BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0311

Length=409
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15607452|ref|NP_214825.1|  hypothetical protein Rv0311 [Mycoba...   836    0.0   
gi|289748081|ref|ZP_06507459.1|  conserved hypothetical protein [...   834    0.0   
gi|339630385|ref|YP_004722027.1|  hypothetical protein MAF_03130 ...   833    0.0   
gi|340625342|ref|YP_004743794.1|  hypothetical protein MCAN_03131...   832    0.0   
gi|183980589|ref|YP_001848880.1|  hypothetical protein MMAR_0561 ...   718    0.0   
gi|118616939|ref|YP_905271.1|  hypothetical protein MUL_1225 [Myc...   707    0.0   
gi|240172743|ref|ZP_04751402.1|  hypothetical protein MkanA1_2573...   694    0.0   
gi|41409897|ref|NP_962733.1|  hypothetical protein MAP3799 [Mycob...   676    0.0   
gi|336460241|gb|EGO39144.1|  hypothetical protein MAPs_42690 [Myc...   676    0.0   
gi|118465398|ref|YP_883973.1|  hypothetical protein MAV_4850 [Myc...   672    0.0   
gi|254777290|ref|ZP_05218806.1|  hypothetical protein MaviaA2_218...   672    0.0   
gi|296167657|ref|ZP_06849928.1|  conserved hypothetical protein [...   657    0.0   
gi|342859212|ref|ZP_08715866.1|  hypothetical protein MCOL_10048 ...   653    0.0   
gi|254821589|ref|ZP_05226590.1|  hypothetical protein MintA_16767...   643    0.0   
gi|333988953|ref|YP_004521567.1|  hypothetical protein JDM601_031...   619    2e-175
gi|118472148|ref|YP_890082.1|  hypothetical protein MSMEG_5855 [M...   612    3e-173
gi|126437522|ref|YP_001073213.1|  hypothetical protein Mjls_4957 ...   605    5e-171
gi|108801537|ref|YP_641734.1|  hypothetical protein Mmcs_4574 [My...   602    3e-170
gi|120406101|ref|YP_955930.1|  hypothetical protein Mvan_5153 [My...   599    2e-169
gi|169628315|ref|YP_001701964.1|  hypothetical protein MAB_1222 [...   593    2e-167
gi|145222196|ref|YP_001132874.1|  hypothetical protein Mflv_1604 ...   592    5e-167
gi|315442635|ref|YP_004075514.1|  hypothetical protein Mspyr1_099...   588    6e-166
gi|326331680|ref|ZP_08197968.1|  hypothetical protein NBCG_03119 ...   502    5e-140
gi|254818479|ref|ZP_05223480.1|  hypothetical protein MintA_01074...   455    6e-126
gi|167966672|ref|ZP_02548949.1|  hypothetical protein MtubH3_0080...   419    5e-115
gi|54024554|ref|YP_118796.1|  hypothetical protein nfa25850 [Noca...   416    4e-114
gi|167967612|ref|ZP_02549889.1|  hypothetical protein MtubH3_0608...   415    7e-114
gi|325676482|ref|ZP_08156160.1|  hypothetical protein HMPREF0724_...   408    8e-112
gi|312138818|ref|YP_004006154.1|  hypothetical protein REQ_13850 ...   405    7e-111
gi|226306861|ref|YP_002766821.1|  hypothetical protein RER_33740 ...   403    3e-110
gi|229492729|ref|ZP_04386530.1|  conserved hypothetical protein [...   402    4e-110
gi|226364183|ref|YP_002781965.1|  hypothetical protein ROP_47730 ...   394    1e-107
gi|111021646|ref|YP_704618.1|  hypothetical protein RHA1_ro04674 ...   392    7e-107
gi|343927844|ref|ZP_08767312.1|  hypothetical protein GOALK_097_0...   378    9e-103
gi|262203703|ref|YP_003274911.1|  hypothetical protein Gbro_3840 ...   378    1e-102
gi|326384235|ref|ZP_08205917.1|  hypothetical protein SCNU_14926 ...   375    9e-102
gi|319950409|ref|ZP_08024325.1|  hypothetical protein ES5_12550 [...   317    3e-84 
gi|41408293|ref|NP_961129.1|  hypothetical protein MAP2195 [Mycob...   265    1e-68 
gi|336458111|gb|EGO37094.1|  hypothetical protein MAPs_15690 [Myc...   252    1e-64 
gi|294495818|ref|YP_003542311.1|  ATP-NAD/AcoX kinase [Methanohal...  40.8    0.40  
gi|302335610|ref|YP_003800817.1|  phosphoenolpyruvate carboxykina...  37.7    3.6   
gi|124002679|ref|ZP_01687531.1|  hypothetical protein M23134_0412...  37.0    5.8   
gi|311742863|ref|ZP_07716671.1|  ABC superfamily ATP binding cass...  36.2    9.6   


>gi|15607452|ref|NP_214825.1| hypothetical protein Rv0311 [Mycobacterium tuberculosis H37Rv]
 gi|15839695|ref|NP_334732.1| hypothetical protein MT0324 [Mycobacterium tuberculosis CDC1551]
 gi|31791490|ref|NP_853983.1| hypothetical protein Mb0319 [Mycobacterium bovis AF2122/97]
 67 more sequence titles
 Length=409

 Score =  836 bits (2159),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 409/409 (100%), Positives = 409/409 (100%), Gaps = 0/409 (0%)

Query  1    MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY  60
            MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY
Sbjct  1    MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY  60

Query  61   TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEP  120
            TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEP
Sbjct  61   TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEP  120

Query  121  MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE  180
            MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE
Sbjct  121  MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE  180

Query  181  AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCL  240
            AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCL
Sbjct  181  AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCL  240

Query  241  QMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL  300
            QMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL
Sbjct  241  QMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL  300

Query  301  ELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVR  360
            ELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVR
Sbjct  301  ELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVR  360

Query  361  ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTVK  409
            ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTVK
Sbjct  361  ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTVK  409


>gi|289748081|ref|ZP_06507459.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289756376|ref|ZP_06515754.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294995068|ref|ZP_06800759.1| hypothetical protein Mtub2_11285 [Mycobacterium tuberculosis 
210]
 gi|289688609|gb|EFD56097.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289711940|gb|EFD75952.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|326906065|gb|EGE52998.1| hypothetical protein TBPG_04044 [Mycobacterium tuberculosis W-148]
 gi|339293368|gb|AEJ45479.1| hypothetical protein CCDC5079_0289 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339297013|gb|AEJ49123.1| hypothetical protein CCDC5180_0286 [Mycobacterium tuberculosis 
CCDC5180]
Length=409

 Score =  834 bits (2155),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 408/409 (99%), Positives = 409/409 (100%), Gaps = 0/409 (0%)

Query  1    MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY  60
            MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY
Sbjct  1    MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY  60

Query  61   TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEP  120
            TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDV+P
Sbjct  61   TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVDP  120

Query  121  MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE  180
            MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE
Sbjct  121  MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE  180

Query  181  AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCL  240
            AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCL
Sbjct  181  AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCL  240

Query  241  QMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL  300
            QMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL
Sbjct  241  QMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL  300

Query  301  ELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVR  360
            ELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVR
Sbjct  301  ELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVR  360

Query  361  ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTVK  409
            ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTVK
Sbjct  361  ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTVK  409


>gi|339630385|ref|YP_004722027.1| hypothetical protein MAF_03130 [Mycobacterium africanum GM041182]
 gi|339329741|emb|CCC25385.1| hypothetical protein MAF_03130 [Mycobacterium africanum GM041182]
Length=409

 Score =  833 bits (2153),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 408/409 (99%), Positives = 408/409 (99%), Gaps = 0/409 (0%)

Query  1    MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY  60
            MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY
Sbjct  1    MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY  60

Query  61   TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEP  120
            TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEP
Sbjct  61   TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEP  120

Query  121  MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE  180
            MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE
Sbjct  121  MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE  180

Query  181  AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCL  240
            AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCL
Sbjct  181  AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCL  240

Query  241  QMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL  300
            QMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL
Sbjct  241  QMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL  300

Query  301  ELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVR  360
            ELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVD HLKVR
Sbjct  301  ELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDSHLKVR  360

Query  361  ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTVK  409
            ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTVK
Sbjct  361  ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTVK  409


>gi|340625342|ref|YP_004743794.1| hypothetical protein MCAN_03131 [Mycobacterium canettii CIPT 
140010059]
 gi|340003532|emb|CCC42653.1| hypothetical protein MCAN_03131 [Mycobacterium canettii CIPT 
140010059]
Length=409

 Score =  832 bits (2150),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 407/409 (99%), Positives = 407/409 (99%), Gaps = 0/409 (0%)

Query  1    MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY  60
            MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY
Sbjct  1    MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY  60

Query  61   TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEP  120
            TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEP
Sbjct  61   TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEP  120

Query  121  MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE  180
            MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE
Sbjct  121  MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE  180

Query  181  AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCL  240
            AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLD GAFSHSALVRMADEVCL
Sbjct  181  AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDLGAFSHSALVRMADEVCL  240

Query  241  QMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL  300
            QMHLLNLSFA AVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL
Sbjct  241  QMHLLNLSFAFAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL  300

Query  301  ELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVR  360
            ELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVR
Sbjct  301  ELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVR  360

Query  361  ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTVK  409
            ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTVK
Sbjct  361  ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTVK  409


>gi|183980589|ref|YP_001848880.1| hypothetical protein MMAR_0561 [Mycobacterium marinum M]
 gi|183173915|gb|ACC39025.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=409

 Score =  718 bits (1854),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 342/408 (84%), Positives = 370/408 (91%), Gaps = 0/408 (0%)

Query  1    MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY  60
            MSQSRYAGLSRSELA+L+PELLLIGQLIDRSGMAWCIQAFGR+EMLQIAIEEWAGASPIY
Sbjct  1    MSQSRYAGLSRSELAILVPELLLIGQLIDRSGMAWCIQAFGREEMLQIAIEEWAGASPIY  60

Query  61   TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEP  120
            TKRMQ+ALNFEG DVPTIFKGLQLDIGAPPQFMDFR+ LHDRWHGEFHLDHCGALLDVEP
Sbjct  61   TKRMQRALNFEGTDVPTIFKGLQLDIGAPPQFMDFRYALHDRWHGEFHLDHCGALLDVEP  120

Query  121  MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE  180
            MGD+YV GMCHTIEDPTFDATAIATNPRAQVRPIHRPPR PADRHPHCAWTVIIDE+YPE
Sbjct  121  MGDEYVFGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRSPADRHPHCAWTVIIDEAYPE  180

Query  181  AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCL  240
             +GIPALD VRETKAA W+L  +D S++GL DYSG L+SDLDF  FSHSALVRMA+EVCL
Sbjct  181  VKGIPALDVVRETKAAAWKLAAIDPSEEGLADYSGALLSDLDFTDFSHSALVRMAEEVCL  240

Query  241  QMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL  300
            QMHLLNLSF IAVR+RA ADA+LA+SV TRQL GVAGL AERI RA+ LPGG EG L V 
Sbjct  241  QMHLLNLSFGIAVRERAGADAELAVSVGTRQLTGVAGLAAERIQRALGLPGGAEGVLRVF  300

Query  301  ELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVR  360
            ELHPL NP GYV+AET  DRL+VH SPAH DGAWISLCTP SVQPLQAIATA+DPHL+VR
Sbjct  301  ELHPLFNPTGYVVAETVADRLLVHRSPAHDDGAWISLCTPESVQPLQAIATAIDPHLEVR  360

Query  361  ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTV  408
            ++GTDTDWTAEL+  + PA ELPEVLVAKVS G+ FQF+PRRSLPLTV
Sbjct  361  VAGTDTDWTAELVRTERPADELPEVLVAKVSHGAQFQFQPRRSLPLTV  408


>gi|118616939|ref|YP_905271.1| hypothetical protein MUL_1225 [Mycobacterium ulcerans Agy99]
 gi|118569049|gb|ABL03800.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=409

 Score =  707 bits (1825),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 338/408 (83%), Positives = 367/408 (90%), Gaps = 0/408 (0%)

Query  1    MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY  60
            MSQSRYAGLSRSELA+L+PELLLIGQLIDRSGMAWCIQAFGR+EMLQIAIEEW GASPIY
Sbjct  1    MSQSRYAGLSRSELAILVPELLLIGQLIDRSGMAWCIQAFGREEMLQIAIEEWTGASPIY  60

Query  61   TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEP  120
            TKRMQ ALNFEG DVPTIFKGLQLDIGAPPQFMDFR+ LHDRWHGEFHLDHCGALLDVEP
Sbjct  61   TKRMQWALNFEGTDVPTIFKGLQLDIGAPPQFMDFRYGLHDRWHGEFHLDHCGALLDVEP  120

Query  121  MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE  180
            MGD+YV GMCHTIEDPTFDATAIAT+PRAQ+RPIHRPPR PADRHPHCAWTVIIDE+YPE
Sbjct  121  MGDEYVFGMCHTIEDPTFDATAIATDPRAQMRPIHRPPRSPADRHPHCAWTVIIDEAYPE  180

Query  181  AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCL  240
             +GIPALD VRETKAA W+L  +D S++GL DYSG L+SDLDF  FSHSALVRMA+EVCL
Sbjct  181  VKGIPALDVVRETKAAAWKLAVIDPSEEGLADYSGALLSDLDFTDFSHSALVRMAEEVCL  240

Query  241  QMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL  300
            QMHL NLSF IAVR+RA ADA+L +SV TRQL GVAGL AERI RA+ LPGG EG L V 
Sbjct  241  QMHLFNLSFGIAVRERAGADAELVVSVGTRQLTGVAGLAAERIQRALGLPGGAEGVLRVF  300

Query  301  ELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVR  360
            ELHPL NPAGYV+AET  DRL+VH SPAHADGAWISLCTP SVQPLQAIATAV+ HL+VR
Sbjct  301  ELHPLFNPAGYVVAETVADRLLVHRSPAHADGAWISLCTPESVQPLQAIATAVELHLEVR  360

Query  361  ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTV  408
            ++GTDTDWTAEL+  + PA ELPEVLVAKVS G+ FQF+PRRSLPLTV
Sbjct  361  VAGTDTDWTAELVRTEKPADELPEVLVAKVSHGAQFQFQPRRSLPLTV  408


>gi|240172743|ref|ZP_04751402.1| hypothetical protein MkanA1_25737 [Mycobacterium kansasii ATCC 
12478]
Length=409

 Score =  694 bits (1791),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 330/407 (82%), Positives = 365/407 (90%), Gaps = 0/407 (0%)

Query  1    MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY  60
            MSQSRYAGLSR+ELA+L+PELLLIGQLIDRSGMAWCIQAFGR+EMLQIAIEEWA ASPIY
Sbjct  1    MSQSRYAGLSRAELAILVPELLLIGQLIDRSGMAWCIQAFGREEMLQIAIEEWAAASPIY  60

Query  61   TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEP  120
            TKRMQ+ALNF GDDVPTIFKGLQLDIGAPPQFMDFRFT+HDRWHGEF LDHCGALLDVEP
Sbjct  61   TKRMQQALNFAGDDVPTIFKGLQLDIGAPPQFMDFRFTIHDRWHGEFRLDHCGALLDVEP  120

Query  121  MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE  180
            MGD+YV GMCHTIEDPTFDATA+ATNPRAQVRPIHRPPR P DRHPHCAWTV+IDES+P 
Sbjct  121  MGDEYVFGMCHTIEDPTFDATAVATNPRAQVRPIHRPPRVPPDRHPHCAWTVVIDESHPA  180

Query  181  AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCL  240
            A GIPALD V ++KAA+WEL  +D +DDGL DY+GPL+SDLDFGAFSHSALVR+ADE+CL
Sbjct  181  ARGIPALDVVAQSKAASWELAAIDPADDGLADYAGPLLSDLDFGAFSHSALVRVADEICL  240

Query  241  QMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL  300
            QMHLL LSFAIAV KRA AD +LA S+ TRQLIG+AGL AERIHRA+ALP GI+G L V 
Sbjct  241  QMHLLYLSFAIAVGKRAGADTELARSIGTRQLIGIAGLAAERIHRALALPAGIDGVLRVF  300

Query  301  ELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVR  360
            ELHPL NPAGY+ AE + DRL++H SP H D AWISLCTP S QPLQAIATAVDPH+ VR
Sbjct  301  ELHPLFNPAGYIEAEITGDRLLLHRSPGHDDAAWISLCTPESGQPLQAIATAVDPHVAVR  360

Query  361  ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLT  407
            + GT+T+WTAEL +A+ PASELPEVLVAKVS GS F F+PRRSLPLT
Sbjct  361  VGGTNTEWTAELAKAETPASELPEVLVAKVSGGSSFVFQPRRSLPLT  407


>gi|41409897|ref|NP_962733.1| hypothetical protein MAP3799 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41398730|gb|AAS06349.1| hypothetical protein MAP_3799 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=408

 Score =  676 bits (1745),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 327/408 (81%), Positives = 362/408 (89%), Gaps = 1/408 (0%)

Query  1    MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY  60
            M+QS YA LSRSELAVL+PELLLIGQ++DRSGMAWCI +FGR EM+QIAIEEWAGASPIY
Sbjct  1    MAQSPYARLSRSELAVLVPELLLIGQMMDRSGMAWCISSFGRDEMVQIAIEEWAGASPIY  60

Query  61   TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEP  120
            T+RMQ+AL +EGDDV TIFKGLQLDIGAPPQFMDFR+T+HDRWHGEF LDHCGALLDVEP
Sbjct  61   TRRMQRALGYEGDDVITIFKGLQLDIGAPPQFMDFRYTVHDRWHGEFQLDHCGALLDVEP  120

Query  121  MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE  180
            MG DYV GMCHTIEDPTFDATA+ATNPRAQVRPIHRPPR+PADRHPHCAWTVIIDESYPE
Sbjct  121  MGPDYVFGMCHTIEDPTFDATAVATNPRAQVRPIHRPPREPADRHPHCAWTVIIDESYPE  180

Query  181  AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCL  240
            A+ IPAL  VR+T+AA WELD +DASD+G+ DYSGPL+SDLDFGAFSHSALVR+ADEVCL
Sbjct  181  AQPIPALHIVRQTRAAGWELDPIDASDEGMADYSGPLLSDLDFGAFSHSALVRIADEVCL  240

Query  241  QMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL  300
            QMHLL LSFAIAVRKRA  DA+ A+SV TR L GVAGL AERIHRA+   GGI+  L VL
Sbjct  241  QMHLLYLSFAIAVRKRAADDAE-AVSVCTRGLTGVAGLAAERIHRAVGSGGGIDAVLRVL  299

Query  301  ELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVR  360
            ELHPLLNPAGYV++E + +RL+VH SPAH D AWISLC+P SVQPLQAIATAV+P + VR
Sbjct  300  ELHPLLNPAGYVVSEIAGNRLLVHRSPAHEDAAWISLCSPGSVQPLQAIATAVNPRIGVR  359

Query  361  ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTV  408
            +SGTDTDWTAE +E D  A ELPEV V KVS GS FQFEPRRSLPLTV
Sbjct  360  VSGTDTDWTAEFVETDTDADELPEVSVTKVSGGSTFQFEPRRSLPLTV  407


>gi|336460241|gb|EGO39144.1| hypothetical protein MAPs_42690 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=408

 Score =  676 bits (1744),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 327/408 (81%), Positives = 362/408 (89%), Gaps = 1/408 (0%)

Query  1    MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY  60
            M+QS YA LSRSELAVL+PELLLIGQ++DRSGMAWCI +FGR EM+QIAIEEWAGASPIY
Sbjct  1    MAQSPYARLSRSELAVLVPELLLIGQMMDRSGMAWCISSFGRDEMVQIAIEEWAGASPIY  60

Query  61   TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEP  120
            T+RMQ+AL +EGDDV TIFKGLQLDIGAPPQFMDFR+T+HDRWHGEF LDHCGALLDVEP
Sbjct  61   TRRMQRALGYEGDDVITIFKGLQLDIGAPPQFMDFRYTVHDRWHGEFQLDHCGALLDVEP  120

Query  121  MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE  180
            MG DYV GMCHTIEDPTFDATA+ATNPRAQVRPIHRPPR+PADRHPHCAWTVIIDESYPE
Sbjct  121  MGPDYVFGMCHTIEDPTFDATAVATNPRAQVRPIHRPPREPADRHPHCAWTVIIDESYPE  180

Query  181  AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCL  240
            A+ IPAL  VR+T+AA WELD +DASD+G+ DYSGPL+SDLDFGAFSHSALVR+ADEVCL
Sbjct  181  AQPIPALHIVRQTRAAGWELDPIDASDEGMADYSGPLLSDLDFGAFSHSALVRIADEVCL  240

Query  241  QMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL  300
            QMHLL LSFAIAVRKRA  DA+ A+SV TR L GVAGL AERIHRA+   GGI+  L VL
Sbjct  241  QMHLLYLSFAIAVRKRAADDAE-AVSVCTRGLTGVAGLAAERIHRAVGSGGGIDAVLRVL  299

Query  301  ELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVR  360
            ELHPLLNPAGYV++E + +RL+VH SPAH D AWISLC+P SVQPLQAIATAV+P + VR
Sbjct  300  ELHPLLNPAGYVVSEIAGNRLLVHRSPAHDDAAWISLCSPGSVQPLQAIATAVNPRIGVR  359

Query  361  ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTV  408
            +SGTDTDWTAE +E D  A ELPEV V KVS GS FQFEPRRSLPLTV
Sbjct  360  VSGTDTDWTAEFVETDTDADELPEVSVTKVSGGSTFQFEPRRSLPLTV  407


>gi|118465398|ref|YP_883973.1| hypothetical protein MAV_4850 [Mycobacterium avium 104]
 gi|118166685|gb|ABK67582.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=408

 Score =  672 bits (1733),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 324/408 (80%), Positives = 361/408 (89%), Gaps = 1/408 (0%)

Query  1    MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY  60
            M+QS YA LSRSELAVL+PELLLIGQ++DRSGMAWCI +FGR EM+QIAIEEWAGASPIY
Sbjct  1    MAQSPYARLSRSELAVLVPELLLIGQMMDRSGMAWCISSFGRDEMVQIAIEEWAGASPIY  60

Query  61   TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEP  120
            T+RMQ+AL +EGDDV TIFKGLQLDIGAPPQFMDFR+T+HDRWHGEF LDHCGALLDVEP
Sbjct  61   TRRMQRALGYEGDDVITIFKGLQLDIGAPPQFMDFRYTVHDRWHGEFQLDHCGALLDVEP  120

Query  121  MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE  180
            MG DYV GMCHTIEDPTFDATA+ATNPRAQVRPIHRPPR+PADRHPHCAWTVIIDESYPE
Sbjct  121  MGPDYVFGMCHTIEDPTFDATAVATNPRAQVRPIHRPPREPADRHPHCAWTVIIDESYPE  180

Query  181  AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCL  240
            A+ IPAL  VR+T+AA WELD +DASD+G+ DYSGPL+SDLDFGAFSHSALVR+ADEVCL
Sbjct  181  AQPIPALHIVRQTRAAGWELDPIDASDEGMADYSGPLLSDLDFGAFSHSALVRIADEVCL  240

Query  241  QMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL  300
            QMHLL LSF+IAVRKRA  DA+ A+SV TR L GVAGL AERI RA+   GGI+  L VL
Sbjct  241  QMHLLYLSFSIAVRKRAADDAE-AVSVCTRGLTGVAGLAAERIQRAVGSGGGIDAVLRVL  299

Query  301  ELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVR  360
            ELHPLLNPAGYV++E + +RL+VH SPAH D AWISLC+P SVQPLQAIATAV+P + +R
Sbjct  300  ELHPLLNPAGYVVSEIAGNRLLVHRSPAHDDAAWISLCSPGSVQPLQAIATAVNPRIGMR  359

Query  361  ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTV  408
            +SGTDTDWTAE +E D  A ELPEV V KVS GS FQFEPRRSLPLTV
Sbjct  360  VSGTDTDWTAEFVETDTDADELPEVSVTKVSGGSTFQFEPRRSLPLTV  407


>gi|254777290|ref|ZP_05218806.1| hypothetical protein MaviaA2_21836 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=408

 Score =  672 bits (1733),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 325/408 (80%), Positives = 360/408 (89%), Gaps = 1/408 (0%)

Query  1    MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY  60
            M+QS YA LSRSELAVL+PELLLIGQ++DRSGMAWCI +FGR EM+QIAIEEWAGASPIY
Sbjct  1    MAQSPYARLSRSELAVLVPELLLIGQMMDRSGMAWCISSFGRDEMVQIAIEEWAGASPIY  60

Query  61   TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEP  120
            T+RMQ+AL +EGDDV TIFKGLQLDIGAPPQFMDFR+T+HDRWHGEF LDHCGALLDVEP
Sbjct  61   TRRMQRALGYEGDDVITIFKGLQLDIGAPPQFMDFRYTVHDRWHGEFQLDHCGALLDVEP  120

Query  121  MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE  180
            MG DYV GMCHTIEDPTFDATA+ATNPRAQVRPIHRPPR+PADRHPHCAWTVIIDESYPE
Sbjct  121  MGPDYVFGMCHTIEDPTFDATAVATNPRAQVRPIHRPPREPADRHPHCAWTVIIDESYPE  180

Query  181  AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCL  240
            A+ IPAL  V +T+AA WELD +DASD+G+ DYSGPL+SDLDFGAFSHSALVR+ADEVCL
Sbjct  181  AQPIPALHIVGQTRAAGWELDPIDASDEGMADYSGPLLSDLDFGAFSHSALVRIADEVCL  240

Query  241  QMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL  300
            QMHLL LSFAIAVRKRA  DA+ A+SV TR L GVAGL AERIHRA+   GGI+  L VL
Sbjct  241  QMHLLYLSFAIAVRKRAADDAE-AVSVCTRGLTGVAGLAAERIHRAVGSGGGIDAVLRVL  299

Query  301  ELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVR  360
            ELHPLLNPAGYV++E + +RL+VH SPAH D AWISLC+P SVQPLQAIATA +P + VR
Sbjct  300  ELHPLLNPAGYVVSEIAGNRLLVHRSPAHDDAAWISLCSPGSVQPLQAIATAANPRIGVR  359

Query  361  ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTV  408
            +SGTDTDWTAE +E D  A ELPEV V KVS GS FQFEPRRSLPLTV
Sbjct  360  VSGTDTDWTAEFVETDTDADELPEVSVTKVSGGSTFQFEPRRSLPLTV  407


>gi|296167657|ref|ZP_06849928.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295897124|gb|EFG76736.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=407

 Score =  657 bits (1695),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 323/408 (80%), Positives = 355/408 (88%), Gaps = 2/408 (0%)

Query  1    MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY  60
            MS+SRYA L+R +LAVL+PELLLIGQLIDRSGMAWCI AFGR EM+QIAIEEWAGASPIY
Sbjct  1    MSRSRYARLTREQLAVLVPELLLIGQLIDRSGMAWCISAFGRDEMVQIAIEEWAGASPIY  60

Query  61   TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEP  120
            T+RMQ+ALNF GDDVPTIFKGLQLDIGAPPQFMDFR+T+HDRWHGEF LDHCGALLDVEP
Sbjct  61   TRRMQRALNFTGDDVPTIFKGLQLDIGAPPQFMDFRYTVHDRWHGEFQLDHCGALLDVEP  120

Query  121  MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE  180
            MG+ YV GMCHTIEDPTFDATA+ATNPRAQVRPIHRPPR PADR PHCAWTVIIDES+PE
Sbjct  121  MGEKYVFGMCHTIEDPTFDATAVATNPRAQVRPIHRPPRTPADRRPHCAWTVIIDESHPE  180

Query  181  AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCL  240
            A+ IPALD VR+T+AA WELD +D S++G  DYSGPL+SD DF  FSHSALVRMADEVCL
Sbjct  181  AQSIPALDIVRQTRAAAWELDPIDRSEEGKADYSGPLLSDFDFAGFSHSALVRMADEVCL  240

Query  241  QMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL  300
            QMHLL LSFAIAV +   AD   A+SV T+ L G+AG+ AERIHRA+ LPGG  G L VL
Sbjct  241  QMHLLYLSFAIAV-RARAADDAQAVSVCTQGLTGIAGVAAERIHRALELPGGARGVLEVL  299

Query  301  ELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVR  360
            ELHPLLNPAGYV AET+ DRLVVH SPAH D AWI+LCTP S QPLQAIATAVDPHL+VR
Sbjct  300  ELHPLLNPAGYVRAETA-DRLVVHRSPAHDDAAWIALCTPESTQPLQAIATAVDPHLEVR  358

Query  361  ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTV  408
            +SGT+T+WTAEL E D  A ELPEV V KVS G+ FQFEPRRSLPLTV
Sbjct  359  VSGTNTEWTAELAETDTAAPELPEVSVTKVSGGATFQFEPRRSLPLTV  406


>gi|342859212|ref|ZP_08715866.1| hypothetical protein MCOL_10048 [Mycobacterium colombiense CECT 
3035]
 gi|342133453|gb|EGT86656.1| hypothetical protein MCOL_10048 [Mycobacterium colombiense CECT 
3035]
Length=409

 Score =  653 bits (1684),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 323/407 (80%), Positives = 355/407 (88%), Gaps = 1/407 (0%)

Query  2    SQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYT  61
            S SRYA LSR EL VL+PELLLIGQLIDRSGMAWCI +FGR EM+QIAIEEWAG+SPIYT
Sbjct  3    SPSRYAQLSRDELVVLVPELLLIGQLIDRSGMAWCISSFGRDEMVQIAIEEWAGSSPIYT  62

Query  62   KRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEPM  121
            +RMQKALN+EG+DVPTIFKGLQLDIGAPPQFMDFR+T+HDRWHGEF LDHCGALLDVEPM
Sbjct  63   RRMQKALNYEGNDVPTIFKGLQLDIGAPPQFMDFRYTVHDRWHGEFQLDHCGALLDVEPM  122

Query  122  GDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPEA  181
            G+ YV GMCHTIEDPTFDATAIATNPRAQVRPIHRPPR PADRHPHCAWTVIIDESYPEA
Sbjct  123  GEQYVFGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRTPADRHPHCAWTVIIDESYPEA  182

Query  182  EGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCLQ  241
            + IPALD V  T+AATWELD +D SD+G  DYSGPL+SD DF AFSHSALVRMADEVCLQ
Sbjct  183  QSIPALDIVGRTRAATWELDPIDPSDEGQADYSGPLLSDFDFAAFSHSALVRMADEVCLQ  242

Query  242  MHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVLE  301
            MHLL LSF IAVR RA  D + A+SV T+ L G+AG+ AERIHRA+ LPGG EG L VLE
Sbjct  243  MHLLYLSFVIAVRARAANDDE-AVSVCTKGLTGIAGVAAERIHRALKLPGGAEGVLRVLE  301

Query  302  LHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVRI  361
            LHPLLNPAGYV+AET  +RL VH SPAH D +WISLC+P SVQPLQAIATAV+P ++VR+
Sbjct  302  LHPLLNPAGYVVAETESNRLHVHPSPAHDDESWISLCSPGSVQPLQAIATAVEPRIEVRV  361

Query  362  SGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTV  408
            SGT  DWTAEL+E D P+ ELPEV V +VS GS FQFEPRRSLPLTV
Sbjct  362  SGTAADWTAELVETDTPSEELPEVSVVRVSGGSTFQFEPRRSLPLTV  408


>gi|254821589|ref|ZP_05226590.1| hypothetical protein MintA_16767 [Mycobacterium intracellulare 
ATCC 13950]
Length=409

 Score =  643 bits (1659),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 326/407 (81%), Positives = 356/407 (88%), Gaps = 1/407 (0%)

Query  2    SQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYT  61
            S SRYA LSR EL VL+PELLLIGQLIDRSGMAWCI +FGR EM+QIAIEEWAGASPIYT
Sbjct  3    SPSRYAQLSRDELVVLVPELLLIGQLIDRSGMAWCISSFGRDEMVQIAIEEWAGASPIYT  62

Query  62   KRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEPM  121
            +RMQKALN+EGDDVPTIFKGLQLDIGAPPQFMDFR+T+HDRWHGEF LDHCGALLDVEPM
Sbjct  63   RRMQKALNYEGDDVPTIFKGLQLDIGAPPQFMDFRYTVHDRWHGEFQLDHCGALLDVEPM  122

Query  122  GDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPEA  181
            G+ YV GMCHTIEDPTFDATAIATNPRAQVRPIHRPPR PADRHPHCAWTVIIDESYPEA
Sbjct  123  GEQYVFGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRTPADRHPHCAWTVIIDESYPEA  182

Query  182  EGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCLQ  241
            + IPAL+ V +T+AATWELD +D SD+G  DYSGPL+SD DF AFSHSALVRMADEVCLQ
Sbjct  183  QAIPALEVVSQTRAATWELDPIDRSDEGQADYSGPLLSDFDFAAFSHSALVRMADEVCLQ  242

Query  242  MHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVLE  301
            MHLL LSFAIAV  RA  D + ++ V TR LIG+AG+ AERIHRA+ LPGG EG L VLE
Sbjct  243  MHLLYLSFAIAVAARAAGDDE-SLGVCTRGLIGIAGVAAERIHRALKLPGGAEGVLRVLE  301

Query  302  LHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVRI  361
            LHPLLNPAGYV+AET  +RL V  SPAH D AWISLC+P SVQPLQAIATAVDP ++VR+
Sbjct  302  LHPLLNPAGYVVAETESNRLHVRPSPAHDDRAWISLCSPESVQPLQAIATAVDPRIEVRV  361

Query  362  SGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTV  408
            SGT TDWTAEL+E D+P  ELPEV V +VS GS FQFEPRRSLPLTV
Sbjct  362  SGTATDWTAELVETDSPTEELPEVSVVRVSGGSTFQFEPRRSLPLTV  408


>gi|333988953|ref|YP_004521567.1| hypothetical protein JDM601_0313 [Mycobacterium sp. JDM601]
 gi|333484921|gb|AEF34313.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=408

 Score =  619 bits (1597),  Expect = 2e-175, Method: Compositional matrix adjust.
 Identities = 295/408 (73%), Positives = 338/408 (83%), Gaps = 1/408 (0%)

Query  1    MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY  60
            M++SRYA LSR ELAVL+PELLLIG +IDRSGMAWCIQ FGR+EMLQIAIEEWAG+SP+Y
Sbjct  1    MTESRYASLSRDELAVLVPELLLIGHMIDRSGMAWCIQEFGREEMLQIAIEEWAGSSPVY  60

Query  61   TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEP  120
            T+RMQ+AL + GDDVPTIFKGLQ DIG+PPQFMDFRFT+HDRW+GEF L  CGALLDVEP
Sbjct  61   TQRMQRALGYVGDDVPTIFKGLQFDIGSPPQFMDFRFTVHDRWNGEFELASCGALLDVEP  120

Query  121  MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE  180
            MG+DYV GMCHTIEDPTFDATA+ATN +AQ RP+HRPPR PADR PHC WTVIIDESYP+
Sbjct  121  MGEDYVFGMCHTIEDPTFDATAVATNVKAQCRPVHRPPRTPADRQPHCCWTVIIDESYPD  180

Query  181  AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCL  240
            A+ IPAL  + ET AATW+L  +D + +GL DY+GPL+SD+DF AFSHSALVR+ADEVCL
Sbjct  181  AQPIPALAVISETNAATWQLGEIDPAAEGLSDYTGPLLSDVDFTAFSHSALVRIADEVCL  240

Query  241  QMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL  300
            QMHLL LSFA+AVR RA  D +LA+SV  RQL G+AGLGA RI  AM L   I GAL   
Sbjct  241  QMHLLYLSFALAVRARADTD-ELAVSVGRRQLTGLAGLGAMRIKDAMRLSDDIAGALRTF  299

Query  301  ELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVR  360
            ELHPLLNPAGYV AE   DR+ V  SPAH DGAWISLC+PA V PLQAIATAV+P L+V 
Sbjct  300  ELHPLLNPAGYVRAEIGEDRIAVRRSPAHDDGAWISLCSPAEVNPLQAIATAVNPLLRVS  359

Query  361  ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTV  408
            + G+D +WTA+L E D  A ELPEV+V KVS G+ FQF  R+SLPLTV
Sbjct  360  VGGSDDEWTAQLTETDTEAKELPEVMVTKVSGGATFQFRTRKSLPLTV  407


>gi|118472148|ref|YP_890082.1| hypothetical protein MSMEG_5855 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118173435|gb|ABK74331.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=408

 Score =  612 bits (1578),  Expect = 3e-173, Method: Compositional matrix adjust.
 Identities = 292/405 (73%), Positives = 333/405 (83%), Gaps = 0/405 (0%)

Query  4    SRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYTKR  63
            SR+A L+R ELA L+PELLL+GQ+IDRSGMAWCI  FGR+EM+QIAIEEWA +SPIYTKR
Sbjct  3    SRFARLTRDELATLVPELLLMGQMIDRSGMAWCISNFGREEMVQIAIEEWAASSPIYTKR  62

Query  64   MQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEPMGD  123
            MQ+AL +EG DV TIFKG+QLDIGAPPQFMDFR+T+HDRWHGEFHLDHCGALLDVEPMGD
Sbjct  63   MQRALGYEGVDVITIFKGMQLDIGAPPQFMDFRYTVHDRWHGEFHLDHCGALLDVEPMGD  122

Query  124  DYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPEAEG  183
            +YV GMCH IEDPTFDATA+ATN R +VRPIHRPPR PADRHPHCAWTV IDES+PE + 
Sbjct  123  EYVRGMCHDIEDPTFDATALATNRRCRVRPIHRPPRTPADRHPHCAWTVTIDESFPEVDF  182

Query  184  IPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCLQMH  243
            IPALD +  T+AA  ELD +D  D+G  DYSGPLVSDLDF AFSHSALVR+ADEVCLQMH
Sbjct  183  IPALDVIGRTRAAQLELDPIDPDDEGHADYSGPLVSDLDFSAFSHSALVRIADEVCLQMH  242

Query  244  LLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVLELH  303
            LLNLSFA+AV  RA AD  LA  + T+QLIGVAGLGAERIHRA+ LPGGIEGA+ VLELH
Sbjct  243  LLNLSFALAVGARAGADTALATEICTKQLIGVAGLGAERIHRALDLPGGIEGAVRVLELH  302

Query  304  PLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVRISG  363
            P+ NPA YV AE  PD + V  S AH D AWI+L  PA  +PLQA+  AVDPHL V + G
Sbjct  303  PMFNPAAYVSAEFGPDTVSVQRSAAHEDRAWIALTGPAETRPLQAVVAAVDPHLDVEVVG  362

Query  364  TDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTV  408
            TD  W+A ++E    A E  EV VAK+S G+ F+F+PRRSLPLTV
Sbjct  363  TDEHWSARIVETATAAKEFGEVAVAKISGGASFEFQPRRSLPLTV  407


>gi|126437522|ref|YP_001073213.1| hypothetical protein Mjls_4957 [Mycobacterium sp. JLS]
 gi|126237322|gb|ABO00723.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=408

 Score =  605 bits (1560),  Expect = 5e-171, Method: Compositional matrix adjust.
 Identities = 291/405 (72%), Positives = 334/405 (83%), Gaps = 0/405 (0%)

Query  4    SRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYTKR  63
            SRYA LSR ELA L+PELLLIGQLIDRSGMAWCI  FGR+EMLQIAIEEWAGASP+YTKR
Sbjct  3    SRYAALSREELATLVPELLLIGQLIDRSGMAWCISNFGREEMLQIAIEEWAGASPLYTKR  62

Query  64   MQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEPMGD  123
            MQKAL +EG DV TIFKGLQLDIGAPPQFMDFR+T+HDRWHGEFHLDHCGALLDVEPMG+
Sbjct  63   MQKALKYEGVDVITIFKGLQLDIGAPPQFMDFRYTVHDRWHGEFHLDHCGALLDVEPMGE  122

Query  124  DYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPEAEG  183
            DYV GMCH IEDPTFDATA+ATN R QVRPIHRPPR PADRHPHC WTVIIDESYPE + 
Sbjct  123  DYVRGMCHDIEDPTFDATALATNRRCQVRPIHRPPRTPADRHPHCRWTVIIDESYPEVDF  182

Query  184  IPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCLQMH  243
            IP LD V  ++A   +L+ +D  D+G+ DYSGPL+SD+DFGAFSHSALVR+ADEVCLQMH
Sbjct  183  IPQLDIVSASRAYNTDLEPIDPDDEGMSDYSGPLLSDVDFGAFSHSALVRIADEVCLQMH  242

Query  244  LLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVLELH  303
            LL LSF +AV  RAK D  LA ++ T+QLIG+AG+ AERI +A+ L   ++GAL VLELH
Sbjct  243  LLVLSFNLAVAARAKDDPALARTIRTKQLIGIAGVAAERIRKALNLSKDVKGALRVLELH  302

Query  304  PLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVRISG  363
            PLLNPA YV A+  P  L V +SPAH DG+WISL +PA+  PLQAI  AVDPHL+  +SG
Sbjct  303  PLLNPAAYVWADVDPGFLHVRSSPAHEDGSWISLVSPAADLPLQAIVQAVDPHLRAEVSG  362

Query  364  TDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTV  408
            T++DWT  +IE D  A ELPEV V K S G+ ++FE R+SLPLTV
Sbjct  363  TESDWTVRVIETDTAAKELPEVEVCKFSGGASWEFEDRKSLPLTV  407


>gi|108801537|ref|YP_641734.1| hypothetical protein Mmcs_4574 [Mycobacterium sp. MCS]
 gi|119870691|ref|YP_940643.1| hypothetical protein Mkms_4662 [Mycobacterium sp. KMS]
 gi|108771956|gb|ABG10678.1| conserved hypothetical protein [Mycobacterium sp. MCS]
 gi|119696780|gb|ABL93853.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=408

 Score =  602 bits (1553),  Expect = 3e-170, Method: Compositional matrix adjust.
 Identities = 290/405 (72%), Positives = 333/405 (83%), Gaps = 0/405 (0%)

Query  4    SRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYTKR  63
            SRYA LSR ELA L+PELLLIGQLIDRSGMAWCI  FGR+EMLQIAIEEWAGASP+YTKR
Sbjct  3    SRYAALSREELATLVPELLLIGQLIDRSGMAWCISNFGREEMLQIAIEEWAGASPLYTKR  62

Query  64   MQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEPMGD  123
            MQKAL +EG DV TIFKGLQLDIGAPPQFMDFR+T+HDRWHGEFHLDHCGALLDVEPMG+
Sbjct  63   MQKALKYEGVDVITIFKGLQLDIGAPPQFMDFRYTVHDRWHGEFHLDHCGALLDVEPMGE  122

Query  124  DYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPEAEG  183
            DYV GMCH IEDPTFDATA+ATN R QVRPIHRPPR PADRHPHC WTVIIDESYPE + 
Sbjct  123  DYVRGMCHDIEDPTFDATALATNRRCQVRPIHRPPRTPADRHPHCRWTVIIDESYPEVDF  182

Query  184  IPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCLQMH  243
            IP LD V  ++A   +L+ +D  D+G+ DYSGPL+SD+DFGAFSHSALVR+ADEVCLQMH
Sbjct  183  IPQLDIVSASRAYNTDLEPIDPDDEGMSDYSGPLLSDVDFGAFSHSALVRIADEVCLQMH  242

Query  244  LLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVLELH  303
            LL LSF +AV  RAK D  LA ++ T+QLIG+AG+ AERI +A+ L   ++GAL VLELH
Sbjct  243  LLVLSFNLAVAARAKDDPALARTIRTKQLIGIAGVAAERIRKALNLSKDVKGALRVLELH  302

Query  304  PLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVRISG  363
            PLLNPA YV A+  P  L V +SPAH DG+WISL +PA+  PLQAI  AVDPHL+  +SG
Sbjct  303  PLLNPAAYVWADVDPGFLHVRSSPAHEDGSWISLVSPAADLPLQAIVQAVDPHLRAEVSG  362

Query  364  TDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTV  408
             ++DWT  +IE D  A ELPEV V K S G+ ++FE R+SLPLTV
Sbjct  363  LESDWTVRVIETDTAAKELPEVEVCKFSGGASWEFEDRKSLPLTV  407


>gi|120406101|ref|YP_955930.1| hypothetical protein Mvan_5153 [Mycobacterium vanbaalenii PYR-1]
 gi|119958919|gb|ABM15924.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=411

 Score =  599 bits (1545),  Expect = 2e-169, Method: Compositional matrix adjust.
 Identities = 284/407 (70%), Positives = 332/407 (82%), Gaps = 0/407 (0%)

Query  2    SQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYT  61
            + SRYA LSR+ELA L+PELLLIGQLIDRSGMAWCI  FGR+EMLQIAIEEWAG+SP+YT
Sbjct  4    TTSRYAALSRAELATLVPELLLIGQLIDRSGMAWCISKFGREEMLQIAIEEWAGSSPLYT  63

Query  62   KRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEPM  121
            KRMQKALN+EG DV T+FKGLQLDIGAPPQFMDFR+T+HDRWHGEFHLDHCGALLDVEPM
Sbjct  64   KRMQKALNYEGVDVITVFKGLQLDIGAPPQFMDFRYTVHDRWHGEFHLDHCGALLDVEPM  123

Query  122  GDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPEA  181
            G+DYV GMCH IEDPTFDATA+ATN + QVRPIHRPPR PADRHPHCAWTVIIDESYPE 
Sbjct  124  GEDYVRGMCHDIEDPTFDATALATNRKCQVRPIHRPPRAPADRHPHCAWTVIIDESYPEV  183

Query  182  EGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCLQ  241
            + +P L+ V  ++A   EL  +D SD+GL DYSGPL+SD+DFGAFSHSALVR+ADEVCLQ
Sbjct  184  DFVPQLEIVAASRAYNTELAPIDPSDEGLADYSGPLLSDVDFGAFSHSALVRIADEVCLQ  243

Query  242  MHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVLE  301
            MHLL LS+ +AVR RA  DA L  S+  + LIG+AG+ AERI  A+ +     GAL VLE
Sbjct  244  MHLLVLSYNLAVRARANGDAALEESIRYKSLIGIAGVAAERIKNALGISADATGALRVLE  303

Query  302  LHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVRI  361
            LHPL+NPA YV  +  PD L V  SPA+ DGAWISL +P +  PLQAIA AV+P+L+  +
Sbjct  304  LHPLMNPAAYVSVDVDPDFLHVRRSPAYEDGAWISLVSPVADLPLQAIAAAVNPYLRAEV  363

Query  362  SGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTV  408
            SGT++DWT  ++E D  A ELPEV V K S G+ ++FE R+SLPLTV
Sbjct  364  SGTESDWTVRVVETDTAAKELPEVEVCKFSGGASWEFENRKSLPLTV  410


>gi|169628315|ref|YP_001701964.1| hypothetical protein MAB_1222 [Mycobacterium abscessus ATCC 19977]
 gi|169240282|emb|CAM61310.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=417

 Score =  593 bits (1529),  Expect = 2e-167, Method: Compositional matrix adjust.
 Identities = 293/405 (73%), Positives = 340/405 (84%), Gaps = 1/405 (0%)

Query  4    SRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYTKR  63
            SR++GLSR +LA+L+PELLLIGQLIDRSGMA+CIQ FGR+EMLQ+AIEEWA +SPIYT+R
Sbjct  13   SRFSGLSRDQLALLVPELLLIGQLIDRSGMAYCIQHFGREEMLQVAIEEWASSSPIYTRR  72

Query  64   MQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEPMGD  123
            MQ+AL FEGDDV TIFKG+QLDIGAPPQFMDFR+T+HD+WHGEFHLDHCGALLDVEP+G 
Sbjct  73   MQRALRFEGDDVITIFKGMQLDIGAPPQFMDFRYTVHDKWHGEFHLDHCGALLDVEPLGP  132

Query  124  DYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPEAEG  183
            DYV GMCH IEDPTFDATA ATNP AQVRPIHRPPR PADRHPHCAWTV IDESYP   G
Sbjct  133  DYVTGMCHDIEDPTFDATAFATNPHAQVRPIHRPPRNPADRHPHCAWTVTIDESYPAVSG  192

Query  184  IPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCLQMH  243
            IPALD V  + AA WELD++D S+ G  DY+GPL+SDLDFGAFSHSALVR+ADE+C+QMH
Sbjct  193  IPALDVVGRSIAAGWELDDIDTSEVGASDYAGPLLSDLDFGAFSHSALVRIADEICVQMH  252

Query  244  LLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVLELH  303
            LL L F+IAVRKRA ADA+LA +V T+QLIG+AG+ A RI +A+ L  G+EG L V++LH
Sbjct  253  LLFLGFSIAVRKRA-ADAELARTVCTQQLIGLAGVAAARIKKALGLSSGVEGVLQVVQLH  311

Query  304  PLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVRISG  363
            PLLNPAGYV AE S  +L V  SPAH D AWISLC PA  +PLQA+ATAVDPH+ V+I+G
Sbjct  312  PLLNPAGYVNAEISGGQLHVWRSPAHEDSAWISLCGPAETRPLQAVATAVDPHVGVQIAG  371

Query  364  TDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTV  408
               DWTA  +E +     LPEV++A VS GS F FEPR+SLPLTV
Sbjct  372  DAQDWTASFVEHEGEDKLLPEVMIANVSGGSRFVFEPRKSLPLTV  416


>gi|145222196|ref|YP_001132874.1| hypothetical protein Mflv_1604 [Mycobacterium gilvum PYR-GCK]
 gi|145214682|gb|ABP44086.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=408

 Score =  592 bits (1525),  Expect = 5e-167, Method: Compositional matrix adjust.
 Identities = 281/405 (70%), Positives = 330/405 (82%), Gaps = 0/405 (0%)

Query  4    SRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYTKR  63
            SRYA LSR ELA L+PELLLIGQLIDRSGMAWCI  FGR+EMLQIAIEEWA ASP+YTKR
Sbjct  3    SRYAALSREELATLVPELLLIGQLIDRSGMAWCISNFGREEMLQIAIEEWAAASPLYTKR  62

Query  64   MQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEPMGD  123
            MQKALN+EG+D+ T+FKGLQLDIGAPPQFMDFR+ +HDRWHGEF+LDHCGALLDVEPMG+
Sbjct  63   MQKALNYEGEDIFTLFKGLQLDIGAPPQFMDFRYVVHDRWHGEFYLDHCGALLDVEPMGE  122

Query  124  DYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPEAEG  183
            DYV GMCH IEDPTFDATA+ATN +AQVRPIHRPPR  +D HPHC WTVIIDESYPE   
Sbjct  123  DYVRGMCHDIEDPTFDATALATNRKAQVRPIHRPPRASSDEHPHCRWTVIIDESYPEVPF  182

Query  184  IPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCLQMH  243
            IPA+D V  ++A   EL  +D  D+G+ DYSGPL+SD+DFGAFSHSALVR+ADEVCLQMH
Sbjct  183  IPAMDIVGASRAHHTELAPIDPDDEGMADYSGPLLSDVDFGAFSHSALVRIADEVCLQMH  242

Query  244  LLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVLELH  303
            LL LSF +AV  RAK DA LA ++ T+QLIG+AG+ AERIH+A+ L    +GAL VLELH
Sbjct  243  LLVLSFTLAVEARAKGDAALARTIRTKQLIGIAGVAAERIHKALKLSRDAKGALRVLELH  302

Query  304  PLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVRISG  363
            PLLNPA YV A+  PD + V  SPA+ DG+WISL +P +  PLQAI  AVDP+L+  +SG
Sbjct  303  PLLNPAAYVYADVDPDFIHVRTSPAYEDGSWISLVSPVADTPLQAIVAAVDPYLRAEVSG  362

Query  364  TDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTV  408
            T++DWT  +I  D PA +L EV V + S G+ + FE R+SLPLTV
Sbjct  363  TESDWTVRVIATDTPAKKLSEVEVTEFSGGAAWVFEDRKSLPLTV  407


>gi|315442635|ref|YP_004075514.1| hypothetical protein Mspyr1_09900 [Mycobacterium sp. Spyr1]
 gi|315260938|gb|ADT97679.1| hypothetical protein Mspyr1_09900 [Mycobacterium sp. Spyr1]
Length=408

 Score =  588 bits (1515),  Expect = 6e-166, Method: Compositional matrix adjust.
 Identities = 279/405 (69%), Positives = 329/405 (82%), Gaps = 0/405 (0%)

Query  4    SRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYTKR  63
            SRYA LSR ELA L+PELLLIGQLIDRSGMAWCI  FGR+EMLQIAIEEWA ASP+YTKR
Sbjct  3    SRYAALSREELATLVPELLLIGQLIDRSGMAWCISNFGREEMLQIAIEEWAAASPLYTKR  62

Query  64   MQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEPMGD  123
            MQKALN+EG+D+ T+FKGLQLDIGAPPQFMDFR+ +HDRWHGEF+LDHCGALLDVEPMG+
Sbjct  63   MQKALNYEGEDIFTLFKGLQLDIGAPPQFMDFRYVVHDRWHGEFYLDHCGALLDVEPMGE  122

Query  124  DYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPEAEG  183
            DYV GMCH IEDPTF ATA+ATN +AQVRP+HRPPR  +D HPHC WTVIIDESYPE   
Sbjct  123  DYVRGMCHDIEDPTFAATALATNRKAQVRPVHRPPRASSDEHPHCRWTVIIDESYPEVPF  182

Query  184  IPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCLQMH  243
            IPA+D V  ++A   EL  +D  D+G+ DYSGPL+SD+DFGAFSHSALVR+ADEVCLQMH
Sbjct  183  IPAMDIVGASRAHHTELAPIDPDDEGMADYSGPLLSDVDFGAFSHSALVRIADEVCLQMH  242

Query  244  LLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVLELH  303
            LL LSF +AV  RAK DA LA ++ T+QLIG+AG+ AERIH+A+ L    +GAL VLELH
Sbjct  243  LLVLSFTLAVEARAKGDAALARTIRTKQLIGIAGVAAERIHKALKLSRDAKGALRVLELH  302

Query  304  PLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVRISG  363
            PLLNPA YV A+  PD + V  SPA+ DG+WISL +P +  PLQAI  AVDP+L+  +SG
Sbjct  303  PLLNPAAYVYADVDPDFIHVRTSPAYEDGSWISLVSPVADTPLQAIVAAVDPYLRAEVSG  362

Query  364  TDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLTV  408
            T++DWT  +I  D PA +L EV V + S G+ + FE R+SLPLTV
Sbjct  363  TESDWTVRVIATDTPAKKLSEVEVTEFSGGAAWVFEDRKSLPLTV  407


>gi|326331680|ref|ZP_08197968.1| hypothetical protein NBCG_03119 [Nocardioidaceae bacterium Broad-1]
 gi|325950479|gb|EGD42531.1| hypothetical protein NBCG_03119 [Nocardioidaceae bacterium Broad-1]
Length=414

 Score =  502 bits (1292),  Expect = 5e-140, Method: Compositional matrix adjust.
 Identities = 253/411 (62%), Positives = 300/411 (73%), Gaps = 8/411 (1%)

Query  4    SRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYTKR  63
            SRYA L+R ELA +  ELLLIGQLIDR+GMAWCI AFGR+EML+IAI EWA ASPIYT+R
Sbjct  3    SRYADLTREELAEVGRELLLIGQLIDRAGMAWCISAFGREEMLRIAIVEWAAASPIYTRR  62

Query  64   MQKALNFE-----GDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDV  118
            MQ AL +        DVPTIFKGLQLDIGAPPQFMDFR+T+HD  HGEFHLDHCGAL+DV
Sbjct  63   MQAALGYAPAVPGQGDVPTIFKGLQLDIGAPPQFMDFRYTVHDARHGEFHLDHCGALMDV  122

Query  119  EPMGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESY  178
            EPMG++YV GMCH IEDPTFDATAIAT+PRAQVRP+HRPPR PADR PHC WTV+ID+++
Sbjct  123  EPMGEEYVRGMCHDIEDPTFDATAIATHPRAQVRPVHRPPRTPADRTPHCRWTVVIDDAH  182

Query  179  PEAEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEV  238
            PEA  IP L     ++AA  EL  +D +DDG  DY+GPLVSDLD  AFS SAL R+ADEV
Sbjct  183  PEAVAIPELAVNERSRAAGLELAPIDPADDGAADYAGPLVSDLDLAAFSRSALARIADEV  242

Query  239  CLQMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALG  298
            CLQM LL+  F +A+  RA +  QL + +  +QL+GVAG+   R+ RA+ LP   +GAL 
Sbjct  243  CLQMALLDRGFTLALEPRATSPEQL-LDIRRKQLVGVAGIAGARLARALDLPPDTKGALR  301

Query  299  VLELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLK  358
            +L LHP+LNPA YV  E   D LVV   PA  DGAW+SL  P    PLQA   A+DPHL 
Sbjct  302  LLALHPMLNPAAYVSVEVGADALVVRPGPADEDGAWVSLIGPEWFVPLQAAVQALDPHLD  361

Query  359  VRIS--GTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRSLPLT  407
            V ++  G    W  E++    PA E  EV V + S G+ F FEPRRSLP+T
Sbjct  362  VEVTSEGAGPGWRVEVVRRPEPAPEASEVAVVRFSTGADFAFEPRRSLPIT  412


>gi|254818479|ref|ZP_05223480.1| hypothetical protein MintA_01074 [Mycobacterium intracellulare 
ATCC 13950]
Length=375

 Score =  455 bits (1170),  Expect = 6e-126, Method: Compositional matrix adjust.
 Identities = 222/376 (60%), Positives = 271/376 (73%), Gaps = 2/376 (0%)

Query  33   MAWCIQAFGRQEMLQIAIEEWAGASPIYTKRMQKALNFEGDDVPTIFKGLQLDIGAPPQF  92
            M WCI+ FGR+ M QIAI+EW  ASPIY KR+Q+AL+FEGDDV TIFK +Q DIGAPPQ+
Sbjct  1    MPWCIKEFGREVMEQIAIDEWMLASPIYAKRIQQALDFEGDDVVTIFKAMQFDIGAPPQY  60

Query  93   MDFRFTLHDRWHGEFHLDHCGALLDVEPMGDDYVVGMCHTIEDPTFDATAIATNPRAQVR  152
            MDFR+ +HDR+HGEF L+HCG+LL++EPMG D+V GMCHTIEDPTFDATAIATNPRAQ+R
Sbjct  61   MDFRYVVHDRYHGEFFLNHCGSLLNLEPMGADFVQGMCHTIEDPTFDATAIATNPRAQMR  120

Query  153  PIHRPPRKPADRHPHCAWTVIIDESYPEAEGIPALDAVRETKAATWELDNVDASDDGLVD  212
            PIHRPPR P+DRHPHCAWTVIID++ P       LD +R T+ A  +LD++D+S+ G  D
Sbjct  121  PIHRPPRVPSDRHPHCAWTVIIDDANPAVPEPAGLDDMRRTRVANLKLDSIDSSEPGNSD  180

Query  213  YSGPLVSDLDFGAFSHSALVRMADEVCLQMHLLNLSFAIAVRKRAKADAQLAISVNTRQL  272
            YSGPL+ D+DF  FSHSALVR+ADE C+QMHLL L FA AV KR   D   A S+  +QL
Sbjct  181  YSGPLLGDIDFSGFSHSALVRLADETCIQMHLLYLGFARAVAKR--TDPVTAASICLKQL  238

Query  273  IGVAGLGAERIHRAMALPGGIEGALGVLELHPLLNPAGYVLAETSPDRLVVHNSPAHADG  332
             G   + AER+   M LP   +GAL  LELHPL NPA YV A    D+L ++ S AH D 
Sbjct  239  TGFGAVTAERLRIGMQLPTTTQGALQALELHPLFNPADYVSASRDGDQLHLNASLAHQDR  298

Query  333  AWISLCTPASVQPLQAIATAVDPHLKVRISGTDTDWTAELIEADAPASELPEVLVAKVSR  392
            AW+ L  P  V+PLQAI  A+DP   V +SG+  DWT  +     P  E  EV +AK+  
Sbjct  299  AWVDLIGPHEVRPLQAIVRAIDPTTDVEVSGSQQDWTLRVTSGHQPTPEPREVAMAKIGD  358

Query  393  GSVFQFEPRRSLPLTV  408
            G  ++FE R SLPLTV
Sbjct  359  GLSWRFEERASLPLTV  374


>gi|167966672|ref|ZP_02548949.1| hypothetical protein MtubH3_00808 [Mycobacterium tuberculosis 
H37Ra]
Length=217

 Score =  419 bits (1077),  Expect = 5e-115, Method: Compositional matrix adjust.
 Identities = 211/211 (100%), Positives = 211/211 (100%), Gaps = 0/211 (0%)

Query  199  ELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCLQMHLLNLSFAIAVRKRAK  258
            ELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCLQMHLLNLSFAIAVRKRAK
Sbjct  7    ELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCLQMHLLNLSFAIAVRKRAK  66

Query  259  ADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVLELHPLLNPAGYVLAETSP  318
            ADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVLELHPLLNPAGYVLAETSP
Sbjct  67   ADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVLELHPLLNPAGYVLAETSP  126

Query  319  DRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVRISGTDTDWTAELIEADAP  378
            DRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVRISGTDTDWTAELIEADAP
Sbjct  127  DRLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVRISGTDTDWTAELIEADAP  186

Query  379  ASELPEVLVAKVSRGSVFQFEPRRSLPLTVK  409
            ASELPEVLVAKVSRGSVFQFEPRRSLPLTVK
Sbjct  187  ASELPEVLVAKVSRGSVFQFEPRRSLPLTVK  217


>gi|54024554|ref|YP_118796.1| hypothetical protein nfa25850 [Nocardia farcinica IFM 10152]
 gi|54016062|dbj|BAD57432.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=417

 Score =  416 bits (1069),  Expect = 4e-114, Method: Compositional matrix adjust.
 Identities = 225/411 (55%), Positives = 271/411 (66%), Gaps = 8/411 (1%)

Query  4    SRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYTKR  63
            SR+  L+R  LA L+PELLL G LIDRSGMA+ I AFGR+ M Q+AIEEW  ASP+YT+R
Sbjct  8    SRFRPLARETLAALVPELLLCGHLIDRSGMAYSIAAFGREGMAQVAIEEWQTASPVYTRR  67

Query  64   MQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEPMGD  123
            MQ ALNF GD V TIFKGLQLDIGAPPQFMDFRF ++D  HGEF LDHCGAL DVEPMG+
Sbjct  68   MQAALNFRGDSVETIFKGLQLDIGAPPQFMDFRFRVYDHDHGEFWLDHCGALADVEPMGE  127

Query  124  DYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPEAEG  183
            ++VV MCH IEDPTFDATA+ATNP AQVRPIHRPPR PA R P CAWTV ID ++     
Sbjct  128  EFVVSMCHDIEDPTFDATALATNPHAQVRPIHRPPRNPAGRVPVCAWTVTIDAAHVPPPV  187

Query  184  IPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCLQMH  243
             P    +  + AA  +L  +D +++G  DYSGPL+SDL F  FSHSALVR+A+EVCLQ H
Sbjct  188  PPNAGLLAGSAAARLDLAPIDPTEEGQADYSGPLLSDLRFADFSHSALVRIAEEVCLQQH  247

Query  244  LLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVLELH  303
            LL + F IAVR R  A+    I+   +Q  G+AGL AER+ R + L         VL +H
Sbjct  248  LLTMGFLIAVRARTGAEEAAVIA--RKQFTGIAGLTAERLRRCLGLGTDAAALAAVLRVH  305

Query  304  PLLNPAGY--VLAETSPDRLVVH---NSPAHADGAWISLCTPASVQPLQAIATAVDPHLK  358
            P LNP  Y  +  E + +R+ +H    S A  DG W +L T   +QPL A+A AVDP   
Sbjct  306  PALNPLPYTGIEIEEAGERVRLHIPRASGAQTDGTWPALLTAGQLQPLDALARAVDPRYV  365

Query  359  VRISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRR-SLPLTV  408
                 T    + E   AD P  E  EV V + S G+ F+F  R   LPLTV
Sbjct  366  ATGQDTADGLSVEFTLADRPFREASEVAVTRFSTGAAFEFTDRGIPLPLTV  416


>gi|167967612|ref|ZP_02549889.1| hypothetical protein MtubH3_06086 [Mycobacterium tuberculosis 
H37Ra]
Length=198

 Score =  415 bits (1066),  Expect = 7e-114, Method: Compositional matrix adjust.
 Identities = 197/197 (100%), Positives = 197/197 (100%), Gaps = 0/197 (0%)

Query  1    MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY  60
            MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY
Sbjct  1    MSQSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIY  60

Query  61   TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEP  120
            TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEP
Sbjct  61   TKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEP  120

Query  121  MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE  180
            MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE
Sbjct  121  MGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPE  180

Query  181  AEGIPALDAVRETKAAT  197
            AEGIPALDAVRETKAAT
Sbjct  181  AEGIPALDAVRETKAAT  197


>gi|325676482|ref|ZP_08156160.1| hypothetical protein HMPREF0724_13943 [Rhodococcus equi ATCC 
33707]
 gi|325552660|gb|EGD22344.1| hypothetical protein HMPREF0724_13943 [Rhodococcus equi ATCC 
33707]
Length=420

 Score =  408 bits (1049),  Expect = 8e-112, Method: Compositional matrix adjust.
 Identities = 232/410 (57%), Positives = 279/410 (69%), Gaps = 9/410 (2%)

Query  6    YAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYTKRMQ  65
            +A LSR++LA L+PELLL GQLIDRSGMA  I  FGR+ M Q+AIEEW  ASP YT+RMQ
Sbjct  12   FAALSRTDLAALVPELLLCGQLIDRSGMAHLIVEFGREGMAQVAIEEWQAASPWYTRRMQ  71

Query  66   KALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEPMGDDY  125
            +AL++EGDDV TIFKGLQLDIGAPPQFMDFRF + D  HGEF LDHCGAL+DVEP+GD+Y
Sbjct  72   RALHYEGDDVVTIFKGLQLDIGAPPQFMDFRFRVDDPQHGEFWLDHCGALMDVEPLGDEY  131

Query  126  VVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPEAEGIP  185
            V  MCH IEDPTFDATA+ATN  AQVRPIHRPPR+PADRHPHCAWTV+IDE +      P
Sbjct  132  VTAMCHDIEDPTFDATALATNAHAQVRPIHRPPRRPADRHPHCAWTVVIDEKHVPPTMQP  191

Query  186  ALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCLQMHLL  245
              + +  T A T EL  +D   DG  DY+GPL++DL F  FS SALVR+A+EVCLQ HLL
Sbjct  192  HTEQIGRTAANTVELSPIDNGGDGNHDYAGPLLADLRFQDFSQSALVRIAEEVCLQQHLL  251

Query  246  NLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVLELHPL  305
             L F IAVRKRA  D    I+   +QL G+AG+ A+RI  A+ LP  +EG   VL LHPL
Sbjct  252  ALGFLIAVRKRADEDKTREIT--RKQLTGIAGVTAQRIRDALGLPDDLEGLATVLALHPL  309

Query  306  LNPAGYVLAETSPD----RLVVHNSP-AHADGAWISLCTPASVQPLQAIATAVDPHLKVR  360
            LNP  YV +E   D     LV+  +     DG W +L     ++ LQA+   V+P   VR
Sbjct  310  LNPTQYVDSEIRFDGQQLELVIRRTGLVDVDGGWPTLIDAEHLEALQALVRGVNPRFTVR  369

Query  361  ISGTDTDWTAELIEADA-PASELPEVLVAKVSRGSVFQFEPRR-SLPLTV  408
            + G         ++    PA E  EV++ KVS G+ F FE R   LPL V
Sbjct  370  VVGDGAAGLHVTVDVTTDPAPECVEVVITKVSTGAAFAFEDRGIPLPLYV  419


>gi|312138818|ref|YP_004006154.1| hypothetical protein REQ_13850 [Rhodococcus equi 103S]
 gi|311888157|emb|CBH47469.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length=420

 Score =  405 bits (1041),  Expect = 7e-111, Method: Compositional matrix adjust.
 Identities = 231/410 (57%), Positives = 276/410 (68%), Gaps = 9/410 (2%)

Query  6    YAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYTKRMQ  65
            +A LSR++LA L+PELLL GQLIDRSGMA  I  FGR+ M Q+AIEEW  ASP YT+RMQ
Sbjct  12   FAALSRTDLAALVPELLLCGQLIDRSGMAHLIVEFGREGMAQVAIEEWQAASPWYTRRMQ  71

Query  66   KALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEPMGDDY  125
            +AL +EGDDV TIFKGLQLDIGAPPQFMDFRF + D  HGEF LDHCGAL+DVEP+GD+Y
Sbjct  72   RALRYEGDDVVTIFKGLQLDIGAPPQFMDFRFRVDDPQHGEFWLDHCGALMDVEPLGDEY  131

Query  126  VVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPEAEGIP  185
            V  MCH IEDPTFDATA+ATN  AQVRPIHRPPR+PADRHPHCAWTV+IDE +      P
Sbjct  132  VTAMCHDIEDPTFDATALATNAHAQVRPIHRPPRRPADRHPHCAWTVVIDEKHVPPTMQP  191

Query  186  ALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCLQMHLL  245
              + +  T A T EL  +D   DG  DY+GPL++DL F  FS SALVR+A+EVCLQ HLL
Sbjct  192  HTEQIGRTAANTVELSPIDNCGDGNHDYAGPLLADLRFQDFSQSALVRIAEEVCLQQHLL  251

Query  246  NLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVLELHPL  305
             L F IAVRKR   D    I+   +QL G+AG+ A+RI  A+ LP  +EG   VL LHPL
Sbjct  252  ALGFLIAVRKRVDEDKTREIT--RKQLTGIAGVAAQRIRDALGLPDDLEGLATVLALHPL  309

Query  306  LNPAGYVLAETSPD----RLVVHNSP-AHADGAWISLCTPASVQPLQAIATAVDPHLKVR  360
            LNP  YV +E   D     LV+  +     DG W +L     ++ LQA+   V+P   VR
Sbjct  310  LNPTRYVDSEIRFDGEQLDLVIRRTGLVDVDGGWPTLIDAEHLEALQALVRGVNPRFTVR  369

Query  361  ISGTDTDWTAELIEADA-PASELPEVLVAKVSRGSVFQFEPRR-SLPLTV  408
            + G         ++    PA E  EV + KVS G+ F FE R   LPL V
Sbjct  370  VVGDGAAGLHVTVDVTTDPAPECVEVAITKVSTGAAFAFEDRGIPLPLYV  419


>gi|226306861|ref|YP_002766821.1| hypothetical protein RER_33740 [Rhodococcus erythropolis PR4]
 gi|226185978|dbj|BAH34082.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=419

 Score =  403 bits (1036),  Expect = 3e-110, Method: Compositional matrix adjust.
 Identities = 227/413 (55%), Positives = 277/413 (68%), Gaps = 9/413 (2%)

Query  3    QSRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYTK  62
            +  +  LS+ +LAVL+PELLL GQLIDRSGMA  I  FGR+ M Q+A+EEW  ASP YT+
Sbjct  8    RDSFETLSQRDLAVLVPELLLCGQLIDRSGMAHLIVEFGREGMAQVAVEEWESASPWYTR  67

Query  63   RMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEPMG  122
            RMQKAL +EGDDV TIFKGLQLDIGAPPQFMDFR+ + D  HGEF LDHCGAL+DVEP+G
Sbjct  68   RMQKALGYEGDDVVTIFKGLQLDIGAPPQFMDFRYRVDDPLHGEFWLDHCGALMDVEPLG  127

Query  123  DDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPEAE  182
            D++V  MCH IEDPTFDATAIATNP AQ+RPIHRPPR+PADRHPHCAWTV ID S+    
Sbjct  128  DEFVTSMCHDIEDPTFDATAIATNPHAQIRPIHRPPRRPADRHPHCAWTVSIDPSHTPPV  187

Query  183  GIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCLQM  242
                 + +  T A T EL  +D   DG  DYSGPL+SDL F  FS SALVR+A+E+C+Q 
Sbjct  188  MTAHTEQIGRTAAVTVELSPIDHGGDGRADYSGPLLSDLRFSDFSRSALVRIAEEICVQH  247

Query  243  HLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVLEL  302
            HLL L F  AVR+RA  D   A  +  +QL G+AG+ A+RI  A+ LP  +E    VL +
Sbjct  248  HLLALGFLAAVRRRADEDK--AREITRKQLTGIAGVAAQRIRDALGLPSTLESLALVLSV  305

Query  303  HPLLNPAGYVLAETSPD-----RLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHL  357
            HPLLNP  YV +E  PD       +  ++    DG W +L     + PLQA+   V+PH 
Sbjct  306  HPLLNPKQYVESEIRPDGGALELWISRDALVDRDGGWPTLLGSEHLDPLQALVRGVNPHF  365

Query  358  KVRISGTDTDWTAELIE-ADAPASELPEVLVAKVSRGSVFQFEPRR-SLPLTV  408
             VR+   D       ++  +APA E  EV + KVS G+ F FE R   LPL V
Sbjct  366  TVRVVAEDAAGLLLAVDITEAPAPECVEVAITKVSTGAAFVFEDRGIPLPLFV  418


>gi|229492729|ref|ZP_04386530.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|229320388|gb|EEN86208.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=415

 Score =  402 bits (1034),  Expect = 4e-110, Method: Compositional matrix adjust.
 Identities = 227/410 (56%), Positives = 275/410 (68%), Gaps = 9/410 (2%)

Query  6    YAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYTKRMQ  65
            +  LS+ +LAVL+PELLL GQLIDRSGMA  I  FGR+ M Q+A+EEW  ASP YT+RMQ
Sbjct  7    FEALSQRDLAVLVPELLLCGQLIDRSGMAHLIVEFGREGMAQVAVEEWESASPWYTRRMQ  66

Query  66   KALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEPMGDDY  125
            KAL +EGDDV TIFKGLQLDIGAPPQFMDFR+ + D  HGEF LDHCGAL+DVEP+GD++
Sbjct  67   KALGYEGDDVVTIFKGLQLDIGAPPQFMDFRYRVDDPLHGEFWLDHCGALMDVEPLGDEF  126

Query  126  VVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPEAEGIP  185
            V  MCH IEDPTFDATAIATNPRAQ+RPIHRPPR+PADRHPHCAWTV ID S+       
Sbjct  127  VTSMCHDIEDPTFDATAIATNPRAQIRPIHRPPRRPADRHPHCAWTVSIDPSHTPPVMTA  186

Query  186  ALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCLQMHLL  245
              + +  T A T EL  +D   DG  DYSGPL+SDL F  FS SALVR+A+E+C+Q HLL
Sbjct  187  HTEQIGRTAAVTVELSPIDHGGDGRADYSGPLLSDLRFSDFSRSALVRIAEEICVQHHLL  246

Query  246  NLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVLELHPL  305
             L F  AVR+RA  D   A  +  +QL G+AG+ A+RI  A+ LP  +E    VL +HPL
Sbjct  247  ALGFLAAVRRRADEDK--AREITRKQLTGIAGVAAQRIRDALGLPSTLESLALVLSVHPL  304

Query  306  LNPAGYVLAETSPD-----RLVVHNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKVR  360
            LNP  YV +E   D       +   +    DG W +L     + PLQA+   V+PH  VR
Sbjct  305  LNPKQYVESEIRQDGGALELRISREALVDRDGGWPTLLGSEHLDPLQALVRGVNPHFTVR  364

Query  361  ISGTDTDWTAELIE-ADAPASELPEVLVAKVSRGSVFQFEPRR-SLPLTV  408
            +   D       ++  +APA E  EV + KVS G+ F FE R   LPL V
Sbjct  365  VVAEDAAGLLLAVDITEAPAPECVEVAITKVSTGAAFVFEDRGIPLPLFV  414


>gi|226364183|ref|YP_002781965.1| hypothetical protein ROP_47730 [Rhodococcus opacus B4]
 gi|226242672|dbj|BAH53020.1| hypothetical protein [Rhodococcus opacus B4]
Length=417

 Score =  394 bits (1012),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 229/414 (56%), Positives = 281/414 (68%), Gaps = 14/414 (3%)

Query  4    SRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYTKR  63
            + +A LSR +LA+L+PELLL G LIDRSGM   I AFGR+ M Q+AIEEW  +SPIY +R
Sbjct  8    ASFANLSREDLAILVPELLLCGHLIDRSGMPHLIGAFGREGMTQVAIEEWMASSPIYARR  67

Query  64   MQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEPMGD  123
            MQ+AL FEGD V TIFKGLQLDIGAPPQFMDFR+ + D  HGEF LDHCGAL+DVEPMGD
Sbjct  68   MQRALGFEGDGVVTIFKGLQLDIGAPPQFMDFRYRVTDHDHGEFWLDHCGALMDVEPMGD  127

Query  124  DYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESY---PE  180
            +YV  MCH IEDPTFDATA+ATNP AQVRP+HRPPR+PADR PHC WTV ID+++   P 
Sbjct  128  EYVTAMCHDIEDPTFDATALATNPHAQVRPVHRPPRRPADRTPHCLWTVTIDDAHQPPPV  187

Query  181  AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCL  240
             EG   L  V +++AAT  L  +     G  DY+G L++DL F  FSHSAL R+A+EVC+
Sbjct  188  PEG---LVTVGKSRAATVGLSPIVTGGPGRHDYAGALLADLRFPDFSHSALTRIAEEVCM  244

Query  241  QMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL  300
            Q HLL L F +AV  RA+ DA  A+++  RQL G++GL +ERI  A+ LP  +EG   VL
Sbjct  245  QQHLLTLGFLLAV--RARTDAAGALAIARRQLTGISGLTSERIRNALGLPADLEGLAVVL  302

Query  301  ELHPLLNPAGYVLAETSPD-RLVV---HNSPAHADGAWISLCTPASVQPLQAIATAVDPH  356
             +HP LNP  YV    S D RL+V       A  DGAW S+     + PL A+   V P 
Sbjct  303  AVHPALNPRQYVDITISLDHRLLVTFGRECGASEDGAWPSMIDGEHLGPLTALVRGVSPR  362

Query  357  LKVR-ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRR-SLPLTV  408
              VR +  TDT  T E++  + PA E PEV + + S G+ F F  R   LPLTV
Sbjct  363  FAVRVVEETDTALTVEVVIGEPPAKEAPEVALTRFSTGADFAFTDRGVPLPLTV  416


>gi|111021646|ref|YP_704618.1| hypothetical protein RHA1_ro04674 [Rhodococcus jostii RHA1]
 gi|110821176|gb|ABG96460.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=414

 Score =  392 bits (1006),  Expect = 7e-107, Method: Compositional matrix adjust.
 Identities = 227/414 (55%), Positives = 280/414 (68%), Gaps = 14/414 (3%)

Query  4    SRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYTKR  63
            S +A LSR +LA+L+PELLL G LIDRSGM   I AFGR+ M Q+AIEEW  +SP+YT+R
Sbjct  5    SSFADLSREDLAILVPELLLCGHLIDRSGMPHLIGAFGREGMTQVAIEEWMASSPLYTRR  64

Query  64   MQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEPMGD  123
            MQ+AL FEGD V TIFKGLQLDIGAPPQFMDFR+ + D  HGEF LDHCGAL+DVEPMGD
Sbjct  65   MQRALGFEGDGVVTIFKGLQLDIGAPPQFMDFRYHVTDHDHGEFWLDHCGALMDVEPMGD  124

Query  124  DYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESY---PE  180
            +YV  MCH IEDPTFDATA+ATNP AQVRP+HRPPR+PADR PHC WTV ID++    P 
Sbjct  125  EYVTAMCHDIEDPTFDATALATNPHAQVRPVHRPPRRPADRTPHCLWTVTIDDTNVPPPI  184

Query  181  AEGIPALDAVRETKAATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCL  240
             EG   L  V +++AAT EL  +     G  DY+G L+ DL F  FSHSAL R+A+EVCL
Sbjct  185  PEG---LVTVGKSRAATVELSPIVTGGPGQHDYAGALLDDLRFPDFSHSALTRIAEEVCL  241

Query  241  QMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVL  300
            Q HLL L F +AV  RA+ DA+ A+ +  +QL G+AGL +ERI  A+ LP  +EG   VL
Sbjct  242  QQHLLTLGFLLAV--RARTDAEAALDIARKQLTGIAGLTSERIRNALGLPADLEGLAVVL  299

Query  301  ELHPLLNPAGYV-LAETSPDRLVV---HNSPAHADGAWISLCTPASVQPLQAIATAVDPH  356
             +HP  NP  YV +  T  DR ++    N  A  DGAW S+     + PL A+   V P 
Sbjct  300  AVHPAFNPRQYVDVTITLGDRTLLTLGRNCGAGEDGAWPSMIDAEHLGPLTALVRGVSPR  359

Query  357  LKVR-ISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRR-SLPLTV  408
              V+ +  T+   T E++  + PA E PEV + + S G+ F F  R   LPLTV
Sbjct  360  FAVQVVEETEAVLTVEIVIGEPPAKEAPEVALTRFSTGADFAFTDRGIPLPLTV  413


>gi|343927844|ref|ZP_08767312.1| hypothetical protein GOALK_097_02740 [Gordonia alkanivorans NBRC 
16433]
 gi|343762485|dbj|GAA14238.1| hypothetical protein GOALK_097_02740 [Gordonia alkanivorans NBRC 
16433]
Length=422

 Score =  378 bits (971),  Expect = 9e-103, Method: Compositional matrix adjust.
 Identities = 216/410 (53%), Positives = 276/410 (68%), Gaps = 9/410 (2%)

Query  6    YAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYTKRMQ  65
            Y GLS+++LAVL+PELLL GQ+IDRSGMA  I AFGR  M +IAIEEW  ASP+YT R++
Sbjct  8    YQGLSQAQLAVLVPELLLSGQMIDRSGMAHLISAFGRDVMGRIAIEEWMAASPVYTHRVR  67

Query  66   KALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEPMGDDY  125
             AL  +GD V  +FK LQLDIGAPPQFMDFR+ + D++HG F LDHCGALLDVEP+GD+Y
Sbjct  68   TALGVDGDGVEDMFKCLQLDIGAPPQFMDFRYRVDDKYHGSFILDHCGALLDVEPLGDEY  127

Query  126  VVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPEAEGIP  185
            V  MCH IEDPTFDATAIATN RA++RP+HRPPR+P DR PHC WTV I+    E    P
Sbjct  128  VTTMCHDIEDPTFDATAIATNRRARIRPVHRPPRRPVDRTPHCEWTVTIEPDRDELPLPP  187

Query  186  ALDAVRETKAATWELDNVD-ASDDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCLQMHL  244
              + +  T+A   EL  +D AS DG VDY GPLV DL F  +S SAL R+A+EV LQ  L
Sbjct  188  DAEEMFGTRAGQIELSAIDAASTDGWVDYRGPLVEDLQFAEWSTSALARIAEEVALQHQL  247

Query  245  LNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVLELHP  304
            L+L F I++R+ A+++ Q+ + +  +QLIG+AGL A+RI  A+ L    EG   VL LHP
Sbjct  248  LSLGFLISLRRYAESEDQV-VEIFRKQLIGIAGLAADRIRAALELSTDAEGLAQVLALHP  306

Query  305  LLNPAGYVLAETSPDRLVV-----HNSPAHADGAWISLCTPASVQPLQAIATAVDPHLKV  359
               PA Y     + D   V       S A  DG W+SL TP  ++PLQA ATAV P+L+V
Sbjct  307  CFGPAQYTGLTATADGDTVSVRLPRESDAMTDGGWMSLLTPDHLEPLQAAATAVSPYLRV  366

Query  360  RIS-GTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPR-RSLPLT  407
              +  T+      ++ +D    E  EV +A+ S G+ F+F  R RS+P+T
Sbjct  367  EGAVETEDALEIRIVTSDTAQKESGEVAIARFSGGASFEFVDRGRSIPIT  416


>gi|262203703|ref|YP_003274911.1| hypothetical protein Gbro_3840 [Gordonia bronchialis DSM 43247]
 gi|262087050|gb|ACY23018.1| hypothetical protein Gbro_3840 [Gordonia bronchialis DSM 43247]
Length=422

 Score =  378 bits (970),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 222/410 (55%), Positives = 276/410 (68%), Gaps = 9/410 (2%)

Query  6    YAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYTKRMQ  65
            YAGLS+ +LAVL+PELLL GQ+IDRSGMA  I AFGR+ M QIAIEEW  ASP+YT RM+
Sbjct  8    YAGLSQRQLAVLVPELLLSGQMIDRSGMAHLISAFGREVMGQIAIEEWMAASPVYTHRMR  67

Query  66   KALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEPMGDDY  125
             AL  +GD V  +FK LQLDIGAPPQFMDFR+ + DR+HG F L+HCGAL+DVEPMGDDY
Sbjct  68   TALGIDGDGVEDMFKCLQLDIGAPPQFMDFRYEITDRYHGAFVLNHCGALMDVEPMGDDY  127

Query  126  VVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPEAEGIP  185
            V  MCH IEDPTFDATAIATN RA++RPIHRPPR+PADRHPHCAWTV I+    E    P
Sbjct  128  VTTMCHDIEDPTFDATAIATNRRARIRPIHRPPRRPADRHPHCAWTVTIEPDREELPLPP  187

Query  186  ALDAVRETKAATWELDNVDAS-DDGLVDYSGPLVSDLDFGAFSHSALVRMADEVCLQMHL  244
                +  T+A   +L  +DAS  DG VDY GPL +DL F  +S SALVR+A+EV +Q HL
Sbjct  188  DSVEMFTTRAGDVQLSPIDASATDGHVDYRGPLFADLQFREWSRSALVRIAEEVAVQHHL  247

Query  245  LNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVLELHP  304
            L+L F  +VR+ A  D Q+   +  +QLIG+AGL A+R+ +A+ LP    G   V+ +HP
Sbjct  248  LSLGFLWSVRRHAGDDEQVR-DIFRKQLIGIAGLAADRLRQALDLPSDAAGLAAVIAVHP  306

Query  305  LLNPAGY--VLAETSPDRLVVH---NSPAHADGAWISLCTPASVQPLQAIATAVDPHLKV  359
             L P  Y  V AE   D + V    +S A ADG W+SL     ++PLQAI  AVD   ++
Sbjct  307  CLGPVQYTGVRAEVDGDAVAVTIPASSAATADGGWLSLIDAEHLEPLQAIGVAVDNRWEI  366

Query  360  RISGTDTD-WTAELIEADAPASELPEVLVAKVSRGSVFQFEPR-RSLPLT  407
              S T  D  T      +    E  EV +A+ S G+ F+F  R RS+P+T
Sbjct  367  ASSETTADGLTVRFRLGERSHKESGEVAIARFSSGATFEFTDRGRSIPIT  416


>gi|326384235|ref|ZP_08205917.1| hypothetical protein SCNU_14926 [Gordonia neofelifaecis NRRL 
B-59395]
 gi|326197100|gb|EGD54292.1| hypothetical protein SCNU_14926 [Gordonia neofelifaecis NRRL 
B-59395]
Length=418

 Score =  375 bits (962),  Expect = 9e-102, Method: Compositional matrix adjust.
 Identities = 218/415 (53%), Positives = 270/415 (66%), Gaps = 22/415 (5%)

Query  9    LSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYTKRMQKAL  68
            L+  +LA L+PE LL GQLIDRSGMA  I  FGR+ M Q+AIEEW  ASP+YT RM+ AL
Sbjct  10   LTHDQLATLVPESLLSGQLIDRSGMAHLIAEFGREGMTQVAIEEWMAASPVYTARMRTAL  69

Query  69   NFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEPMGDDYVVG  128
              +GD V  +FK LQLDIGAPPQFMDFR+ + DR+HG F LDHCGALLDVEPMG++YV  
Sbjct  70   GIDGDGVEDMFKCLQLDIGAPPQFMDFRYRIVDRYHGSFVLDHCGALLDVEPMGEEYVTA  129

Query  129  MCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYPEAEGIPALD  188
            MCH IEDPTFDATAIATN RA++RP+HRPPR PADR PHC WTV I+   P+ E +P L 
Sbjct  130  MCHDIEDPTFDATAIATNRRARIRPVHRPPRVPADRAPHCEWTVTIE---PDREELP-LP  185

Query  189  AVRE----TKAATWELDNVDASD-DGLVDYSGPLVSDLDFGAFSHSALVRMADEVCLQMH  243
            AV E    T+AA  EL  +D +D DGLVDY GPLV DL FG FS SALVR+A+E  LQ  
Sbjct  186  AVTEPTLATRAAAIELSAIDPADADGLVDYRGPLVEDLAFGEFSTSALVRIAEETALQHQ  245

Query  244  LLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALG-VLEL  302
            LL + F  +VR+R   D   A ++  +QLIG+AG+ AER+  ++        AL  VL +
Sbjct  246  LLAIGFLASVRRR--TDEGTADAILDKQLIGIAGITAERLAASVFGRRNDAQALADVLNV  303

Query  303  HPLLNPAGY--VLAETSPDRLVV---HNSPAHADGAWISLCTPASVQPLQAIATAVDPHL  357
            HP+  P  Y  V+AE   D + V    +SPA  DGAW+ L +   +  LQ+ A AVD   
Sbjct  304  HPVFGPTQYTGVVAEAVGDGVRVRIPQDSPAVEDGAWLRLLSQGRLDALQSAARAVDATW  363

Query  358  KVRISGTD-TDWTAELIEADAPASELPEVLVAKVSRGSVFQFE---PRRSLPLTV  408
             V  +  D TD    +   D P  E  EV + + S GS F F    P ++LPL+V
Sbjct  364  VVGEAVVDGTDLVVSIGRGD-PQLESGEVAIVRFSAGSSFAFADRGPSKALPLSV  417


>gi|319950409|ref|ZP_08024325.1| hypothetical protein ES5_12550 [Dietzia cinnamea P4]
 gi|319435925|gb|EFV91129.1| hypothetical protein ES5_12550 [Dietzia cinnamea P4]
Length=432

 Score =  317 bits (812),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 201/415 (49%), Positives = 254/415 (62%), Gaps = 21/415 (5%)

Query  9    LSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYTKRMQKAL  68
            LS S LA LLP+LLLIGQLIDR+GM   +  FG   M  +AIEEW  ASP Y KRM++AL
Sbjct  21   LSHSTLARLLPDLLLIGQLIDRAGMPALLGEFGVDGMRDVAIEEWQAASPHYAKRMKEAL  80

Query  69   NFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVEPMGDDYVVG  128
            +  GD V  IFKG QLD+GAPP+FMDFR+++ D  +GEF LDHCGAL+DVEPMGD  V  
Sbjct  81   SITGDGVAEIFKGFQLDVGAPPEFMDFRYSVSDHDNGEFWLDHCGALMDVEPMGDRLVTT  140

Query  129  MCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIID---ESYPEAEGIP  185
            MCH IEDPTF ATA+ATNP A V PIHRPPR P  R PHC W V ID   E +P  E  P
Sbjct  141  MCHDIEDPTFPATALATNPLAVVEPIHRPPRSPEGRTPHCHWRVRIDPDGEPFPFPE--P  198

Query  186  ALDAVRETKAATWELD---NVDASDDG-LVDYSGPLVSDLDFGAFSHSALVRMADEVCLQ  241
            A+++   ++   +  D     D + +G   DY+GPL+SDL F  F+ +AL+R+  EV LQ
Sbjct  199  AVESA-SSRVVGFRFDPPAPRDTTGEGDRDDYAGPLLSDLVFTEFTSAALIRIIREVYLQ  257

Query  242  MHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMALPGGIEGALGVLE  301
            MHLL + F  +VR+R  +DA++A  +   Q  G+AG+ A RI   + +     G   VL+
Sbjct  258  MHLLAVGFHQSVRRR--SDAEVADRLLAYQATGIAGVAAGRIRDVLGVAADAPGLAAVLD  315

Query  302  LHPLLNPAGYV--LAETSPD--RLVVHNSPA---HADGAWISLCTPASVQPLQAIATAVD  354
            +HPL  P  Y    +E S D   L V    A    AD  W+ L     ++PL A A AVD
Sbjct  316  VHPLAGPTAYTGYSSEVSADGAELTVRWDTAADGFADDTWLPLLARDGLRPLAAAAQAVD  375

Query  355  PHLKV-RISGTDTDWTAELIEADAPASELPEVLVAKVSRGSVFQFEPRRS-LPLT  407
            PH  V R+    +   A L   D PA E  EV V +VS G+ F F PRR+ LP+T
Sbjct  376  PHWTVERVPADGSRVGAVLRMGDRPAEESEEVAVTRVSTGAAFDFGPRRNALPIT  430


>gi|41408293|ref|NP_961129.1| hypothetical protein MAP2195 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41396649|gb|AAS04512.1| hypothetical protein MAP_2195 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=448

 Score =  265 bits (677),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 140/245 (58%), Positives = 176/245 (72%), Gaps = 6/245 (2%)

Query  47   QIAIEEWAGASPIYTKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGE  106
            Q+AIEEW GASP YT+R++ AL   GD V  IFK LQ D+GAPPQF+DFR++L D  HGE
Sbjct  101  QVAIEEWMGASPNYTRRLRHALGVTGDTVEDIFKVLQFDVGAPPQFLDFRYSLIDPNHGE  160

Query  107  FHLDHCGALLDVEPMGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHP  166
            F  D+CGAL+DVEPMGD +V  MCHTI+D TFDATAIATNP+A+ RPIHRPPRKPADR P
Sbjct  161  FRNDYCGALIDVEPMGDVWVRAMCHTIQDFTFDATAIATNPKARFRPIHRPPRKPADRTP  220

Query  167  HCAWTVIIDESYPEAEGIPALDAVRETKA--ATWELDNVDASDDGLVDYSGPLVSDLDFG  224
            HC W+V I++S  E   IPA +AV  ++      + D +D SDDGL DY+GPL SD+ F 
Sbjct  221  HCHWSVTIEDSR-EDLPIPA-EAVEVSRCELTALQFDPIDLSDDGLGDYTGPLFSDIRFD  278

Query  225  AFSHSALVRMADEVCLQMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIH  284
             +S SALVR+A+EV +Q HLL L+F  +VR R   +A+ A+ +  RQ  G A +G+ RI 
Sbjct  279  QWSRSALVRLAEEVAIQHHLLALAFERSVR-RHGGEAK-ALGLLRRQFTGTAYVGSARIK  336

Query  285  RAMAL  289
             A  L
Sbjct  337  AASGL  341


>gi|336458111|gb|EGO37094.1| hypothetical protein MAPs_15690 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=341

 Score =  252 bits (643),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 134/237 (57%), Positives = 169/237 (72%), Gaps = 6/237 (2%)

Query  55   GASPIYTKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGA  114
            GASP YT+R++ AL   GD V  IFK LQ D+GAPPQF+DFR++L D  HGEF  D+CGA
Sbjct  2    GASPNYTRRLRHALGVTGDTVEDIFKVLQFDVGAPPQFLDFRYSLIDPNHGEFRNDYCGA  61

Query  115  LLDVEPMGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVII  174
            L+DVEPMGD +V  MCHTI+D TFDATAIATNP+A+ RPIHRPPRKPADR PHC W+V I
Sbjct  62   LIDVEPMGDVWVRAMCHTIQDFTFDATAIATNPKARFRPIHRPPRKPADRTPHCHWSVTI  121

Query  175  DESYPEAEGIPALDAVRETKA--ATWELDNVDASDDGLVDYSGPLVSDLDFGAFSHSALV  232
            ++S  E   IPA +AV  ++      + D +D SDDGL DY+GPL SD+ F  +S SALV
Sbjct  122  EDSR-EDLPIPA-EAVEVSRCELTALQFDPIDLSDDGLGDYTGPLFSDIRFDQWSRSALV  179

Query  233  RMADEVCLQMHLLNLSFAIAVRKRAKADAQLAISVNTRQLIGVAGLGAERIHRAMAL  289
            R+A+EV +Q HLL L+F  +VR R   +A+ A+ +  RQ  G A +G+ RI  A  L
Sbjct  180  RLAEEVAIQHHLLALAFERSVR-RHGGEAK-ALGLLRRQFTGTAYVGSARIKAASGL  234


>gi|294495818|ref|YP_003542311.1| ATP-NAD/AcoX kinase [Methanohalophilus mahii DSM 5219]
 gi|292666817|gb|ADE36666.1| ATP-NAD/AcoX kinase [Methanohalophilus mahii DSM 5219]
Length=278

 Score = 40.8 bits (94),  Expect = 0.40, Method: Compositional matrix adjust.
 Identities = 35/130 (27%), Positives = 53/130 (41%), Gaps = 10/130 (7%)

Query  60   YTKRMQKALNFEGDDVPTIFKGLQLDIGAPPQFMDFRFTLHDRWHGEFHLDHCGALLDVE  119
            YT+R + A+N  G ++P     + L    P + + FR T+ +    EF  D  G ++   
Sbjct  119  YTERCRIAVNLNGKELPCATNEVVLTTARPAKILTFRVTVDECMIEEFRSD--GVVIATP  176

Query  120  PMGDDYVVGMCHTIEDPTFDATAIATNPRAQVRPIHRPPRKPADRHPHCAWTVIIDESYP  179
                 Y +     I DP  +AT I   P A  +   RP   P+DR      T+      P
Sbjct  177  TGSTAYAMSAGGPILDPRVNATLIV--PLAPFKLSARPWVVPSDRPIKVEITI------P  228

Query  180  EAEGIPALDA  189
            E E    +D 
Sbjct  229  EKEAAVVIDG  238


>gi|302335610|ref|YP_003800817.1| phosphoenolpyruvate carboxykinase (ATP) [Olsenella uli DSM 7084]
 gi|301319450|gb|ADK67937.1| phosphoenolpyruvate carboxykinase (ATP) [Olsenella uli DSM 7084]
Length=530

 Score = 37.7 bits (86),  Expect = 3.6, Method: Compositional matrix adjust.
 Identities = 31/128 (25%), Positives = 54/128 (43%), Gaps = 14/128 (10%)

Query  283  IHRAMALPGGIEGALGVLELHPLLNPAGYVLAETSPDRLVVHNSPAHADGAWISLCTPAS  342
            I +A+A   GI  + G L +       G     +  DR +V     H D AW S+  P S
Sbjct  28   IEKALANHEGILTSTGALAVE-----TGKYTGRSPHDRFIVDTPDVHDDIAWGSVNMPFS  82

Query  343  VQPLQAIATAVDPHLKVR-------ISGTDTDWTAELIEADAPASE--LPEVLVAKVSRG  393
            ++  + +  A+  +LK         I+G D  W  + +     AS+      L+ + S+ 
Sbjct  83   IEGYEKVRKAITDYLKAHDLYIVHAIAGADRRWCRKFLVVCERASQALFARQLLVRPSKR  142

Query  394  SVFQFEPR  401
             +  F+P+
Sbjct  143  QLADFDPQ  150


>gi|124002679|ref|ZP_01687531.1| hypothetical protein M23134_04127 [Microscilla marina ATCC 23134]
 gi|123991907|gb|EAY31294.1| hypothetical protein M23134_04127 [Microscilla marina ATCC 23134]
Length=254

 Score = 37.0 bits (84),  Expect = 5.8, Method: Compositional matrix adjust.
 Identities = 32/108 (30%), Positives = 48/108 (45%), Gaps = 12/108 (11%)

Query  18   LPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAIEEWAGASPIYTKRMQKALNFEGDDV--  75
            LP+   +   ++  G  W I      E  +  + E   A+   T +M++    + DD+  
Sbjct  28   LPQSFEVATTLNMGGSDWSI------EDAEPKMSEEFIATGELTLKMRQLKKVKTDDILF  81

Query  76   --PTIFKGLQLDIGAPPQFMDFRFTLH-DRWHG-EFHLDHCGALLDVE  119
              PTI   +  DI    QF DF FT+H D WH  EF       L+D+E
Sbjct  82   SLPTISGHIPTDISKTAQFNDFIFTMHEDNWHQYEFLNKSSFPLIDLE  129


>gi|311742863|ref|ZP_07716671.1| ABC superfamily ATP binding cassette transporter, ABC protein 
[Aeromicrobium marinum DSM 15272]
 gi|311313543|gb|EFQ83452.1| ABC superfamily ATP binding cassette transporter, ABC protein 
[Aeromicrobium marinum DSM 15272]
Length=292

 Score = 36.2 bits (82),  Expect = 9.6, Method: Compositional matrix adjust.
 Identities = 27/95 (29%), Positives = 42/95 (45%), Gaps = 12/95 (12%)

Query  4    SRYAGLSRSELAVLLPELLLIGQLIDRSGMAWCIQAFGRQEMLQIAI------------E  51
            +R  GLSR++ +    ELL    L+DR+       + G Q+ +QIA             E
Sbjct  96   ARLHGLSRAQASARTEELLSHFSLVDRADDILDALSLGNQQRVQIAAALVHEPRALVLDE  155

Query  52   EWAGASPIYTKRMQKALNFEGDDVPTIFKGLQLDI  86
             ++G  P+    M   L  E   +P +F   QLD+
Sbjct  156  PFSGLDPVAVDSMVDLLTREAAGLPLLFSSHQLDL  190



Lambda     K      H
   0.321    0.136    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 816290083944




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40