BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0314c Length=220 Score E Sequences producing significant alignments: (Bits) Value gi|15607455|ref|NP_214828.1| hypothetical protein Rv0314c [Mycob... 437 4e-121 gi|340625345|ref|YP_004743797.1| hypothetical protein MCAN_03161... 437 6e-121 gi|308377389|ref|ZP_07668501.1| conserved membrane protein [Myco... 437 6e-121 gi|31791493|ref|NP_853986.1| hypothetical protein Mb0322c [Mycob... 436 1e-120 gi|306782942|ref|ZP_07421264.1| conserved membrane protein [Myco... 436 2e-120 gi|289748797|ref|ZP_06508175.1| conserved membrane protein [Myco... 434 4e-120 gi|308395108|ref|ZP_07491908.2| conserved membrane protein [Myco... 431 4e-119 gi|308369363|ref|ZP_07417492.2| conserved membrane protein [Myco... 429 2e-118 gi|289748798|ref|ZP_06508176.1| conserved hypothetical protein [... 416 2e-114 gi|15839701|ref|NP_334738.1| hypothetical protein MT0328.2 [Myco... 273 1e-71 gi|342859208|ref|ZP_08715862.1| hypothetical protein MCOL_10028 ... 227 1e-57 gi|118619805|ref|YP_908137.1| hypothetical protein MUL_4742 [Myc... 219 2e-55 gi|240173240|ref|ZP_04751898.1| hypothetical protein MkanA1_2826... 212 3e-53 gi|183980593|ref|YP_001848884.1| hypothetical protein MMAR_0565 ... 211 7e-53 gi|254821945|ref|ZP_05226946.1| hypothetical protein MintA_18577... 205 4e-51 gi|254777283|ref|ZP_05218799.1| hypothetical protein MaviaA2_218... 199 2e-49 gi|41409900|ref|NP_962736.1| hypothetical protein MAP3802c [Myco... 198 5e-49 gi|118466590|ref|YP_883970.1| hypothetical protein MAV_4846 [Myc... 196 2e-48 gi|296167686|ref|ZP_06849932.1| conserved hypothetical protein [... 182 3e-44 gi|108797854|ref|YP_638051.1| hypothetical protein Mmcs_0879 [My... 138 5e-31 gi|145225704|ref|YP_001136382.1| hypothetical protein Mflv_5128 ... 135 6e-30 gi|169628269|ref|YP_001701918.1| hypothetical protein MAB_1176c ... 131 9e-29 gi|315446055|ref|YP_004078934.1| hypothetical protein Mspyr1_454... 129 3e-28 gi|15839699|ref|NP_334736.1| hypothetical protein MT0328 [Mycoba... 124 1e-26 gi|118469764|ref|YP_889562.1| hypothetical protein MSMEG_5317 [M... 120 1e-25 gi|120402227|ref|YP_952056.1| hypothetical protein Mvan_1215 [My... 115 5e-24 gi|333990177|ref|YP_004522791.1| hypothetical protein JDM601_153... 106 2e-21 gi|296167814|ref|ZP_06850000.1| conserved hypothetical protein [... 94.7 7e-18 gi|41409950|ref|NP_962786.1| hypothetical protein MAP3852c [Myco... 91.7 7e-17 gi|336460295|gb|EGO39196.1| Protein of unknown function (DUF3060... 91.7 8e-17 gi|342859151|ref|ZP_08715805.1| hypothetical protein MCOL_09743 ... 91.3 8e-17 gi|254777231|ref|ZP_05218747.1| hypothetical protein MaviaA2_215... 89.0 4e-16 gi|118464376|ref|YP_883921.1| hypothetical protein MAV_4794 [Myc... 89.0 5e-16 gi|296168530|ref|ZP_06850335.1| conserved hypothetical protein [... 65.9 4e-09 gi|41410235|ref|NP_963071.1| hypothetical protein MAP4137c [Myco... 61.2 1e-07 gi|336460543|gb|EGO39436.1| Protein of unknown function (DUF3060... 61.2 1e-07 gi|118465299|ref|YP_883630.1| hypothetical protein MAV_4496 [Myc... 60.5 2e-07 gi|183981029|ref|YP_001849320.1| hypothetical protein MMAR_1008 ... 59.7 3e-07 gi|115373650|ref|ZP_01460945.1| conserved hypothetical protein [... 59.3 4e-07 gi|254822765|ref|ZP_05227766.1| hypothetical protein MintA_22739... 58.9 5e-07 gi|342858836|ref|ZP_08715490.1| hypothetical protein MCOL_08168 ... 58.9 6e-07 gi|240167676|ref|ZP_04746335.1| hypothetical protein MkanA1_0007... 58.5 6e-07 gi|118616544|ref|YP_904876.1| hypothetical protein MUL_0760 [Myc... 57.4 2e-06 gi|118472451|ref|YP_885779.1| hypothetical protein MSMEG_1393 [M... 55.8 4e-06 gi|315446010|ref|YP_004078889.1| hypothetical protein Mspyr1_450... 55.8 5e-06 gi|120402285|ref|YP_952114.1| hypothetical protein Mvan_1274 [My... 55.5 6e-06 gi|289568620|ref|ZP_06448847.1| conserved threonine rich protein... 55.1 7e-06 gi|183981030|ref|YP_001849321.1| hypothetical protein MMAR_1009 ... 54.7 1e-05 gi|118616545|ref|YP_904877.1| hypothetical protein MUL_0761 [Myc... 54.3 1e-05 gi|169630932|ref|YP_001704581.1| hypothetical protein MAB_3853 [... 53.5 2e-05 >gi|15607455|ref|NP_214828.1| hypothetical protein Rv0314c [Mycobacterium tuberculosis H37Rv] gi|148660080|ref|YP_001281603.1| hypothetical protein MRA_0323 [Mycobacterium tuberculosis H37Ra] gi|148821510|ref|YP_001286264.1| hypothetical protein TBFG_10319 [Mycobacterium tuberculosis F11] 49 more sequence titles Length=220 Score = 437 bits (1125), Expect = 4e-121, Method: Compositional matrix adjust. Identities = 220/220 (100%), Positives = 220/220 (100%), Gaps = 0/220 (0%) Query 1 MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGP 60 MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGP Sbjct 1 MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGP 60 Query 61 FGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVP 120 FGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVP Sbjct 61 FGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVP 120 Query 121 TPTAQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRN 180 TPTAQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRN Sbjct 121 TPTAQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRN 180 Query 181 SVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 SVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG Sbjct 181 SVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 >gi|340625345|ref|YP_004743797.1| hypothetical protein MCAN_03161 [Mycobacterium canettii CIPT 140010059] gi|340003535|emb|CCC42656.1| putative conserved membrane protein [Mycobacterium canettii CIPT 140010059] Length=220 Score = 437 bits (1124), Expect = 6e-121, Method: Compositional matrix adjust. Identities = 219/220 (99%), Positives = 220/220 (100%), Gaps = 0/220 (0%) Query 1 MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGP 60 MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGP Sbjct 1 MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGP 60 Query 61 FGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVP 120 FGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRA+P Sbjct 61 FGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAIP 120 Query 121 TPTAQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRN 180 TPTAQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRN Sbjct 121 TPTAQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRN 180 Query 181 SVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 SVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG Sbjct 181 SVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 >gi|308377389|ref|ZP_07668501.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009] gi|308355951|gb|EFP44802.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009] Length=283 Score = 437 bits (1124), Expect = 6e-121, Method: Compositional matrix adjust. Identities = 219/220 (99%), Positives = 219/220 (99%), Gaps = 0/220 (0%) Query 1 MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGP 60 MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGP Sbjct 64 MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGP 123 Query 61 FGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVP 120 FGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVP Sbjct 124 FGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVP 183 Query 121 TPTAQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRN 180 TPTAQPATTLPPAGASLSVSGVNVNRTIACNDS VSVSGMSNTVVITGHCTSLTVSGMRN Sbjct 184 TPTAQPATTLPPAGASLSVSGVNVNRTIACNDSTVSVSGMSNTVVITGHCTSLTVSGMRN 243 Query 181 SVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 SVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG Sbjct 244 SVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 283 >gi|31791493|ref|NP_853986.1| hypothetical protein Mb0322c [Mycobacterium bovis AF2122/97] gi|121636229|ref|YP_976452.1| hypothetical protein BCG_0354c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988702|ref|YP_002643389.1| hypothetical protein JTY_0324 [Mycobacterium bovis BCG str. Tokyo 172] gi|31617079|emb|CAD93186.1| POSSIBLE CONSERVED MEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] gi|121491876|emb|CAL70339.1| Possible conserved membrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224771815|dbj|BAH24621.1| hypothetical protein JTY_0324 [Mycobacterium bovis BCG str. Tokyo 172] gi|341600245|emb|CCC62915.1| possible conserved membrane protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=220 Score = 436 bits (1122), Expect = 1e-120, Method: Compositional matrix adjust. Identities = 219/220 (99%), Positives = 219/220 (99%), Gaps = 0/220 (0%) Query 1 MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGP 60 MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGP Sbjct 1 MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGP 60 Query 61 FGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVP 120 FGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVP Sbjct 61 FGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVP 120 Query 121 TPTAQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRN 180 TPTAQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRN Sbjct 121 TPTAQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRN 180 Query 181 SVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 SVT DSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG Sbjct 181 SVTADSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 >gi|306782942|ref|ZP_07421264.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|306787310|ref|ZP_07425632.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] gi|306791863|ref|ZP_07430165.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005] 7 more sequence titles Length=220 Score = 436 bits (1120), Expect = 2e-120, Method: Compositional matrix adjust. Identities = 219/220 (99%), Positives = 219/220 (99%), Gaps = 0/220 (0%) Query 1 MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGP 60 MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGP Sbjct 1 MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGP 60 Query 61 FGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVP 120 FGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVP Sbjct 61 FGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVP 120 Query 121 TPTAQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRN 180 TPTAQPATTLPPAGASLSVSGVNVNRTIACNDS VSVSGMSNTVVITGHCTSLTVSGMRN Sbjct 121 TPTAQPATTLPPAGASLSVSGVNVNRTIACNDSTVSVSGMSNTVVITGHCTSLTVSGMRN 180 Query 181 SVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 SVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG Sbjct 181 SVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 >gi|289748797|ref|ZP_06508175.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289689384|gb|EFD56813.1| conserved membrane protein [Mycobacterium tuberculosis T92] Length=220 Score = 434 bits (1117), Expect = 4e-120, Method: Compositional matrix adjust. Identities = 219/220 (99%), Positives = 219/220 (99%), Gaps = 0/220 (0%) Query 1 MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGP 60 MIVVWEHLCMNPEDDP ARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGP Sbjct 1 MIVVWEHLCMNPEDDPGARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGP 60 Query 61 FGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVP 120 FGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVP Sbjct 61 FGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVP 120 Query 121 TPTAQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRN 180 TPTAQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRN Sbjct 121 TPTAQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRN 180 Query 181 SVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 SVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG Sbjct 181 SVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 >gi|308395108|ref|ZP_07491908.2| conserved membrane protein [Mycobacterium tuberculosis SUMu012] gi|308367498|gb|EFP56349.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012] Length=217 Score = 431 bits (1108), Expect = 4e-119, Method: Compositional matrix adjust. Identities = 216/217 (99%), Positives = 217/217 (100%), Gaps = 0/217 (0%) Query 4 VWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGPFGG 63 +WEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGPFGG Sbjct 1 MWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGPFGG 60 Query 64 PSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVPTPT 123 PSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVPTPT Sbjct 61 PSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVPTPT 120 Query 124 AQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRNSVT 183 AQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRNSVT Sbjct 121 AQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRNSVT 180 Query 184 VDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 VDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG Sbjct 181 VDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 217 >gi|308369363|ref|ZP_07417492.2| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|308375123|ref|ZP_07442788.2| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|308327865|gb|EFP16716.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|308347376|gb|EFP36227.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007] Length=217 Score = 429 bits (1102), Expect = 2e-118, Method: Compositional matrix adjust. Identities = 215/217 (99%), Positives = 216/217 (99%), Gaps = 0/217 (0%) Query 4 VWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGPFGG 63 +WEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGPFGG Sbjct 1 MWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGPFGG 60 Query 64 PSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVPTPT 123 PSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVPTPT Sbjct 61 PSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVPTPT 120 Query 124 AQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRNSVT 183 AQPATTLPPAGASLSVSGVNVNRTIACNDS VSVSGMSNTVVITGHCTSLTVSGMRNSVT Sbjct 121 AQPATTLPPAGASLSVSGVNVNRTIACNDSTVSVSGMSNTVVITGHCTSLTVSGMRNSVT 180 Query 184 VDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 VDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG Sbjct 181 VDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 217 >gi|289748798|ref|ZP_06508176.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289689385|gb|EFD56814.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=211 Score = 416 bits (1068), Expect = 2e-114, Method: Compositional matrix adjust. Identities = 211/211 (100%), Positives = 211/211 (100%), Gaps = 0/211 (0%) Query 10 MNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGPFGGPSPRSS 69 MNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGPFGGPSPRSS Sbjct 1 MNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGPFGGPSPRSS 60 Query 70 SGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVPTPTAQPATT 129 SGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVPTPTAQPATT Sbjct 61 SGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVPTPTAQPATT 120 Query 130 LPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRNSVTVDSVDT 189 LPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRNSVTVDSVDT Sbjct 121 LPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRNSVTVDSVDT 180 Query 190 IEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 IEAAGFNNEVTYHSGSPKISNAGGSNSVQQG Sbjct 181 IEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 211 >gi|15839701|ref|NP_334738.1| hypothetical protein MT0328.2 [Mycobacterium tuberculosis CDC1551] gi|13879825|gb|AAK44552.1| hypothetical protein MT0328.2 [Mycobacterium tuberculosis CDC1551] Length=136 Score = 273 bits (698), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 136/136 (100%), Positives = 136/136 (100%), Gaps = 0/136 (0%) Query 1 MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGP 60 MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGP Sbjct 1 MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGP 60 Query 61 FGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVP 120 FGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVP Sbjct 61 FGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVP 120 Query 121 TPTAQPATTLPPAGAS 136 TPTAQPATTLPPAGAS Sbjct 121 TPTAQPATTLPPAGAS 136 >gi|342859208|ref|ZP_08715862.1| hypothetical protein MCOL_10028 [Mycobacterium colombiense CECT 3035] gi|342133449|gb|EGT86652.1| hypothetical protein MCOL_10028 [Mycobacterium colombiense CECT 3035] Length=227 Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 132/230 (58%), Positives = 162/230 (71%), Gaps = 22/230 (9%) Query 10 MNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGP--FGGPSPR 67 M +DPE RIRELERPLA+ ARASE G SQ G YPPGP P P +GGP + Sbjct 1 MAANEDPEDRIRELERPLAETARASEQGSSQPAGQNYPPGPAGPQPPPSAPWTYGGPPQQ 60 Query 68 SSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPT--------PSVS--- 116 SGNRAWWIL +VV+G+L L GGIAAF+A +LS ++ SP PS+S Sbjct 61 RPSGNRAWWILGTIVVIGILALAGGIAAFAAHQLSGVKSIIASPPTISKTSSPPSISTNP 120 Query 117 ------RAVPTPTAQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHC 170 R P+P+ PA P G LSV+G+N NRTI CND+IVSVSG+SNTV ITGHC Sbjct 121 GLTTPRRRSPSPSTSPAA---PPGTELSVAGINENRTITCNDNIVSVSGVSNTVTITGHC 177 Query 171 TSLTVSGMRNSVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 TSL+VSG++NS+TV++VD+IEA+GF+N+VTYHSG+PKISN+GGSN VQQG Sbjct 178 TSLSVSGVQNSITVEAVDSIEASGFDNKVTYHSGAPKISNSGGSNVVQQG 227 >gi|118619805|ref|YP_908137.1| hypothetical protein MUL_4742 [Mycobacterium ulcerans Agy99] gi|118571915|gb|ABL06666.1| conserved membrane protein [Mycobacterium ulcerans Agy99] Length=242 Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 130/243 (54%), Positives = 164/243 (68%), Gaps = 27/243 (11%) Query 4 VWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYT-YPPGPPPPPYSYGG--- 59 +WEHLCMNPEDDPEARIR+LE+PLAD ARASELG SQ G + Y P Y Sbjct 1 MWEHLCMNPEDDPEARIRQLEQPLADAARASELGSSQPAGESAYQNYQGYPGYQPPPGSV 60 Query 60 -----------PFGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVV 108 F G +PRSSSGNRA+WI+AAV VVG+L V +A F+ R+S+ F Sbjct 61 PPSPPPYGYQPAFPGATPRSSSGNRAFWIIAAVFVVGILGAVAAVALFAVNRVSE-PFTT 119 Query 109 LSPTPSVSRAVP----------TPTAQPATTL-PPAGASLSVSGVNVNRTIACNDSIVSV 157 LSP +V P TPTA P+T+ PPAG+++SV GVN ++TI CND+IV+V Sbjct 120 LSPGTTVISTPPGPMSPGNKTQTPTAGPSTSAGPPAGSTISVVGVNQSQTITCNDNIVNV 179 Query 158 SGMSNTVVITGHCTSLTVSGMRNSVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSV 217 SGMSNTV ITGHC S++VSG++N+VTV++ D I A+G NN+VTY SGSPKIS +G N + Sbjct 180 SGMSNTVTITGHCASVSVSGLQNTVTVETADRITASGLNNKVTYQSGSPKISKSGSGNVI 239 Query 218 QQG 220 +QG Sbjct 240 EQG 242 >gi|240173240|ref|ZP_04751898.1| hypothetical protein MkanA1_28266 [Mycobacterium kansasii ATCC 12478] Length=244 Score = 212 bits (539), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 137/253 (55%), Positives = 163/253 (65%), Gaps = 51/253 (20%) Query 10 MNPEDDPEARIRELERPLADVARASELG-----------------------------GSQ 40 MNPEDDPEARIR+LE+PLAD ARASELG GS Sbjct 1 MNPEDDPEARIRQLEQPLADAARASELGSPQPPGGSAYQGYPPPGPVPPPPPMPPPYGST 60 Query 41 SGGYTYPPGPPPPPYSYGGPFGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQR 100 G Y Y Y PF G +PRSSSGNR +WILAAV VV +L +VGGI AF+ Sbjct 61 YGSYDS--------YGYQSPFPGATPRSSSGNRLFWILAAVFVVVILGVVGGIVAFAGSH 112 Query 101 LSQGNFVVLSPT-PSVSR---AVP--------TPTAQPATT-LPPAGASLSVSGVNVNRT 147 +S+ L+PT P++S VP TPTA PAT+ PP G +LSVSG+N N+T Sbjct 113 ISR-TLSTLTPTFPTISNPSGTVPPPSGSKTQTPTAGPATSPAPPPGGNLSVSGLNENKT 171 Query 148 IACNDSIVSVSGMSNTVVITGHCTSLTVSGMRNSVTVDSVDTIEAAGFNNEVTYHSGSPK 207 + CNDS+V +SGMSNTVVITGHC SLTVSG+ N+VTVD+VDTIEA+G NN+VTYHSGSPK Sbjct 172 LDCNDSVVEISGMSNTVVITGHCASLTVSGIENTVTVDAVDTIEASGINNKVTYHSGSPK 231 Query 208 ISNAGGSNSVQQG 220 +S +G N VQQG Sbjct 232 VSKSGSGNVVQQG 244 >gi|183980593|ref|YP_001848884.1| hypothetical protein MMAR_0565 [Mycobacterium marinum M] gi|183173919|gb|ACC39029.1| conserved membrane protein [Mycobacterium marinum M] Length=239 Score = 211 bits (536), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 126/240 (53%), Positives = 159/240 (67%), Gaps = 30/240 (12%) Query 10 MNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPP------------------ 51 MNPEDDPEARIR+LE+PLAD ARASELG SQ G + Sbjct 1 MNPEDDPEARIRQLEQPLADAARASELGSSQPAGESAYQNYQGYQGYQGYPGYQPPPGSV 60 Query 52 PPPYSYGGPFGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSP 111 PP Y Y F G +PRSSSGNRA+WI+AAV VVG+L V +A F+ R+S+ F LSP Sbjct 61 PPSYGYQPAFPGATPRSSSGNRAFWIIAAVFVVGILGAVAAVALFAVNRVSE-PFTTLSP 119 Query 112 TPSVSRAVP----------TPTAQPATTL-PPAGASLSVSGVNVNRTIACNDSIVSVSGM 160 +V P TPTA P+T+ PPAG+++SV GVN ++TI CND+IV+VSGM Sbjct 120 GTTVISTPPGPMSPGNKTQTPTAGPSTSAGPPAGSTISVVGVNQSQTITCNDNIVNVSGM 179 Query 161 SNTVVITGHCTSLTVSGMRNSVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 SNTV ITGHC S++VSG++N+VTV++ D I A+G NN+VTY SGSPKIS +G N ++QG Sbjct 180 SNTVTITGHCASVSVSGLQNTVTVETADRITASGLNNKVTYQSGSPKISKSGSGNVIEQG 239 >gi|254821945|ref|ZP_05226946.1| hypothetical protein MintA_18577 [Mycobacterium intracellulare ATCC 13950] Length=219 Score = 205 bits (521), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 130/221 (59%), Positives = 161/221 (73%), Gaps = 12/221 (5%) Query 10 MNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPP-----YSYGGPFGGP 64 M DDPE RIRELERPLA+ A ASE G S S G +PP P P ++YGGP GP Sbjct 1 MAANDDPEERIRELERPLAESAWASEQGSSASAGQAHPPPTPGAPPPPPAWTYGGPVTGP 60 Query 65 SPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVPTPTA 124 P S SGNR WWIL V+V+GV+ L GGIAAF+A ++S + SP PSVS + P P+A Sbjct 61 PPPSPSGNRVWWILGTVIVIGVIALAGGIAAFAAHQISGVKSFITSP-PSVSTS-PAPSA 118 Query 125 Q----PATT-LPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMR 179 P+T+ PP GA LSV+G+N +RTIACND+IVSVSG+SNTV ITGHC SL+VSG++ Sbjct 119 SRRAAPSTSPAPPRGARLSVAGINESRTIACNDNIVSVSGVSNTVTITGHCASLSVSGVQ 178 Query 180 NSVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 N+VT+++ D I A+GFNN+VTYHSG+PKISN+G SN V QG Sbjct 179 NAVTIEAADAITASGFNNKVTYHSGTPKISNSGDSNVVTQG 219 >gi|254777283|ref|ZP_05218799.1| hypothetical protein MaviaA2_21801 [Mycobacterium avium subsp. avium ATCC 25291] Length=220 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 126/223 (57%), Positives = 159/223 (72%), Gaps = 15/223 (6%) Query 10 MNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGPFGGPSPRSS 69 M DDPE RIRELERPLAD ARASE G + S G YPP P P +SYGGP GP + Sbjct 1 MAANDDPEERIRELERPLADSARASEQGSAPSTGPGYPPAPAP--WSYGGPVPGPPGQRP 58 Query 70 SGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRA---------VP 120 SGNR WW++ ++ VGVL L GGIAAF+A +LS ++ SP P++SR P Sbjct 59 SGNRVWWVVGTLIAVGVLALAGGIAAFAAHQLSGVKSIINSP-PTISRTFGPPPGISTTP 117 Query 121 TPTAQPATTLPPA---GASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSG 177 P+ T PA G LSV+G+N NRT+AC+D+ VSVSG+SNTVVITGHCTSL+VSG Sbjct 118 APSTSRRTPTSPAAPPGTELSVAGINENRTLACDDNPVSVSGVSNTVVITGHCTSLSVSG 177 Query 178 MRNSVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 ++N+VTV++V+ I+A+GFNN+VTYHSG+P ISN+GGSN V +G Sbjct 178 VQNTVTVEAVERIDASGFNNKVTYHSGTPSISNSGGSNVVGRG 220 >gi|41409900|ref|NP_962736.1| hypothetical protein MAP3802c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398733|gb|AAS06352.1| hypothetical protein MAP_3802c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336460237|gb|EGO39140.1| Protein of unknown function (DUF3060) [Mycobacterium avium subsp. paratuberculosis S397] Length=220 Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 123/228 (54%), Positives = 157/228 (69%), Gaps = 25/228 (10%) Query 10 MNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPP-----GPPPPPYSYGGPFGGP 64 M DDPE RIRELERPLAD ARASE G + PP P P P+SYGGP GP Sbjct 1 MAANDDPEERIRELERPLADSARASEQGSA-------PPTGPGYPPAPAPWSYGGPVPGP 53 Query 65 SPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRA------ 118 + SGNR WW++ ++ VGVL L GGIAAF+A +LS ++ SP P++SR Sbjct 54 PGQRPSGNRVWWVVGTLIAVGVLALTGGIAAFAAHQLSGVKSIINSP-PTISRTFGPPPG 112 Query 119 ---VPTPTAQ---PATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTS 172 P P+ P + P G LSV+G+N NRT+AC+D+ VSVSG+SNTVVITGHCTS Sbjct 113 ISTTPAPSTSRRTPTSPAAPPGTELSVAGINENRTLACDDNPVSVSGVSNTVVITGHCTS 172 Query 173 LTVSGMRNSVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 L+VSG++N+VTV++V+ I+A+GFNN+VTYHSG+P ISN+GGSN V +G Sbjct 173 LSVSGVQNTVTVEAVERIDASGFNNKVTYHSGTPSISNSGGSNVVGRG 220 >gi|118466590|ref|YP_883970.1| hypothetical protein MAV_4846 [Mycobacterium avium 104] gi|118167877|gb|ABK68774.1| conserved hypothetical protein [Mycobacterium avium 104] Length=220 Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 123/228 (54%), Positives = 156/228 (69%), Gaps = 25/228 (10%) Query 10 MNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPP-----GPPPPPYSYGGPFGGP 64 M DDPE RIRELERPLAD ARASE G + PP P P P+SYGGP GP Sbjct 1 MAANDDPEERIRELERPLADSARASEQG-------SAPPTGPGYPPAPAPWSYGGPVPGP 53 Query 65 SPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRA------ 118 + SGNR WW++ ++ VGVL L GGIAAF+A +LS ++ SP P++SR Sbjct 54 PGQRPSGNRVWWVVGTLIAVGVLALAGGIAAFAAHQLSGVKSIINSP-PTISRTFGPPPG 112 Query 119 ---VPTPTAQ---PATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTS 172 P P+ P + P G LSV+G+N NRT+AC+D+ VSVSG+SNTVVITGHCTS Sbjct 113 ISTTPAPSTSRRTPTSPAAPPGTELSVAGINENRTLACDDNPVSVSGVSNTVVITGHCTS 172 Query 173 LTVSGMRNSVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 L+VSG++N+VTV++V+ I A+GFNN+VTYHSG+P ISN+GGSN V +G Sbjct 173 LSVSGVQNTVTVEAVERIGASGFNNKVTYHSGTPSISNSGGSNVVGRG 220 >gi|296167686|ref|ZP_06849932.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897099|gb|EFG76712.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=230 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 112/231 (49%), Positives = 150/231 (65%), Gaps = 21/231 (9%) Query 10 MNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGPFGGPSPRSS 69 M DDPE RIRELERPLAD ARASE+G +Q GG Y PG PP +GGP P Sbjct 1 MAANDDPEDRIRELERPLADAARASEVGSAQPGGQPYSPGQAGPPPPPPWTYGGPFPGPP 60 Query 70 ----SGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVPTP--- 122 SGNR WWI+ V+ VGVL L GGIAAF+A +LS ++ SP P+ + P Sbjct 61 PQRPSGNRMWWIMGTVIAVGVLALAGGIAAFAAHQLSGVRSIISSP-PTFTNTFSPPGGT 119 Query 123 -------------TAQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGH 169 T + PP G+ +++SG+ NRT ACND++V+V+G+SNTVVI+GH Sbjct 120 VPSTTTRTRTPRSTTTSTSPTPPPGSQVTISGMGENRTFACNDNVVNVTGVSNTVVISGH 179 Query 170 CTSLTVSGMRNSVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 C +L VSG++N +TVD+VD+I+ +G +N+VTYHSG+PK+SN G +N V++G Sbjct 180 CANLAVSGVQNDITVDAVDSIDVSGLSNKVTYHSGTPKVSNTGSANVVERG 230 >gi|108797854|ref|YP_638051.1| hypothetical protein Mmcs_0879 [Mycobacterium sp. MCS] gi|119866948|ref|YP_936900.1| hypothetical protein Mkms_0896 [Mycobacterium sp. KMS] gi|126433494|ref|YP_001069185.1| hypothetical protein Mjls_0885 [Mycobacterium sp. JLS] gi|108768273|gb|ABG06995.1| putative conserved membrane protein [Mycobacterium sp. MCS] gi|119693037|gb|ABL90110.1| putative conserved membrane protein [Mycobacterium sp. KMS] gi|126233294|gb|ABN96694.1| putative conserved membrane protein [Mycobacterium sp. JLS] Length=233 Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 96/244 (40%), Positives = 126/244 (52%), Gaps = 38/244 (15%) Query 4 VWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGPFGG 63 +WEHL MNP+DDPEARIR+LERPLAD A+ SELG + YT PPP Y P Sbjct 1 MWEHLRMNPQDDPEARIRDLERPLADRAQTSELG---TQPYTVAGAYPPPVYDTPYPTA- 56 Query 64 PSPRSSSGNR--------------------AWWILAA-----VVVVGVLVLVGGIAAFSA 98 P P S ++ A + A V G + GG A Sbjct 57 PQPYSKGPSQTGVVVLVVVVLGLLVFGVGVAIYFAKAGPRDGAVTAGRPTIAGGGGALDE 116 Query 99 --QRLSQGNFVVLSPTPSVSRAVPTPTAQPATTLPPAGASLSVSGVNVNRTIACNDSIVS 156 + + G+ P V A P G SVSGV ++ +AC+DS++S Sbjct 117 TPEAPATGDL------PIVILPGGPSGGGGAVAQAPPGGQFSVSGVEGDKRVACDDSLIS 170 Query 157 VSGMSNTVVITGHCTSLTVSGMRNSVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNS 216 VSG+SNTV ITGHC S+TVSG+ N V V+S D I A+GF N VT+ +G P+I ++ G N Sbjct 171 VSGVSNTVTITGHCVSVTVSGVGNEVIVESADRISASGFENRVTFQTGDPQI-DSFGDNV 229 Query 217 VQQG 220 V++G Sbjct 230 VERG 233 >gi|145225704|ref|YP_001136382.1| hypothetical protein Mflv_5128 [Mycobacterium gilvum PYR-GCK] gi|145218190|gb|ABP47594.1| putative conserved membrane protein [Mycobacterium gilvum PYR-GCK] Length=238 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 96/246 (40%), Positives = 136/246 (56%), Gaps = 39/246 (15%) Query 4 VWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPP-PPYS------ 56 + +HL M P DPEARIR+LERPLAD ARASELG T+P G PP PPY Sbjct 1 MCQHLRMEPNGDPEARIRDLERPLADRARASELG-------THPYGAPPVPPYQDVALPP 53 Query 57 -----------YGGPFGGPSPR--SSSGNRAWWILAAVVVVGVLV-LVGGIAAFSAQR-- 100 YG P+ P R N A W++ VVVV + ++G +A FS+ Sbjct 54 MPPGVEHPAPVYGSPYYAPPQRVVHKRSNTALWLIPVVVVVVLAAGIIGIVAYFSSGTPD 113 Query 101 -------LSQGNFVVLSPTPSVSRAVPTPTAQPATTLPPAGASLSVSGVNVNRTIACNDS 153 +S G + +P P + T Q T +G +S+ GV N+TI C++ Sbjct 114 SYTYTPPVSGGGGPLDAPLPPQVQTRTDSTEQVITV--DSGGFVSIGGVEKNQTIVCDEG 171 Query 154 IVSVSGMSNTVVITGHCTSLTVSGMRNSVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGG 213 VS+SG++NT+ +TG C S+TVSG+ N+VTV+S TI A+GF+N VT+ +G P+ S +G Sbjct 172 TVSISGVNNTIEVTGRCGSVTVSGVDNTVTVESAGTISASGFHNRVTFLAGDPQTSTSGS 231 Query 214 SNSVQQ 219 N +++ Sbjct 232 GNVIER 237 >gi|169628269|ref|YP_001701918.1| hypothetical protein MAB_1176c [Mycobacterium abscessus ATCC 19977] gi|169240236|emb|CAM61264.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=208 Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 83/220 (38%), Positives = 125/220 (57%), Gaps = 23/220 (10%) Query 10 MNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGPFGGPSPRSS 69 M P+ DPEARIRELERPL++ A+ SELG Y P P Y P Sbjct 1 MEPDGDPEARIRELERPLSERAQRSELGAPSQSPY------PLPAYDTTQISRSPV---R 51 Query 70 SGNRAWWILAAVVVVGVLVLVGGIAAFSAQ-RLSQGNFVVLSPTPS---------VSRAV 119 + R + + AV+ G G+ ++A+ + QG V P+ + + RA Sbjct 52 TFRRRFLVFLAVITAGA----AGLVFYAAEPTIRQGGPTVSGPSGTRPARSTVVKIPRAT 107 Query 120 PTPTAQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMR 179 P+ TA P T PAG++ SV+G + N I+C+ VSVSG+S+TV I G+C +LTVSG+ Sbjct 108 PSSTAAPGPTFVPAGSTFSVAGTHKNVAISCDGCSVSVSGVSHTVEILGNCDTLTVSGVE 167 Query 180 NSVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQ 219 N+VTV++ I +G +N+VTY +G P+++ +G +N+V+Q Sbjct 168 NTVTVETAVKIGVSGIDNQVTYRTGEPQVAKSGNNNTVEQ 207 >gi|315446055|ref|YP_004078934.1| hypothetical protein Mspyr1_45480 [Mycobacterium sp. Spyr1] gi|315264358|gb|ADU01100.1| hypothetical protein Mspyr1_45480 [Mycobacterium sp. Spyr1] Length=232 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 94/240 (40%), Positives = 132/240 (55%), Gaps = 39/240 (16%) Query 10 MNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPP-PPYS------------ 56 M P DPEARIR+LERPLAD ARASELG T+P G PP PPY Sbjct 1 MEPNGDPEARIRDLERPLADRARASELG-------THPYGAPPVPPYQDVALPPMPPGVE 53 Query 57 -----YGGPFGGPSPR--SSSGNRAWWILAAVVVVGVLV-LVGGIAAFSAQR-------- 100 YG P+ P R N A W++ VVVV + ++G +A FS+ Sbjct 54 HPAPVYGSPYYAPPQRVVHKRSNTALWLIPVVVVVVLAAGIIGIVAYFSSGTPDSYTYTP 113 Query 101 -LSQGNFVVLSPTPSVSRAVPTPTAQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSG 159 +S G + +P P + T Q T +G +S+ GV N+TI C++ VS+SG Sbjct 114 PVSGGGGPLDAPLPPQVQTRTDSTEQVITV--DSGGFVSIGGVEKNQTIVCDEGTVSISG 171 Query 160 MSNTVVITGHCTSLTVSGMRNSVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQ 219 ++NT+ +TG C S+TVSG+ N+VTV+S TI A+GF+N VT+ +G P+ S +G N +++ Sbjct 172 VNNTIEVTGRCGSVTVSGVDNTVTVESAGTISASGFHNRVTFLAGDPQTSTSGSGNVIER 231 >gi|15839699|ref|NP_334736.1| hypothetical protein MT0328 [Mycobacterium tuberculosis CDC1551] gi|13879823|gb|AAK44550.1| hypothetical protein MT0328 [Mycobacterium tuberculosis CDC1551] Length=61 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 61/61 (100%), Positives = 61/61 (100%), Gaps = 0/61 (0%) Query 160 MSNTVVITGHCTSLTVSGMRNSVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQ 219 MSNTVVITGHCTSLTVSGMRNSVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQ Sbjct 1 MSNTVVITGHCTSLTVSGMRNSVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQ 60 Query 220 G 220 G Sbjct 61 G 61 >gi|118469764|ref|YP_889562.1| hypothetical protein MSMEG_5317 [Mycobacterium smegmatis str. MC2 155] gi|118171051|gb|ABK71947.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=248 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 89/251 (36%), Positives = 126/251 (51%), Gaps = 41/251 (16%) Query 4 VWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGP-----PPPPYSYG 58 + EHL M+P+DDPEARIR+LER LA+ RA ELG G+ P P P ++G Sbjct 1 MCEHLRMDPQDDPEARIRDLERSLAE--RAKELGTGADEGHAPPAPPPPPPTQPWTQTFG 58 Query 59 ------------------GPFGGPSPRSSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQR 100 F P + IL +V V V ++ GIAAF Sbjct 59 TAYPPPPPGPPAPWPGYAEDFPAPPRQHVPVAHTGRILMILVAVAVFLITTGIAAF---- 114 Query 101 LSQGNFVV--LSPT-------PSVSRAVPTPTAQPATTLPPA---GASLSVSGVNVNRTI 148 L N V L P P++ + P+ PA P G ++V+G + +R + Sbjct 115 LMFTNTVTSSLQPVADNPAGRPALPYSPPSNPVFPAIETPSVAGPGEVINVAGASNDREV 174 Query 149 ACNDSIVSVSGMSNTVVITGHCTSLTVSGMRNSVTVDSVDTIEAAGFNNEVTYHSGSPKI 208 C+ V VSG+ NT+ ITGHC ++T+SG+RN + VD DTI +GF N VTY SG P+I Sbjct 175 TCDGGTVMVSGVENTITITGHCAAVTISGIRNVIEVDEADTIGVSGFENRVTYSSGEPEI 234 Query 209 SNAGGSNSVQQ 219 + +G N+V++ Sbjct 235 TKSGMDNTVER 245 >gi|120402227|ref|YP_952056.1| hypothetical protein Mvan_1215 [Mycobacterium vanbaalenii PYR-1] gi|119955045|gb|ABM12050.1| putative conserved membrane protein [Mycobacterium vanbaalenii PYR-1] Length=233 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 90/240 (38%), Positives = 128/240 (54%), Gaps = 30/240 (12%) Query 4 VWEHLCMNPEDDPEARIRELERPLADVARASELG-----GSQSGGYTYPPGPPPPPYSYG 58 + +HL M P DPEARIR+LERPLAD A A+ELG PP P PP YG Sbjct 1 MCKHLPMEPSGDPEARIRDLERPLADQAAANELGTHAYQDVAPPTTPVPPYPYPPYAQYG 60 Query 59 GPFGGPSPR---SSSGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTP-- 113 P+ P R S A W++ VVV ++ + F + G+ +P P Sbjct 61 SPYYAPPQRVVDKRSHTTALWLIPLVVVGAIVAGAVAVVVF----FNTGSPDSATPIPVP 116 Query 114 -------------SVSRAVPTPTAQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGM 160 SV + + T Q T +G +S+ GV +T+ C+D V++SG+ Sbjct 117 PISGGGGPLDPPPSVQTRIES-TEQIVTV--ESGGFVSLGGVETRQTVVCDDGTVNISGV 173 Query 161 SNTVVITGHCTSLTVSGMRNSVTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 +NT+ + G CT +TVSG+ N+VTV+S DTI A+GF+N VTY +G+P+IS +G N V+ G Sbjct 174 NNTIEVQGACTMVTVSGVENTVTVESADTISASGFDNRVTYRTGTPEISKSGRGNVVEPG 233 >gi|333990177|ref|YP_004522791.1| hypothetical protein JDM601_1537 [Mycobacterium sp. JDM601] gi|333486145|gb|AEF35537.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=199 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 81/219 (37%), Positives = 112/219 (52%), Gaps = 28/219 (12%) Query 10 MNPEDDPEARIRELERPLADVARASELGGSQSGGYTYPPGPPPPPYSYGGPFGGPSPRSS 69 M+ +DDPEARIRELERPL+D A+A+E+ S +G P + Sbjct 1 MSADDDPEARIRELERPLSDFAKAAEVTVSSAGAEQVSP--------------------T 40 Query 70 SGNRAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNF-------VVLSPTPSVSR-AVPT 121 +GN +A + V V V A F R G +PTPS S VP Sbjct 41 AGNGRGVGVAVRAMAAVFVTVAAAAMFLISRGPTGTTPGFPTVPSTAAPTPSRSVPVVPP 100 Query 122 PTAQPATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRNS 181 +A PA P +++VSG ++T+AC + VSVSG+ NT+ +TG C LTVSG+ N Sbjct 101 ASASPANPTPGRADTITVSGAGQDKTLACAGNQVSVSGVRNTITLTGRCAGLTVSGIGNV 160 Query 182 VTVDSVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 +TVD I +G +N VTY G P++S +G N V +G Sbjct 161 ITVDFTPAITTSGVDNRVTYRFGDPEVSTSGFDNVVVRG 199 >gi|296167814|ref|ZP_06850000.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897044|gb|EFG76664.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=174 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 47/92 (52%), Positives = 66/92 (72%), Gaps = 1/92 (1%) Query 129 TLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRNSVTVDSVD 188 T+P +G +L V+G +T+ C+ +SVSG +NTV +TGHCTS+TVSG N V VDS D Sbjct 84 TVPESG-TLQVNGTGTTKTVGCHGGYLSVSGQANTVTVTGHCTSVTVSGHDNRVAVDSAD 142 Query 189 TIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 + +G +N VTYH GSP ++NAG +N+V+QG Sbjct 143 AVSTSGTSNAVTYHWGSPNVANAGTANTVKQG 174 >gi|41409950|ref|NP_962786.1| hypothetical protein MAP3852c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398783|gb|AAS06402.1| hypothetical protein MAP_3852c [Mycobacterium avium subsp. paratuberculosis K-10] Length=195 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 49/95 (52%), Positives = 63/95 (67%), Gaps = 1/95 (1%) Query 126 PATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRNSVTVD 185 PA +P AG +L VSG +++ C+ +SVSG NTV +TGHCTS++VSG N + VD Sbjct 102 PAPVVPEAG-TLQVSGAGTTKSLPCHAGYLSVSGKDNTVTLTGHCTSVSVSGNGNRIAVD 160 Query 186 SVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 S D + AAG N V YH GSPK+ NAG N V+QG Sbjct 161 SSDAVSAAGAGNVVVYHWGSPKVVNAGSGNVVRQG 195 >gi|336460295|gb|EGO39196.1| Protein of unknown function (DUF3060) [Mycobacterium avium subsp. paratuberculosis S397] Length=164 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 49/95 (52%), Positives = 63/95 (67%), Gaps = 1/95 (1%) Query 126 PATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRNSVTVD 185 PA +P AG +L VSG +++ C+ +SVSG NTV +TGHCTS++VSG N + VD Sbjct 71 PAPVVPEAG-TLQVSGAGTTKSLPCHAGYLSVSGKDNTVTLTGHCTSVSVSGNGNRIAVD 129 Query 186 SVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 S D + AAG N V YH GSPK+ NAG N V+QG Sbjct 130 SSDAVSAAGAGNVVVYHWGSPKVVNAGSGNVVRQG 164 >gi|342859151|ref|ZP_08715805.1| hypothetical protein MCOL_09743 [Mycobacterium colombiense CECT 3035] gi|342133392|gb|EGT86595.1| hypothetical protein MCOL_09743 [Mycobacterium colombiense CECT 3035] Length=147 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 47/95 (50%), Positives = 65/95 (69%), Gaps = 1/95 (1%) Query 126 PATTLPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRNSVTVD 185 P+TT+P +G +L VSG + +TI C+ +SVSG N + +TGHCTS++VSG N V VD Sbjct 54 PSTTVPDSG-TLQVSGTGMTKTIPCHAGYLSVSGQKNAITLTGHCTSVSVSGSGNRVAVD 112 Query 186 SVDTIEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 S D + A+G N + YH GSPK+ N G +N V+QG Sbjct 113 SADAVSASGTGNVLLYHWGSPKVDNVGTANVVRQG 147 >gi|254777231|ref|ZP_05218747.1| hypothetical protein MaviaA2_21539 [Mycobacterium avium subsp. avium ATCC 25291] Length=156 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 47/91 (52%), Positives = 61/91 (68%), Gaps = 1/91 (1%) Query 130 LPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRNSVTVDSVDT 189 +P AG +L VSG +++ C+ +SVSG NTV +TGHCTS++VSG N + VDS D Sbjct 67 VPEAG-TLQVSGAGTTKSLPCHAGYLSVSGKDNTVTLTGHCTSVSVSGNGNRIAVDSSDA 125 Query 190 IEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 + AAG N V YH GSPK+ NAG N V+QG Sbjct 126 VSAAGAGNVVVYHWGSPKVVNAGSGNVVRQG 156 >gi|118464376|ref|YP_883921.1| hypothetical protein MAV_4794 [Mycobacterium avium 104] gi|118165663|gb|ABK66560.1| conserved hypothetical protein [Mycobacterium avium 104] Length=164 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 47/91 (52%), Positives = 61/91 (68%), Gaps = 1/91 (1%) Query 130 LPPAGASLSVSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRNSVTVDSVDT 189 +P AG +L VSG +++ C+ +SVSG NTV +TGHCTS++VSG N + VDS D Sbjct 75 VPEAG-TLQVSGAGTTKSLPCHAGYLSVSGKDNTVTLTGHCTSVSVSGNGNRIAVDSSDA 133 Query 190 IEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 + AAG N V YH GSPK+ NAG N V+QG Sbjct 134 VSAAGAGNVVVYHWGSPKVVNAGSGNVVRQG 164 >gi|296168530|ref|ZP_06850335.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896672|gb|EFG76310.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=82 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 30/67 (45%), Positives = 42/67 (63%), Gaps = 1/67 (1%) Query 155 VSVSGMSNTVVITGHCTSLTVSGMRNSVTVDSVDT-IEAAGFNNEVTYHSGSPKISNAGG 213 ++V G NT+ +TG C +LTV G N +T+D VDT I G NN +TY G PK+ N G Sbjct 15 LNVGGSDNTLTVTGDCATLTVGGTNNKITLDKVDTRISVVGLNNTITYKDGEPKVDNLGS 74 Query 214 SNSVQQG 220 N++ +G Sbjct 75 GNTISKG 81 >gi|41410235|ref|NP_963071.1| hypothetical protein MAP4137c [Mycobacterium avium subsp. paratuberculosis K-10] gi|254776931|ref|ZP_05218447.1| hypothetical protein MaviaA2_20001 [Mycobacterium avium subsp. avium ATCC 25291] gi|41399069|gb|AAS06687.1| hypothetical protein MAP_4137c [Mycobacterium avium subsp. paratuberculosis K-10] Length=161 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/67 (45%), Positives = 41/67 (62%), Gaps = 1/67 (1%) Query 155 VSVSGMSNTVVITGHCTSLTVSGMRNSVTVDSVDT-IEAAGFNNEVTYHSGSPKISNAGG 213 ++V G NT+ +TG C S TVSG N +T D V+T I G NN +TY G PK+ G Sbjct 94 LNVGGSDNTLTVTGTCESATVSGTNNKITFDKVNTRITVLGMNNTITYKDGDPKVDKIGQ 153 Query 214 SNSVQQG 220 SN++ +G Sbjct 154 SNTINKG 160 >gi|336460543|gb|EGO39436.1| Protein of unknown function (DUF3060) [Mycobacterium avium subsp. paratuberculosis S397] Length=160 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/67 (45%), Positives = 41/67 (62%), Gaps = 1/67 (1%) Query 155 VSVSGMSNTVVITGHCTSLTVSGMRNSVTVDSVDT-IEAAGFNNEVTYHSGSPKISNAGG 213 ++V G NT+ +TG C S TVSG N +T D V+T I G NN +TY G PK+ G Sbjct 93 LNVGGSDNTLTVTGTCESATVSGTNNKITFDKVNTRITVLGMNNTITYKDGDPKVDKIGQ 152 Query 214 SNSVQQG 220 SN++ +G Sbjct 153 SNTINKG 159 >gi|118465299|ref|YP_883630.1| hypothetical protein MAV_4496 [Mycobacterium avium 104] gi|118166586|gb|ABK67483.1| conserved hypothetical protein [Mycobacterium avium 104] Length=144 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/67 (45%), Positives = 41/67 (62%), Gaps = 1/67 (1%) Query 155 VSVSGMSNTVVITGHCTSLTVSGMRNSVTVDSVDT-IEAAGFNNEVTYHSGSPKISNAGG 213 ++V G NT+ +TG C S TVSG N +T D V+T I G NN +TY G PK+ G Sbjct 77 LNVGGSDNTLTVTGTCESATVSGTNNKITFDKVNTRITVLGMNNTITYKDGDPKVDKIGQ 136 Query 214 SNSVQQG 220 SN++ +G Sbjct 137 SNTINKG 143 >gi|183981029|ref|YP_001849320.1| hypothetical protein MMAR_1008 [Mycobacterium marinum M] gi|183174355|gb|ACC39465.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=158 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 28/89 (32%), Positives = 50/89 (57%), Gaps = 2/89 (2%) Query 134 GASLSVSGVNVNRTIACND-SIVSVSGMSNTVVITGHCTSLTVSGMRNSVTVDSVDT-IE 191 G L+ + T+ C D ++V+G N + +TG C ++T+ G N +T D +D + Sbjct 70 GNMLNYGSIGTTATLDCADGKSLNVAGSENNLTVTGTCATVTIGGTNNKITFDKIDQRLT 129 Query 192 AAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 G +N +TY +G PK+ N G N++++G Sbjct 130 VLGIDNTITYKAGEPKVDNIGSGNNIEKG 158 >gi|115373650|ref|ZP_01460945.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1] gi|310824904|ref|YP_003957262.1| hypothetical protein STAUR_7680 [Stigmatella aurantiaca DW4/3-1] gi|115369353|gb|EAU68293.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1] gi|309397976|gb|ADO75435.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length=173 Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 33/91 (37%), Positives = 53/91 (59%), Gaps = 6/91 (6%) Query 135 ASLSVSGVNVNRTIACNDSI-VSVSGMSNTVVITGHCTSLTVSGMRNSVTVDSVDTIEAA 193 + + ++G T+ACN + VS+SG SN + TG C + V+G N VT+D+V+ I+ Sbjct 82 SEIDITGAGRKETLACNGTTEVSISGSSNELTFTGACKRVDVTGSSNKVTLDAVERIDVT 141 Query 194 GFNNEVTYHSGS-----PKISNAGGSNSVQQ 219 G N VT+ G+ P++S+ G N+V Q Sbjct 142 GTGNTVTWKKGAGGRKKPRVSSTGTDNTVSQ 172 >gi|254822765|ref|ZP_05227766.1| hypothetical protein MintA_22739 [Mycobacterium intracellulare ATCC 13950] Length=150 Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 25/67 (38%), Positives = 42/67 (63%), Gaps = 1/67 (1%) Query 155 VSVSGMSNTVVITGHCTSLTVSGMRNSVTVDSVDT-IEAAGFNNEVTYHSGSPKISNAGG 213 ++V+G NT+ +TG C+++ + G N +T+D V+ I G NN +TY G PK+ N G Sbjct 83 LNVAGSDNTLTVTGSCSTVNIGGTNNKITLDKVEKRITVLGMNNTITYKDGDPKVDNLGS 142 Query 214 SNSVQQG 220 N++ +G Sbjct 143 DNTINKG 149 >gi|342858836|ref|ZP_08715490.1| hypothetical protein MCOL_08168 [Mycobacterium colombiense CECT 3035] gi|342133077|gb|EGT86280.1| hypothetical protein MCOL_08168 [Mycobacterium colombiense CECT 3035] Length=161 Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 28/67 (42%), Positives = 40/67 (60%), Gaps = 1/67 (1%) Query 155 VSVSGMSNTVVITGHCTSLTVSGMRNSVTVDSVDT-IEAAGFNNEVTYHSGSPKISNAGG 213 ++V G N + +TG C + TVSG N +T D V+T I G NN +TY G PK+ G Sbjct 94 LNVGGSDNNLTVTGTCETATVSGTNNKITFDKVNTRITVLGMNNTITYKDGDPKVDKIGQ 153 Query 214 SNSVQQG 220 SN++ +G Sbjct 154 SNTINKG 160 >gi|240167676|ref|ZP_04746335.1| hypothetical protein MkanA1_00070 [Mycobacterium kansasii ATCC 12478] Length=88 Score = 58.5 bits (140), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 27/76 (36%), Positives = 45/76 (60%), Gaps = 2/76 (2%) Query 147 TIACND-SIVSVSGMSNTVVITGHCTSLTVSGMRNSVTVDSVDT-IEAAGFNNEVTYHSG 204 T+ C D ++V+G NT+ + G C+++T+ G N +T D +D + G NN +TY G Sbjct 12 TLDCADGKSLNVAGSENTLTVNGTCSTVTIGGTNNKITFDKIDQHLSVLGLNNTITYKDG 71 Query 205 SPKISNAGGSNSVQQG 220 PK+ N G N++ +G Sbjct 72 DPKVDNIGSGNTINKG 87 >gi|118616544|ref|YP_904876.1| hypothetical protein MUL_0760 [Mycobacterium ulcerans Agy99] gi|118568654|gb|ABL03405.1| conserved hypothetical membrane protein [Mycobacterium ulcerans Agy99] Length=129 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/121 (31%), Positives = 62/121 (52%), Gaps = 11/121 (9%) Query 111 PTPSVSRAVPT--PTAQPATTLPPA-------GASLSVSGVNVNRTIACND-SIVSVSGM 160 P+ + A PT PTA P+T+ P G L+ + T+ D ++V+G Sbjct 9 PSSTSGSATPTSGPTAAPSTSGGPTTTASIEIGNMLNYGSIGTTATLDRADGKSLNVAGS 68 Query 161 SNTVVITGHCTSLTVSGMRNSVTVDSVDT-IEAAGFNNEVTYHSGSPKISNAGGSNSVQQ 219 N + +TG C ++T+ G N +T D +D + G +N +TY +G PK+ N G N+++ Sbjct 69 GNNLTVTGTCATVTIGGTNNKITFDKIDQRLTVLGIDNTITYKAGEPKVDNIGSGNNIEN 128 Query 220 G 220 G Sbjct 129 G 129 >gi|118472451|ref|YP_885779.1| hypothetical protein MSMEG_1393 [Mycobacterium smegmatis str. MC2 155] gi|118173738|gb|ABK74634.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=136 Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 33/103 (33%), Positives = 53/103 (52%), Gaps = 2/103 (1%) Query 120 PTPTAQPATTLPPAGASLSVSGVNVNRTIACND-SIVSVSGMSNTVVITGHCTSLTVSGM 178 P+ TA + G +++ V I C D ++V G +NT+ + G C ++ + G Sbjct 34 PSATAGSSGVNVEIGNTINYMSVGTTADIDCADGKSLTVGGANNTLTVKGTCANVNIGGS 93 Query 179 RNSVTVDSVDT-IEAAGFNNEVTYHSGSPKISNAGGSNSVQQG 220 N +T + +D + G NN +TY G PKI+N G NSV +G Sbjct 94 DNKITFEKIDKDLTVVGLNNTITYRDGDPKINNTGSGNSVSKG 136 >gi|315446010|ref|YP_004078889.1| hypothetical protein Mspyr1_45000 [Mycobacterium sp. Spyr1] gi|315264313|gb|ADU01055.1| hypothetical protein Mspyr1_45000 [Mycobacterium sp. Spyr1] Length=125 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 32/75 (43%), Positives = 46/75 (62%), Gaps = 1/75 (1%) Query 139 VSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRNSVTVDSV-DTIEAAGFNN 197 ++GV V RTI C DS + V+G N V G+C ++TV G N V VDSV + I G++ Sbjct 37 ITGVGVVRTIDCKDSTLFVNGNGNQVFAIGNCYAVTVQGSSNLVVVDSVANDITVYGWDQ 96 Query 198 EVTYHSGSPKISNAG 212 +V Y +GSP + + G Sbjct 97 KVFYKNGSPFVWDRG 111 >gi|120402285|ref|YP_952114.1| hypothetical protein Mvan_1274 [Mycobacterium vanbaalenii PYR-1] gi|119955103|gb|ABM12108.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=133 Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 40/138 (29%), Positives = 67/138 (49%), Gaps = 13/138 (9%) Query 87 LVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVPTPTAQPATTLPPA--GASLSVSGVNV 144 L ++G +AA + V LS S S +PTA T+ G +++ Sbjct 5 LGVIGCLAALT---------VGLSACGSTSDDTNSPTATAGTSGAQVEIGNTINYGSFGT 55 Query 145 NRTIACND-SIVSVSGMSNTVVITGHCTSLTVSGMRNSVTVDSVDT-IEAAGFNNEVTYH 202 I C D ++V G +NT+ + G C ++ + G N ++ + VD + G NN VTY Sbjct 56 TADIDCADGKSLNVGGSNNTLTVKGTCANVNIGGADNKISFERVDAELSVVGLNNTVTYR 115 Query 203 SGSPKISNAGGSNSVQQG 220 G PK+++ G +NS+ +G Sbjct 116 DGDPKVNDTGSNNSISRG 133 >gi|289568620|ref|ZP_06448847.1| conserved threonine rich protein [Mycobacterium tuberculosis T17] gi|289542374|gb|EFD46022.1| conserved threonine rich protein [Mycobacterium tuberculosis T17] Length=167 Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 33/103 (33%), Positives = 51/103 (50%), Gaps = 3/103 (2%) Query 120 PTPTAQPATTLP-PAGASLSVSGVNVNRTIACND-SIVSVSGMSNTVVITGHCTSLTVSG 177 PT T +TT G L+ + T+ C D ++V+G NT+ + G C ++TV G Sbjct 64 PTVTTGESTTASIQIGDMLTYGSIGTTATLDCADGKSLNVAGSDNTLTVNGTCETVTVGG 123 Query 178 MRNSVTVDSVDT-IEAAGFNNEVTYHSGSPKISNAGGSNSVQQ 219 N + D +D + G +N VTY +G P I N G N + + Sbjct 124 ANNKIAFDRIDERLVVVGLDNTVTYKNGDPTIDNLGAGNRINK 166 >gi|183981030|ref|YP_001849321.1| hypothetical protein MMAR_1009 [Mycobacterium marinum M] gi|183174356|gb|ACC39466.1| conserved hypothetical transmembrane protein [Mycobacterium marinum M] Length=125 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/75 (39%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query 139 VSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRNSVTVDS-VDTIEAAGFNN 197 V+G + RT+ CNDS + V+G N + G C ++TV G N+V D+ V+ I A G++ Sbjct 37 VTGEGIVRTLDCNDSTLFVNGTGNIITAKGTCWAVTVMGSSNTVVADTVVNDITAYGWDE 96 Query 198 EVTYHSGSPKISNAG 212 V +H+G P I + G Sbjct 97 TVFFHNGDPFIWDRG 111 >gi|118616545|ref|YP_904877.1| hypothetical protein MUL_0761 [Mycobacterium ulcerans Agy99] gi|118568655|gb|ABL03406.1| conserved hypothetical transmembrane protein [Mycobacterium ulcerans Agy99] Length=125 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/75 (39%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query 139 VSGVNVNRTIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRNSVTVDS-VDTIEAAGFNN 197 V+G + RT+ CNDS + V+G N + G C ++TV G N+V D+ V+ I A G++ Sbjct 37 VTGEGIVRTLDCNDSALFVNGTGNIITAKGTCWAVTVMGSSNTVVADTVVNDITAYGWDE 96 Query 198 EVTYHSGSPKISNAG 212 V +H+G P I + G Sbjct 97 TVFFHNGDPFIWDRG 111 >gi|169630932|ref|YP_001704581.1| hypothetical protein MAB_3853 [Mycobacterium abscessus ATCC 19977] gi|169242899|emb|CAM63927.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=126 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/67 (42%), Positives = 39/67 (59%), Gaps = 1/67 (1%) Query 147 TIACNDSIVSVSGMSNTVVITGHCTSLTVSGMRNSVTVDS-VDTIEAAGFNNEVTYHSGS 205 TI CNDS V V+G N + G C +++V G N++ D+ V+ I GFN +V Y SG Sbjct 46 TIDCNDSTVFVNGSQNVITALGSCYAISVQGSHNTIIADNVVNDITVYGFNQKVLYKSGE 105 Query 206 PKISNAG 212 P I + G Sbjct 106 PAIIDRG 112 Lambda K H 0.312 0.130 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 273402666736 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40