BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0341
Length=479
Score E
Sequences producing significant alignments: (Bits) Value
gi|167967427|ref|ZP_02549704.1| hypothetical protein MtubH3_0506... 868 0.0
gi|15607482|ref|NP_214855.1| isoniazid inductible gene protein I... 868 0.0
gi|15839727|ref|NP_334764.1| hypothetical protein MT0356 [Mycoba... 864 0.0
gi|306782968|ref|ZP_07421290.1| isoniazid inducible gene protein... 787 0.0
gi|289748824|ref|ZP_06508202.1| isoniazid inducible gene protein... 595 5e-168
gi|308376367|ref|ZP_07438603.2| isoniazid inducible gene protein... 370 3e-100
gi|289445880|ref|ZP_06435624.1| isoniazid inducible protein iniB... 370 3e-100
gi|298523818|ref|ZP_07011227.1| isoniazid inducible gene protein... 307 3e-81
gi|183980640|ref|YP_001848931.1| membrane protein, IniB [Mycobac... 164 5e-38
gi|118616399|ref|YP_904731.1| membrane protein, IniB [Mycobacter... 160 4e-37
gi|240171624|ref|ZP_04750283.1| membrane protein, IniB [Mycobact... 48.1 0.003
gi|226304833|ref|YP_002764791.1| hypothetical protein RER_13440 ... 43.1 0.098
gi|229492004|ref|ZP_04385820.1| conserved hypothetical protein [... 42.7 0.13
gi|111022452|ref|YP_705424.1| hypothetical protein RHA1_ro05486 ... 39.3 1.7
>gi|167967427|ref|ZP_02549704.1| hypothetical protein MtubH3_05067 [Mycobacterium tuberculosis
H37Ra]
gi|253797267|ref|YP_003030268.1| isoniazid inductible protein iniB [Mycobacterium tuberculosis
KZN 1435]
gi|254230704|ref|ZP_04924031.1| isoniazid inductible gene protein iniB [Mycobacterium tuberculosis
C]
34 more sequence titles
Length=481
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/479 (100%), Positives = 479/479 (100%), Gaps = 0/479 (0%)
Query 1 MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP 60
MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP
Sbjct 3 MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP 62
Query 61 MSGLRQAVAARHGFAQDVANVGFAGDAGAGVASVITTDVGAGLASGLGAGFLGQGGLALA 120
MSGLRQAVAARHGFAQDVANVGFAGDAGAGVASVITTDVGAGLASGLGAGFLGQGGLALA
Sbjct 63 MSGLRQAVAARHGFAQDVANVGFAGDAGAGVASVITTDVGAGLASGLGAGFLGQGGLALA 122
Query 121 ASSGGFGGQVGLAAQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGG 180
ASSGGFGGQVGLAAQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGG
Sbjct 123 ASSGGFGGQVGLAAQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGG 182
Query 181 QAGGVIGGSAAGAIGAGVGGRLGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGG 240
QAGGVIGGSAAGAIGAGVGGRLGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGG
Sbjct 183 QAGGVIGGSAAGAIGAGVGGRLGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGG 242
Query 241 GLGGVGNVSGLTGVSSNAVLASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAG 300
GLGGVGNVSGLTGVSSNAVLASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAG
Sbjct 243 GLGGVGNVSGLTGVSSNAVLASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAG 302
Query 301 AAGGAGLGFGAVGHPTPQPAALGAAGVVAKTEAAAGVVGGVGGATAAGVGGAHGDILGHE 360
AAGGAGLGFGAVGHPTPQPAALGAAGVVAKTEAAAGVVGGVGGATAAGVGGAHGDILGHE
Sbjct 303 AAGGAGLGFGAVGHPTPQPAALGAAGVVAKTEAAAGVVGGVGGATAAGVGGAHGDILGHE 362
Query 361 GAALGSVDTVNAGVTPVEHGLVLPSGPLIHGGTGGYGGMNPPVTDAPAPQVPARAQPMTT 420
GAALGSVDTVNAGVTPVEHGLVLPSGPLIHGGTGGYGGMNPPVTDAPAPQVPARAQPMTT
Sbjct 363 GAALGSVDTVNAGVTPVEHGLVLPSGPLIHGGTGGYGGMNPPVTDAPAPQVPARAQPMTT 422
Query 421 AAEHTPAVTQPQHTPVEPPVHDKPPSHSVFDVGHEPPVTHTPPAPIELPSYGLFGLPGF 479
AAEHTPAVTQPQHTPVEPPVHDKPPSHSVFDVGHEPPVTHTPPAPIELPSYGLFGLPGF
Sbjct 423 AAEHTPAVTQPQHTPVEPPVHDKPPSHSVFDVGHEPPVTHTPPAPIELPSYGLFGLPGF 481
>gi|15607482|ref|NP_214855.1| isoniazid inductible gene protein INIB [Mycobacterium tuberculosis
H37Rv]
gi|31791519|ref|NP_854012.1| isoniazid inductible gene protein INIB [Mycobacterium bovis AF2122/97]
gi|121636255|ref|YP_976478.1| isoniazid inductible gene protein iniB [Mycobacterium bovis BCG
str. Pasteur 1173P2]
32 more sequence titles
Length=479
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/479 (100%), Positives = 479/479 (100%), Gaps = 0/479 (0%)
Query 1 MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP 60
MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP
Sbjct 1 MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP 60
Query 61 MSGLRQAVAARHGFAQDVANVGFAGDAGAGVASVITTDVGAGLASGLGAGFLGQGGLALA 120
MSGLRQAVAARHGFAQDVANVGFAGDAGAGVASVITTDVGAGLASGLGAGFLGQGGLALA
Sbjct 61 MSGLRQAVAARHGFAQDVANVGFAGDAGAGVASVITTDVGAGLASGLGAGFLGQGGLALA 120
Query 121 ASSGGFGGQVGLAAQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGG 180
ASSGGFGGQVGLAAQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGG
Sbjct 121 ASSGGFGGQVGLAAQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGG 180
Query 181 QAGGVIGGSAAGAIGAGVGGRLGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGG 240
QAGGVIGGSAAGAIGAGVGGRLGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGG
Sbjct 181 QAGGVIGGSAAGAIGAGVGGRLGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGG 240
Query 241 GLGGVGNVSGLTGVSSNAVLASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAG 300
GLGGVGNVSGLTGVSSNAVLASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAG
Sbjct 241 GLGGVGNVSGLTGVSSNAVLASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAG 300
Query 301 AAGGAGLGFGAVGHPTPQPAALGAAGVVAKTEAAAGVVGGVGGATAAGVGGAHGDILGHE 360
AAGGAGLGFGAVGHPTPQPAALGAAGVVAKTEAAAGVVGGVGGATAAGVGGAHGDILGHE
Sbjct 301 AAGGAGLGFGAVGHPTPQPAALGAAGVVAKTEAAAGVVGGVGGATAAGVGGAHGDILGHE 360
Query 361 GAALGSVDTVNAGVTPVEHGLVLPSGPLIHGGTGGYGGMNPPVTDAPAPQVPARAQPMTT 420
GAALGSVDTVNAGVTPVEHGLVLPSGPLIHGGTGGYGGMNPPVTDAPAPQVPARAQPMTT
Sbjct 361 GAALGSVDTVNAGVTPVEHGLVLPSGPLIHGGTGGYGGMNPPVTDAPAPQVPARAQPMTT 420
Query 421 AAEHTPAVTQPQHTPVEPPVHDKPPSHSVFDVGHEPPVTHTPPAPIELPSYGLFGLPGF 479
AAEHTPAVTQPQHTPVEPPVHDKPPSHSVFDVGHEPPVTHTPPAPIELPSYGLFGLPGF
Sbjct 421 AAEHTPAVTQPQHTPVEPPVHDKPPSHSVFDVGHEPPVTHTPPAPIELPSYGLFGLPGF 479
>gi|15839727|ref|NP_334764.1| hypothetical protein MT0356 [Mycobacterium tuberculosis CDC1551]
gi|13879852|gb|AAK44578.1| hypothetical protein MT0356 [Mycobacterium tuberculosis CDC1551]
Length=481
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/479 (99%), Positives = 477/479 (99%), Gaps = 0/479 (0%)
Query 1 MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP 60
MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP
Sbjct 3 MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP 62
Query 61 MSGLRQAVAARHGFAQDVANVGFAGDAGAGVASVITTDVGAGLASGLGAGFLGQGGLALA 120
MSGLRQAVAARHGFAQDVANVGFAGDAGAGVASVITTDVGAGLASGLGAGFLGQGGLALA
Sbjct 63 MSGLRQAVAARHGFAQDVANVGFAGDAGAGVASVITTDVGAGLASGLGAGFLGQGGLALA 122
Query 121 ASSGGFGGQVGLAAQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGG 180
ASSGGFGGQVGLAAQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGG
Sbjct 123 ASSGGFGGQVGLAAQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGG 182
Query 181 QAGGVIGGSAAGAIGAGVGGRLGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGG 240
QAGGVIGGSAAGAIGAGVGGR+GGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGG
Sbjct 183 QAGGVIGGSAAGAIGAGVGGRVGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGG 242
Query 241 GLGGVGNVSGLTGVSSNAVLASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAG 300
GLGGVGNVSGLTGVSSNA ASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAG
Sbjct 243 GLGGVGNVSGLTGVSSNACXASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAG 302
Query 301 AAGGAGLGFGAVGHPTPQPAALGAAGVVAKTEAAAGVVGGVGGATAAGVGGAHGDILGHE 360
AAGGAGLGFGAVGHPTPQPAALGAAGVVAKTEAAAGVVGGVGGATAAGVGGAHGDILGHE
Sbjct 303 AAGGAGLGFGAVGHPTPQPAALGAAGVVAKTEAAAGVVGGVGGATAAGVGGAHGDILGHE 362
Query 361 GAALGSVDTVNAGVTPVEHGLVLPSGPLIHGGTGGYGGMNPPVTDAPAPQVPARAQPMTT 420
GAALGSVDTVNAGVTPVEHGLVLPSGPLIHGGTGGYGGMNPPVTDAPAPQVPARAQPMTT
Sbjct 363 GAALGSVDTVNAGVTPVEHGLVLPSGPLIHGGTGGYGGMNPPVTDAPAPQVPARAQPMTT 422
Query 421 AAEHTPAVTQPQHTPVEPPVHDKPPSHSVFDVGHEPPVTHTPPAPIELPSYGLFGLPGF 479
AAEHTPAVTQPQHTPVEPPVHDKPPSHSVFDVGHEPPVTHTPPAPIELPSYGLFGLPGF
Sbjct 423 AAEHTPAVTQPQHTPVEPPVHDKPPSHSVFDVGHEPPVTHTPPAPIELPSYGLFGLPGF 481
>gi|306782968|ref|ZP_07421290.1| isoniazid inducible gene protein iniB [Mycobacterium tuberculosis
SUMu003]
gi|308332186|gb|EFP21037.1| isoniazid inducible gene protein iniB [Mycobacterium tuberculosis
SUMu003]
Length=459
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/441 (100%), Positives = 441/441 (100%), Gaps = 0/441 (0%)
Query 1 MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP 60
MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP
Sbjct 3 MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP 62
Query 61 MSGLRQAVAARHGFAQDVANVGFAGDAGAGVASVITTDVGAGLASGLGAGFLGQGGLALA 120
MSGLRQAVAARHGFAQDVANVGFAGDAGAGVASVITTDVGAGLASGLGAGFLGQGGLALA
Sbjct 63 MSGLRQAVAARHGFAQDVANVGFAGDAGAGVASVITTDVGAGLASGLGAGFLGQGGLALA 122
Query 121 ASSGGFGGQVGLAAQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGG 180
ASSGGFGGQVGLAAQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGG
Sbjct 123 ASSGGFGGQVGLAAQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGG 182
Query 181 QAGGVIGGSAAGAIGAGVGGRLGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGG 240
QAGGVIGGSAAGAIGAGVGGRLGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGG
Sbjct 183 QAGGVIGGSAAGAIGAGVGGRLGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGG 242
Query 241 GLGGVGNVSGLTGVSSNAVLASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAG 300
GLGGVGNVSGLTGVSSNAVLASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAG
Sbjct 243 GLGGVGNVSGLTGVSSNAVLASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAG 302
Query 301 AAGGAGLGFGAVGHPTPQPAALGAAGVVAKTEAAAGVVGGVGGATAAGVGGAHGDILGHE 360
AAGGAGLGFGAVGHPTPQPAALGAAGVVAKTEAAAGVVGGVGGATAAGVGGAHGDILGHE
Sbjct 303 AAGGAGLGFGAVGHPTPQPAALGAAGVVAKTEAAAGVVGGVGGATAAGVGGAHGDILGHE 362
Query 361 GAALGSVDTVNAGVTPVEHGLVLPSGPLIHGGTGGYGGMNPPVTDAPAPQVPARAQPMTT 420
GAALGSVDTVNAGVTPVEHGLVLPSGPLIHGGTGGYGGMNPPVTDAPAPQVPARAQPMTT
Sbjct 363 GAALGSVDTVNAGVTPVEHGLVLPSGPLIHGGTGGYGGMNPPVTDAPAPQVPARAQPMTT 422
Query 421 AAEHTPAVTQPQHTPVEPPVH 441
AAEHTPAVTQPQHTPVEPPVH
Sbjct 423 AAEHTPAVTQPQHTPVEPPVH 443
>gi|289748824|ref|ZP_06508202.1| isoniazid inducible gene protein iniB [Mycobacterium tuberculosis
T92]
gi|289689411|gb|EFD56840.1| isoniazid inducible gene protein iniB [Mycobacterium tuberculosis
T92]
Length=479
Score = 595 bits (1534), Expect = 5e-168, Method: Compositional matrix adjust.
Identities = 467/479 (98%), Positives = 467/479 (98%), Gaps = 0/479 (0%)
Query 1 MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP 60
MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP
Sbjct 1 MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP 60
Query 61 MSGLRQAVAARHGFAQDVANVGFAGDAGAGVASVITTDVGAGLASGLGAGFLGQGGLALA 120
MSGLRQAVAARHGFAQDVANVGFAGDAGAGVASVITTDVGAGLASGLGAGFLGQGGLALA
Sbjct 61 MSGLRQAVAARHGFAQDVANVGFAGDAGAGVASVITTDVGAGLASGLGAGFLGQGGLALA 120
Query 121 ASSGGFGGQVGLAAQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGG 180
ASSGGFGGQVGLAAQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGG
Sbjct 121 ASSGGFGGQVGLAAQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGG 180
Query 181 QAGGVIGGSAAGAIGAGVGGRLGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGG 240
QAGGVIGGSAAGAIGAGVGGRLGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGG
Sbjct 181 QAGGVIGGSAAGAIGAGVGGRLGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGG 240
Query 241 GLGGVGNVSGLTGVSSNAVLASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAG 300
GLGGVGNVSGLTGVSSNAVLASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAG
Sbjct 241 GLGGVGNVSGLTGVSSNAVLASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAG 300
Query 301 AAGGAGLGFGAVGHPTPQPAALGAAGVVAKTEAAAGVVGGVGGATAAGVGGAHGDILGHE 360
AAGGAGLGFGAVGHPTPQPAALGAAGVVAK EAAAGVVGGVGGA G G GHE
Sbjct 301 AAGGAGLGFGAVGHPTPQPAALGAAGVVAKNEAAAGVVGGVGGAPRPGSAGHTATSWGHE 360
Query 361 GAALGSVDTVNAGVTPVEHGLVLPSGPLIHGGTGGYGGMNPPVTDAPAPQVPARAQPMTT 420
GAALGSVDTVNAGVTPVEHGLVLPSGPLIHGGTGGYGGMNPPVTDAPAPQVPARAQPMTT
Sbjct 361 GAALGSVDTVNAGVTPVEHGLVLPSGPLIHGGTGGYGGMNPPVTDAPAPQVPARAQPMTT 420
Query 421 AAEHTPAVTQPQHTPVEPPVHDKPPSHSVFDVGHEPPVTHTPPAPIELPSYGLFGLPGF 479
AAEHTPAVTQPQHTPVEPPVHDKPPSHSVFDVGHEPPVTHTPPAPIELPSYGLFGLPGF
Sbjct 421 AAEHTPAVTQPQHTPVEPPVHDKPPSHSVFDVGHEPPVTHTPPAPIELPSYGLFGLPGF 479
>gi|308376367|ref|ZP_07438603.2| isoniazid inducible gene protein iniB [Mycobacterium tuberculosis
SUMu008]
gi|308351286|gb|EFP40137.1| isoniazid inducible gene protein iniB [Mycobacterium tuberculosis
SUMu008]
Length=442
Score = 370 bits (950), Expect = 3e-100, Method: Compositional matrix adjust.
Identities = 335/335 (100%), Positives = 335/335 (100%), Gaps = 0/335 (0%)
Query 1 MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP 60
MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP
Sbjct 1 MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP 60
Query 61 MSGLRQAVAARHGFAQDVANVGFAGDAGAGVASVITTDVGAGLASGLGAGFLGQGGLALA 120
MSGLRQAVAARHGFAQDVANVGFAGDAGAGVASVITTDVGAGLASGLGAGFLGQGGLALA
Sbjct 61 MSGLRQAVAARHGFAQDVANVGFAGDAGAGVASVITTDVGAGLASGLGAGFLGQGGLALA 120
Query 121 ASSGGFGGQVGLAAQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGG 180
ASSGGFGGQVGLAAQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGG
Sbjct 121 ASSGGFGGQVGLAAQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGG 180
Query 181 QAGGVIGGSAAGAIGAGVGGRLGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGG 240
QAGGVIGGSAAGAIGAGVGGRLGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGG
Sbjct 181 QAGGVIGGSAAGAIGAGVGGRLGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGG 240
Query 241 GLGGVGNVSGLTGVSSNAVLASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAG 300
GLGGVGNVSGLTGVSSNAVLASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAG
Sbjct 241 GLGGVGNVSGLTGVSSNAVLASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAG 300
Query 301 AAGGAGLGFGAVGHPTPQPAALGAAGVVAKTEAAA 335
AAGGAGLGFGAVGHPTPQPAALGAAGVVAKTEAAA
Sbjct 301 AAGGAGLGFGAVGHPTPQPAALGAAGVVAKTEAAA 335
>gi|289445880|ref|ZP_06435624.1| isoniazid inducible protein iniB [Mycobacterium tuberculosis
CPHL_A]
gi|289418838|gb|EFD16039.1| isoniazid inducible protein iniB [Mycobacterium tuberculosis
CPHL_A]
Length=408
Score = 370 bits (950), Expect = 3e-100, Method: Compositional matrix adjust.
Identities = 346/346 (100%), Positives = 346/346 (100%), Gaps = 0/346 (0%)
Query 134 AQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGGQAGGVIGGSAAGA 193
AQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGGQAGGVIGGSAAGA
Sbjct 63 AQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGGQAGGVIGGSAAGA 122
Query 194 IGAGVGGRLGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGGGLGGVGNVSGLTG 253
IGAGVGGRLGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGGGLGGVGNVSGLTG
Sbjct 123 IGAGVGGRLGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGGGLGGVGNVSGLTG 182
Query 254 VSSNAVLASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAGAAGGAGLGFGAVG 313
VSSNAVLASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAGAAGGAGLGFGAVG
Sbjct 183 VSSNAVLASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAGAAGGAGLGFGAVG 242
Query 314 HPTPQPAALGAAGVVAKTEAAAGVVGGVGGATAAGVGGAHGDILGHEGAALGSVDTVNAG 373
HPTPQPAALGAAGVVAKTEAAAGVVGGVGGATAAGVGGAHGDILGHEGAALGSVDTVNAG
Sbjct 243 HPTPQPAALGAAGVVAKTEAAAGVVGGVGGATAAGVGGAHGDILGHEGAALGSVDTVNAG 302
Query 374 VTPVEHGLVLPSGPLIHGGTGGYGGMNPPVTDAPAPQVPARAQPMTTAAEHTPAVTQPQH 433
VTPVEHGLVLPSGPLIHGGTGGYGGMNPPVTDAPAPQVPARAQPMTTAAEHTPAVTQPQH
Sbjct 303 VTPVEHGLVLPSGPLIHGGTGGYGGMNPPVTDAPAPQVPARAQPMTTAAEHTPAVTQPQH 362
Query 434 TPVEPPVHDKPPSHSVFDVGHEPPVTHTPPAPIELPSYGLFGLPGF 479
TPVEPPVHDKPPSHSVFDVGHEPPVTHTPPAPIELPSYGLFGLPGF
Sbjct 363 TPVEPPVHDKPPSHSVFDVGHEPPVTHTPPAPIELPSYGLFGLPGF 408
>gi|298523818|ref|ZP_07011227.1| isoniazid inducible gene protein [Mycobacterium tuberculosis
94_M4241A]
gi|298493612|gb|EFI28906.1| isoniazid inducible gene protein [Mycobacterium tuberculosis
94_M4241A]
Length=275
Score = 307 bits (786), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 165/165 (100%), Positives = 165/165 (100%), Gaps = 0/165 (0%)
Query 1 MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP 60
MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP
Sbjct 3 MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP 62
Query 61 MSGLRQAVAARHGFAQDVANVGFAGDAGAGVASVITTDVGAGLASGLGAGFLGQGGLALA 120
MSGLRQAVAARHGFAQDVANVGFAGDAGAGVASVITTDVGAGLASGLGAGFLGQGGLALA
Sbjct 63 MSGLRQAVAARHGFAQDVANVGFAGDAGAGVASVITTDVGAGLASGLGAGFLGQGGLALA 122
Query 121 ASSGGFGGQVGLAAQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQ 165
ASSGGFGGQVGLAAQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQ
Sbjct 123 ASSGGFGGQVGLAAQVGLGFTAVIEAEVGAQVGAGLGIGTGLGAQ 167
>gi|183980640|ref|YP_001848931.1| membrane protein, IniB [Mycobacterium marinum M]
gi|183173966|gb|ACC39076.1| conserved hypothetical membrane protein, IniB [Mycobacterium
marinum M]
Length=999
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 112/225 (50%), Positives = 136/225 (61%), Gaps = 56/225 (24%)
Query 1 MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP 60
MTSL+DYILSLFRSEDAARSFVA+PG+AMT+AGL++++P +ISS AAN +P LNLGAGDP
Sbjct 3 MTSLVDYILSLFRSEDAARSFVASPGQAMTNAGLVNVSPVEISSAAANALPFLNLGAGDP 62
Query 61 MSGLRQAVAARHGFAQDVANVGFAGDA--------------------------------- 87
+ GL+QAVA ++G A + VG A
Sbjct 63 IGGLQQAVADQYGLA-PASEVGAASSYVAQDAGAVVAQDAAAVVSDAGVAAADAGFAGAD 121
Query 88 -GAGVASVITTDVGAGLA----SGLGAGFLGQG-------------GLALAASSGGFGGQ 129
GA VA+V+ D+GAGLA SGLGAG Q GLA ++G FGGQ
Sbjct 122 IGASVANVVAADIGAGLASGLTSGLGAGLWSQSGLGWQTGVGGVVPGLAYTQATGDFGGQ 181
Query 130 VGLAAQVGLGFTAVIEAEVGAQVGAGLGIG----TGLGAQAGMGF 170
VGLA+QVGLGF A I+A GAQ AGLG+G TGLGAQ G+G
Sbjct 182 VGLASQVGLGFGAGIQAGFGAQASAGLGLGFGAQTGLGAQTGLGI 226
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/153 (42%), Positives = 75/153 (50%), Gaps = 30/153 (19%)
Query 355 DILGHEGAALGSVDTVNAGVTPVEHGLVLPSG--------------------------PL 388
DILG EG LG V+ G+ PVEHG +P+G P+
Sbjct 849 DILGQEGTTLGGNGGVSGGIPPVEHGPTIPTGQGPVIQGGGGAGAGAGGQVSPPSGNGPV 908
Query 389 IHG--GTGGYGGMNPPVTDAPAPQVPARAQPMTTAAEHTPAVTQPQHTPVEPPVHDKPPS 446
I G+GG NPPV +APAP V T EH P VT H P E P H +PPS
Sbjct 909 IQSPGAGAGHGGANPPVINAPAPHVATPTPAHTPPVEHAPVVTPQPHVPAEQPAHHEPPS 968
Query 447 HSVFDVGHEPPVTHTPPAPIELPSYGLFGLPGF 479
SVF GHEPPVTHTPP ++ PS+G GF
Sbjct 969 PSVF--GHEPPVTHTPPVHVDPPSHGPVDPHGF 999
>gi|118616399|ref|YP_904731.1| membrane protein, IniB [Mycobacterium ulcerans Agy99]
gi|118568509|gb|ABL03260.1| conserved hypothetical membrane protein, IniB [Mycobacterium
ulcerans Agy99]
Length=955
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/225 (50%), Positives = 135/225 (60%), Gaps = 56/225 (24%)
Query 1 MTSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVAANVVPGLNLGAGDP 60
MTSL+DYILSLFRSEDAARSFVA+ G+AMT+AGL++++P +ISS AAN +P LNLGAGDP
Sbjct 1 MTSLVDYILSLFRSEDAARSFVASSGQAMTNAGLVNVSPVEISSAAANALPFLNLGAGDP 60
Query 61 MSGLRQAVAARHGFAQDVANVGFAGDA--------------------------------- 87
+ GL+QAVA ++G A + VG A
Sbjct 61 IGGLQQAVADQYGLA-PASEVGTASSYVAQDAGAVVAQDAAAVVSDAGVAAADAGFAGAD 119
Query 88 -GAGVASVITTDVGAGLA----SGLGAGFLGQG-------------GLALAASSGGFGGQ 129
GA VA+V+ D+GAGLA SGLGAG Q GLA ++G FGGQ
Sbjct 120 IGASVANVVAADIGAGLASGLTSGLGAGLWSQSGLGWQTGVGGVVPGLAYTQATGDFGGQ 179
Query 130 VGLAAQVGLGFTAVIEAEVGAQVGAGLGIG----TGLGAQAGMGF 170
VGLA+QVGLGF A I+A GAQ AGLG+G TGLGAQ G+G
Sbjct 180 VGLASQVGLGFGAGIQAGFGAQASAGLGLGFGAQTGLGAQTGLGI 224
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/155 (43%), Positives = 77/155 (50%), Gaps = 30/155 (19%)
Query 353 HGDILGHEGAALGSVDTVNAGVTPVEHGLVLPSG-------------------------- 386
HGDILG EG LG V+ G+ PVEHG +P+G
Sbjct 803 HGDILGQEGTTLGGNGGVSGGIPPVEHGPTIPTGQGPVIQGGGGAGAGAGGQVSPPSGNG 862
Query 387 PLIHG--GTGGYGGMNPPVTDAPAPQVPARAQPMTTAAEHTPAVTQPQHTPVEPPVHDKP 444
P+I G+GG NPPV +APAP V T EH P VT H P E P H +P
Sbjct 863 PVIQSPGAGAGHGGANPPVINAPAPHVATPTPAHTPPVEHAPVVTPQPHVPAEQPAHHEP 922
Query 445 PSHSVFDVGHEPPVTHTPPAPIELPSYGLFGLPGF 479
PS SVF GHEPPVTHTPP ++ PS+G GF
Sbjct 923 PSPSVF--GHEPPVTHTPPVHVDPPSHGPVDPHGF 955
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 64/139 (47%), Positives = 74/139 (54%), Gaps = 46/139 (33%)
Query 177 GLGGQAGGVIGGSAAGAIGAGVGGRLGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGV 236
GL GQAG + G A A AG+ G+ G +A Q AG+ QAGIASQ G+
Sbjct 521 GLAGQAG--LAGQAGIASQAGLAGQAG------IASQ--------AGIASQAGIASQAGL 564
Query 237 SAG--------GGLG--------------------GVGNVSGLTGVSSNAVLASNASGQA 268
+AG GLG GVGNVSGLTG+ NA L A+GQA
Sbjct 565 AAGGSAGIASQAGLGIGGQAALGGQAGAAVGGGLAGVGNVSGLTGIGGNASL--GATGQA 622
Query 269 GLIASEGAALNGAAMPHLS 287
GLIASEGAALNGAA PH+S
Sbjct 623 GLIASEGAALNGAATPHVS 641
>gi|240171624|ref|ZP_04750283.1| membrane protein, IniB [Mycobacterium kansasii ATCC 12478]
Length=183
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/128 (43%), Positives = 62/128 (49%), Gaps = 31/128 (24%)
Query 355 DILGHEGAALGSVDTVNAGVTPVEHGLVLPS------------------------GPLIH 390
DILGHEGAALG V+AG TP EHG +P+ GP++H
Sbjct 36 DILGHEGAALGG--GVSAGSTPAEHGPTVPTVHGPVIQGGAGAGADGQVTPPSAGGPVVH 93
Query 391 G-GTGGYGGMNPPVTDAPAPQVPARAQPM--TTAAEHTPAVTQPQHTPVEPPVHDKPPSH 447
G G GG PPV APAP P EH P +T +H VEPPV +PPS
Sbjct 94 SPGAVGLGGAQPPVISAPAPHAPTPTPAPAHIPPVEHAPVITPQEHVSVEPPVQHEPPSP 153
Query 448 SVFDVGHE 455
SVF GHE
Sbjct 154 SVF--GHE 159
>gi|226304833|ref|YP_002764791.1| hypothetical protein RER_13440 [Rhodococcus erythropolis PR4]
gi|226183948|dbj|BAH32052.1| hypothetical protein RER_13440 [Rhodococcus erythropolis PR4]
Length=761
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/45 (38%), Positives = 31/45 (69%), Gaps = 0/45 (0%)
Query 2 TSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVA 46
+++++IL L R ++AA ++ A P A+ +AGL D++P I +VA
Sbjct 4 NAVLEFILGLLRDDEAAANYCANPTAALNAAGLCDVSPADIVAVA 48
>gi|229492004|ref|ZP_04385820.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229321089|gb|EEN86894.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=396
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/45 (38%), Positives = 31/45 (69%), Gaps = 0/45 (0%)
Query 2 TSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVA 46
+++++IL L R ++AA ++ A P A+ +AGL D++P I +VA
Sbjct 4 NAVLEFILGLLRDDEAAANYCANPTAALDAAGLCDVSPADIVAVA 48
>gi|111022452|ref|YP_705424.1| hypothetical protein RHA1_ro05486 [Rhodococcus jostii RHA1]
gi|110821982|gb|ABG97266.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=1167
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (63%), Gaps = 0/45 (0%)
Query 2 TSLIDYILSLFRSEDAARSFVAAPGRAMTSAGLIDIAPHQISSVA 46
+++D+IL L R E AA ++ A P A+ +AGL ++ I SVA
Sbjct 54 NAVLDFILGLLRDEQAAAAYCANPTEALCAAGLQGVSHADIVSVA 98
Lambda K H
0.313 0.136 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1022124403104
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40