BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0333 Length=124 Score E Sequences producing significant alignments: (Bits) Value gi|15607474|ref|NP_214847.1| hypothetical protein Rv0333 [Mycoba... 242 1e-62 gi|339630406|ref|YP_004722048.1| hypothetical protein MAF_03350 ... 241 3e-62 gi|183980631|ref|YP_001848922.1| hypothetical protein MMAR_0605 ... 192 1e-47 gi|118616388|ref|YP_904720.1| hypothetical protein MUL_0567 [Myc... 192 1e-47 gi|296167786|ref|ZP_06849974.1| conserved hypothetical protein [... 192 2e-47 gi|240172293|ref|ZP_04750952.1| hypothetical protein MkanA1_2346... 192 2e-47 gi|254777256|ref|ZP_05218772.1| hypothetical protein MaviaA2_216... 189 1e-46 gi|118462935|ref|YP_883946.1| hypothetical protein MAV_4821 [Myc... 188 2e-46 gi|336460286|gb|EGO39188.1| hypothetical protein MAPs_42330 [Myc... 187 3e-46 gi|254820175|ref|ZP_05225176.1| hypothetical protein MintA_09621... 174 5e-42 gi|342859171|ref|ZP_08715825.1| hypothetical protein MCOL_09843 ... 167 4e-40 gi|118468757|ref|YP_885091.1| hypothetical protein MSMEG_0683 [M... 156 1e-36 gi|226306470|ref|YP_002766430.1| hypothetical protein RER_29830 ... 149 2e-34 gi|229493636|ref|ZP_04387421.1| conserved hypothetical protein [... 148 3e-34 gi|226364227|ref|YP_002782009.1| hypothetical protein ROP_48170 ... 146 1e-33 gi|254230698|ref|ZP_04924025.1| hypothetical protein TBCG_00328 ... 143 7e-33 gi|111021691|ref|YP_704663.1| hypothetical protein RHA1_ro04719 ... 137 5e-31 gi|108797415|ref|YP_637612.1| hypothetical protein Mmcs_0435 [My... 136 8e-31 gi|312138232|ref|YP_004005568.1| hypothetical protein REQ_07670 ... 135 3e-30 gi|333988966|ref|YP_004521580.1| hypothetical protein JDM601_032... 133 8e-30 gi|41409925|ref|NP_962761.1| hypothetical protein MAP3827 [Mycob... 119 2e-25 gi|120401618|ref|YP_951447.1| hypothetical protein Mvan_0602 [My... 114 4e-24 gi|145220890|ref|YP_001131568.1| hypothetical protein Mflv_0286 ... 105 2e-21 gi|333918335|ref|YP_004491916.1| hypothetical protein AS9A_0662 ... 102 2e-20 gi|345013763|ref|YP_004816117.1| hypothetical protein Strvi_6390... 41.6 0.045 gi|323488243|ref|ZP_08093493.1| hypothetical protein GPDM_02825 ... 41.2 0.050 gi|294678922|ref|YP_003579537.1| chaperone ClpB [Rhodobacter cap... 37.4 0.70 gi|123472364|ref|XP_001319376.1| ankyrin repeat protein [Trichom... 37.0 0.95 gi|120401265|ref|YP_951094.1| hypothetical protein Mvan_0239 [My... 36.6 1.2 gi|167621787|ref|YP_001676572.1| hypothetical protein Caul_5138 ... 35.4 3.2 gi|297563794|ref|YP_003682767.1| hypothetical protein Ndas_4878 ... 34.7 4.4 gi|85860860|ref|YP_463062.1| antibiotic export ATP-binding prote... 34.7 4.8 >gi|15607474|ref|NP_214847.1| hypothetical protein Rv0333 [Mycobacterium tuberculosis H37Rv] gi|31791511|ref|NP_854004.1| hypothetical protein Mb0340 [Mycobacterium bovis AF2122/97] gi|121636247|ref|YP_976470.1| hypothetical protein BCG_0372 [Mycobacterium bovis BCG str. Pasteur 1173P2] 70 more sequence titles Length=124 Score = 242 bits (618), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 124/124 (100%), Positives = 124/124 (100%), Gaps = 0/124 (0%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL Sbjct 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 Query 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED Sbjct 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 Query 121 DLVD 124 DLVD Sbjct 121 DLVD 124 >gi|339630406|ref|YP_004722048.1| hypothetical protein MAF_03350 [Mycobacterium africanum GM041182] gi|339329762|emb|CCC25407.1| hypothetical protein MAF_03350 [Mycobacterium africanum GM041182] Length=124 Score = 241 bits (614), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 123/124 (99%), Positives = 124/124 (100%), Gaps = 0/124 (0%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGA+QGHDALRGWASSLTTTAEL Sbjct 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGALQGHDALRGWASSLTTTAEL 60 Query 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED Sbjct 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 Query 121 DLVD 124 DLVD Sbjct 121 DLVD 124 >gi|183980631|ref|YP_001848922.1| hypothetical protein MMAR_0605 [Mycobacterium marinum M] gi|183173957|gb|ACC39067.1| conserved protein [Mycobacterium marinum M] Length=124 Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 99/124 (80%), Positives = 108/124 (88%), Gaps = 0/124 (0%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 MTTSEIATVLAW DALNAADI+TLVALS+DDIDIGDAHGA QGH+ALR WASSL TTAE+ Sbjct 1 MTTSEIATVLAWSDALNAADIDTLVALSSDDIDIGDAHGAAQGHEALRRWASSLQTTAEM 60 Query 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 GRMYVH GVVVVEQ+I +DP A+AFRVV+DHV SVFRH+DLASALAATELTE Sbjct 61 GRMYVHDGVVVVEQRIIGRDDPDSVANAASAFRVVRDHVTSVFRHDDLASALAATELTEA 120 Query 121 DLVD 124 DLVD Sbjct 121 DLVD 124 >gi|118616388|ref|YP_904720.1| hypothetical protein MUL_0567 [Mycobacterium ulcerans Agy99] gi|118568498|gb|ABL03249.1| conserved protein [Mycobacterium ulcerans Agy99] Length=127 Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 99/124 (80%), Positives = 108/124 (88%), Gaps = 0/124 (0%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 MTTSEIATVLAW DALNAADI+TLVALS+DDIDIGDAHGA QGH+ALR WASSL TTAE+ Sbjct 4 MTTSEIATVLAWSDALNAADIDTLVALSSDDIDIGDAHGAAQGHEALRRWASSLQTTAEM 63 Query 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 GRMYVH GVVVVEQ+I +DP A+AFRVV+DHV SVFRH+DLASALAATELTE Sbjct 64 GRMYVHDGVVVVEQRIIGRDDPDNVANAASAFRVVRDHVTSVFRHDDLASALAATELTEA 123 Query 121 DLVD 124 DLVD Sbjct 124 DLVD 127 >gi|296167786|ref|ZP_06849974.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897059|gb|EFG76677.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=124 Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 97/124 (79%), Positives = 108/124 (88%), Gaps = 0/124 (0%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 MTTSEIATVLAWHDALNAAD++TLVALS+DDI+IGDAHGA QGHDALR WA+S TAEL Sbjct 1 MTTSEIATVLAWHDALNAADLDTLVALSSDDIEIGDAHGAAQGHDALRRWAASRQGTAEL 60 Query 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 GRMYVH GVVV EQK+++ ++PG T A AFRVV DHV SVFRHEDLASALAATELTE Sbjct 61 GRMYVHDGVVVAEQKVSAADNPGAVATAALAFRVVHDHVTSVFRHEDLASALAATELTES 120 Query 121 DLVD 124 DLV+ Sbjct 121 DLVN 124 >gi|240172293|ref|ZP_04750952.1| hypothetical protein MkanA1_23461 [Mycobacterium kansasii ATCC 12478] Length=124 Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 97/124 (79%), Positives = 110/124 (89%), Gaps = 0/124 (0%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 MTTSEIATVLAWHDALNA D+ETLV+LS+DDIDIGDAHGAVQGH+ALR WA S+ AEL Sbjct 1 MTTSEIATVLAWHDALNAGDVETLVSLSSDDIDIGDAHGAVQGHEALRRWAGSVMVAAEL 60 Query 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 G+MYVH GVVVVEQ+IT +DPG T A+AFRVV+DHV +VFRH+DLASALAATELT+D Sbjct 61 GQMYVHDGVVVVEQEITGRDDPGAVTTTASAFRVVRDHVTAVFRHDDLASALAATELTDD 120 Query 121 DLVD 124 DLVD Sbjct 121 DLVD 124 >gi|254777256|ref|ZP_05218772.1| hypothetical protein MaviaA2_21664 [Mycobacterium avium subsp. avium ATCC 25291] Length=124 Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 95/124 (77%), Positives = 108/124 (88%), Gaps = 0/124 (0%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 MTTSEIATVLAWHDALNA+D++TL+ALS+DDI+IGDAHGA QGH+ALR WA++ TAEL Sbjct 1 MTTSEIATVLAWHDALNASDLDTLIALSSDDIEIGDAHGAAQGHEALRNWAAARRGTAEL 60 Query 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 GRMYVH GVVVVEQK+TS +DPG T A+AFRVV D V SVFRH+ LASALAATELTED Sbjct 61 GRMYVHDGVVVVEQKVTSPDDPGAVSTAASAFRVVHDRVTSVFRHDSLASALAATELTED 120 Query 121 DLVD 124 D VD Sbjct 121 DAVD 124 >gi|118462935|ref|YP_883946.1| hypothetical protein MAV_4821 [Mycobacterium avium 104] gi|118164222|gb|ABK65119.1| conserved hypothetical protein [Mycobacterium avium 104] Length=124 Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 95/124 (77%), Positives = 107/124 (87%), Gaps = 0/124 (0%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 MTTSEIATVLAWHDALNA+D++TL+ALS+DDI+IGDAHGA QGH+ALR WA + TAEL Sbjct 1 MTTSEIATVLAWHDALNASDLDTLIALSSDDIEIGDAHGAAQGHEALRNWAGARRGTAEL 60 Query 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 GRMYVH GVVVVEQK+TS +DPG T A+AFRVV D V SVFRH+ LASALAATELTED Sbjct 61 GRMYVHDGVVVVEQKVTSPDDPGAVTTAASAFRVVHDRVTSVFRHDSLASALAATELTED 120 Query 121 DLVD 124 D VD Sbjct 121 DAVD 124 >gi|336460286|gb|EGO39188.1| hypothetical protein MAPs_42330 [Mycobacterium avium subsp. paratuberculosis S397] Length=124 Score = 187 bits (476), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 94/124 (76%), Positives = 106/124 (86%), Gaps = 0/124 (0%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 MTTSEIATVLAWHDALNA+D++TL+ALS+DDI+IGDAHGA QGH+ALR WA++ TAEL Sbjct 1 MTTSEIATVLAWHDALNASDLDTLIALSSDDIEIGDAHGAAQGHEALRNWAAARRGTAEL 60 Query 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 GRMYVH GV VVEQK+TS +DPG T A+AFRVV D V SVFRH LASALAATELTED Sbjct 61 GRMYVHDGVAVVEQKVTSPDDPGAVSTAASAFRVVHDRVTSVFRHNSLASALAATELTED 120 Query 121 DLVD 124 D VD Sbjct 121 DAVD 124 >gi|254820175|ref|ZP_05225176.1| hypothetical protein MintA_09621 [Mycobacterium intracellulare ATCC 13950] Length=124 Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 91/124 (74%), Positives = 99/124 (80%), Gaps = 0/124 (0%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 MTTSEIATVLAWHDALNAADIETL +LS+DDI++GDAHGA QGH+ALR WA+S EL Sbjct 1 MTTSEIATVLAWHDALNAADIETLASLSSDDIEMGDAHGAAQGHEALRSWAASHRPATEL 60 Query 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 GRMYVH GVV VE K S DPG A A FRVV+DHV SVFRH+ LASALAATELTE Sbjct 61 GRMYVHDGVVAVELKPGSTGDPGAATDAALTFRVVRDHVTSVFRHDSLASALAATELTES 120 Query 121 DLVD 124 D VD Sbjct 121 DAVD 124 >gi|342859171|ref|ZP_08715825.1| hypothetical protein MCOL_09843 [Mycobacterium colombiense CECT 3035] gi|342133412|gb|EGT86615.1| hypothetical protein MCOL_09843 [Mycobacterium colombiense CECT 3035] Length=123 Score = 167 bits (424), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 89/124 (72%), Positives = 100/124 (81%), Gaps = 1/124 (0%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 MTTSEIATVLAWHDALN+ DI+TL ALS+DDI+IGDAHGA QGH+ALR WASS +L Sbjct 1 MTTSEIATVLAWHDALNSDDIDTLTALSSDDIEIGDAHGAAQGHEALRNWASSHRANTQL 60 Query 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 G+MYVH GVVV EQK + PG A T A AFRVV+DHV SVFRH+ LASALAATELTE Sbjct 61 GQMYVHDGVVVAEQKPGGPDGPG-ATTDALAFRVVRDHVTSVFRHDSLASALAATELTES 119 Query 121 DLVD 124 D V+ Sbjct 120 DAVE 123 >gi|118468757|ref|YP_885091.1| hypothetical protein MSMEG_0683 [Mycobacterium smegmatis str. MC2 155] gi|118170044|gb|ABK70940.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=122 Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 83/122 (69%), Positives = 95/122 (78%), Gaps = 2/122 (1%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 MTTSEIATVLAWHDALN D +TLV+LS+DDI++GD GAVQGH ALR WA + + Sbjct 1 MTTSEIATVLAWHDALNDKDFDTLVSLSSDDIEVGDTSGAVQGHAALRRWAEAAGISVTP 60 Query 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 GRMYVH GVVV EQ IT + G GA+AFRVV+DHV SVFRH+DLASALAAT+L ED Sbjct 61 GRMYVHDGVVVAEQTITCAD--GSTAAGASAFRVVRDHVTSVFRHDDLASALAATDLDED 118 Query 121 DL 122 DL Sbjct 119 DL 120 >gi|226306470|ref|YP_002766430.1| hypothetical protein RER_29830 [Rhodococcus erythropolis PR4] gi|226185587|dbj|BAH33691.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=126 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 77/123 (63%), Positives = 94/123 (77%), Gaps = 0/123 (0%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 M+TSEIATVLAWHDALN+ DI+TL+ LS+DDI++G GA QG ALR WA++ T Sbjct 1 MSTSEIATVLAWHDALNSQDIDTLLQLSSDDIEVGGPKGASQGLAALREWATNAGITLVP 60 Query 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 G+MYVHHGVVVVEQ T +P + T A+AFRVV D V S FRH DLA+ALAAT+L+E+ Sbjct 61 GKMYVHHGVVVVEQTATWAAEPDKSATLASAFRVVADQVTSTFRHPDLATALAATDLSEN 120 Query 121 DLV 123 DLV Sbjct 121 DLV 123 >gi|229493636|ref|ZP_04387421.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229319597|gb|EEN85433.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=126 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 76/123 (62%), Positives = 94/123 (77%), Gaps = 0/123 (0%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 M+TSEIATVLAWHDALN+ D++TL+ LS+DDI++G GA QG ALR WA++ T Sbjct 1 MSTSEIATVLAWHDALNSQDVDTLLQLSSDDIEVGGPKGASQGLAALREWATNAGITLVP 60 Query 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 G+MYVHHGVVVVEQ T +P + T A+AFRVV D V S FRH DLA+ALAAT+L+E+ Sbjct 61 GKMYVHHGVVVVEQTATWAAEPDKSATLASAFRVVADQVTSTFRHPDLATALAATDLSEN 120 Query 121 DLV 123 DLV Sbjct 121 DLV 123 >gi|226364227|ref|YP_002782009.1| hypothetical protein ROP_48170 [Rhodococcus opacus B4] gi|226242716|dbj|BAH53064.1| hypothetical protein [Rhodococcus opacus B4] Length=126 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 76/123 (62%), Positives = 91/123 (74%), Gaps = 0/123 (0%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 M+TSEIATVLAWHDALN+ DI+TL++LS+DDI++G GA QG ALR WAS+ T Sbjct 1 MSTSEIATVLAWHDALNSGDIDTLLSLSSDDIEMGGPKGATQGLAALREWASTAGITLNP 60 Query 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 RMY + GV+VVEQ+ T DP RT A+AFRVV D V S FRHE L SAL+AT+LTE Sbjct 61 KRMYYYDGVLVVEQQATWSTDPAETRTLASAFRVVHDQVISTFRHETLESALSATDLTEK 120 Query 121 DLV 123 DLV Sbjct 121 DLV 123 >gi|254230698|ref|ZP_04924025.1| hypothetical protein TBCG_00328 [Mycobacterium tuberculosis C] gi|124599757|gb|EAY58767.1| hypothetical protein TBCG_00328 [Mycobacterium tuberculosis C] Length=128 Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 72/75 (96%), Positives = 72/75 (96%), Gaps = 0/75 (0%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL Sbjct 21 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 80 Query 61 GRMYVHHGVVVVEQK 75 GRMYVHHGVVV K Sbjct 81 GRMYVHHGVVVRRTK 95 >gi|111021691|ref|YP_704663.1| hypothetical protein RHA1_ro04719 [Rhodococcus jostii RHA1] gi|110821221|gb|ABG96505.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=125 Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 75/123 (61%), Positives = 90/123 (74%), Gaps = 1/123 (0%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 M+TSEIATVLAWHDALN+ DI+TL++LS+DDI++G GA QG ALR WAS+ T Sbjct 1 MSTSEIATVLAWHDALNSGDIDTLLSLSSDDIEMGGPKGATQGLAALREWASTAGITLIP 60 Query 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 RMY + GV+VVEQ+ T DP R A+AFRVV D V S FRHE L SAL+AT+LTE Sbjct 61 QRMYYYDGVLVVEQQATWA-DPEETRILASAFRVVHDQVISTFRHETLESALSATDLTEK 119 Query 121 DLV 123 DLV Sbjct 120 DLV 122 >gi|108797415|ref|YP_637612.1| hypothetical protein Mmcs_0435 [Mycobacterium sp. MCS] gi|119866499|ref|YP_936451.1| hypothetical protein Mkms_0445 [Mycobacterium sp. KMS] gi|126433034|ref|YP_001068725.1| hypothetical protein Mjls_0422 [Mycobacterium sp. JLS] gi|108767834|gb|ABG06556.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119692588|gb|ABL89661.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126232834|gb|ABN96234.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=122 Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 84/122 (69%), Positives = 96/122 (79%), Gaps = 2/122 (1%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 MTTSE ATVLAWHDALNA DI+TL+ LS+DDI+IGDAHGA QGH ALR WA +L AE Sbjct 1 MTTSEKATVLAWHDALNARDIDTLLELSSDDIEIGDAHGAAQGHAALRDWARALDVNAEP 60 Query 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 GR+Y+ GVVVVEQ+ITS G T A+AFRVV D V S+FRH DL+SALAATEL E+ Sbjct 61 GRLYIRDGVVVVEQQITSV--TGETGTAASAFRVVHDKVTSMFRHADLSSALAATELGEE 118 Query 121 DL 122 DL Sbjct 119 DL 120 >gi|312138232|ref|YP_004005568.1| hypothetical protein REQ_07670 [Rhodococcus equi 103S] gi|325674860|ref|ZP_08154547.1| hypothetical protein HMPREF0724_12329 [Rhodococcus equi ATCC 33707] gi|311887571|emb|CBH46883.1| conserved hypothetical protein [Rhodococcus equi 103S] gi|325554446|gb|EGD24121.1| hypothetical protein HMPREF0724_12329 [Rhodococcus equi ATCC 33707] Length=126 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 67/123 (55%), Positives = 91/123 (74%), Gaps = 0/123 (0%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 M SEIAT+LAWHDALN++DI+TL+A+S+DDI++ + GA QG ALR WA++ T Sbjct 1 MRISEIATILAWHDALNSSDIDTLLAVSSDDIELAGSEGAAQGLTALREWATTAAPTLVP 60 Query 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 GRM++H GVVVVE++ T +P + ++ A AFRVV D V +VFRH+ L AL AT+L+E Sbjct 61 GRMFMHDGVVVVEEQATWSSEPDVTKSVATAFRVVHDQVTAVFRHDTLEEALEATDLSEK 120 Query 121 DLV 123 DLV Sbjct 121 DLV 123 >gi|333988966|ref|YP_004521580.1| hypothetical protein JDM601_0326 [Mycobacterium sp. JDM601] gi|333484934|gb|AEF34326.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=119 Score = 133 bits (335), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 75/124 (61%), Positives = 88/124 (71%), Gaps = 5/124 (4%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 M+TSEIATVLAWHDAL A D+ETL LS+D I++ DA+GA QGH ALR WA+ TA + Sbjct 1 MSTSEIATVLAWHDALAAGDLETLEQLSSDGIEVADANGAAQGHQALRRWAAEAEITAGI 60 Query 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 GRMYVH GVVV E G A AFRVV+D VA+VFRH+ L +ALAAT+LTE Sbjct 61 GRMYVHDGVVVAELVPV-----GAGSAQAVAFRVVRDQVAAVFRHDGLDAALAATDLTEA 115 Query 121 DLVD 124 D VD Sbjct 116 DRVD 119 >gi|41409925|ref|NP_962761.1| hypothetical protein MAP3827 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398758|gb|AAS06377.1| hypothetical protein MAP_3827 [Mycobacterium avium subsp. paratuberculosis K-10] Length=116 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 55/75 (74%), Positives = 66/75 (88%), Gaps = 0/75 (0%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 MTTSEIATVLAWHDALNA+D++TL+ALS+DDI+IGDAHGA QGH+ALR WA++ TAEL Sbjct 1 MTTSEIATVLAWHDALNASDLDTLIALSSDDIEIGDAHGAAQGHEALRNWAAARRGTAEL 60 Query 61 GRMYVHHGVVVVEQK 75 GRMYVH GVV ++ Sbjct 61 GRMYVHDGVVSSNRR 75 >gi|120401618|ref|YP_951447.1| hypothetical protein Mvan_0602 [Mycobacterium vanbaalenii PYR-1] gi|119954436|gb|ABM11441.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=122 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 72/107 (68%), Positives = 82/107 (77%), Gaps = 2/107 (1%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 MTTSE+ATVLAWHDALNAAD++TL+ LS+DDI+IGDA GA QGH ALR WA +L E Sbjct 1 MTTSELATVLAWHDALNAADLDTLLELSSDDIEIGDAGGAAQGHAALRDWAQALDVKVEP 60 Query 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHED 107 GRMYVH GVVVVEQ+ S G + A+AFRVV DHV SVFRH D Sbjct 61 GRMYVHDGVVVVEQQTVSV--TGETGSEASAFRVVHDHVTSVFRHPD 105 >gi|145220890|ref|YP_001131568.1| hypothetical protein Mflv_0286 [Mycobacterium gilvum PYR-GCK] gi|315442154|ref|YP_004075033.1| hypothetical protein Mspyr1_04890 [Mycobacterium sp. Spyr1] gi|145213376|gb|ABP42780.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315260457|gb|ADT97198.1| hypothetical protein Mspyr1_04890 [Mycobacterium sp. Spyr1] Length=122 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 77/122 (64%), Positives = 94/122 (78%), Gaps = 2/122 (1%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 MTTSE+ATVLAWHDALNAAD++TL++LS++DI+IGDA GA QGH ALR WA +L E Sbjct 1 MTTSELATVLAWHDALNAADMDTLLSLSSEDIEIGDAGGAAQGHAALREWAQALDVRIEP 60 Query 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 GR+YV+ G+VV EQ+ S G + A+AFRVV DHV SVFRH+ LA+ALAAT L E Sbjct 61 GRVYVNDGIVVAEQQTVSV--TGETGSEASAFRVVHDHVTSVFRHDTLAAALAATGLGEA 118 Query 121 DL 122 DL Sbjct 119 DL 120 >gi|333918335|ref|YP_004491916.1| hypothetical protein AS9A_0662 [Amycolicicoccus subflavus DQS3-9A1] gi|333480556|gb|AEF39116.1| hypothetical protein AS9A_0662 [Amycolicicoccus subflavus DQS3-9A1] Length=126 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/124 (50%), Positives = 75/124 (61%), Gaps = 0/124 (0%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAEL 60 M+TSEIATVLAWH+ALN +I TL+ LS++DI+I A QG AL WA S+ T Sbjct 1 MSTSEIATVLAWHEALNTREIATLIQLSSEDIEIAAPDHASQGIAALCDWAESVDTGFVP 60 Query 61 GRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTED 120 GRMY GVVVVE+++ A+AFRVV D V S+FRH L A AT L Sbjct 61 GRMYYRGGVVVVEEELHHSASERDLDVQASAFRVVDDQVVSMFRHASLDEAFEATGLRAA 120 Query 121 DLVD 124 D VD Sbjct 121 DRVD 124 >gi|345013763|ref|YP_004816117.1| hypothetical protein Strvi_6390 [Streptomyces violaceusniger Tu 4113] gi|344040112|gb|AEM85837.1| hypothetical protein Strvi_6390 [Streptomyces violaceusniger Tu 4113] Length=119 Score = 41.6 bits (96), Expect = 0.045, Method: Compositional matrix adjust. Identities = 31/104 (30%), Positives = 46/104 (45%), Gaps = 8/104 (7%) Query 1 MTTSEIATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLT----T 56 MTT V + A+NA D++ +VA D + DA + G DA+R WA Sbjct 1 MTTPLPPVVAEYLAAVNAFDLDRMVATFAPDAYVNDARREINGVDAIRRWAEKEMVGDHV 60 Query 57 TAELGRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVA 100 T E+ + HHG +V + D +T A V+ DH + Sbjct 61 TMEVREVVDHHGDTIVRSRYDGTYD----KTNLPAELVMSDHFS 100 >gi|323488243|ref|ZP_08093493.1| hypothetical protein GPDM_02825 [Planococcus donghaensis MPA1U2] gi|323398101|gb|EGA90897.1| hypothetical protein GPDM_02825 [Planococcus donghaensis MPA1U2] Length=122 Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust. Identities = 31/119 (27%), Positives = 49/119 (42%), Gaps = 1/119 (0%) Query 6 IATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAELGRMYV 65 I W + +N +I ++ +S I++ G +GHD LR W E YV Sbjct 5 INIAKQWIENVNDKNINAVLEVSDPHIELVGPRGVAEGHDILRKWIEQSGIHMETQDYYV 64 Query 66 HHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVFRHEDLASALAATELTEDDLVD 124 V+ QK T G T ++ V + R++ L A L+E+DLV+ Sbjct 65 KGDEVICVQKATWENQSGHV-TIYTYMQMRNGKVHRLGRYDTLDDAFGQCHLSEEDLVE 122 >gi|294678922|ref|YP_003579537.1| chaperone ClpB [Rhodobacter capsulatus SB 1003] gi|294477742|gb|ADE87130.1| chaperone ClpB [Rhodobacter capsulatus SB 1003] Length=871 Score = 37.4 bits (85), Expect = 0.70, Method: Compositional matrix adjust. Identities = 33/116 (29%), Positives = 56/116 (49%), Gaps = 21/116 (18%) Query 13 HDALNAADIETLVALST--DDIDIG---DAHGAVQGHDALRGWASSLTTTAELGRM---- 63 DAL+A + T L+T +DI G D+ A QG+DAL+ +A LT AE G++ Sbjct 123 KDALDAGAV-TAQKLNTAINDIRKGRTADSANAEQGYDALKKYARDLTAAAEEGKIDPII 181 Query 64 ----YVHHGVVVVEQKITSGE----DPGIARTGAA---AFRVVQDHVASVFRHEDL 108 + + V+ ++ + +PG+ +T A A R++ V R++ L Sbjct 182 GRDDEIRRTMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIINGDVPESLRNKKL 237 >gi|123472364|ref|XP_001319376.1| ankyrin repeat protein [Trichomonas vaginalis G3] gi|121902158|gb|EAY07153.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3] Length=713 Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 44/90 (49%), Gaps = 9/90 (10%) Query 11 AWHDALNAADIETLVA-LSTDDIDIGDAHGAVQGHDALRGWASSLTTTAELGRMYVHHGV 69 A H A+ D+E+L L ++ IDI H +D GW+++LT ++ + + HG+ Sbjct 474 ALHHAIGQNDLESLEKDLESEKIDI---HSKDINYDTYVGWSTNLTDNMDIVELLISHGI 530 Query 70 VVVEQKITSGEDPGIARTGAAAFRVVQDHV 99 I S ++ G AAF V+D V Sbjct 531 -----DINSRDNDGDTALHLAAFLNVKDVV 555 >gi|120401265|ref|YP_951094.1| hypothetical protein Mvan_0239 [Mycobacterium vanbaalenii PYR-1] gi|119954083|gb|ABM11088.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=138 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/81 (31%), Positives = 43/81 (54%), Gaps = 6/81 (7%) Query 8 TVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWASSLTTTAELGRMYVHH 67 T+ W DA++A D++ ++A TDD+ + D HD +RG A + E ++ Sbjct 17 TIERWVDAISACDLDGVIAAHTDDVVLFDVPPP---HDGIRGIAGYRDSWPEFFE-FIRS 72 Query 68 GVV--VVEQKITSGEDPGIAR 86 G V ++E +T+G+D AR Sbjct 73 GAVLQLLELDVTAGDDVAFAR 93 >gi|167621787|ref|YP_001676572.1| hypothetical protein Caul_5138 [Caulobacter sp. K31] gi|167351528|gb|ABZ74258.1| conserved hypothetical protein [Caulobacter sp. K31] Length=169 Score = 35.4 bits (80), Expect = 3.2, Method: Compositional matrix adjust. Identities = 21/56 (38%), Positives = 30/56 (54%), Gaps = 1/56 (1%) Query 15 ALNAADIETLVALSTDDIDIGDAHGAVQGHDALRG-WASSLTTTAELGRMYVHHGV 69 A + DIE +VA T+D I GA++GHD LR +A T + R ++H V Sbjct 31 AFDEWDIEAMVAAFTEDCVIDHPRGAIRGHDQLRAFYADYFPLTPGVRRHSLNHVV 86 >gi|297563794|ref|YP_003682767.1| hypothetical protein Ndas_4878 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848243|gb|ADH70261.1| conserved hypothetical protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length=130 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 38/116 (33%), Positives = 51/116 (44%), Gaps = 9/116 (7%) Query 7 ATVLAWHDALNAADIETLVALSTDDIDIGDAHGAVQGHDALRGWAS-SLTTTAELGRMYV 65 A V WH A++A D+ A++ I +G G+ QG DA W S +G V Sbjct 11 APVRDWHAAVSARDLTAAKAVADPGIRVGGPQGSAQGVDAFLDWVRDSGIRIEPVGWHTV 70 Query 66 HHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVASVF--RHEDLASALAATELTE 119 VVVEQ PG A +G A V A++F RH + +AL E E Sbjct 71 DEHRVVVEQDAAW---PGRADSGPEAAPV---RTATLFEVRHGLITAALRYDEGVE 120 >gi|85860860|ref|YP_463062.1| antibiotic export ATP-binding protein [Syntrophus aciditrophicus SB] gi|85723951|gb|ABC78894.1| antibiotic export ATP-binding protein [Syntrophus aciditrophicus SB] Length=261 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 22/83 (27%), Positives = 39/83 (47%), Gaps = 7/83 (8%) Query 42 QGHDALRGWASSLTTTAELGRMYVHHGVVVVEQKITSGEDPGIARTGAAAFRVVQDHVAS 101 +GHD + ++ L E+ R +HH +++ + T G DP A R + D++A Sbjct 125 RGHDLVITFSGGLKRRLEIARSILHHPQILLLDEATVGLDP-------QARRRIWDYIAE 177 Query 102 VFRHEDLASALAATELTEDDLVD 124 + R +L L L E ++ D Sbjct 178 LRRDRELTVLLTTHYLEEAEICD 200 Lambda K H 0.316 0.129 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 130872486112 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40