMDVYQRTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSL 100
TQ ++VVG GGS A + ++ + W + T +G G+ + G TP G+YS
Sbjct 184 TQAITVVGNGGSYATLTLHTKRNGIWTETLS-CTARVGKNGITSNKREGDGKTPTGIYSF 242
Query 101 DSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSENLQIPQY 160
AFG A NPG + QV NH+W D NSP +N + ++ +S+A+ Y
Sbjct 243 GQAFGVAGNPGTSRGWLQVNNNHYWVDDVNSPYYNKLVDASQTGIQWSSAEHLIGYPTAY 302
Query 161 KHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRPGAVIAI 216
K+++ + N A PG GSA F H + GG TAGC+++ + +++I++ L+ +I I
Sbjct 303 KYAIAVNYNTACTPGAGSAIFLHCSTGGSTAGCISVSQSNMIRILQSLQGDTLIGI 358
>gi|229009442|ref|ZP_04166698.1| S-layer y and secreted protein with 1 GW repeat fusion protein
[Bacillus mycoides Rock1-4]
gi|228751823|gb|EEM01594.1| S-layer y and secreted protein with 1 GW repeat fusion protein
[Bacillus mycoides Rock1-4]
Length=227
Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/181 (35%), Positives = 96/181 (54%), Gaps = 8/181 (4%)
Query 33 FANSVGNATQVVSVVGT--GGSTAKMDVYQRTAAGWQPLKTGITTHIGSAGMAPEAKSGY 90
+ ++G Q++ V G S A++ +++ W P+ + +IG G A G
Sbjct 35 YLYTIGENQQLILVTANDYGTSKAEIQTFEKRNNKWYPVYAAMQGYIGRDGFAYTMAEGG 94
Query 91 PATPMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQK-SQCPFST 149
++P G Y++ +AFG NPG LPY Q+ N W D NSP +N+ Q QK + +S+
Sbjct 95 KSSPRGKYTIGTAFGRYGNPGTKLPYRQITSNDVWVDDSNSPLYNTWQ--QKPANDRWSS 152
Query 150 ADSENLQIPQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLR 209
A EN+ IPQY + V+ N ++ G GSA FFH +D T GC A ++ ++RWL
Sbjct 153 A--ENMNIPQYDYGFVINYNTERIAGAGSAIFFHISD-MYTYGCTATSRENVLSVLRWLN 209
Query 210 P 210
P
Sbjct 210 P 210
>gi|225863019|ref|YP_002748397.1| S-layer domain protein [Bacillus cereus 03BB102]
gi|225788617|gb|ACO28834.1| S-layer domain protein [Bacillus cereus 03BB102]
Length=530
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/181 (34%), Positives = 97/181 (54%), Gaps = 12/181 (6%)
Query 36 SVGNATQVVSVVGTGGST--AKMDVYQRTAAGWQPLKTGITTHIGSAGMAPEAKSGYPAT 93
++ + QV+ V G +T A++ ++++ W+ K I+ HIG G A E ++
Sbjct 341 TIQHNQQVILVTTKGYNTNQAQVRTFEKSNGKWREQK-NISGHIGKKGFAVEMSESGMSS 399
Query 94 PMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFST--AD 151
P G Y++ SAFG NPG LP+ + PNH W D SP +N++Q + P
Sbjct 400 PRGKYTIGSAFGRQGNPGTKLPFINLTPNHVWVDDSKSPYYNTLQ-----EKPVRNRWKS 454
Query 152 SENLQIPQYKHSVVMGVN-KAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRP 210
+EN+ IP Y + V+ N +++ P KGSA FFH + T GC +D ++ I+RW+ P
Sbjct 455 AENMYIPAYDYGFVINYNTESRTPYKGSAIFFHVSTSW-TEGCTGVDKQNVIDILRWIDP 513
Query 211 G 211
G
Sbjct 514 G 514
>gi|301052709|ref|YP_003790920.1| S-layer-like protein and secreted protein [Bacillus cereus biovar
anthracis str. CI]
gi|300374878|gb|ADK03782.1| S-layer-like protein and secreted protein with 1 GW repeat fusion
protein [Bacillus cereus biovar anthracis str. CI]
Length=530
Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/181 (34%), Positives = 97/181 (54%), Gaps = 12/181 (6%)
Query 36 SVGNATQVVSVVGTGGST--AKMDVYQRTAAGWQPLKTGITTHIGSAGMAPEAKSGYPAT 93
++ + QV+ V G +T A++ ++++ W+ K I+ HIG G A E ++
Sbjct 341 TIQHNQQVILVTTKGYNTNQAQVRTFEKSNGKWREQK-NISGHIGKKGFAVEMSESGMSS 399
Query 94 PMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFST--AD 151
P G Y++ SAFG NPG LP+ + PNH W D SP +N++Q + P
Sbjct 400 PRGKYTIGSAFGRQGNPGTKLPFINLTPNHVWVDDSKSPYYNTLQ-----EKPVRNRWKS 454
Query 152 SENLQIPQYKHSVVMGVN-KAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRP 210
+EN+ IP Y + V+ N +++ P KGSA FFH + T GC +D ++ I+RW+ P
Sbjct 455 AENMYIPAYDYGFVINYNTESRTPYKGSAIFFHVSTSW-TEGCTGVDKQNVIDILRWIDP 513
Query 211 G 211
G
Sbjct 514 G 514
>gi|228990084|ref|ZP_04150056.1| Cell wall binding repeat protein [Bacillus pseudomycoides DSM
12442]
gi|228769612|gb|EEM18203.1| Cell wall binding repeat protein [Bacillus pseudomycoides DSM
12442]
Length=394
Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/178 (35%), Positives = 95/178 (54%), Gaps = 8/178 (4%)
Query 36 SVGNATQVVSVVGT--GGSTAKMDVYQRTAAGWQPLKTGITTHIGSAGMAPEAKSGYPAT 93
++G Q++ V G S A++ +++ W P+ + +IG G A G ++
Sbjct 205 TIGENQQLILVTANDYGTSKAEIQTFEKRNNKWYPVYAAMQGYIGRDGFAYTMAEGGKSS 264
Query 94 PMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQK-SQCPFSTADS 152
P G Y++ +AFG NPG LPY Q+ N W D NSP +N+ Q QK + +S+A
Sbjct 265 PRGKYTIGTAFGRYGNPGTKLPYRQITSNDVWVDDSNSPLYNTWQ--QKPANDRWSSA-- 320
Query 153 ENLQIPQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRP 210
EN+ IPQY + V+ N ++ G GSA FFH +D T GC A ++ ++RWL P
Sbjct 321 ENMNIPQYDYGFVINYNTERIAGAGSAIFFHISD-MYTYGCTATSRENVLSVLRWLNP 377
>gi|111022861|ref|YP_705833.1| hypothetical protein RHA1_ro05898 [Rhodococcus jostii RHA1]
gi|110822391|gb|ABG97675.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=222
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/222 (36%), Positives = 109/222 (50%), Gaps = 14/222 (6%)
Query 3 RLLALLCAAVCTGCVAVVLAPVSLAVVNPWFANSVGNATQVVSVVG--TGGSTAKMDVYQ 60
R+ L A + + +VL P + A N A G + QV++V G A++ ++
Sbjct 5 RVGRLWLAGLMVALIGLVLVPGASATPN--RAVFSGASDQVITVYAPSAGAVVAELTAWE 62
Query 61 RTAAG-WQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQV 119
R A G WQ + +G+ G+ A TP GV+ L AFG P P +PY Q
Sbjct 63 RNADGTWQVFAGPVPADVGAEGIG-AANEFSTRTPAGVFPLSQAFGRQPAPETAMPYFQS 121
Query 120 GPNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSENLQI--PQYKHSVVMGVNKAKVPGKG 177
WW + SPT+N+ ++ P +SENL P Y H+V +G N A++PG G
Sbjct 122 DRRDWWDANPLSPTYNTH--VRQDASP--GGNSENLYAAGPLYDHAVAIGYNAARIPGLG 177
Query 178 SAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRPGA--VIAIA 217
SA F H TDG T GCVAID TL ++ L P VI IA
Sbjct 178 SAMFLHVTDGTTTEGCVAIDRGTLTSVLGRLDPAKNPVIEIA 219
>gi|326381844|ref|ZP_08203537.1| ErfK/YbiS/YcfS/YnhG family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326199270|gb|EGD56451.1| ErfK/YbiS/YcfS/YnhG family protein [Gordonia neofelifaecis NRRL
B-59395]
Length=284
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/161 (38%), Positives = 87/161 (55%), Gaps = 8/161 (4%)
Query 53 TAKMDVYQRTAAG-WQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPNPG 111
TA + +++ A+G W+P+ +G GM +A+ TP G + L+ AFG NPG
Sbjct 79 TATLTAFEKDASGQWKPVIGPTKAFLGEKGMG-KAQDNVYRTPEGTFPLNQAFGRQENPG 137
Query 112 GGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSENLQI--PQYKHSVVMGVN 169
+PY Q WW ++ SPT+N+ + S P DSENL P Y ++V + N
Sbjct 138 TKMPYFQTTTQDWWDSNEKSPTYNTH--VKSSTSP--GGDSENLYNAGPVYDYAVNINHN 193
Query 170 KAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRP 210
PG SA F H T+G PT GCVAID +V+I++WL P
Sbjct 194 PTNTPGDASAIFLHVTNGEPTQGCVAIDRDKMVEILKWLDP 234
>gi|229000548|ref|ZP_04160091.1| S-layer y and secreted protein with 1 GW repeat fusion protein
[Bacillus mycoides Rock3-17]
gi|228759191|gb|EEM08194.1| S-layer y and secreted protein with 1 GW repeat fusion protein
[Bacillus mycoides Rock3-17]
Length=180
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/163 (35%), Positives = 86/163 (53%), Gaps = 8/163 (4%)
Query 50 GGSTAKMDVYQRTAAGWQPLKTGITTHIGSAGMAPEAKSGYPATPMGVYSLDSAFGTAPN 109
G S A++ +++ W P+ + +IG G A G ++P G Y++ +AFG N
Sbjct 7 GTSKAEIQTFEKRNNKWYPVYAAMQGYIGRDGFAYTMAEGGKSSPRGKYTIGTAFGRYGN 66
Query 110 PGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFST--ADSENLQIPQYKHSVVMG 167
PG LPY Q+ N W D NSP +N+ Q Q P + + +EN+ IPQY + V+
Sbjct 67 PGTKLPYRQITSNDVWVDDSNSPLYNTWQ-----QKPANDRWSSAENMNIPQYDYGFVIN 121
Query 168 VNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRP 210
N ++ G GSA FFH +D T GC A ++ ++RWL P
Sbjct 122 YNTERIAGAGSAIFFHISD-MYTYGCTATSRENVLSVLRWLNP 163
>gi|337763532|emb|CCB72240.1| Secreted protein (fragment) [Streptomyces cattleya NRRL 8057]
Length=233
Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/194 (37%), Positives = 102/194 (53%), Gaps = 15/194 (7%)
Query 36 SVGNATQVVSVVGTGGSTAKMDVYQRTAAGWQPLKTGITTHIGSAGMAPEA--KSGYPAT 93
+VG ATQV++V G S A + + +GW + T +G+ G+ A + G T
Sbjct 41 AVGRATQVITVRARG-SYATVTAWSADGSGWHRVLTTTHARVGAHGVTDGATRRQGSRTT 99
Query 94 PMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTA--- 150
P G Y + AFG P+PG LPY V P+ WW D +S +N M+ + P + A
Sbjct 100 PTGTYPVTRAFGVGPDPGTALPYHHVTPHDWWVEDPDSRWYNRMRDERYGGFPLTEAGEH 159
Query 151 DSENLQ---IPQYKHSVVMGVNKAK-VPGKGSAFFFHTT--DGGPTAGCVAIDDATLVQI 204
SE+L +P Y H++V+ N A VPG+G+ F H GPTAGCVA+ L ++
Sbjct 160 GSEHLAAHPVP-YHHALVVDYNTAPVVPGRGAGIFLHDLGPQAGPTAGCVAVPAGVLTRV 218
Query 205 IRWLRPGA--VIAI 216
+RW+ P VIAI
Sbjct 219 LRWIDPARHPVIAI 232
>gi|343925106|ref|ZP_08764638.1| hypothetical protein GOALK_033_00970 [Gordonia alkanivorans NBRC
16433]
gi|343765037|dbj|GAA11564.1| hypothetical protein GOALK_033_00970 [Gordonia alkanivorans NBRC
16433]
Length=327
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/173 (38%), Positives = 92/173 (54%), Gaps = 10/173 (5%)
Query 43 VVSVVGTGGSTAKMDVYQRTAAG-WQPLK-TGITT-HIGSAGMAPEAKSGYPATPMGVYS 99
VV+ +TA + +++ G W+P+ G T +GS GM E + P TP G +
Sbjct 96 VVTAPKASDTTATLTAFEKGNDGSWKPVPGLGPTKAFLGSLGMG-EPQDNVPRTPEGTFP 154
Query 100 LDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSENLQI-- 157
LD AFG NPG +PY +V WW D SPT+N+ ++ Q P DSENL
Sbjct 155 LDQAFGRQENPGTKMPYLKVDTQDWWDSDPKSPTYNTH--VRQPQSP--GGDSENLYNSG 210
Query 158 PQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRP 210
P Y ++V + N + PGK +A F H T+ PT GCVAI+ + +I+ WL P
Sbjct 211 PVYDYAVNIAHNPQRTPGKATAMFLHVTNDQPTLGCVAIERELMKKILVWLDP 263
>gi|324325189|gb|ADY20449.1| S-layer domain protein [Bacillus thuringiensis serovar finitimus
YBT-020]
Length=530
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/178 (34%), Positives = 92/178 (52%), Gaps = 8/178 (4%)
Query 36 SVGNATQVVSVVGTGGST--AKMDVYQRTAAGWQPLKTGITTHIGSAGMAPEAKSGYPAT 93
++ N QV+ V G T A++ ++ + W+ K I +IG G A E ++
Sbjct 341 TIQNNQQVILVTTKGYHTNQAQIRTFENSNGKWREQK-NINGYIGKKGFAVEMSESGMSS 399
Query 94 PMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSE 153
P G Y++ SAFG NPG LP+ + PNH W D SP +N++ Q+ +E
Sbjct 400 PRGKYTIGSAFGRQGNPGTKLPFIHLTPNHVWVDDSKSPYYNTL---QEKPVRGRWKSAE 456
Query 154 NLQIPQYKHSVVMGVN-KAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRP 210
N+ IP Y + V+ N +++ P KGSA FFH + T GC +D ++ I+RW+ P
Sbjct 457 NMYIPAYDYGFVINYNTESRTPYKGSAIFFHVSTSW-TEGCTGVDKQNVIDILRWIDP 513
>gi|345446893|gb|AEN91910.1| S-layer y and secreted protein with 1 GW repeat fusion protein
[Bacillus megaterium WSH-002]
Length=238
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/177 (36%), Positives = 92/177 (52%), Gaps = 7/177 (3%)
Query 36 SVGNATQVVSVVGTGGST--AKMDVYQRTAAGWQPLKTGITTHIGSAGMAPEAKSGYPAT 93
++GNA QV+ V T AK+ +++ W+ + T +G G A K G +
Sbjct 50 TLGNAQQVILVTADNYDTKSAKIQTFEKVDGKWKQVLTA-NGVLGQKGFALSKKEGDMES 108
Query 94 PMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSE 153
P G Y++ +AFG NPG LPY ++ N W D S +N+ Q QK T+ +E
Sbjct 109 PTGKYTIGTAFGRYANPGTKLPYRKITANDVWVDDSKSSLYNTWQ--QKPANGRWTS-AE 165
Query 154 NLQIPQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRP 210
N+ IP Y + V+ N+++ PGKGSA FFH TAGC A +V I++WL P
Sbjct 166 NMDIPAYDYGFVINYNESRTPGKGSAIFFH-VGTNYTAGCTATSKEQVVSILKWLNP 221
>gi|295702401|ref|YP_003595476.1| SH3 domain-containing protein [Bacillus megaterium DSM 319]
gi|294800060|gb|ADF37126.1| SH3 domain protein [Bacillus megaterium DSM 319]
Length=444
Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/181 (35%), Positives = 93/181 (52%), Gaps = 15/181 (8%)
Query 36 SVGNATQVVSVVGTGGST--AKMDVYQRTAAGWQPLKT--GITTHIGSAGMAPEAKSGYP 91
++GNA QV+ V T AK+ +++ W+ + T G+ +G G A K G
Sbjct 256 TLGNAQQVILVTADNYDTKSAKIQTFEKVDGKWKQVLTANGV---LGQKGFALSKKEGDM 312
Query 92 ATPMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTA- 150
+P G Y++ +AFG NPG LPY ++ N W D S +N+ Q Q P +
Sbjct 313 ESPTGKYTIGTAFGRYANPGTKLPYRKITANDVWVDDSKSSLYNTWQ-----QKPANGRW 367
Query 151 -DSENLQIPQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLR 209
+EN+ IP Y + V+ N+++ PGKGSA FFH TAGC A +V I++WL
Sbjct 368 MSAENMDIPAYDYGFVINYNESRTPGKGSAIFFHVGT-NYTAGCTATSKEQVVSILKWLN 426
Query 210 P 210
P
Sbjct 427 P 427
>gi|226365369|ref|YP_002783152.1| hypothetical protein ROP_59600 [Rhodococcus opacus B4]
gi|226243859|dbj|BAH54207.1| hypothetical protein [Rhodococcus opacus B4]
Length=217
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/187 (37%), Positives = 97/187 (52%), Gaps = 12/187 (6%)
Query 38 GNATQVVSVVG--TGGSTAKMDVYQRTAAG-WQPLKTGITTHIGSAGMAPEAKSGYPATP 94
G + QV++V G +A++ ++R + G WQ + +G+ G+ A TP
Sbjct 33 GVSDQVITVYAPSAGSVSAELTAWERRSDGTWQVFAGPVAADVGAEGIG-AANEFSTRTP 91
Query 95 MGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSEN 154
GV+ L AFG P P +PY Q WW + SPT+N+ ++ P +SEN
Sbjct 92 AGVFPLSQAFGRQPAPETAMPYFQADRRDWWDSNPLSPTYNTH--VRQDASP--GGNSEN 147
Query 155 LQI--PQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRPGA 212
L P Y +++ +G N A+VPG GSA F H TDG T GCVAID TL+ ++ L P
Sbjct 148 LYSAGPLYDYALAIGYNAARVPGLGSAMFLHVTDGTTTEGCVAIDRDTLITLLGRLDPAK 207
Query 213 --VIAIA 217
VI IA
Sbjct 208 NPVIEIA 214
>gi|229010464|ref|ZP_04167667.1| S-layer y and secreted protein with 1 GW repeat fusion protein
[Bacillus mycoides DSM 2048]
gi|228750807|gb|EEM00630.1| S-layer y and secreted protein with 1 GW repeat fusion protein
[Bacillus mycoides DSM 2048]
Length=530
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/179 (33%), Positives = 94/179 (53%), Gaps = 8/179 (4%)
Query 36 SVGNATQVVSVVGTGGST--AKMDVYQRTAAGWQPLKTGITTHIGSAGMAPEAKSGYPAT 93
++ N QV+ V G +T A++ ++ + W+ K I+ +IG G A E ++
Sbjct 341 TIQNNQQVILVTTKGYNTDQAQVRTFENSNGKWREQK-NISGYIGKKGFAVEMSESGMSS 399
Query 94 PMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSE 153
P G Y++ +AFG NPG LP+ + NH W D SP +N++ Q+ +E
Sbjct 400 PRGKYTIGAAFGRQGNPGTKLPFINLTQNHVWVDDSTSPYYNTL---QEKPVRGRWKSAE 456
Query 154 NLQIPQYKHSVVMGVN-KAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRPG 211
N+ IP Y + V+ N +++ P KGSA FFH + T GC +D ++ I+RW+ PG
Sbjct 457 NMYIPAYDYGFVINYNTESRTPYKGSAIFFHVSTSW-TEGCTGVDKQNVIDILRWIDPG 514
>gi|52144249|ref|YP_082577.1| GW repeat-containing protein [Bacillus cereus E33L]
gi|51977718|gb|AAU19268.1| S-layer homology and secreted protein with 1 GW repeat fusion
protein [Bacillus cereus E33L]
Length=530
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/179 (32%), Positives = 96/179 (54%), Gaps = 8/179 (4%)
Query 36 SVGNATQVVSVVGTGGST--AKMDVYQRTAAGWQPLKTGITTHIGSAGMAPEAKSGYPAT 93
++ + QV+ V G +T A++ ++++ W+ K I+ +IG G A E ++
Sbjct 341 TIQHNQQVILVTTKGYNTNQAQVRTFEKSNGKWREQK-NISGYIGKTGFAVEMSESGVSS 399
Query 94 PMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTADSE 153
P G Y++ +AFG NPG LP+ + P+H W D SP +N++ Q+ +E
Sbjct 400 PRGKYTIGAAFGRQGNPGTKLPFINLTPSHVWVDDSKSPYYNTL---QEKPVRGRWKSAE 456
Query 154 NLQIPQYKHSVVMGVN-KAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRPG 211
N+ IP Y + V+ N +++ P KGSA FFH + T GC +D ++ I+RW+ PG
Sbjct 457 NMYIPAYDYGFVINYNTESRTPYKGSAIFFHVSTSW-TEGCTGVDKQNVIDILRWIDPG 514
>gi|294497036|ref|YP_003560736.1| SH3 domain-containing protein [Bacillus megaterium QM B1551]
gi|294346973|gb|ADE67302.1| SH3 domain protein [Bacillus megaterium QM B1551]
Length=444
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/181 (35%), Positives = 92/181 (51%), Gaps = 15/181 (8%)
Query 36 SVGNATQVVSVVGTGGST--AKMDVYQRTAAGWQPLKT--GITTHIGSAGMAPEAKSGYP 91
++GNA QV+ V T AK+ +++ W+ + T G+ +G G A K G
Sbjct 256 TLGNAQQVILVTADNYDTKSAKIQTFEKVDGKWKQVLTANGV---LGQKGFALSKKEGDM 312
Query 92 ATPMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFST-- 149
+P G Y++ +AFG NPG LPY ++ N W D S +N+ Q Q P +
Sbjct 313 ESPTGKYTIGTAFGRYENPGTKLPYRKITANDVWVDDSKSSLYNTWQ-----QKPANGRW 367
Query 150 ADSENLQIPQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLR 209
+EN+ IP Y + V+ N+++ PG GSA FFH TAGC A +V I++WL
Sbjct 368 TSAENMDIPAYDYGFVINYNESRTPGNGSAIFFH-VGTNYTAGCTATSKEQVVSILKWLN 426
Query 210 P 210
P
Sbjct 427 P 427
>gi|262201622|ref|YP_003272830.1| ErfK/YbiS/YcfS/YnhG family protein [Gordonia bronchialis DSM
43247]
gi|262084969|gb|ACY20937.1| ErfK/YbiS/YcfS/YnhG family protein [Gordonia bronchialis DSM
43247]
Length=314
Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/180 (35%), Positives = 89/180 (50%), Gaps = 8/180 (4%)
Query 34 ANSVGNATQVVSVVGTGGSTAKMDVYQR-TAAGWQPLKTGITTHIGSAGMAPEAKSGYPA 92
A S N VVS +TA + ++R + W+P+ +GS GM + Y
Sbjct 73 AGSKTNQLIVVSAPKASDTTATLTGFERGSDKSWKPVIGPTKAFLGSLGMGQPQDNVY-R 131
Query 93 TPMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQVCQKSQCPFSTADS 152
TP G ++LD AFG NPG +PY + WW + SPT+N+ + P DS
Sbjct 132 TPEGNFALDQAFGRQANPGTKMPYFKTDAQDWWDSNPKSPTYNTH--VRSVNGP--GGDS 187
Query 153 ENLQI--PQYKHSVVMGVNKAKVPGKGSAFFFHTTDGGPTAGCVAIDDATLVQIIRWLRP 210
ENL Y ++V + N + PGK SA F H T+ PT GCVAI+ + + ++WL P
Sbjct 188 ENLYKVGEMYDYAVNIAHNPQRTPGKASAIFLHVTNNQPTMGCVAIERELMKKTLQWLDP 247
>gi|160937044|ref|ZP_02084407.1| hypothetical protein CLOBOL_01933 [Clostridium bolteae ATCC BAA-613]
gi|158439945|gb|EDP17693.1| hypothetical protein CLOBOL_01933 [Clostridium bolteae ATCC BAA-613]
Length=333
Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/202 (30%), Positives = 98/202 (49%), Gaps = 10/202 (4%)
Query 22 APVSLAVVNPWFANSVGNATQVVSVVGTGGSTAKMDVYQRTAAGWQPL--KTGITTHIGS 79
A V V+ P +A Q+V VVGTGG +A + Y+++ W+ + + GI +G
Sbjct 129 AAVENGVIQPQNLEGAKDADQLVVVVGTGGCSADVYYYKKSGEAWEMVWKEAGI---VGR 185
Query 80 AGMAPEAKSGYPATPMGVYSLDSAFGTAPNPGGGLPYTQVGPNHWWSGDDNSPTFNSMQV 139
G+ + G +TP G Y AFG NPG LPY ++ +W D SP +N +
Sbjct 186 NGITDQKTEGDGSTPSGTYGFTMAFGLRENPGSVLPYHKITKGDYWVDDSASPYYNKLVN 245
Query 140 CQKSQCPFSTADSENLQIPQYKHSVVMGVNKAKVPGKGSAFFFH----TTDGGPTAGCVA 195
+ +++A++ P Y +++ + N+A PGKGSA F H D G +AGC+
Sbjct 246 TSQVAKTWNSAENMAAASPYYNYALALNYNEACEPGKGSAIFLHCFTAARDNG-SAGCIR 304
Query 196 IDDATLVQIIRWLRPGAVIAIA 217
+ ++++ I IA
Sbjct 305 LPQERAKELVQSATEHTKIVIA 326
Lambda K H
0.317 0.132 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 267044465184
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40