BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0335c Length=171 Score E Sequences producing significant alignments: (Bits) Value gi|15839721|ref|NP_334758.1| PE family protein [Mycobacterium tu... 336 9e-91 gi|289572921|ref|ZP_06453148.1| PE family protein [Mycobacterium... 335 2e-90 gi|121636249|ref|YP_976472.1| PE family protein [Mycobacterium b... 332 1e-89 gi|340625366|ref|YP_004743818.1| PE family protein [Mycobacteriu... 317 5e-85 gi|308231524|ref|ZP_07412765.2| PE family protein [Mycobacterium... 296 7e-79 gi|289760444|ref|ZP_06519822.1| PE family protein [Mycobacterium... 276 1e-72 gi|323721053|gb|EGB30116.1| PE family protein [Mycobacterium tub... 261 2e-68 gi|289568245|ref|ZP_06448472.1| PE family protein [Mycobacterium... 247 5e-64 gi|289748818|ref|ZP_06508196.1| PE family protein [Mycobacterium... 224 3e-57 gi|289441715|ref|ZP_06431459.1| LOW QUALITY PROTEIN: PE family p... 224 4e-57 gi|254230700|ref|ZP_04924027.1| PE family protein [Mycobacterium... 218 3e-55 gi|167967772|ref|ZP_02550049.1| PE family protein [Mycobacterium... 198 2e-49 gi|289757153|ref|ZP_06516531.1| predicted protein [Mycobacterium... 73.6 1e-11 gi|118616101|ref|YP_904433.1| PE-PGRS family protein [Mycobacter... 67.0 8e-10 gi|240172746|ref|ZP_04751405.1| PE-PGRS family protein [Mycobact... 66.6 1e-09 gi|183984369|ref|YP_001852660.1| PE-PGRS family protein, PE_PGRS... 66.6 1e-09 gi|308369170|ref|ZP_07416818.2| hypothetical protein TMBG_02132 ... 59.7 1e-07 gi|240173089|ref|ZP_04751747.1| PE-PGRS family protein, PE_PGRS3... 57.8 6e-07 gi|31794772|ref|NP_857265.1| PE-PGRS family protein [Mycobacteri... 55.8 2e-06 gi|148663460|ref|YP_001284983.1| PE-PGRS family protein [Mycobac... 55.5 3e-06 gi|254234165|ref|ZP_04927489.1| PE-PGRS family protein [Mycobact... 55.5 3e-06 gi|297733265|ref|ZP_06962383.1| PE-PGRS family protein [Mycobact... 55.5 3e-06 gi|339633594|ref|YP_004725236.1| PE-PGRS family protein [Mycobac... 55.1 4e-06 gi|313660595|ref|ZP_07817475.1| PE-PGRS family protein [Mycobact... 55.1 4e-06 gi|294993715|ref|ZP_06799406.1| PE-PGRS family protein [Mycobact... 55.1 4e-06 gi|254552706|ref|ZP_05143153.1| PE-PGRS family protein [Mycobact... 55.1 4e-06 gi|15843208|ref|NP_338245.1| PE_PGRS family protein [Mycobacteri... 55.1 4e-06 gi|57117130|ref|YP_177994.1| PE-PGRS family protein [Mycobacteri... 55.1 4e-06 gi|297636271|ref|ZP_06954051.1| PE-PGRS family protein [Mycobact... 54.7 4e-06 gi|289573991|ref|ZP_06454218.1| predicted protein [Mycobacterium... 54.7 4e-06 gi|289572250|ref|ZP_06452477.1| PE-PGRS family protein [Mycobact... 54.7 4e-06 gi|306795977|ref|ZP_07434279.1| putative PE family protein [Myco... 54.7 4e-06 gi|306969728|ref|ZP_07482389.1| putative PE family protein [Myco... 54.7 5e-06 gi|306974069|ref|ZP_07486730.1| putative PE family protein [Myco... 54.7 5e-06 gi|323717704|gb|EGB26904.1| PE-PGRS family protein [Mycobacteriu... 54.7 5e-06 gi|306801223|ref|ZP_07437891.1| putative PE family protein [Myco... 54.7 5e-06 gi|306791192|ref|ZP_07429494.1| putative PE family protein [Myco... 54.7 5e-06 gi|306790869|ref|ZP_07429191.1| putative PE family protein [Myco... 54.7 5e-06 gi|306786503|ref|ZP_07424825.1| hypothetical protein TMCG_01093 ... 54.7 5e-06 gi|289747432|ref|ZP_06506810.1| PE-PGRS family protein [Mycobact... 54.7 5e-06 gi|307086393|ref|ZP_07495506.1| putative PE family protein [Myco... 54.7 5e-06 gi|307081777|ref|ZP_07490947.1| putative PE family protein [Myco... 54.7 5e-06 gi|306777951|ref|ZP_07416288.1| hypothetical protein TMAG_00085 ... 54.3 6e-06 gi|240171920|ref|ZP_04750579.1| PE-PGRS family protein, PE_PGRS3... 53.9 8e-06 gi|308379876|ref|ZP_07487960.2| PE-PGRS family protein [Mycobact... 53.9 8e-06 gi|308374109|ref|ZP_07434904.2| PE-PGRS family protein [Mycobact... 53.9 8e-06 gi|289568786|ref|ZP_06449013.1| LOW QUALITY PROTEIN: PE-PGRS fam... 53.9 9e-06 gi|308370146|ref|ZP_07420469.2| PE-PGRS family protein [Mycobact... 53.9 9e-06 gi|289749348|ref|ZP_06508726.1| PE-PGRS family protein [Mycobact... 53.9 9e-06 gi|307083351|ref|ZP_07492464.1| PE-PGRS family protein [Mycobact... 53.5 1e-05 >gi|15839721|ref|NP_334758.1| PE family protein [Mycobacterium tuberculosis CDC1551] gi|31791513|ref|NP_854006.1| PE family protein [Mycobacterium bovis AF2122/97] gi|57116722|ref|YP_177717.1| PE family protein [Mycobacterium tuberculosis H37Rv] 27 more sequence titles Length=171 Score = 336 bits (861), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 170/171 (99%), Positives = 171/171 (100%), Gaps = 0/171 (0%) Query 1 VRSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRI 60 +RSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRI Sbjct 1 MRSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRI 60 Query 61 SNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSC 120 SNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSC Sbjct 61 SNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSC 120 Query 121 ASAETTADAPTQALLGPADRQRRQRRAVRQWLVRWAAHPGRATRGFHNHRQ 171 ASAETTADAPTQALLGPADRQRRQRRAVRQWLVRWAAHPGRATRGFHNHRQ Sbjct 121 ASAETTADAPTQALLGPADRQRRQRRAVRQWLVRWAAHPGRATRGFHNHRQ 171 >gi|289572921|ref|ZP_06453148.1| PE family protein [Mycobacterium tuberculosis K85] gi|339630408|ref|YP_004722050.1| PE family protein [Mycobacterium africanum GM041182] gi|289537352|gb|EFD41930.1| PE family protein [Mycobacterium tuberculosis K85] gi|339329764|emb|CCC25409.1| PE family protein [Mycobacterium africanum GM041182] Length=171 Score = 335 bits (858), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 169/171 (99%), Positives = 170/171 (99%), Gaps = 0/171 (0%) Query 1 VRSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRI 60 +RSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRI Sbjct 1 MRSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRI 60 Query 61 SNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSC 120 SNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSC Sbjct 61 SNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSC 120 Query 121 ASAETTADAPTQALLGPADRQRRQRRAVRQWLVRWAAHPGRATRGFHNHRQ 171 ASAETTADAPTQALLGPADRQRRQRRAVRQWLVRWA HPGRATRGFHNHRQ Sbjct 121 ASAETTADAPTQALLGPADRQRRQRRAVRQWLVRWAVHPGRATRGFHNHRQ 171 >gi|121636249|ref|YP_976472.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988722|ref|YP_002643409.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121491896|emb|CAL70359.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224771835|dbj|BAH24641.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341600265|emb|CCC62935.1| PE family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=171 Score = 332 bits (852), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 169/171 (99%), Positives = 170/171 (99%), Gaps = 0/171 (0%) Query 1 VRSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRI 60 +RSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRI Sbjct 1 MRSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRI 60 Query 61 SNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSC 120 SNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSC Sbjct 61 SNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSC 120 Query 121 ASAETTADAPTQALLGPADRQRRQRRAVRQWLVRWAAHPGRATRGFHNHRQ 171 ASAETTADAP QALLGPADRQRRQRRAVRQWLVRWAAHPGRATRGFHNHRQ Sbjct 121 ASAETTADAPPQALLGPADRQRRQRRAVRQWLVRWAAHPGRATRGFHNHRQ 171 >gi|340625366|ref|YP_004743818.1| PE family protein [Mycobacterium canettii CIPT 140010059] gi|340003556|emb|CCC42677.1| PE family protein [Mycobacterium canettii CIPT 140010059] Length=172 Score = 317 bits (811), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 162/165 (99%), Positives = 163/165 (99%), Gaps = 0/165 (0%) Query 1 VRSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRI 60 +RSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCAT RPRPPQGNQPPASRI Sbjct 1 MRSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATARPRPPQGNQPPASRI 60 Query 61 SNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSC 120 SNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSC Sbjct 61 SNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSC 120 Query 121 ASAETTADAPTQALLGPADRQRRQRRAVRQWLVRWAAHPGRATRG 165 ASAETTADAPTQALLGPADRQRRQRRAVRQ LVRWAAHPGRATRG Sbjct 121 ASAETTADAPTQALLGPADRQRRQRRAVRQRLVRWAAHPGRATRG 165 >gi|308231524|ref|ZP_07412765.2| PE family protein [Mycobacterium tuberculosis SUMu001] gi|308369366|ref|ZP_07417511.2| PE family protein [Mycobacterium tuberculosis SUMu002] gi|308370376|ref|ZP_07421283.2| PE family protein [Mycobacterium tuberculosis SUMu003] 17 more sequence titles Length=150 Score = 296 bits (758), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 150/150 (100%), Positives = 150/150 (100%), Gaps = 0/150 (0%) Query 22 MARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRISNFPPKRHKTRVLAAAEDEVS 81 MARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRISNFPPKRHKTRVLAAAEDEVS Sbjct 1 MARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRISNFPPKRHKTRVLAAAEDEVS 60 Query 82 AAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPTQALLGPADRQ 141 AAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPTQALLGPADRQ Sbjct 61 AAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPTQALLGPADRQ 120 Query 142 RRQRRAVRQWLVRWAAHPGRATRGFHNHRQ 171 RRQRRAVRQWLVRWAAHPGRATRGFHNHRQ Sbjct 121 RRQRRAVRQWLVRWAAHPGRATRGFHNHRQ 150 >gi|289760444|ref|ZP_06519822.1| PE family protein [Mycobacterium tuberculosis GM 1503] gi|289707950|gb|EFD71966.1| PE family protein [Mycobacterium tuberculosis GM 1503] Length=142 Score = 276 bits (705), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 139/139 (100%), Positives = 139/139 (100%), Gaps = 0/139 (0%) Query 33 PAATPPGPLCATTRPRPPQGNQPPASRISNFPPKRHKTRVLAAAEDEVSAAVAALISAHG 92 PAATPPGPLCATTRPRPPQGNQPPASRISNFPPKRHKTRVLAAAEDEVSAAVAALISAHG Sbjct 4 PAATPPGPLCATTRPRPPQGNQPPASRISNFPPKRHKTRVLAAAEDEVSAAVAALISAHG 63 Query 93 RRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPTQALLGPADRQRRQRRAVRQWL 152 RRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPTQALLGPADRQRRQRRAVRQWL Sbjct 64 RRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPTQALLGPADRQRRQRRAVRQWL 123 Query 153 VRWAAHPGRATRGFHNHRQ 171 VRWAAHPGRATRGFHNHRQ Sbjct 124 VRWAAHPGRATRGFHNHRQ 142 >gi|323721053|gb|EGB30116.1| PE family protein [Mycobacterium tuberculosis CDC1551A] Length=134 Score = 261 bits (668), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 133/134 (99%), Positives = 134/134 (100%), Gaps = 0/134 (0%) Query 1 VRSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRI 60 +RSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRI Sbjct 1 MRSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRI 60 Query 61 SNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSC 120 SNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSC Sbjct 61 SNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSC 120 Query 121 ASAETTADAPTQAL 134 ASAETTADAPTQAL Sbjct 121 ASAETTADAPTQAL 134 >gi|289568245|ref|ZP_06448472.1| PE family protein [Mycobacterium tuberculosis T17] gi|289541998|gb|EFD45647.1| PE family protein [Mycobacterium tuberculosis T17] Length=130 Score = 247 bits (630), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 124/124 (100%), Positives = 124/124 (100%), Gaps = 0/124 (0%) Query 48 RPPQGNQPPASRISNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHG 107 RPPQGNQPPASRISNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHG Sbjct 7 RPPQGNQPPASRISNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHG 66 Query 108 QFAQNLNVGAGSCASAETTADAPTQALLGPADRQRRQRRAVRQWLVRWAAHPGRATRGFH 167 QFAQNLNVGAGSCASAETTADAPTQALLGPADRQRRQRRAVRQWLVRWAAHPGRATRGFH Sbjct 67 QFAQNLNVGAGSCASAETTADAPTQALLGPADRQRRQRRAVRQWLVRWAAHPGRATRGFH 126 Query 168 NHRQ 171 NHRQ Sbjct 127 NHRQ 130 >gi|289748818|ref|ZP_06508196.1| PE family protein [Mycobacterium tuberculosis T92] gi|289689405|gb|EFD56834.1| PE family protein [Mycobacterium tuberculosis T92] Length=161 Score = 224 bits (571), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 127/135 (95%), Positives = 127/135 (95%), Gaps = 0/135 (0%) Query 37 PPGPLCATTRPRPPQGNQPPASRISNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHH 96 P GP RPPQGNQPPASRISNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHH Sbjct 27 PTGPTVRHHPARPPQGNQPPASRISNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHH 86 Query 97 SLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPTQALLGPADRQRRQRRAVRQWLVRWA 156 SLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPTQALLGPADRQRRQRRAVRQWLVRWA Sbjct 87 SLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPTQALLGPADRQRRQRRAVRQWLVRWA 146 Query 157 AHPGRATRGFHNHRQ 171 AHPGRATRGFHNHRQ Sbjct 147 AHPGRATRGFHNHRQ 161 >gi|289441715|ref|ZP_06431459.1| LOW QUALITY PROTEIN: PE family protein [Mycobacterium tuberculosis T46] gi|289414634|gb|EFD11874.1| LOW QUALITY PROTEIN: PE family protein [Mycobacterium tuberculosis T46] Length=170 Score = 224 bits (571), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 127/135 (95%), Positives = 127/135 (95%), Gaps = 0/135 (0%) Query 37 PPGPLCATTRPRPPQGNQPPASRISNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHH 96 P GP RPPQGNQPPASRISNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHH Sbjct 36 PTGPTVRHHPARPPQGNQPPASRISNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHH 95 Query 97 SLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPTQALLGPADRQRRQRRAVRQWLVRWA 156 SLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPTQALLGPADRQRRQRRAVRQWLVRWA Sbjct 96 SLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPTQALLGPADRQRRQRRAVRQWLVRWA 155 Query 157 AHPGRATRGFHNHRQ 171 AHPGRATRGFHNHRQ Sbjct 156 AHPGRATRGFHNHRQ 170 >gi|254230700|ref|ZP_04924027.1| PE family protein [Mycobacterium tuberculosis C] gi|124599759|gb|EAY58769.1| PE family protein [Mycobacterium tuberculosis C] Length=121 Score = 218 bits (554), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 112/121 (93%), Positives = 113/121 (94%), Gaps = 0/121 (0%) Query 1 VRSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRI 60 +RSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRI Sbjct 1 MRSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRI 60 Query 61 SNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSC 120 SNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHG GAGSC Sbjct 61 SNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGPVCTEPERGAGSC 120 Query 121 A 121 A Sbjct 121 A 121 >gi|167967772|ref|ZP_02550049.1| PE family protein [Mycobacterium tuberculosis H37Ra] gi|254549277|ref|ZP_05139724.1| PE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289752365|ref|ZP_06511743.1| PE family protein [Mycobacterium tuberculosis EAS054] 9 more sequence titles Length=100 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 99/100 (99%), Positives = 100/100 (100%), Gaps = 0/100 (0%) Query 72 VLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPT 131 +LAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPT Sbjct 1 MLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPT 60 Query 132 QALLGPADRQRRQRRAVRQWLVRWAAHPGRATRGFHNHRQ 171 QALLGPADRQRRQRRAVRQWLVRWAAHPGRATRGFHNHRQ Sbjct 61 QALLGPADRQRRQRRAVRQWLVRWAAHPGRATRGFHNHRQ 100 >gi|289757153|ref|ZP_06516531.1| predicted protein [Mycobacterium tuberculosis T85] gi|289712717|gb|EFD76729.1| predicted protein [Mycobacterium tuberculosis T85] Length=252 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/115 (47%), Positives = 64/115 (56%), Gaps = 19/115 (16%) Query 72 VLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETT----- 126 +L AA DEVSA +AAL S HG + ++ Q AAFH QF L AG+ ASAE T Sbjct 45 LLPAAADEVSAHIAALFSGHGEGYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQ 104 Query 127 ----ADAPTQALLG-PADRQRR-----QRRAVRQWLVRWAAHPGRATRGFHNHRQ 171 +APTQALLG P RQRR Q + R+W+V W R R F NHR+ Sbjct 105 VLGLINAPTQALLGRPLYRQRRRWDRGQSQRWRRWVVVWQ----RRQRVFPNHRR 155 >gi|118616101|ref|YP_904433.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99] gi|118568211|gb|ABL02962.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99] Length=636 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 41/73 (57%), Positives = 48/73 (66%), Gaps = 0/73 (0%) Query 67 RHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETT 126 R T VLAA DEVSAA+AAL S HG+ + +L QA AFH QFAQ + GAG+ ASAE Sbjct 34 RATTTVLAAGGDEVSAAIAALFSFHGQSYQTLGAQAEAFHAQFAQLMANGAGTYASAEAA 93 Query 127 ADAPTQALLGPAD 139 AP Q LLG + Sbjct 94 NAAPFQGLLGAVN 106 >gi|240172746|ref|ZP_04751405.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478] Length=378 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/79 (52%), Positives = 50/79 (64%), Gaps = 11/79 (13%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCASAE---- 124 TR+LAAA+DEVSAA+AAL AH + + +++ QAAAFH QF + L GS A AE Sbjct 36 TTRLLAAAQDEVSAAIAALFGAHAQEYQAISAQAAAFHDQFVRALTASGGSYAMAEAANA 95 Query 125 ----TTAD---APTQALLG 136 T D APTQALLG Sbjct 96 SPFQTVLDAVNAPTQALLG 114 >gi|183984369|ref|YP_001852660.1| PE-PGRS family protein, PE_PGRS9_3 [Mycobacterium marinum M] gi|183177695|gb|ACC42805.1| PE-PGRS family protein, PE_PGRS9_3 [Mycobacterium marinum M] Length=910 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/70 (59%), Positives = 47/70 (68%), Gaps = 0/70 (0%) Query 67 RHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETT 126 R T VLAA DEVSAA+AAL S HG+ + +L QA AFH QFAQ + GAG+ ASAE Sbjct 34 RATTTVLAAGGDEVSAAIAALFSFHGQSYQTLGAQAEAFHAQFAQLMANGAGTYASAEAA 93 Query 127 ADAPTQALLG 136 AP Q LLG Sbjct 94 NAAPFQGLLG 103 >gi|308369170|ref|ZP_07416818.2| hypothetical protein TMBG_02132 [Mycobacterium tuberculosis SUMu002] gi|308328477|gb|EFP17328.1| hypothetical protein TMBG_02132 [Mycobacterium tuberculosis SUMu002] Length=154 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/104 (43%), Positives = 56/104 (54%), Gaps = 21/104 (20%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 50 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 109 Query 122 --SAETTADAPTQALLG------------PADRQRRQRRAVRQW 151 S +APTQALLG P ++R R AV QW Sbjct 110 QQSLLNAINAPTQALLGRPLIGDGADGTAPGQKRRGGRAAVWQW 153 >gi|240173089|ref|ZP_04751747.1| PE-PGRS family protein, PE_PGRS34_1 [Mycobacterium kansasii ATCC 12478] Length=212 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 28/42 (67%), Positives = 33/42 (79%), Gaps = 0/42 (0%) Query 78 DEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGS 119 DEVSAA+A L SAHG+ + +L+ QAAAFH QF Q LNV AGS Sbjct 45 DEVSAAIATLFSAHGQAYQALSAQAAAFHNQFVQALNVNAGS 86 >gi|31794772|ref|NP_857265.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|121639515|ref|YP_979739.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224992012|ref|YP_002646701.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31620369|emb|CAD95812.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] gi|121495163|emb|CAL73649.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224775127|dbj|BAH27933.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341603536|emb|CCC66217.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=492 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|148663460|ref|YP_001284983.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148507612|gb|ABQ75421.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=238 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|254234165|ref|ZP_04927489.1| PE-PGRS family protein [Mycobacterium tuberculosis C] gi|124603833|gb|EAY61796.1| PE-PGRS family protein [Mycobacterium tuberculosis C] Length=327 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|297733265|ref|ZP_06962383.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506] Length=330 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|339633594|ref|YP_004725236.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|340628560|ref|YP_004747012.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|339332950|emb|CCC28677.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|340006750|emb|CCC45938.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=448 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|313660595|ref|ZP_07817475.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN V2475] Length=439 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|294993715|ref|ZP_06799406.1| PE-PGRS family protein [Mycobacterium tuberculosis 210] Length=439 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|254552706|ref|ZP_05143153.1| PE-PGRS family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=348 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|15843208|ref|NP_338245.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13883562|gb|AAK48059.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=436 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|57117130|ref|YP_177994.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148824801|ref|YP_001289555.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|167968196|ref|ZP_02550473.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] 12 more sequence titles Length=439 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|297636271|ref|ZP_06954051.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] Length=439 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|289573991|ref|ZP_06454218.1| predicted protein [Mycobacterium tuberculosis K85] gi|289538422|gb|EFD43000.1| predicted protein [Mycobacterium tuberculosis K85] Length=261 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 34/67 (51%), Positives = 46/67 (69%), Gaps = 0/67 (0%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETTAD 128 T +LAA DEVSAA+A+L +AHG+ + +++ Q +AFH QF Q GAG+ ASAE A Sbjct 36 TTELLAAGADEVSAAIASLFAAHGQAYQAVSAQMSAFHAQFVQTFTTGAGAYASAEAAAA 95 Query 129 APTQALL 135 AP + LL Sbjct 96 APLEGLL 102 >gi|289572250|ref|ZP_06452477.1| PE-PGRS family protein [Mycobacterium tuberculosis K85] gi|289536681|gb|EFD41259.1| PE-PGRS family protein [Mycobacterium tuberculosis K85] Length=249 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|306795977|ref|ZP_07434279.1| putative PE family protein [Mycobacterium tuberculosis SUMu006] gi|308343543|gb|EFP32394.1| putative PE family protein [Mycobacterium tuberculosis SUMu006] Length=199 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|306969728|ref|ZP_07482389.1| putative PE family protein [Mycobacterium tuberculosis SUMu009] gi|308352737|gb|EFP41588.1| putative PE family protein [Mycobacterium tuberculosis SUMu009] Length=152 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|306974069|ref|ZP_07486730.1| putative PE family protein [Mycobacterium tuberculosis SUMu010] gi|308356586|gb|EFP45437.1| putative PE family protein [Mycobacterium tuberculosis SUMu010] Length=159 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|323717704|gb|EGB26904.1| PE-PGRS family protein [Mycobacterium tuberculosis CDC1551A] Length=158 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|306801223|ref|ZP_07437891.1| putative PE family protein [Mycobacterium tuberculosis SUMu008] gi|306805437|ref|ZP_07442105.1| putative PE family protein [Mycobacterium tuberculosis SUMu007] gi|308348010|gb|EFP36861.1| putative PE family protein [Mycobacterium tuberculosis SUMu007] gi|308351951|gb|EFP40802.1| putative PE family protein [Mycobacterium tuberculosis SUMu008] Length=172 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|306791192|ref|ZP_07429494.1| putative PE family protein [Mycobacterium tuberculosis SUMu005] gi|308340221|gb|EFP29072.1| putative PE family protein [Mycobacterium tuberculosis SUMu005] Length=180 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|306790869|ref|ZP_07429191.1| putative PE family protein [Mycobacterium tuberculosis SUMu004] gi|308332728|gb|EFP21579.1| putative PE family protein [Mycobacterium tuberculosis SUMu004] Length=182 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|306786503|ref|ZP_07424825.1| hypothetical protein TMCG_01093 [Mycobacterium tuberculosis SUMu003] gi|308328890|gb|EFP17741.1| hypothetical protein TMCG_01093 [Mycobacterium tuberculosis SUMu003] Length=171 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|289747432|ref|ZP_06506810.1| PE-PGRS family protein [Mycobacterium tuberculosis 02_1987] gi|289687960|gb|EFD55448.1| PE-PGRS family protein [Mycobacterium tuberculosis 02_1987] Length=160 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|307086393|ref|ZP_07495506.1| putative PE family protein [Mycobacterium tuberculosis SUMu012] gi|308364159|gb|EFP53010.1| putative PE family protein [Mycobacterium tuberculosis SUMu012] Length=140 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|307081777|ref|ZP_07490947.1| putative PE family protein [Mycobacterium tuberculosis SUMu011] gi|308360543|gb|EFP49394.1| putative PE family protein [Mycobacterium tuberculosis SUMu011] Length=156 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|306777951|ref|ZP_07416288.1| hypothetical protein TMAG_00085 [Mycobacterium tuberculosis SUMu001] gi|308213723|gb|EFO73122.1| hypothetical protein TMAG_00085 [Mycobacterium tuberculosis SUMu001] Length=165 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 9/77 (11%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCA------- 121 T VLAA D+VSAA+AAL AH + + +++ QAA FH QF Q L+ GAG+ A Sbjct 36 TTGVLAAGADDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANV 95 Query 122 --SAETTADAPTQALLG 136 S +APTQALLG Sbjct 96 QQSLLNAINAPTQALLG 112 >gi|240171920|ref|ZP_04750579.1| PE-PGRS family protein, PE_PGRS34_1 [Mycobacterium kansasii ATCC 12478] Length=164 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 36/67 (54%), Positives = 46/67 (69%), Gaps = 0/67 (0%) Query 69 KTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETTAD 128 T VLAA DEVSAA+AAL + H + + SL+ QAA+FH QF Q +N GAG+ A+AE Sbjct 36 TTSVLAAGADEVSAAIAALFNTHAQAYQSLSAQAASFHAQFIQTMNAGAGAYAAAEAANA 95 Query 129 APTQALL 135 +P QAL Sbjct 96 SPIQALF 102 >gi|308379876|ref|ZP_07487960.2| PE-PGRS family protein [Mycobacterium tuberculosis SUMu011] gi|308363312|gb|EFP52163.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu011] Length=129 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 28/52 (54%), Positives = 36/52 (70%), Gaps = 0/52 (0%) Query 84 VAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPTQALL 135 +AAL SAHGR +L+ +AAAFH +F Q L GAGS A AE A +P Q+L+ Sbjct 64 IAALFSAHGRDFQALSARAAAFHHEFVQALAAGAGSYAVAEIAAASPLQSLI 115 >gi|308374109|ref|ZP_07434904.2| PE-PGRS family protein [Mycobacterium tuberculosis SUMu006] gi|308342976|gb|EFP31827.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu006] Length=102 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 28/52 (54%), Positives = 36/52 (70%), Gaps = 0/52 (0%) Query 84 VAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPTQALL 135 +AAL SAHGR +L+ +AAAFH +F Q L GAGS A AE A +P Q+L+ Sbjct 51 IAALFSAHGRDFQALSARAAAFHHEFVQALAAGAGSYAVAEIAAASPLQSLI 102 >gi|289568786|ref|ZP_06449013.1| LOW QUALITY PROTEIN: PE-PGRS family protein [Mycobacterium tuberculosis T17] gi|289542540|gb|EFD46188.1| LOW QUALITY PROTEIN: PE-PGRS family protein [Mycobacterium tuberculosis T17] Length=117 Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 28/52 (54%), Positives = 36/52 (70%), Gaps = 0/52 (0%) Query 84 VAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPTQALL 135 +AAL SAHGR +L+ +AAAFH +F Q L GAGS A AE A +P Q+L+ Sbjct 51 IAALFSAHGRDFQALSARAAAFHHEFVQALAAGAGSYAVAEIAAASPLQSLI 102 >gi|308370146|ref|ZP_07420469.2| PE-PGRS family protein [Mycobacterium tuberculosis SUMu002] gi|308325172|gb|EFP14023.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu002] Length=104 Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 28/52 (54%), Positives = 36/52 (70%), Gaps = 0/52 (0%) Query 84 VAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPTQALL 135 +AAL SAHGR +L+ +AAAFH +F Q L GAGS A AE A +P Q+L+ Sbjct 51 IAALFSAHGRDFQALSARAAAFHHEFVQALAAGAGSYAVAEIAAASPLQSLI 102 >gi|289749348|ref|ZP_06508726.1| PE-PGRS family protein [Mycobacterium tuberculosis T92] gi|289689935|gb|EFD57364.1| PE-PGRS family protein [Mycobacterium tuberculosis T92] Length=131 Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 28/52 (54%), Positives = 36/52 (70%), Gaps = 0/52 (0%) Query 84 VAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPTQALL 135 +AAL SAHGR +L+ +AAAFH +F Q L GAGS A AE A +P Q+L+ Sbjct 64 IAALFSAHGRDFQALSARAAAFHHEFVQALAAGAGSYAVAEIAAASPLQSLI 115 >gi|307083351|ref|ZP_07492464.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu012] gi|308366963|gb|EFP55814.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu012] Length=122 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/52 (54%), Positives = 36/52 (70%), Gaps = 0/52 (0%) Query 84 VAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPTQALL 135 +AAL SAHGR +L+ +AAAFH +F Q L GAGS A AE A +P Q+L+ Sbjct 51 IAALFSAHGRDFQALSARAAAFHHEFVQALAAGAGSYAVAEIAAASPLQSLI 102 Lambda K H 0.320 0.129 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 136720389372 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40