BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0343 Length=493 Score E Sequences producing significant alignments: (Bits) Value gi|15607484|ref|NP_214857.1| isoniazid inductible gene protein I... 970 0.0 gi|294995100|ref|ZP_06800791.1| isoniazid inductible protein ini... 967 0.0 gi|289572929|ref|ZP_06453156.1| isoniazid inducible protein iniC... 967 0.0 gi|306796077|ref|ZP_07434379.1| isoniazid inducible gene protein... 967 0.0 gi|240171626|ref|ZP_04750285.1| isoniazid inductible protein Ini... 830 0.0 gi|183980642|ref|YP_001848933.1| isoniazid inductible protein In... 817 0.0 gi|118616401|ref|YP_904733.1| protein IniC [Mycobacterium ulcera... 811 0.0 gi|167967429|ref|ZP_02549706.1| isoniazid inductible gene protei... 809 0.0 gi|118468589|ref|YP_885105.1| isoniazid inductible protein IniC ... 725 0.0 gi|315442168|ref|YP_004075047.1| hypothetical protein Mspyr1_050... 717 0.0 gi|296167743|ref|ZP_06849960.1| isoniazid inducible protein IniC... 713 0.0 gi|126433047|ref|YP_001068738.1| isoniazid inductible gene prote... 699 0.0 gi|108797428|ref|YP_637625.1| isoniazid inductible gene protein ... 699 0.0 gi|120401641|ref|YP_951470.1| isoniazid inductible gene protein ... 690 0.0 gi|145220876|ref|YP_001131554.1| isoniazid inductible gene prote... 682 0.0 gi|169631360|ref|YP_001705009.1| isoniazid inductible gene prote... 568 8e-160 gi|111022454|ref|YP_705426.1| hypothetical protein RHA1_ro05488 ... 493 2e-137 gi|312141356|ref|YP_004008692.1| hypothetical protein REQ_40360 ... 488 9e-136 gi|325673803|ref|ZP_08153493.1| isoniazid inducible protein IniC... 488 9e-136 gi|226243454|dbj|BAH53802.1| hypothetical protein [Rhodococcus o... 488 1e-135 gi|226304835|ref|YP_002764793.1| hypothetical protein RER_13460 ... 478 1e-132 gi|229493083|ref|ZP_04386878.1| isoniazid inductible protein Ini... 473 4e-131 gi|343928327|ref|ZP_08767778.1| hypothetical protein GOALK_114_0... 429 6e-118 gi|54027384|ref|YP_121626.1| hypothetical protein nfa54100 [Noca... 412 1e-112 gi|333921736|ref|YP_004495317.1| hypothetical protein AS9A_4083 ... 386 6e-105 gi|311742257|ref|ZP_07716067.1| isoniazid inducible protein IniC... 382 8e-104 gi|331700297|ref|YP_004336536.1| GTP-binding protein HSR1-like p... 365 8e-99 gi|325964548|ref|YP_004242454.1| GTP-binding conserved hypotheti... 358 2e-96 gi|226364947|ref|YP_002782729.1| hypothetical protein ROP_55370 ... 350 2e-94 gi|220913824|ref|YP_002489133.1| hypothetical protein Achl_3083 ... 344 2e-92 gi|111022435|ref|YP_705407.1| hypothetical protein RHA1_ro05469 ... 342 9e-92 gi|119963428|ref|YP_948977.1| hypothetical protein AAur_3280 [Ar... 342 1e-91 gi|336116031|ref|YP_004570797.1| hypothetical protein MLP_03800 ... 319 6e-85 gi|300787044|ref|YP_003767335.1| GTPase [Amycolatopsis mediterra... 293 5e-77 gi|145594199|ref|YP_001158496.1| HSR1-like GTP-binding protein [... 292 8e-77 gi|159037268|ref|YP_001536521.1| HSR1-like GTP-binding protein [... 290 6e-76 gi|324997179|ref|ZP_08118291.1| hypothetical protein PseP1_00379... 286 7e-75 gi|134096910|ref|YP_001102571.1| isoniazid inductible gene prote... 243 5e-62 gi|158315597|ref|YP_001508105.1| HSR1-like GTP-binding protein [... 212 9e-53 gi|256374708|ref|YP_003098368.1| hypothetical protein Amir_0555 ... 201 2e-49 gi|300783415|ref|YP_003763706.1| GTPase [Amycolatopsis mediterra... 181 2e-43 gi|257057626|ref|YP_003135458.1| hypothetical protein Svir_36810... 177 3e-42 gi|254426080|ref|ZP_05039797.1| GTPase, putative [Synechococcus ... 170 5e-40 gi|291006115|ref|ZP_06564088.1| hypothetical protein SeryN2_1647... 167 5e-39 gi|134099850|ref|YP_001105511.1| hypothetical protein SACE_3311 ... 166 9e-39 gi|302524783|ref|ZP_07277125.1| predicted protein [Streptomyces ... 164 4e-38 gi|288917779|ref|ZP_06412141.1| hypothetical protein FrEUN1fDRAF... 160 4e-37 gi|113475338|ref|YP_721399.1| HSR1-related GTP-binding protein [... 156 7e-36 gi|307154220|ref|YP_003889604.1| GTP-binding protein HSR1-like p... 152 1e-34 gi|134103688|ref|YP_001109349.1| isoniazid inductible gene prote... 142 2e-31 >gi|15607484|ref|NP_214857.1| isoniazid inductible gene protein INIC [Mycobacterium tuberculosis H37Rv] gi|15839729|ref|NP_334766.1| hypothetical protein MT0357.1 [Mycobacterium tuberculosis CDC1551] gi|31791521|ref|NP_854014.1| isoniazid inductible gene protein INIC [Mycobacterium bovis AF2122/97] 75 more sequence titles Length=493 Score = 970 bits (2507), Expect = 0.0, Method: Compositional matrix adjust. Identities = 492/493 (99%), Positives = 493/493 (100%), Gaps = 0/493 (0%) Query 1 VSTSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL 60 +STSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL Sbjct 1 MSTSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL 60 Query 61 VNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSFDLRRIN 120 VNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSFDLRRIN Sbjct 61 VNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSFDLRRIN 120 Query 121 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT 180 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT Sbjct 121 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT 180 Query 181 LNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQM 240 LNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQM Sbjct 181 LNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQM 240 Query 241 GICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDA 300 GICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDA Sbjct 241 GICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDA 300 Query 301 GIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDML 360 GIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDML Sbjct 301 GIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDML 360 Query 361 KAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIA 420 KAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIA Sbjct 361 KAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIA 420 Query 421 SLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRAAVR 480 SLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRAAVR Sbjct 421 SLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRAAVR 480 Query 481 SAEAMVAEFSARR 493 SAEAMVAEFSARR Sbjct 481 SAEAMVAEFSARR 493 >gi|294995100|ref|ZP_06800791.1| isoniazid inductible protein iniC [Mycobacterium tuberculosis 210] Length=493 Score = 967 bits (2500), Expect = 0.0, Method: Compositional matrix adjust. Identities = 491/493 (99%), Positives = 492/493 (99%), Gaps = 0/493 (0%) Query 1 VSTSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL 60 +STSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL Sbjct 1 MSTSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL 60 Query 61 VNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSFDLRRIN 120 VNALVGDD APTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSFDLRRIN Sbjct 61 VNALVGDDTAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSFDLRRIN 120 Query 121 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT 180 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT Sbjct 121 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT 180 Query 181 LNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQM 240 LNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQM Sbjct 181 LNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQM 240 Query 241 GICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDA 300 GICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDA Sbjct 241 GICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDA 300 Query 301 GIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDML 360 GIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDML Sbjct 301 GIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDML 360 Query 361 KAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIA 420 KAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIA Sbjct 361 KAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIA 420 Query 421 SLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRAAVR 480 SLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRAAVR Sbjct 421 SLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRAAVR 480 Query 481 SAEAMVAEFSARR 493 SAEAMVAEFSARR Sbjct 481 SAEAMVAEFSARR 493 >gi|289572929|ref|ZP_06453156.1| isoniazid inducible protein iniC [Mycobacterium tuberculosis K85] gi|289537360|gb|EFD41938.1| isoniazid inducible protein iniC [Mycobacterium tuberculosis K85] Length=493 Score = 967 bits (2500), Expect = 0.0, Method: Compositional matrix adjust. Identities = 491/493 (99%), Positives = 492/493 (99%), Gaps = 0/493 (0%) Query 1 VSTSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL 60 +STSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL Sbjct 1 MSTSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL 60 Query 61 VNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSFDLRRIN 120 VNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSFDLRRIN Sbjct 61 VNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSFDLRRIN 120 Query 121 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT 180 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT Sbjct 121 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT 180 Query 181 LNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQM 240 LNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQM Sbjct 181 LNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQM 240 Query 241 GICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDA 300 GICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDA Sbjct 241 GICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDA 300 Query 301 GIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDML 360 GIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDML Sbjct 301 GIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDML 360 Query 361 KAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIA 420 KAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIA Sbjct 361 KAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIA 420 Query 421 SLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRAAVR 480 SLRRII GSGTSAAARLGLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRAAVR Sbjct 421 SLRRIIDGSGTSAAARLGLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRAAVR 480 Query 481 SAEAMVAEFSARR 493 SAEAMVAEFSARR Sbjct 481 SAEAMVAEFSARR 493 >gi|306796077|ref|ZP_07434379.1| isoniazid inducible gene protein iniC [Mycobacterium tuberculosis SUMu006] gi|308343454|gb|EFP32305.1| isoniazid inducible gene protein iniC [Mycobacterium tuberculosis SUMu006] Length=493 Score = 967 bits (2499), Expect = 0.0, Method: Compositional matrix adjust. Identities = 491/493 (99%), Positives = 492/493 (99%), Gaps = 0/493 (0%) Query 1 VSTSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL 60 +STSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL Sbjct 1 MSTSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL 60 Query 61 VNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSFDLRRIN 120 VNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSFDLRRIN Sbjct 61 VNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSFDLRRIN 120 Query 121 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT 180 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT Sbjct 121 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT 180 Query 181 LNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQM 240 LNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQM Sbjct 181 LNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQM 240 Query 241 GICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDA 300 GICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDA Sbjct 241 GICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDA 300 Query 301 GIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDML 360 GIRAQLLERFGMFGIRMS AVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDML Sbjct 301 GIRAQLLERFGMFGIRMSNAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDML 360 Query 361 KAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIA 420 KAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIA Sbjct 361 KAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIA 420 Query 421 SLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRAAVR 480 SLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRAAVR Sbjct 421 SLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRAAVR 480 Query 481 SAEAMVAEFSARR 493 SAEAMVAEFSARR Sbjct 481 SAEAMVAEFSARR 493 >gi|240171626|ref|ZP_04750285.1| isoniazid inductible protein IniC [Mycobacterium kansasii ATCC 12478] Length=493 Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust. Identities = 418/493 (85%), Positives = 452/493 (92%), Gaps = 0/493 (0%) Query 1 VSTSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL 60 +ST+DRVRAIL TI+AYRG PAYRQR DVF +L+RI ARL EP+RIALAGTLKAGKSTL Sbjct 1 MSTTDRVRAILGGTIEAYRGEPAYRQRADVFYELERIRARLGEPIRIALAGTLKAGKSTL 60 Query 61 VNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSFDLRRIN 120 VNALVGDDIAPTDATEATRIVTWFRHGP PRVTANHRGGRR NVPIT RGGLSFDL R++ Sbjct 61 VNALVGDDIAPTDATEATRIVTWFRHGPAPRVTANHRGGRRTNVPITHRGGLSFDLSRLD 120 Query 121 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT 180 PA+++DL+VEWPAEEL ATI+DTPGTSSLA D SERTLRLL+PADGVPRVDAVVFLLRT Sbjct 121 PADVVDLDVEWPAEELAGATIIDTPGTSSLARDTSERTLRLLIPADGVPRVDAVVFLLRT 180 Query 181 LNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQM 240 LNAADVALLKQIGGLVGGS GALGIIGVASRADEIGAGRIDAM+SA DVAKRFT EL++ Sbjct 181 LNAADVALLKQIGGLVGGSAGALGIIGVASRADEIGAGRIDAMVSAKDVAKRFTSELSRT 240 Query 241 GICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDA 300 G+CQAVVPVSGLLALTARTLRQ EF+AL+KLAGA+ ELN+ALLSVDRFVR DS LPVDA Sbjct 241 GVCQAVVPVSGLLALTARTLRQAEFVALKKLAGADPAELNKALLSVDRFVRPDSSLPVDA 300 Query 301 GIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDML 360 G R Q+LERFGMFGIR+SIA+LAAG+TDS+GLAAELLERSGLV LR VIDQQFAQR+DML Sbjct 301 GTRVQVLERFGMFGIRISIALLAAGITDSSGLAAELLERSGLVELRKVIDQQFAQRADML 360 Query 361 KAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIA 420 KAHTALVSLRRFVQ HPV ATPYVIADIDPLLADTHAFEELR+LSLLPSR TTLN+DE++ Sbjct 361 KAHTALVSLRRFVQLHPVMATPYVIADIDPLLADTHAFEELRVLSLLPSRTTTLNEDELS 420 Query 421 SLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRAAVR 480 SLRRIIGGSGTS AARLGL P N + PRAALAA Q WRRRA HPLNDPFTTRACRAAVR Sbjct 421 SLRRIIGGSGTSPAARLGLSPENYHDGPRAALAAVQRWRRRAEHPLNDPFTTRACRAAVR 480 Query 481 SAEAMVAEFSARR 493 SAEAMVA F+ARR Sbjct 481 SAEAMVAGFAARR 493 >gi|183980642|ref|YP_001848933.1| isoniazid inductible protein IniC [Mycobacterium marinum M] gi|183173968|gb|ACC39078.1| isoniazid inductible protein IniC [Mycobacterium marinum M] Length=493 Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/493 (88%), Positives = 454/493 (93%), Gaps = 0/493 (0%) Query 1 VSTSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL 60 +STSDRVRAIL TIQAYRG PAYRQR DVF +LDRIGARL+EP+RIALAGTLKAGKSTL Sbjct 1 MSTSDRVRAILGGTIQAYRGEPAYRQRADVFYELDRIGARLSEPIRIALAGTLKAGKSTL 60 Query 61 VNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSFDLRRIN 120 VNALVGDDIAPTDATEATRIVT FRHGPTPRVTANHRGGRR NVPIT R GLSFDLRR+N Sbjct 61 VNALVGDDIAPTDATEATRIVTGFRHGPTPRVTANHRGGRRVNVPITHRDGLSFDLRRLN 120 Query 121 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT 180 PAE+ DL+VEWPAEEL++ TI+DTPGTSSL D SERTLRLLVPADGVPRVDAVVFLLRT Sbjct 121 PAEIADLDVEWPAEELVNTTIIDTPGTSSLNRDTSERTLRLLVPADGVPRVDAVVFLLRT 180 Query 181 LNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQM 240 LNAAD+ALLKQIGGLVG S GALGIIGVASRADEIGAGRIDAM SA DVAKRFT EL+Q Sbjct 181 LNAADIALLKQIGGLVGDSAGALGIIGVASRADEIGAGRIDAMSSAQDVAKRFTAELSQT 240 Query 241 GICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDA 300 GICQAVVPVSGLLALTARTLRQ+EF AL+KLAGA+ TELN+ALLSVDRFVR DSPLPVDA Sbjct 241 GICQAVVPVSGLLALTARTLRQSEFAALKKLAGADSTELNKALLSVDRFVRPDSPLPVDA 300 Query 301 GIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDML 360 G RAQLLERFGMFGIR+SIA LAAG+ DS GLAAELLERSGLVALR VIDQQFAQRSDML Sbjct 301 GTRAQLLERFGMFGIRISIAGLAAGIADSAGLAAELLERSGLVALREVIDQQFAQRSDML 360 Query 361 KAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIA 420 KAHTALVSLRRFVQ HPV ATPYVIADIDPLLADTHAFEELR+LSLLPS+ATTLND+E+ Sbjct 361 KAHTALVSLRRFVQAHPVMATPYVIADIDPLLADTHAFEELRVLSLLPSQATTLNDEELV 420 Query 421 SLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRAAVR 480 SLRRIIGGSGTS AARLGLDP + + PRAA AAAQ WRRRA HPLNDPFTTRACRAAVR Sbjct 421 SLRRIIGGSGTSPAARLGLDPQHRHDGPRAAFAAAQRWRRRADHPLNDPFTTRACRAAVR 480 Query 481 SAEAMVAEFSARR 493 SAEAMVAEF+ARR Sbjct 481 SAEAMVAEFAARR 493 >gi|118616401|ref|YP_904733.1| protein IniC [Mycobacterium ulcerans Agy99] gi|118568511|gb|ABL03262.1| conserved protein IniC [Mycobacterium ulcerans Agy99] Length=493 Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/493 (87%), Positives = 452/493 (92%), Gaps = 0/493 (0%) Query 1 VSTSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL 60 +STSDRVRAIL TIQAYRG PAYRQR DVF +LDRIGARL+EP+RIALAGTLKAGKSTL Sbjct 1 MSTSDRVRAILGGTIQAYRGEPAYRQRADVFYELDRIGARLSEPIRIALAGTLKAGKSTL 60 Query 61 VNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSFDLRRIN 120 VNALVGDDIAPTDATEATRIVT FRHGPTPRVTANHRGG R NVPIT R GLSFDLRR+N Sbjct 61 VNALVGDDIAPTDATEATRIVTGFRHGPTPRVTANHRGGCRVNVPITHRDGLSFDLRRLN 120 Query 121 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT 180 PAE+ DL+VEWPAEEL++ TI+DTPGTSSL D SERTLRLLVPADGVPRVDAVVFLLRT Sbjct 121 PAEIADLDVEWPAEELVNTTIIDTPGTSSLNRDTSERTLRLLVPADGVPRVDAVVFLLRT 180 Query 181 LNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQM 240 LNAAD+ALLKQIGGLVG S GALGIIGVASRADEIGAGRIDAM SA DVAKRFT EL+Q Sbjct 181 LNAADIALLKQIGGLVGDSAGALGIIGVASRADEIGAGRIDAMSSAQDVAKRFTAELSQT 240 Query 241 GICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDA 300 GICQAVVPVSGLLALTARTLRQ+EF AL+KLAGA+ TELN+ALLSVDRFVR DSPLPVDA Sbjct 241 GICQAVVPVSGLLALTARTLRQSEFAALKKLAGADSTELNKALLSVDRFVRPDSPLPVDA 300 Query 301 GIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDML 360 G RAQLLERFGMFGIR+SIA LAAG+ DS GLAAELLERSGLVALR VIDQQFAQRSDML Sbjct 301 GTRAQLLERFGMFGIRISIAGLAAGIADSAGLAAELLERSGLVALREVIDQQFAQRSDML 360 Query 361 KAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIA 420 KAH ALVSLRRFVQ HPV ATPYVIADIDPLLADTHAFEELR+LSLLPS+ATTLND+E+ Sbjct 361 KAHAALVSLRRFVQAHPVMATPYVIADIDPLLADTHAFEELRVLSLLPSQATTLNDEELV 420 Query 421 SLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRAAVR 480 SLRRIIGGSGTS AARLGLDP + + PRAA AAAQ WRRRA HPLNDPFTTRACRAAVR Sbjct 421 SLRRIIGGSGTSPAARLGLDPQHRHDGPRAAFAAAQRWRRRADHPLNDPFTTRACRAAVR 480 Query 481 SAEAMVAEFSARR 493 SAEAMVAEF+ARR Sbjct 481 SAEAMVAEFAARR 493 >gi|167967429|ref|ZP_02549706.1| isoniazid inductible gene protein iniC [Mycobacterium tuberculosis H37Ra] Length=413 Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/411 (99%), Positives = 411/411 (100%), Gaps = 0/411 (0%) Query 1 VSTSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL 60 +STSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL Sbjct 1 MSTSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL 60 Query 61 VNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSFDLRRIN 120 VNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSFDLRRIN Sbjct 61 VNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSFDLRRIN 120 Query 121 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT 180 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT Sbjct 121 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT 180 Query 181 LNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQM 240 LNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQM Sbjct 181 LNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQM 240 Query 241 GICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDA 300 GICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDA Sbjct 241 GICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDA 300 Query 301 GIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDML 360 GIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDML Sbjct 301 GIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDML 360 Query 361 KAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRA 411 KAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRA Sbjct 361 KAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRA 411 >gi|118468589|ref|YP_885105.1| isoniazid inductible protein IniC [Mycobacterium smegmatis str. MC2 155] gi|118169876|gb|ABK70772.1| isoniazid inductible protein IniC [Mycobacterium smegmatis str. MC2 155] Length=497 Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/496 (77%), Positives = 435/496 (88%), Gaps = 3/496 (0%) Query 1 VSTSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL 60 +ST D+VRAIL T+QAYRG PAYR R DV +L+RIG +L +P+RIALAGTLKAGKSTL Sbjct 1 MSTGDQVRAILRGTVQAYRGDPAYRHRPDVHNELERIGWQLNQPIRIALAGTLKAGKSTL 60 Query 61 VNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRG---GLSFDLR 117 VNAL+G++IAPTDATEATRIVTWFRHGPTP+VTANHRGGRR+NVPI R GL+F Sbjct 61 VNALLGEEIAPTDATEATRIVTWFRHGPTPKVTANHRGGRRSNVPIVRDPHDRGLTFRFD 120 Query 118 RINPAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFL 177 ++P E++DL+VEWPA ELID TI+DTPGTSSL+ D SERT RLLVP DGVPRVDAVVFL Sbjct 121 GLDPGEILDLDVEWPAVELIDTTIIDTPGTSSLSQDVSERTYRLLVPDDGVPRVDAVVFL 180 Query 178 LRTLNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTREL 237 LRTLNAAD+ALLKQIG LVGGS GALG+IGVASRADEIGAGRIDAM+SA DVAKRFT E+ Sbjct 181 LRTLNAADIALLKQIGELVGGSSGALGVIGVASRADEIGAGRIDAMMSAKDVAKRFTAEM 240 Query 238 NQMGICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLP 297 ++ GICQAVVPVSGLLA+TARTLRQ+EF+AL KLAG + EL +A+LSVDRFVR DS LP Sbjct 241 DKTGICQAVVPVSGLLAVTARTLRQSEFVALEKLAGVDPAELAKAMLSVDRFVREDSALP 300 Query 298 VDAGIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRS 357 VDA RA LL+RFGMFGIR+SIAVL AGV+DS LA ELLERSGL+ALR+VIDQQFAQRS Sbjct 301 VDAATRAALLDRFGMFGIRISIAVLRAGVSDSVALADELLERSGLIALRDVIDQQFAQRS 360 Query 358 DMLKAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDD 417 ++LKAHTAL+SLR+FVQ +P+ ATPY++ADI+PLLADTHAFEELR+LS L SR TTLN+D Sbjct 361 ELLKAHTALLSLRQFVQHNPIYATPYILADIEPLLADTHAFEELRLLSQLRSRPTTLNED 420 Query 418 EIASLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRA 477 E+ASLRRIIGGSGT AA+RLGL P + PRAA AAAQ WRRRA HPLNDPFTTRACRA Sbjct 421 EMASLRRIIGGSGTDAASRLGLTPDAPYDGPRAAFAAAQRWRRRAEHPLNDPFTTRACRA 480 Query 478 AVRSAEAMVAEFSARR 493 AVRSAEA+VAE++AR+ Sbjct 481 AVRSAEALVAEYAARQ 496 >gi|315442168|ref|YP_004075047.1| hypothetical protein Mspyr1_05030 [Mycobacterium sp. Spyr1] gi|315260471|gb|ADT97212.1| hypothetical protein Mspyr1_05030 [Mycobacterium sp. Spyr1] Length=497 Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust. Identities = 382/495 (78%), Positives = 426/495 (87%), Gaps = 3/495 (0%) Query 1 VSTSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL 60 +STSD VRAIL TI AYR PAYR R DV +LDRIG RL EP+RIALAGTLKAGKSTL Sbjct 1 MSTSDHVRAILDGTIGAYRSDPAYRHRPDVHAELDRIGRRLNEPMRIALAGTLKAGKSTL 60 Query 61 VNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRR---GGLSFDLR 117 VNALVG+ IAPTDATEATRIVTWFRHGPTP+VTANHRGGRR NVPI R GGL+FD Sbjct 61 VNALVGETIAPTDATEATRIVTWFRHGPTPKVTANHRGGRRTNVPIARDPHAGGLTFDFA 120 Query 118 RINPAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFL 177 R++P +++DL+VEWPA EL+DATI+DTPGTSSL+ D S RTLRLLVP DGVPRVDAVVFL Sbjct 121 RLDPDDVLDLDVEWPASELVDATIIDTPGTSSLSKDVSARTLRLLVPDDGVPRVDAVVFL 180 Query 178 LRTLNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTREL 237 LRTLNA D+ALLKQIG LVGGS GALG+IGVASRADEIGAGR DAM+SA DVA RFT+E+ Sbjct 181 LRTLNAPDIALLKQIGELVGGSSGALGVIGVASRADEIGAGRDDAMMSAGDVAARFTKEM 240 Query 238 NQMGICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLP 297 Q GICQAVVPVSGLLALTARTLRQ+EF AL KLAG E EL +A+LSVDRFVR DSPLP Sbjct 241 EQTGICQAVVPVSGLLALTARTLRQSEFGALDKLAGVEPAELAKAMLSVDRFVREDSPLP 300 Query 298 VDAGIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRS 357 VDA RA LL+RFGMFG+R+SIAVL AGV DS LA ELLERSGLVALR+VIDQQFAQRS Sbjct 301 VDAATRAALLDRFGMFGLRISIAVLRAGVRDSVALAEELLERSGLVALRDVIDQQFAQRS 360 Query 358 DMLKAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDD 417 D+LKAHTAL+SLR+FVQ +PV ATP ++ADI+PLLADTHAFEELR+LS L SR TTLNDD Sbjct 361 DLLKAHTALLSLRQFVQRNPVYATPRILADIEPLLADTHAFEELRLLSRLRSRPTTLNDD 420 Query 418 EIASLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRA 477 E+ASLRR+IGGSGT A+RLGL P + + PRAA AA Q WRRRA HPLNDPFT RACRA Sbjct 421 EMASLRRVIGGSGTDVASRLGLPPGDESDGPRAAFAAVQRWRRRADHPLNDPFTARACRA 480 Query 478 AVRSAEAMVAEFSAR 492 AVRSAEA+VA+++ R Sbjct 481 AVRSAEAIVADYARR 495 >gi|296167743|ref|ZP_06849960.1| isoniazid inducible protein IniC [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897086|gb|EFG76701.1| isoniazid inducible protein IniC [Mycobacterium parascrofulaceum ATCC BAA-614] Length=502 Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust. Identities = 377/481 (79%), Positives = 425/481 (89%), Gaps = 0/481 (0%) Query 1 VSTSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL 60 +STS++VRAIL T++AY+ PAYRQR DVF +L RI ARL EP+RIALAGTLKAGKSTL Sbjct 1 MSTSEQVRAILGGTLRAYQAEPAYRQRPDVFHELQRIAARLNEPMRIALAGTLKAGKSTL 60 Query 61 VNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSFDLRRIN 120 VNALVG+ +APTDATEATRIVTWFRHGPTP+V ANHRGGRR++VPI R GGL FDL +N Sbjct 61 VNALVGETVAPTDATEATRIVTWFRHGPTPKVIANHRGGRRSHVPIMRDGGLGFDLSGLN 120 Query 121 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT 180 P +++DL+V+WPA+ELI TI+DTPGTSSLA D S RT RLLVP DG+PRVDAVVFLLRT Sbjct 121 PNDVVDLDVQWPADELIATTIIDTPGTSSLARDVSARTHRLLVPEDGMPRVDAVVFLLRT 180 Query 181 LNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQM 240 LNAADVALLKQIG LVGG+ GALGIIGVASRADEIGAGR+DAMLSA DVAKRFTREL+Q Sbjct 181 LNAADVALLKQIGDLVGGAAGALGIIGVASRADEIGAGRLDAMLSAEDVAKRFTRELSQT 240 Query 241 GICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDA 300 G+CQAVVPVSGLLALTARTLRQ+EF AL+KLAG + EL +A+LS DRFVR DSPLPVDA Sbjct 241 GVCQAVVPVSGLLALTARTLRQSEFGALQKLAGVDAAELLKAMLSADRFVRPDSPLPVDA 300 Query 301 GIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDML 360 RA+LL+RFGMFGIR+SIAVL AGVTD+ GLA ELLERSGLVALRNV+DQQFAQRSDML Sbjct 301 ATRARLLDRFGMFGIRISIAVLKAGVTDAAGLADELLERSGLVALRNVVDQQFAQRSDML 360 Query 361 KAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIA 420 KAHTALVSLRRFV+ +P+ TP ++ADIDPLLADTHAFEELR+LS L SRAT L+D+E+A Sbjct 361 KAHTALVSLRRFVEAYPIAGTPRILADIDPLLADTHAFEELRLLSQLHSRATALHDEELA 420 Query 421 SLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRAAVR 480 SLRR+IGGSGT AA+RLGL P +APRAA AAAQ WRRRA HPLNDPFTTRACRAAVR Sbjct 421 SLRRLIGGSGTDAASRLGLAPEAHHDAPRAAFAAAQRWRRRAEHPLNDPFTTRACRAAVR 480 Query 481 S 481 S Sbjct 481 S 481 >gi|126433047|ref|YP_001068738.1| isoniazid inductible gene protein IniC [Mycobacterium sp. JLS] gi|126232847|gb|ABN96247.1| isoniazid inducible protein IniC [Mycobacterium sp. JLS] Length=502 Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/482 (79%), Positives = 422/482 (88%), Gaps = 7/482 (1%) Query 7 VRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNALVG 66 +RAIL TI AYR PAYRQR +V +L+RIGARL +P+RIALAGTLKAGKSTLVNALVG Sbjct 1 MRAILGGTIAAYRDDPAYRQRPEVHNELERIGARLNQPIRIALAGTLKAGKSTLVNALVG 60 Query 67 DDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRG-------GLSFDLRRI 119 ++IAPTDATEATRIVTWFRHGPTP+VTANHRGGRR+NVPI RR GL+FDL R+ Sbjct 61 EEIAPTDATEATRIVTWFRHGPTPKVTANHRGGRRSNVPIARRSSGPADERGLTFDLARL 120 Query 120 NPAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLR 179 +P +++DL+VEWPA ELID+TI+DTPGTSSL+ D SERTLRLLVP DGVPRVDAVVFLLR Sbjct 121 DPDDVLDLDVEWPAAELIDSTIIDTPGTSSLSRDVSERTLRLLVPGDGVPRVDAVVFLLR 180 Query 180 TLNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQ 239 TLNAAD+ALLKQIG LVGGS GALG+IGVASRADEIGAGRIDAMLSA DVA RFT E+++ Sbjct 181 TLNAADIALLKQIGELVGGSSGALGVIGVASRADEIGAGRIDAMLSAKDVATRFTEEMDR 240 Query 240 MGICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVD 299 GICQAVVPVSGLLALTARTLRQ+EF+AL KLAG + EL +A+LSVDRFVR DSPLPVD Sbjct 241 TGICQAVVPVSGLLALTARTLRQSEFVALEKLAGVDPAELAKAMLSVDRFVREDSPLPVD 300 Query 300 AGIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDM 359 A RA LL+RFGMFG+R+SIAVL AGV DS LA ELLERSGLVALR+VIDQQFAQRSD+ Sbjct 301 ASTRAALLDRFGMFGVRISIAVLRAGVKDSVALADELLERSGLVALRDVIDQQFAQRSDL 360 Query 360 LKAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEI 419 LKAHTAL+SLR+FVQ +P+ ATPY+IADIDPLLADTHAFEELR+LS L SR TTL DDE+ Sbjct 361 LKAHTALLSLRQFVQLNPIYATPYIIADIDPLLADTHAFEELRLLSQLRSRTTTLTDDEM 420 Query 420 ASLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRAAV 479 ASLRR+IGGSGT AA+RLGL P + + PRAA AAAQ WRRRA HPLNDPFT RACRAAV Sbjct 421 ASLRRLIGGSGTDAASRLGLQPEDPYDGPRAAFAAAQRWRRRAEHPLNDPFTARACRAAV 480 Query 480 RS 481 RS Sbjct 481 RS 482 >gi|108797428|ref|YP_637625.1| isoniazid inductible gene protein IniC [Mycobacterium sp. MCS] gi|119866512|ref|YP_936464.1| isoniazid inductible gene protein IniC [Mycobacterium sp. KMS] gi|108767847|gb|ABG06569.1| isoniazid inducible protein IniC [Mycobacterium sp. MCS] gi|119692601|gb|ABL89674.1| isoniazid inducible protein IniC [Mycobacterium sp. KMS] Length=502 Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust. Identities = 375/482 (78%), Positives = 422/482 (88%), Gaps = 7/482 (1%) Query 7 VRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNALVG 66 +RAIL TI AYR PAYRQR +V +L+RIGARL +P+RIALAGTLKAGKSTLVNALVG Sbjct 1 MRAILGGTIAAYRDDPAYRQRPEVHNELERIGARLNQPIRIALAGTLKAGKSTLVNALVG 60 Query 67 DDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRG-------GLSFDLRRI 119 ++IAPTDATEATRIVTWFRHGPTP+VTANHRGGRR+NVPI RR GL+FDL R+ Sbjct 61 EEIAPTDATEATRIVTWFRHGPTPKVTANHRGGRRSNVPIARRSSGPADERGLTFDLARL 120 Query 120 NPAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLR 179 +P +++DL+VEWPA ELID+TI+DTPGTSSL+ D SERTLRLLVP DGVPRVDAVVFLLR Sbjct 121 DPDDVLDLDVEWPAAELIDSTIIDTPGTSSLSRDVSERTLRLLVPGDGVPRVDAVVFLLR 180 Query 180 TLNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQ 239 TLNAAD+ALLKQIG LVGGS GALG+IGVASRADEIGAGRIDAMLSA DVA RFT E+++ Sbjct 181 TLNAADIALLKQIGELVGGSSGALGVIGVASRADEIGAGRIDAMLSAKDVATRFTEEMDR 240 Query 240 MGICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVD 299 GICQAVVPVSGLLALTARTLRQ+EF+AL KLAG + EL +A+LSVDRFVR DSPLP+D Sbjct 241 TGICQAVVPVSGLLALTARTLRQSEFVALEKLAGVDPAELAKAMLSVDRFVREDSPLPID 300 Query 300 AGIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDM 359 A RA LL+RFGMFG+R+SIAVL AGV DS LA ELLERSGLVALR+VIDQQFAQRSD+ Sbjct 301 AATRAALLDRFGMFGVRISIAVLRAGVKDSVALADELLERSGLVALRDVIDQQFAQRSDL 360 Query 360 LKAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEI 419 LKAHTAL+SLR+FVQ +P+ ATPY+IADIDPLLADTHAFEELR+LS L SR TTL DDE+ Sbjct 361 LKAHTALLSLRQFVQLNPIYATPYIIADIDPLLADTHAFEELRLLSQLRSRTTTLTDDEM 420 Query 420 ASLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRAAV 479 ASLRR+IGGSGT AA+RLGL P + + PRAA AAAQ WRRRA HPLNDPFT RACRAAV Sbjct 421 ASLRRLIGGSGTDAASRLGLQPEDPYDGPRAAFAAAQRWRRRAEHPLNDPFTARACRAAV 480 Query 480 RS 481 RS Sbjct 481 RS 482 >gi|120401641|ref|YP_951470.1| isoniazid inductible gene protein IniC [Mycobacterium vanbaalenii PYR-1] gi|119954459|gb|ABM11464.1| isoniazid inducible protein IniC [Mycobacterium vanbaalenii PYR-1] Length=496 Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust. Identities = 375/494 (76%), Positives = 426/494 (87%), Gaps = 10/494 (2%) Query 7 VRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNALVG 66 +RAIL TI AYR PAYRQR D+ +L+RIG RL EP+RIALAGTLKAGKSTLVNALVG Sbjct 1 MRAILGGTIAAYRADPAYRQRPDLHAELERIGRRLNEPMRIALAGTLKAGKSTLVNALVG 60 Query 67 DDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITR-------RGGLSFDLRRI 119 D+IAPTDATEATRIVTWFRHGPTP+VTANHRGGRR+NVPITR R GL+FD + Sbjct 61 DEIAPTDATEATRIVTWFRHGPTPKVTANHRGGRRSNVPITRDRADPQGRRGLTFDFASL 120 Query 120 NPAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLR 179 +P +++DL+VEWPA ELIDATI+DTPGTSSL+ D S RTLRLLVP DGVPRVDAVVFLLR Sbjct 121 DPDDVVDLDVEWPAAELIDATIIDTPGTSSLSQDVSARTLRLLVPDDGVPRVDAVVFLLR 180 Query 180 TLNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQ 239 TLNAAD+ALLKQIG LVGG+ GALG+IGVASRADEIGAGRIDAM+SA DVA+RFT E+ + Sbjct 181 TLNAADIALLKQIGELVGGAAGALGVIGVASRADEIGAGRIDAMMSARDVAQRFTAEMER 240 Query 240 MGICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSP---L 296 GICQAVVPVSGLLALTARTLRQ+EF+AL+KL+ E +L +A+LSVDRFVR DS L Sbjct 241 TGICQAVVPVSGLLALTARTLRQSEFVALKKLSEVEPAQLAKAMLSVDRFVRADSEDTAL 300 Query 297 PVDAGIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQR 356 PV +G RA+LL+RFGMFGIR++IAVL AGV DS LA ELLERSGL ALR VIDQQFAQR Sbjct 301 PVSSGTRAELLDRFGMFGIRIAIAVLRAGVGDSVALADELLERSGLPALREVIDQQFAQR 360 Query 357 SDMLKAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLND 416 SD+LKAHTAL+SLR+FVQ HP+ ATP ++ADI+PLLADTHAFEELR+LS L SRATTLND Sbjct 361 SDLLKAHTALLSLRQFVQRHPIYATPRILADIEPLLADTHAFEELRLLSQLRSRATTLND 420 Query 417 DEIASLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACR 476 DE+ASLRR+IGGSGT AA+RLGL P + PRAA AAAQ WRRRA HPLNDPFT RACR Sbjct 421 DEMASLRRLIGGSGTDAASRLGLSPDTVGDGPRAAFAAAQRWRRRAEHPLNDPFTARACR 480 Query 477 AAVRSAEAMVAEFS 490 AAVRSAEA+VAE++ Sbjct 481 AAVRSAEALVAEYA 494 >gi|145220876|ref|YP_001131554.1| isoniazid inductible gene protein IniC [Mycobacterium gilvum PYR-GCK] gi|145213362|gb|ABP42766.1| isoniazid inducible protein IniC [Mycobacterium gilvum PYR-GCK] Length=468 Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/466 (78%), Positives = 406/466 (88%), Gaps = 3/466 (0%) Query 30 VFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNALVGDDIAPTDATEATRIVTWFRHGPT 89 + +LDRIG RL EP+RIALAGTLKAGKSTLVNALVG+ IAPTDATEATRIVTWFRHGPT Sbjct 1 MHAELDRIGRRLNEPMRIALAGTLKAGKSTLVNALVGETIAPTDATEATRIVTWFRHGPT 60 Query 90 PRVTANHRGGRRANVPITRR---GGLSFDLRRINPAELIDLEVEWPAEELIDATIVDTPG 146 P+VTANHRGGRR NVPI R GGL+FD R++P +++DL+VEWPA EL+DATI+DTPG Sbjct 61 PKVTANHRGGRRTNVPIARDPHAGGLTFDFARLDPDDVLDLDVEWPASELVDATIIDTPG 120 Query 147 TSSLACDASERTLRLLVPADGVPRVDAVVFLLRTLNAADVALLKQIGGLVGGSVGALGII 206 TSSL+ D S RTLRLLVP DGVPRVDAVVFLLRTLNA D+ALLKQIG LVGGS GALG+I Sbjct 121 TSSLSKDVSARTLRLLVPDDGVPRVDAVVFLLRTLNAPDIALLKQIGELVGGSSGALGVI 180 Query 207 GVASRADEIGAGRIDAMLSANDVAKRFTRELNQMGICQAVVPVSGLLALTARTLRQTEFI 266 GVASRADEIGAGRIDAM+SA DVA RFT+E+ Q GICQAVVPVSGLLALTARTLRQ+EF Sbjct 181 GVASRADEIGAGRIDAMMSAGDVAARFTKEMEQTGICQAVVPVSGLLALTARTLRQSEFG 240 Query 267 ALRKLAGAERTELNRALLSVDRFVRRDSPLPVDAGIRAQLLERFGMFGIRMSIAVLAAGV 326 AL KLAG E EL +A+LSVDRFVR DSPLPVDA RA LL+RFGMFG+R+SIAVL AGV Sbjct 241 ALDKLAGVEPAELAKAMLSVDRFVREDSPLPVDAATRAALLDRFGMFGLRISIAVLRAGV 300 Query 327 TDSTGLAAELLERSGLVALRNVIDQQFAQRSDMLKAHTALVSLRRFVQTHPVPATPYVIA 386 DS LA ELLERSGLVALR+VIDQQFAQRSD+LKAHTAL+SLR+FVQ +PV ATP ++A Sbjct 301 RDSVALAEELLERSGLVALRDVIDQQFAQRSDLLKAHTALLSLRQFVQRNPVYATPRILA 360 Query 387 DIDPLLADTHAFEELRMLSLLPSRATTLNDDEIASLRRIIGGSGTSAAARLGLDPANSRE 446 DI+PLLADTHAFEELR+LS L SR TTLNDDE+ASLRR+IGGSGT A+RLGL P + + Sbjct 361 DIEPLLADTHAFEELRLLSRLRSRPTTLNDDEMASLRRVIGGSGTDVASRLGLPPGDESD 420 Query 447 APRAALAAAQHWRRRAAHPLNDPFTTRACRAAVRSAEAMVAEFSAR 492 PRAA AA Q WRRRA HPLNDPFT RACRAAVRSAEA+VA+++ R Sbjct 421 GPRAAFAAVQRWRRRADHPLNDPFTARACRAAVRSAEAIVADYARR 466 >gi|169631360|ref|YP_001705009.1| isoniazid inductible gene protein IniC [Mycobacterium abscessus ATCC 19977] gi|169243327|emb|CAM64355.1| Isoniazid inductible gene protein IniC [Mycobacterium abscessus] Length=497 Score = 568 bits (1464), Expect = 8e-160, Method: Compositional matrix adjust. Identities = 307/492 (63%), Positives = 371/492 (76%), Gaps = 2/492 (0%) Query 1 VSTSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL 60 +S+ + R I+ ++AY+ Y + + +L RI ARL EP+R+A+AGTL AGKSTL Sbjct 1 MSSVVQARVIISDAMRAYQNDSRYLRVAEPHDELRRIAARLDEPIRVAIAGTLNAGKSTL 60 Query 61 VNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSFDLRRIN 120 VNALVG+DIAPTDATEATRIV WFRHG PRVTAN G R ++PI R GGLSF+L R++ Sbjct 61 VNALVGEDIAPTDATEATRIVAWFRHGAAPRVTANLFSGVRQDIPIRREGGLSFELDRLD 120 Query 121 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT 180 PA + DL+V WPA EL + T++DTPGTSSL+ D SER+L LLVP DGVPRVDAV+FLLR+ Sbjct 121 PASVADLDVNWPAPELNEITLIDTPGTSSLSTDVSERSLALLVPEDGVPRVDAVIFLLRS 180 Query 181 LNAADVALLKQIGGLVGGSVGALGIIGVA-SRADEIGAGRIDAMLSANDVAKRFTRELNQ 239 LNAAD+ LL QIG LVGG G + SRADEIG GR+DAMLSA +VA RF E+ + Sbjct 181 LNAADIGLLTQIGKLVGGERGGAVGVVGVVSRADEIGVGRLDAMLSAREVAARFAGEMER 240 Query 240 MGICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVD 299 GICQAVVPV+GLLALTARTLRQ EF+AL++LA + L +ALLSVDRFVR D LPVD Sbjct 241 TGICQAVVPVAGLLALTARTLRQAEFVALQRLAELDPQVLAKALLSVDRFVREDDSLPVD 300 Query 300 AGIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDM 359 A RA LL RFGMFGIR+S+AV+ GVTD+TGLA ELLERSGLV L N+I QF QR+ + Sbjct 301 AQTRAALLHRFGMFGIRISVAVMRVGVTDATGLAEELLERSGLVELHNIIANQFGQRAGI 360 Query 360 LKAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEI 419 LK+HTAL+S RR + T+PV VI DIDPLLADTHAF+ELR+L+ L SR+TTL + E Sbjct 361 LKSHTALLSARRVLTTYPVHGGRRVIDDIDPLLADTHAFDELRLLAELSSRSTTLTEHET 420 Query 420 ASLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRAAV 479 +RR++G GT AAARLGLD S + RAAL A WR RA HPLNDPFT+R C AAV Sbjct 421 MLIRRLLGSFGTDAAARLGLDETRS-DPRRAALDAVGRWRARAEHPLNDPFTSRLCLAAV 479 Query 480 RSAEAMVAEFSA 491 RSAE ++ + SA Sbjct 480 RSAEGILTQLSA 491 >gi|111022454|ref|YP_705426.1| hypothetical protein RHA1_ro05488 [Rhodococcus jostii RHA1] gi|110821984|gb|ABG97268.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=498 Score = 493 bits (1270), Expect = 2e-137, Method: Compositional matrix adjust. Identities = 269/494 (55%), Positives = 334/494 (68%), Gaps = 14/494 (2%) Query 8 RAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNALVGD 67 RA++ + Q Y G P R QL RL +PLR+ALAG+LKAGKSTL+N+LVG Sbjct 10 RALIASARQLYAGRPEIRD------QLTECARRLEQPLRVALAGSLKAGKSTLLNSLVGQ 63 Query 68 DIAPTDATEATRIVTWFRHGPTPRVTANHR------GGRRANVPITRRGG-LSFDLRRIN 120 DIAPTDATE TR+VTW+R G TP VTA ++ R ANVP+ RR G L+FDL + Sbjct 64 DIAPTDATECTRVVTWYRSGSTPTVTAWYQPDPGSGAQRSANVPVLRRDGHLTFDLGHLT 123 Query 121 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT 180 ++ L+VEWP+ L TI+DTPGTSSL+ D S RTL +L P + DAVV+LLRT Sbjct 124 ADQVDRLDVEWPSSALAHTTIIDTPGTSSLSRDVSARTLEMLTPDNEASGADAVVYLLRT 183 Query 181 LNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQM 240 LNA DV L QIG VG G LG++GV SRADE+GAGR+DAM+SA +VA RF EL + Sbjct 184 LNATDVQFLGQIGDHVGDESGPLGVVGVVSRADEVGAGRLDAMMSAKEVASRFAGELERT 243 Query 241 GICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDA 300 G+CQAVVPV+GLLAL ART+RQ EF A + LA +LN A+LS DRF R DSPLPVDA Sbjct 244 GLCQAVVPVAGLLALGARTMRQAEFTAFQHLAEVPVDDLNLAMLSADRFAREDSPLPVDA 303 Query 301 GIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDML 360 +RAQL +RFG+FGIRM++ ++ G DS LAAEL+ERSGL LR VID QF QR+D L Sbjct 304 RMRAQLADRFGLFGIRMAVTLIRLGTKDSPTLAAELVERSGLDELRQVIDIQFGQRADQL 363 Query 361 KAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIA 420 K H+ALV+L+R + HPVP ++ + LL+D H F+ELR+L L S L D++A Sbjct 364 KTHSALVALKRVLTAHPVPGAGEILMSAERLLSDVHGFQELRLLGRLRSTEVGLPADDVA 423 Query 421 SLRRIIGGSGTSAAARLGLDPANSREAPRA-ALAAAQHWRRRAAHPLNDPFTTRACRAAV 479 L+R+IGG G A RLG D +S E R ALAA + WR RA HPL D FT RAC A Sbjct 424 ELQRLIGGFGIQIAERLGTDGDDSVELQRMRALAAVRKWRERARHPLLDQFTARACTVAA 483 Query 480 RSAEAMVAEFSARR 493 RSAE ++ E + R Sbjct 484 RSAEGVLEELNTVR 497 >gi|312141356|ref|YP_004008692.1| hypothetical protein REQ_40360 [Rhodococcus equi 103S] gi|311890695|emb|CBH50014.1| hypothetical protein REQ_40360 [Rhodococcus equi 103S] Length=515 Score = 488 bits (1256), Expect = 9e-136, Method: Compositional matrix adjust. Identities = 269/489 (56%), Positives = 330/489 (68%), Gaps = 8/489 (1%) Query 3 TSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVN 62 T R R ++ A AY P R QL ARL EPLR+ALAG+LKAGKSTL+N Sbjct 6 TLGRARDLIAAAKAAYSDNPEAR------AQLAECAARLEEPLRVALAGSLKAGKSTLLN 59 Query 63 ALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGG-LSFDLRRINP 121 A VG DIAPTDATE TR+VTW+R G TP VTA + G ANV + R G L+FDL + Sbjct 60 AFVGQDIAPTDATECTRVVTWYRSGTTPTVTARYDGDASANVAVRRHEGRLTFDLGDLTA 119 Query 122 AELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRTL 181 + L+VEWPA L TI+DTPGTSSL+ D S RT R+L P + V DAVV+LLR+L Sbjct 120 DRVDRLDVEWPASALAQTTIIDTPGTSSLSKDVSARTFRMLTPENAVSGADAVVYLLRSL 179 Query 182 NAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQMG 241 +A+DV L +IG VGG G LG++GV SRADE+GAGR DAM+SA +VA RFT EL G Sbjct 180 SASDVQFLGRIGAHVGGESGPLGVVGVVSRADEVGAGRADAMMSAQEVAARFTDELELTG 239 Query 242 ICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDAG 301 +CQAVVPV+GLLAL ARTLRQ+EF A LA +L A+LS DRF R D+ LPVDA Sbjct 240 LCQAVVPVAGLLALGARTLRQSEFAAFEALARVPDADLQLAMLSADRFCRDDAALPVDAA 299 Query 302 IRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDMLK 361 +R QL +RFG+FGIR++I ++ GV DS GLAAEL+ RSGL LR VID QF QR++ LK Sbjct 300 MRRQLADRFGLFGIRLAIMLIRLGVNDSPGLAAELVARSGLDELRQVIDVQFGQRAEQLK 359 Query 362 AHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIAS 421 H+ALV+L R + HP AT ++ ++ LLAD H F+ELRML L S T L+ +++ Sbjct 360 THSALVALERVLTAHPSDATTRLLDEVGRLLADVHGFQELRMLGRLRSAETGLSAEDLTE 419 Query 422 LRRIIGGSGTSAAARLGLDPANSREAPR-AALAAAQHWRRRAAHPLNDPFTTRACRAAVR 480 L+R+IGG G A RLGL S E R A L A + WR RAAHPL D FT RACR A R Sbjct 420 LQRLIGGFGIDPAQRLGLAADASIEDGREAGLTAVRKWRERAAHPLVDQFTARACRVAAR 479 Query 481 SAEAMVAEF 489 SAE ++A+ Sbjct 480 SAEGVLADL 488 >gi|325673803|ref|ZP_08153493.1| isoniazid inducible protein IniC [Rhodococcus equi ATCC 33707] gi|325555068|gb|EGD24740.1| isoniazid inducible protein IniC [Rhodococcus equi ATCC 33707] Length=515 Score = 488 bits (1256), Expect = 9e-136, Method: Compositional matrix adjust. Identities = 264/469 (57%), Positives = 323/469 (69%), Gaps = 2/469 (0%) Query 23 AYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNALVGDDIAPTDATEATRIVT 82 AY D QL ARL EPLR+ALAG+LKAGKSTL+NA VG DIAPTDATE TR+VT Sbjct 20 AYSDNPDARAQLAECAARLEEPLRVALAGSLKAGKSTLLNAFVGQDIAPTDATECTRVVT 79 Query 83 WFRHGPTPRVTANHRGGRRANVPITRRGG-LSFDLRRINPAELIDLEVEWPAEELIDATI 141 W+R G TP VTA + G ANV + R G L+FDL + + L+VEWPA L TI Sbjct 80 WYRSGTTPTVTARYDGDMSANVAVRRHEGRLTFDLGDLTADRVDRLDVEWPASALAQTTI 139 Query 142 VDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRTLNAADVALLKQIGGLVGGSVG 201 +DTPGTSSL+ D S RT R+L P + V DAVV+LLR+L+A+DV L +IG VGG G Sbjct 140 IDTPGTSSLSKDVSARTFRMLTPENAVSGADAVVYLLRSLSASDVQFLGRIGAHVGGESG 199 Query 202 ALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQMGICQAVVPVSGLLALTARTLR 261 LG++GV SRADE+GAGR DAM+SA +VA RFT EL G+CQAVVPV+GLLAL ARTLR Sbjct 200 PLGVVGVVSRADEVGAGRADAMMSAQEVAARFTDELELTGLCQAVVPVAGLLALGARTLR 259 Query 262 QTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDAGIRAQLLERFGMFGIRMSIAV 321 Q+EF A LA +L A+LS DRF R D+ LPVDA +R QL +RFG+FGIR++I + Sbjct 260 QSEFAAFEALARVPDADLQLAMLSADRFCRDDAALPVDAAMRRQLADRFGLFGIRLAIML 319 Query 322 LAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDMLKAHTALVSLRRFVQTHPVPAT 381 + GV DS GLAAEL+ RSGL LR VID QF QR++ LK H+ALV+L R + HP AT Sbjct 320 IRLGVNDSPGLAAELVARSGLDELRQVIDVQFGQRAEQLKTHSALVALERVLTAHPSGAT 379 Query 382 PYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIASLRRIIGGSGTSAAARLGLDP 441 ++ ++ LLAD H F+ELRML L S T L+ +++ L+R+IGG G A RLGL Sbjct 380 TRLLDEVGRLLADVHGFQELRMLGRLRSAETGLSAEDLTELQRLIGGFGIDPAQRLGLAA 439 Query 442 ANSREAPR-AALAAAQHWRRRAAHPLNDPFTTRACRAAVRSAEAMVAEF 489 S E R A L A + WR RAAHPL D FT RACR A RSAE ++A+ Sbjct 440 DASIEDGREAGLTAVRKWRERAAHPLVDQFTARACRVAARSAEGVLADL 488 >gi|226243454|dbj|BAH53802.1| hypothetical protein [Rhodococcus opacus B4] Length=498 Score = 488 bits (1255), Expect = 1e-135, Method: Compositional matrix adjust. Identities = 266/494 (54%), Positives = 335/494 (68%), Gaps = 14/494 (2%) Query 8 RAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNALVGD 67 RA++ + + Y G+P D+ QL RL +PLR+ALAG+LKAGKSTL+N+LVG Sbjct 10 RALIASARRLYAGSP------DIRDQLGGCARRLEQPLRVALAGSLKAGKSTLLNSLVGQ 63 Query 68 DIAPTDATEATRIVTWFRHGPTPRVTANHR------GGRRANVPITRRGG-LSFDLRRIN 120 DIAPTDATE TR+VTW+R G TP VTA ++ R ANVP+ RR G L+FDL + Sbjct 64 DIAPTDATECTRVVTWYRSGSTPTVTAWYQPEPGTGAQRSANVPVLRRDGHLTFDLGHLT 123 Query 121 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT 180 ++ L+VEWP+ L TI+DTPGTSSL+ D S RTL +L P + DAVV+LLRT Sbjct 124 ADQVDRLDVEWPSSALAHTTIIDTPGTSSLSRDVSARTLEMLTPDNEASGADAVVYLLRT 183 Query 181 LNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQM 240 LNA DV L QIG VG G LG++GV SRADE+GAGR+DAM+SA +VA RF EL + Sbjct 184 LNATDVQFLGQIGDHVGDESGPLGVVGVVSRADEVGAGRLDAMMSAKEVASRFAGELERT 243 Query 241 GICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDA 300 G+CQAVVPV+GLLAL ART+RQ EF A + LA +LN A+LS DRF R DSPLPVDA Sbjct 244 GLCQAVVPVAGLLALGARTMRQAEFAAFQHLAEVPVDDLNLAMLSADRFAREDSPLPVDA 303 Query 301 GIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDML 360 +RAQL +RFG+FGIRM++ ++ G DS LAAEL+ERSGL LR VID QF QR+D L Sbjct 304 RMRAQLADRFGLFGIRMAVTLIRLGTKDSPTLAAELVERSGLDELRQVIDIQFGQRADQL 363 Query 361 KAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIA 420 K H+ALV+L+R + HP+P ++ + LL+D H F+ELR+L L S L D++A Sbjct 364 KTHSALVALKRVLTAHPLPGASDILMSAERLLSDVHGFQELRLLGRLRSTEVGLPADDVA 423 Query 421 SLRRIIGGSGTSAAARLGLDPANSREAPRA-ALAAAQHWRRRAAHPLNDPFTTRACRAAV 479 L+R+IGG G RLG D +S E R ALAA + WR RA HPL D FT RAC A Sbjct 424 ELQRLIGGFGIEIPERLGTDGDDSVELQRMRALAAVRKWRERARHPLLDQFTARACTVAA 483 Query 480 RSAEAMVAEFSARR 493 RSAE ++ E + R Sbjct 484 RSAEGVLEELNTVR 497 >gi|226304835|ref|YP_002764793.1| hypothetical protein RER_13460 [Rhodococcus erythropolis PR4] gi|226183950|dbj|BAH32054.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=494 Score = 478 bits (1229), Expect = 1e-132, Method: Compositional matrix adjust. Identities = 265/480 (56%), Positives = 327/480 (69%), Gaps = 4/480 (0%) Query 12 HATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNALVGDDIAP 71 HA I R A + R QLD ARL EPLR+ALAG+LKAGKSTL+N+LVG DIAP Sbjct 14 HALIDQARRVYADQPR--TRAQLDECAARLGEPLRVALAGSLKAGKSTLLNSLVGQDIAP 71 Query 72 TDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGG-LSFDLRRINPAELIDLEVE 130 TDATE TR+VTW+R+G TP+VTA G NVP+TRR G L+FDL + ++V+ Sbjct 72 TDATECTRVVTWYRNGTTPQVTATAENGAEFNVPVTRRDGRLTFDLGEYTADSVDRIDVD 131 Query 131 WPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRTLNAADVALLK 190 WP+ L TI+DTPGTSSL+ + S RT +LVP G P DAVV+LLR LNA+D+ L Sbjct 132 WPSSALARTTIIDTPGTSSLSTEVSARTWDMLVPDGGAPGADAVVYLLRALNASDMQFLG 191 Query 191 QIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQMGICQAVVPVS 250 +I VGG G LG+IGV SRADE+GAGR+DA+ SA DVA RF EL + G+CQ+VVPV+ Sbjct 192 KIADHVGGESGPLGVIGVLSRADEVGAGRLDALSSAKDVAARFAEELERTGLCQSVVPVA 251 Query 251 GLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDAGIRAQLLERF 310 GLLAL ART+RQ+EF A LA +L+ ALLS DRF R+DSPLPVDA +RAQL +RF Sbjct 252 GLLALAARTMRQSEFAAFSALAQVSSEDLSLALLSADRFARQDSPLPVDAAMRAQLADRF 311 Query 311 GMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDMLKAHTALVSLR 370 G+FGIR+++ + G TDS LAAELLERSGL LR VID QF QR+D LK+HTALV+L Sbjct 312 GLFGIRLAVTSIKLGATDSPSLAAELLERSGLDELRQVIDVQFGQRADQLKSHTALVTLG 371 Query 371 RFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIASLRRIIGGSG 430 R ++ P + A+ LLAD H F ELR+L L S T L D++A L+R+IGG G Sbjct 372 RILEADPSEEGDLIAAEAQRLLADVHGFHELRLLGRLRSVHTDLPPDDLAQLQRLIGGYG 431 Query 431 TSAAARLGLDPANSREAPRAALAAAQHWRRRAA-HPLNDPFTTRACRAAVRSAEAMVAEF 489 A+ RLG +P S E RA AA R + HPL D FT+RAC A RSAE ++AE Sbjct 432 IRASDRLGCEPEESPEVQRARATAAVRRWRELSRHPLFDRFTSRACLVAARSAEGVLAEI 491 >gi|229493083|ref|ZP_04386878.1| isoniazid inductible protein IniC [Rhodococcus erythropolis SK121] gi|229320113|gb|EEN85939.1| isoniazid inductible protein IniC [Rhodococcus erythropolis SK121] Length=494 Score = 473 bits (1217), Expect = 4e-131, Method: Compositional matrix adjust. Identities = 263/480 (55%), Positives = 326/480 (68%), Gaps = 4/480 (0%) Query 12 HATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNALVGDDIAP 71 HA I R A Y + QL+ ARL EPLR+ALAG+LKAGKSTL+N+LVG DIAP Sbjct 14 HALIDHARRA--YADQPQTRAQLEECAARLDEPLRVALAGSLKAGKSTLLNSLVGQDIAP 71 Query 72 TDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGG-LSFDLRRINPAELIDLEVE 130 TDATE TR+VTW+R+G TP+VTA G NVP+TRR G L+FDL + ++V+ Sbjct 72 TDATECTRVVTWYRNGTTPQVTATAENGAEFNVPVTRRDGRLTFDLGEYTADSVDRIDVD 131 Query 131 WPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRTLNAADVALLK 190 WP+ L TI+DTPGTSSL+ + S RT +LVP P DAVV+LLR LNA+D+ L Sbjct 132 WPSSALARTTIIDTPGTSSLSTEVSARTWDMLVPDGEAPGADAVVYLLRALNASDMQFLG 191 Query 191 QIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQMGICQAVVPVS 250 +I VGG G LG+IGV SRADE+GAGR+DA+ SA DVA RF EL + G+CQ+VVPV+ Sbjct 192 KIADHVGGESGPLGVIGVLSRADEVGAGRLDALSSAKDVAARFAEELERTGLCQSVVPVA 251 Query 251 GLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDAGIRAQLLERF 310 GLLAL ART+RQ+EF A LA +L+ ALLS DRF R+DSPLPVDA +RAQL +RF Sbjct 252 GLLALAARTMRQSEFAAFSALAQVPAEDLSLALLSADRFARQDSPLPVDAAMRAQLADRF 311 Query 311 GMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDMLKAHTALVSLR 370 G+FGIR+++ + G TDS LAAELLERSGL LR VID QF QR+D LK+HTALV+L Sbjct 312 GLFGIRLAVTSIKLGATDSPSLAAELLERSGLDELRQVIDVQFGQRTDQLKSHTALVTLG 371 Query 371 RFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIASLRRIIGGSG 430 R ++ P + A+ LLAD H F ELR+L L S T L D++A L+R+IGG G Sbjct 372 RILEADPSEEGDQIAAEAQRLLADVHGFHELRLLGRLRSVHTDLPPDDLAQLQRLIGGYG 431 Query 431 TSAAARLGLDPANSREAPRAALAAAQHWRRRAA-HPLNDPFTTRACRAAVRSAEAMVAEF 489 A+ RLG +P S E RA AA R + HPL D FT+RAC A RSAE ++AE Sbjct 432 IRASDRLGCEPEESPEVQRARATAAVRRWRELSRHPLFDRFTSRACLVAARSAEGVLAEI 491 >gi|343928327|ref|ZP_08767778.1| hypothetical protein GOALK_114_00040 [Gordonia alkanivorans NBRC 16433] gi|343761735|dbj|GAA14704.1| hypothetical protein GOALK_114_00040 [Gordonia alkanivorans NBRC 16433] Length=510 Score = 429 bits (1103), Expect = 6e-118, Method: Compositional matrix adjust. Identities = 249/491 (51%), Positives = 316/491 (65%), Gaps = 12/491 (2%) Query 5 DRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNAL 64 DR RA+L A A P V +LD R+ +P+R+ALAG+LKAGKSTL+NAL Sbjct 5 DRARALLDAARGALADEP------HVQAELDLCEHRMYQPVRVALAGSLKAGKSTLLNAL 58 Query 65 VGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGG-LSFDLRRINPAE 123 VG DIAPTDATE TR+VTW+R G +P VTA+ GR +P+TR G L FD R+ Sbjct 59 VGQDIAPTDATECTRVVTWYRSGRSPSVTAHVDDGRAVPIPVTRVDGRLGFDFGRLTADR 118 Query 124 LIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPR----VDAVVFLLR 179 + L+VEWPA L TIVDTPGT+SL+ + S+ T+RLL P G R VDAVV+LLR Sbjct 119 VDHLDVEWPARALQSTTIVDTPGTASLSTELSDSTIRLLAPRAGEHRGQSGVDAVVYLLR 178 Query 180 TLNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQ 239 +L A D +L++IG +GGS G LG+IGV SRADE+GAGR+DAM+SA +A RF EL + Sbjct 179 SLTATDTGMLRRIGTAIGGSSGPLGVIGVVSRADELGAGRMDAMISAQQIAGRFAGELER 238 Query 240 MGICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVD 299 G+CQAVVPV+GLLAL ARTLR+ EF AL +LA EL ALL+VDRF R D + Sbjct 239 TGLCQAVVPVAGLLALAARTLREVEFRALAQLASTPGPELEAALLTVDRFARPDILPGIP 298 Query 300 AGIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDM 359 AG+R L ERFG+FGIR+++ ++ G T S LAAELL+RSGL L +ID QFAQR+D Sbjct 299 AGLRRSLAERFGVFGIRLAVTLIRFGATSSADLAAELLDRSGLPELSAIIDTQFAQRADE 358 Query 360 LKAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEI 419 LK+H+ALV+L + + + LAD H F ELR+L+ + L D+I Sbjct 359 LKSHSALVTLDHLLAASASTQAAQLRVSVRRELADVHGFRELRLLTSIRGGGLDLPADQI 418 Query 420 ASLRRIIGGSGTSAAARLGLDPANSREAPRA-ALAAAQHWRRRAAHPLNDPFTTRACRAA 478 A L R+IGGSG + RLG+ RA A+ AA+ WR A HPL P AC+ A Sbjct 419 ADLTRLIGGSGIDPSTRLGVPAGTDEPTIRASAIEAARTWRSLAGHPLITPAVASACQVA 478 Query 479 VRSAEAMVAEF 489 VRSAE +VA Sbjct 479 VRSAEGIVARL 489 >gi|54027384|ref|YP_121626.1| hypothetical protein nfa54100 [Nocardia farcinica IFM 10152] gi|54018892|dbj|BAD60262.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=512 Score = 412 bits (1058), Expect = 1e-112, Method: Compositional matrix adjust. Identities = 250/465 (54%), Positives = 310/465 (67%), Gaps = 19/465 (4%) Query 40 RLAEPLRIALAGTLKAGKSTLVNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGG 99 RL +PLR+ALAG+LKAGKSTL+N+LVG DIAPTDATE TR+VTW+R+G TP VTA G Sbjct 42 RLDQPLRVALAGSLKAGKSTLLNSLVGQDIAPTDATECTRVVTWYRNGTTPSVTAYAADG 101 Query 100 RRANVPITRRGG---LSFDLRRI-----NPAELIDLEVEWPAEELIDATIVDTPGTSSLA 151 ANV + R GG L+FDL + P E+ LEVEWPA L TI+DTPGTSSL+ Sbjct 102 ATANVVVRRGGGAHGLTFDLSGLAWNAPGPREVDHLEVEWPAAALASTTIIDTPGTSSLS 161 Query 152 CDASERTLRLLVP------AD--GVPRVDAVVFLLRTLNAADVALLKQIGGLVGGSVGAL 203 + S RT RLL P AD VP DAVV+LLR L+A D+ L+++G G+ G L Sbjct 162 REVSRRTARLLTPGADEGRADDLSVPGADAVVYLLRRLDATDIDFLERVGAGDRGAAGPL 221 Query 204 GIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQMGICQAVVPVSGLLALTARTLRQT 263 G++GV SRADEIGAGRIDA+ SA DVA RF EL + G+CQAV+PV+GLLA A TLRQ Sbjct 222 GVVGVVSRADEIGAGRIDALHSARDVAARFATELERTGLCQAVIPVAGLLAFAAATLRQQ 281 Query 264 EFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDAGIRAQLLERFGMFGIRMSIAVLA 323 EF A + LAG EL+ A+LS DRF R D LPV +RAQL ERFGMFGIRM++ ++ Sbjct 282 EFAAFQALAGIPVEELSAAMLSADRFARPDIALPVPPELRAQLAERFGMFGIRMAVTLIR 341 Query 324 AGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDMLKAHTALVSLRRFVQTHPVPATPY 383 GV DS LAAEL RSG+ LR V+D QFAQR+D LKAH+AL +L R + T+P Sbjct 342 LGVRDSASLAAELAARSGVDELRAVLDVQFAQRADQLKAHSALTALARVLATYPGTRADA 401 Query 384 VIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIASLRRIIGGSGTSAAARLGLDPAN 443 ++ + LLAD H F ELR+L L + L D++A L R+IGG+G + RLGL PA+ Sbjct 402 LLPRVRTLLADVHGFAELRLLGRLRTDELPLPPDDLAELHRLIGGAGVAPHLRLGL-PAD 460 Query 444 SREAPRAALAA--AQHWRRRAAHPLNDPFTTRACRAAVRSAEAMV 486 + A AA + WR RA HPL D T AC+ A RSAE ++ Sbjct 461 APAPVARARAAELVRKWRERARHPLADQLTRSACQIAARSAEGVL 505 >gi|333921736|ref|YP_004495317.1| hypothetical protein AS9A_4083 [Amycolicicoccus subflavus DQS3-9A1] gi|333483957|gb|AEF42517.1| hypothetical protein AS9A_4083 [Amycolicicoccus subflavus DQS3-9A1] Length=464 Score = 386 bits (991), Expect = 6e-105, Method: Compositional matrix adjust. Identities = 221/437 (51%), Positives = 294/437 (68%), Gaps = 8/437 (1%) Query 40 RLAEPLRIALAGTLKAGKSTLVNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHR-- 97 R +PLRIA +G+LKAGKSTL+NALVG++IAP DATE T++VTW+RH P TA H Sbjct 8 RTRQPLRIAFSGSLKAGKSTLLNALVGEEIAPADATECTKVVTWYRHSRVPVATAWHDDD 67 Query 98 GGRRAN-VPITRRGG-LSFDLRRINPAELIDLEVEWPAEELIDATIVDTPGTSSLACDAS 155 G R++ V + R GG L+F L + +++ +EV WP+E L ++DTPGTSSL+ D S Sbjct 68 GTHRSSPVVLDRSGGDLTFGLGSLCASQIDCIEVGWPSESLETTMLIDTPGTSSLSRDVS 127 Query 156 ERTLRLLVPADGVPRVDAVVFLLRTLNAADVALLKQIGGLVGGSVGALGIIGVASRADEI 215 ERTLRLL P G DAV++LLRTLN AD+ L++IG +GG+ G LG+IGV +RADE+ Sbjct 128 ERTLRLLTPEQGPSEADAVIYLLRTLNDADLRFLREIGDRLGGNAGPLGVIGVLARADEV 187 Query 216 GAGRIDAMLSANDVAKRFTRELNQMGICQAVVPVSGLLALTARTLRQTEFIALRKLAGAE 275 GAGR DA+ SA +A RF REL G+CQAVVPVSGL+AL ARTLR++EF AL +L+ E Sbjct 188 GAGRTDALASARTIADRFARELESTGLCQAVVPVSGLVALAARTLRESEFAALSQLSREE 247 Query 276 RTELNRALLSVDRFVRRDSP-LPVDAGIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAA 334 L+ ALLS DRFVR SP L V + RA L RFG+FGIR++I +L GV +T LA+ Sbjct 248 PANLDLALLSADRFVR--SPELTVSSETRAALAHRFGVFGIRVAIGLLREGVDTATELAS 305 Query 335 ELLERSGLVALRNVIDQQFAQRSDMLKAHTALVSLRRFVQTHPVPATPYVIADIDPLLAD 394 LL SG+ L ID QR++ LKAH ALVS++ + P+ + +++++ LAD Sbjct 306 ALLTVSGVSELTEAIDVHIRQRAEQLKAHAALVSVQDILVRAPMQGSTELLSEVQRWLAD 365 Query 395 THAFEELRMLSLLPSRATTLNDDEIASLRRIIGGSGTSAAARLGLDPANSREAPRA-ALA 453 H FEELR+L+ L ++ L+RI+GG+GT++ RLG +S EA R AL Sbjct 366 DHDFEELRVLARLRGVSSGSLAANARELQRILGGTGTASEVRLGAPAGSSPEAIRKLALD 425 Query 454 AAQHWRRRAAHPLNDPF 470 + + WR A HPLNDPF Sbjct 426 SVRRWRGLAQHPLNDPF 442 >gi|311742257|ref|ZP_07716067.1| isoniazid inducible protein IniC [Aeromicrobium marinum DSM 15272] gi|311314750|gb|EFQ84657.1| isoniazid inducible protein IniC [Aeromicrobium marinum DSM 15272] Length=499 Score = 382 bits (981), Expect = 8e-104, Method: Compositional matrix adjust. Identities = 217/488 (45%), Positives = 304/488 (63%), Gaps = 8/488 (1%) Query 5 DRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNAL 64 D RA+L +T++ YR PA + +L RL EPLRIAL G++KAGKSTL+NAL Sbjct 13 DTARALLASTMRLYRRDPA------ITAELQTYSRRLDEPLRIALVGSVKAGKSTLLNAL 66 Query 65 VGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGG-LSFDLRRINPAE 123 +G+ +APTDA E TR+VTW+RHG TP+V A G +P+ R+ L +L + + Sbjct 67 LGEHLAPTDARECTRVVTWYRHGNTPKVRAYPLDGGVTKLPLLRQADRLELELGDLRAED 126 Query 124 LIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRTLNA 183 L LEV WPAE+L D ++DTPGT+S++ D S RT L P DGV VDAVV++LR+L+ Sbjct 127 LERLEVTWPAEQLSDLILIDTPGTASISTDVSGRTQEFLAPRDGVSGVDAVVYMLRSLHT 186 Query 184 ADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQMGIC 243 +DV L ++ G ALG I V SRADE+G GR+DAM+S N +R + + G+ Sbjct 187 SDVEFLHELHDRTGHGASALGSIAVLSRADELGGGRLDAMVSVNRAVQRLRADPSLDGLV 246 Query 244 QAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDAGIR 303 ++VVPV+GLLA+ + TLRQ+EF A L R L + L+S DRF+ + A IR Sbjct 247 ESVVPVAGLLAVASSTLRQSEFSAFVTLEKLTRERLQQLLVSADRFIAAEEDDLPSAKIR 306 Query 304 AQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDMLKAH 363 AQL+ERFG++GIR++IA L G+ D+ L+AEL+ RSGL LR VID F QR+ LKAH Sbjct 307 AQLVERFGLYGIRLAIATLRTGIVDAPTLSAELVRRSGLDELRRVIDIHFRQRNPELKAH 366 Query 364 TALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIASLR 423 +A++++ R + HP ++ + LA++HAF E+R++S + S + D++ L Sbjct 367 SAILAVYRLLSAHPREDARPLLETAEEYLANSHAFREMRLISRVRSVKFAMAADDLEELT 426 Query 424 RIIGGSGTSAAARLGLDPANSREAPRA-ALAAAQHWRRRAAHPLNDPFTTRACRAAVRSA 482 R+IGG GT+A RLG DP + E A A A W A +PL D T ACR VRS Sbjct 427 RLIGGDGTAAHQRLGADPDSGLEQLDALAHEALWKWADLADNPLTDRDTAAACRVVVRSC 486 Query 483 EAMVAEFS 490 E ++A+ + Sbjct 487 EGVIADLA 494 >gi|331700297|ref|YP_004336536.1| GTP-binding protein HSR1-like protein [Pseudonocardia dioxanivorans CB1190] gi|326954986|gb|AEA28683.1| GTP-binding protein HSR1-related protein [Pseudonocardia dioxanivorans CB1190] Length=499 Score = 365 bits (938), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 220/492 (45%), Positives = 301/492 (62%), Gaps = 18/492 (3%) Query 7 VRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNALVG 66 VR +L T++AY +P + G + LDR EPLR+A+AG +KAGKSTL+NALVG Sbjct 16 VRLLLRHTMEAYSDSP--QALGWLRHHLDRFD----EPLRVAIAGKVKAGKSTLLNALVG 69 Query 67 DDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITR-RGGLSFDLRRINPAELI 125 ++IAPTDA E TR+VTW++ G +PRV + + I R RG LSFDL P + + Sbjct 70 EEIAPTDAGECTRVVTWYQDGHSPRVLMYPKAAAPKQLTIHRNRGSLSFDLMG-TPTDQV 128 Query 126 D-LEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRTLNAA 184 D L V+WP++ L T++DTPG +SL+ D S R L P D DAV++L+R L+A Sbjct 129 DRLVVDWPSQNLRSTTLIDTPGIASLSSDTSMRAGAFLTPDDAPTPADAVIYLMRHLHAT 188 Query 185 DVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQMGICQ 244 DV L+ + I V SRADEIG GR+DA+ SA +A+R+ + G+CQ Sbjct 189 DVRFLESFFDQGVARATPVNTIAVLSRADEIGVGRLDALTSARRIARRYRSDDKIRGLCQ 248 Query 245 AVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDS-----PLPVD 299 VV V+GLLA + RT+RQ EF AL LA R +++ LLSVDRFVR + P D Sbjct 249 TVVAVAGLLAQSGRTMRQDEFAALVALAELPRADMDSLLLSVDRFVRGEGVELAHP---D 305 Query 300 AGIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDM 359 RA+L+ERFG+FG+R+ + ++ G+TD T +A EL+ RSGL LR V+ QF +R D+ Sbjct 306 TDARARLIERFGLFGVRLGVTLVRQGITDPTRIAEELVRRSGLEDLRQVLSTQFTERRDL 365 Query 360 LKAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEI 419 LK+ +AL+++ +Q P PA + A+++ +LA H F ELRMLS L + A L D + Sbjct 366 LKSRSALLAVELVLQREPRPAATALAAEVERILAGAHEFVELRMLSALRAGAVKLPSDAL 425 Query 420 ASLRRIIGGSGTSAAARLGLDPA-NSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRAA 478 R++GG G SAAARLGLDP + + RAAL AA W+RRA PL+ T A R Sbjct 426 DEAERLLGGEGGSAAARLGLDPGIHPEDLRRAALEAATRWKRRAESPLSSRATADAARIV 485 Query 479 VRSAEAMVAEFS 490 VRS E M+A Sbjct 486 VRSCEGMLASLQ 497 >gi|325964548|ref|YP_004242454.1| GTP-binding conserved hypothetical protein TIGR00650 [Arthrobacter phenanthrenivorans Sphe3] gi|323470635|gb|ADX74320.1| GTP-binding conserved hypothetical protein TIGR00650 [Arthrobacter phenanthrenivorans Sphe3] Length=514 Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 206/488 (43%), Positives = 299/488 (62%), Gaps = 14/488 (2%) Query 10 ILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNALVGDDI 69 ++ A ++ YR PA L RL+EPLR+A+AG +KAGKSTL+NA++G++I Sbjct 12 LVRAALEVYRDDPA------ASAALQDYARRLSEPLRVAIAGMVKAGKSTLLNAIIGEEI 65 Query 70 APTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGG-LSFDLRRINPAELIDLE 128 APTD E TRIVTW+RHG TPR+T G N+P+ R G L F L + ++ L+ Sbjct 66 APTDTGECTRIVTWYRHGHTPRITLYPVEGEPRNLPLKRVDGRLVFVLGDVQAEDVQRLD 125 Query 129 VEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRTLNAADVAL 188 V+WPA L T++DTPG +SL+ D S R+ L PAD DA+++L+R ++A+D+ Sbjct 126 VQWPAPALQAMTLIDTPGIASLSGDVSARSTSFLAPADAPSEADAIIYLMRHMHASDLRF 185 Query 189 LKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQMGICQAVVP 248 L+ + G G + + V SRADE+GAGRID++LSA ++A+R+ R+ N + VVP Sbjct 186 LESFADTMAGRSGTVNALAVLSRADEVGAGRIDSLLSAGEIAERYRRDHNLRKLALGVVP 245 Query 249 VSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDAGIRAQLLE 308 V+GLLA +AR++RQ +F +LR LA +R R LLS DRF+R P + A RA LL+ Sbjct 246 VAGLLAQSARSMRQPDFDSLRLLAQLDRPVRERMLLSADRFLRATDPEGMTAKARASLLQ 305 Query 309 RFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDMLKAHTALVS 368 R+G+FGIR+++ ++ G + T LA EL RSGL L ++ +QF R+D LKA TALV+ Sbjct 306 RYGLFGIRLAVVLIRNGFDEPTPLAHELARRSGLDPLLEMLGRQFQARADALKARTALVA 365 Query 369 LRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIASLRRIIGG 428 + +++ P T + A ++ L + H F ELR+L+ L + LN + A R+IGG Sbjct 366 VDSLLRSSPREGTGDLAAALERLQVNAHEFRELRLLASLRTSGVALNPELAAEAERLIGG 425 Query 429 SGTSAAARLGLDPANSREA----PRAALAAAQHWRRRAAHPLNDPFTTRACRAAVRSAEA 484 G ++ RLGL+P + E R+ LA WR AA+PL D ACR +RS E Sbjct 426 WGAASHVRLGLEPEATPEQLSDEVRSNLA---RWRALAANPLTDRAALEACRVVIRSCEG 482 Query 485 MVAEFSAR 492 ++AE SAR Sbjct 483 ILAEASAR 490 >gi|226364947|ref|YP_002782729.1| hypothetical protein ROP_55370 [Rhodococcus opacus B4] gi|226243436|dbj|BAH53784.1| hypothetical protein [Rhodococcus opacus B4] Length=482 Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 221/485 (46%), Positives = 288/485 (60%), Gaps = 15/485 (3%) Query 6 RVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNALV 65 + R ++ A R PA + +L GARL EPLR+AL GTLKAGKSTL+NALV Sbjct 9 QTRQLIDAARHELRSDPATVE------ELRHCGARLEEPLRVALTGTLKAGKSTLLNALV 62 Query 66 GDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITR-RGGLSFDLRRINPAEL 124 G++IAPTDATE TR+VTWF TPR+ H GRR +P+ R G LS DL + + Sbjct 63 GEEIAPTDATECTRVVTWFEQSTTPRIDLTHDSGRRTRLPVHRDEGRLSLDLGAVTADRV 122 Query 125 IDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRTLNAA 184 L+V WP+ L + T+VDTPGTSS + D S RT LL+P DG VDAVV+L R + A Sbjct 123 ERLQVGWPSALLGEFTLVDTPGTSSNSRDVSARTRALLLPEDGPCDVDAVVYLTRGTDGA 182 Query 185 DVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQMGICQ 244 DV LL Q+ VG + G LGI+GV SRADE+ GR + +A A + + Sbjct 183 DVRLLDQLQTRVGTAAGPLGIVGVLSRADEVKGGRERTLDAARAAAD-----DAGRRVQR 237 Query 245 AVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDAGIRA 304 +++PVSGLLAL RTLRQTEF L LA + L AL S+ RF ++ L + G R Sbjct 238 SLLPVSGLLALRGRTLRQTEFDDLAVLATVPDSVLESALRSITRFGAENTDLVLSPGQRR 297 Query 305 QLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDMLKAHT 364 LL+ FG+FGIR ++ ++ AG TD+ LA EL SGL LR + QF QRS LKAH+ Sbjct 298 DLLDSFGLFGIRFAVVLIRAGATDAPVLARELTAHSGLEDLRRTLHLQFGQRSTELKAHS 357 Query 365 ALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIASLRR 424 AL +L+ + P A+ + D LLADTH F ELR+LS L S L D ++ L R Sbjct 358 ALRTLKAVLARTPSSASRTLSRAADRLLADTHVFRELRVLSGLRSSGLQLRDSDVVLLER 417 Query 425 IIGGSGTSAAARLGLDPANS--REAPRAALAAAQHWRRRAAHPLNDPFTTRACRAAVRSA 482 ++GG G S RLG+ PA++ + R AL A + WR +A P D T +AC A RS Sbjct 418 VLGGEGMSPHTRLGM-PADAAPEQISRVALTALRFWRSQAGRPTIDTATVQACACAARSC 476 Query 483 EAMVA 487 EA++A Sbjct 477 EALLA 481 >gi|220913824|ref|YP_002489133.1| hypothetical protein Achl_3083 [Arthrobacter chlorophenolicus A6] gi|219860702|gb|ACL41044.1| putative GTPase of unknown function [Arthrobacter chlorophenolicus A6] Length=496 Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 201/464 (44%), Positives = 282/464 (61%), Gaps = 10/464 (2%) Query 34 LDRIGARLAEPLRIALAGTLKAGKSTLVNALVGDDIAPTDATEATRIVTWFRHGPTPRVT 93 L G RLAEPLRIA+AG +KAGKSTL+NA++G++IAPTD E TRIVTW+R+G TPR+ Sbjct 30 LQGYGQRLAEPLRIAIAGMVKAGKSTLLNAIIGEEIAPTDTGECTRIVTWYRYGRTPRIM 89 Query 94 ANHRGGRRANVPITRRGG-LSFDLRRINPAELIDLEVEWPAEELIDATIVDTPGTSSLAC 152 + R G +PI R G L F L + + L+VEWP+ L T++DTPG +SL+ Sbjct 90 LHPRDGEPRPLPIKRVDGRLVFVLGDVRAEDAERLDVEWPSPMLRTMTLIDTPGIASLSE 149 Query 153 DASERTLRLLVPADGVPRVDAVVFLLRTLNAADVALLKQIGGLVGGSVGALGIIGVASRA 212 D S L PAD + DA+V+L+R ++A+D+ L+ G G + + V SRA Sbjct 150 DVSALATGFLTPADAPSQADAIVYLMRHMHASDLRFLESFKDTETGRSGTVNALAVLSRA 209 Query 213 DEIGAGRIDAMLSANDVAKRFTRELNQMGICQAVVPVSGLLALTARTLRQTEFIALRKLA 272 DE+GAGRID++LSA D+A+R+ R+ N + VVPV+GLLA TAR+LRQ +F +L+ LA Sbjct 210 DEVGAGRIDSLLSAGDIAERYRRDHNLRKLALGVVPVAGLLAQTARSLRQQDFASLQLLA 269 Query 273 GAERTELNRALLSVDRFVRRDSPLPVDAGIRAQLLERFGMFGIRMSIAVLAAGVTDSTGL 332 G +R + +LS DRF+R P + RA LL RFG+FGIR+++ ++ G + T L Sbjct 270 GLDRAAREKMMLSADRFLRGSEPERLTPEARASLLGRFGLFGIRLAVVLIRNGFNEPTPL 329 Query 333 AAELLERSGLVALRNVIDQQFAQRSDMLKAHTALVSLRRFVQTHPVPATPYVIADIDPLL 392 A EL RSGL L ++D+QF R+ LKA TALV + +++ P T + ++ L Sbjct 330 AHELARRSGLDPLLELLDRQFQARAGALKARTALVGVEALLRSSPRDGTEELAGSLERLQ 389 Query 393 ADTHAFEELRMLSLLPSRATTLNDDEIASLRRIIGGSGTSAAARLGLDPAN-----SREA 447 A+ H F ELR+L+ L + +L D A R++GG G + RLGL+ A S EA Sbjct 390 ANAHEFRELRLLATLRTTGVSLKPDAAADAERLVGGLGAATNVRLGLEAAATPDELSDEA 449 Query 448 PRAALAAAQHWRRRAAHPLNDPFTTRACRAAVRSAEAMVAEFSA 491 R L WR A +PL + ACR +RS E ++AE SA Sbjct 450 RRCLL----RWRALAENPLTERSAIDACRVVIRSCEGVLAESSA 489 >gi|111022435|ref|YP_705407.1| hypothetical protein RHA1_ro05469 [Rhodococcus jostii RHA1] gi|110821965|gb|ABG97249.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=482 Score = 342 bits (877), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 215/458 (47%), Positives = 277/458 (61%), Gaps = 9/458 (1%) Query 33 QLDRIGARLAEPLRIALAGTLKAGKSTLVNALVGDDIAPTDATEATRIVTWFRHGPTPRV 92 +L GARL E LR+AL GTLKAGKSTL+NALVG++IAPTDATE TR+VTWF TPR+ Sbjct 30 ELRHCGARLEESLRVALTGTLKAGKSTLLNALVGEEIAPTDATECTRVVTWFEQSATPRI 89 Query 93 TANHRGGRRANVPITR-RGGLSFDLRRINPAELIDLEVEWPAEELIDATIVDTPGTSSLA 151 H GRR +P+ R G LS DL + + L+V WP+ L + T+VDTPGTSS + Sbjct 90 DLTHDSGRRTRLPVHRDEGRLSLDLGTVTADRVERLQVGWPSALLGEFTLVDTPGTSSNS 149 Query 152 CDASERTLRLLVPADGVPRVDAVVFLLRTLNAADVALLKQIGGLVGGSVGALGIIGVASR 211 D S RT LL+P D VDAVV+L R +AADV LL ++ VG + G LGI+GV SR Sbjct 150 RDVSARTRALLLPEDRPCDVDAVVYLTRGTDAADVRLLDELQTRVGTAAGPLGIVGVLSR 209 Query 212 ADEIGAGRIDAMLSANDVAKRFTRELNQMGICQAVVPVSGLLALTARTLRQTEFIALRKL 271 ADE+ GR + +A A + ++++PVSGLLAL RTLRQTEF L L Sbjct 210 ADEVKGGRERTLDAARAAAD-----DAGRRVQRSLLPVSGLLALRGRTLRQTEFDDLAVL 264 Query 272 AGAERTELNRALLSVDRFVRRDSPLPVDAGIRAQLLERFGMFGIRMSIAVLAAGVTDSTG 331 A + L AL SV RF D+ L + R LL+ FG+FGIR ++ ++ AG TD+ Sbjct 265 AAVRDSALESALRSVGRFTAEDADLLLPPRQRRDLLDYFGLFGIRFAVRLIRAGATDAPT 324 Query 332 LAAELLERSGLVALRNVIDQQFAQRSDMLKAHTALVSLRRFVQTHPVPATPYVIADIDPL 391 LA EL SGL LR + QF QRS LKAH+AL SL+ + P A+ + D L Sbjct 325 LARELTAHSGLEDLRRTLHLQFGQRSTELKAHSALRSLKAVLARTPSSASRSLSRAADRL 384 Query 392 LADTHAFEELRMLSLLPSRATTLNDDEIASLRRIIGGSGTSAAARLGLDPANS--REAPR 449 LADTH F ELR+LS L + L D ++ L R++GG G S RLG+ PA++ + R Sbjct 385 LADTHVFRELRVLSGLRTSGLQLRDTDVVLLERVLGGEGMSPHTRLGM-PADAAPEQISR 443 Query 450 AALAAAQHWRRRAAHPLNDPFTTRACRAAVRSAEAMVA 487 AL A + WR +A P D T +AC A RS EA++A Sbjct 444 VALTALRFWRSQAGRPAIDTATVQACACAARSCEALLA 481 >gi|119963428|ref|YP_948977.1| hypothetical protein AAur_3280 [Arthrobacter aurescens TC1] gi|119950287|gb|ABM09198.1| putative GTPase of unknown function [Arthrobacter aurescens TC1] Length=491 Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 193/462 (42%), Positives = 282/462 (62%), Gaps = 2/462 (0%) Query 34 LDRIGARLAEPLRIALAGTLKAGKSTLVNALVGDDIAPTDATEATRIVTWFRHGPTPRVT 93 +D + RL PLRIA+AG +KAGKSTL+NA++G++IAPTDA E TRIVTW+R+G TPR+T Sbjct 30 VDELEGRLEGPLRIAVAGMVKAGKSTLLNAIIGEEIAPTDAGECTRIVTWYRYGHTPRIT 89 Query 94 ANHRGGRRANVPITRRGG-LSFDLRRINPAELIDLEVEWPAEELIDATIVDTPGTSSLAC 152 + G +P+TR G L F+L ++ ++ L V+WP L + T++DTPG +SL+ Sbjct 90 LHPIIGEPQALPVTREDGRLVFNLGQVRAEDVERLVVDWPTASLRELTLIDTPGIASLSH 149 Query 153 DASERTLRLLVPADGVPRVDAVVFLLRTLNAADVALLKQIGGLVGGSVGALGIIGVASRA 212 D S R+ L+P D DAV++L+R L+A+DV L+ G G + + V SRA Sbjct 150 DVSGRSTEFLLPEDAPMAADAVIYLMRHLHASDVRFLESFKDTAAGQSGTVNALAVLSRA 209 Query 213 DEIGAGRIDAMLSANDVAKRFTRELNQMGICQAVVPVSGLLALTARTLRQTEFIALRKLA 272 DEIGAGRID+++SA +A R++R+ N + VVPV+GLLA ++RT+RQ +F A++ LA Sbjct 210 DEIGAGRIDSLISAAVIADRYSRDQNLRPLALGVVPVAGLLAQSSRTMRQGDFEAMQLLA 269 Query 273 GAERTELNRALLSVDRFVRRDSPLPVDAGIRAQLLERFGMFGIRMSIAVLAAGVTDSTGL 332 +R + R +LS D FVR P + + L+ERFG+FGIR+ +A++ G+++ T L Sbjct 270 QMDRKQRERLMLSADLFVRATEPEGLGQAAKTSLVERFGLFGIRLGVALIRGGISNPTEL 329 Query 333 AAELLERSGLVALRNVIDQQFAQRSDMLKAHTALVSLRRFVQTHPVPATPYVIADIDPLL 392 A EL RSGL L + I F R+D LKA +V L ++ P + A+++ L Sbjct 330 AHELSRRSGLGQLLDNIAYLFQTRADALKARAVVVGLDALLRNSPRDVALLLEANLEKLQ 389 Query 393 ADTHAFEELRMLSLLPSRATTLNDDEIASLRRIIGGSGTSAAARLGLDPANSREA-PRAA 451 A H F EL++L+ L + ++L + A +++GG G++ RLGLDP S E AA Sbjct 390 AGAHEFRELKLLATLRTEGSSLTPELSAEAEQLVGGRGSTPPLRLGLDPGASPEQISEAA 449 Query 452 LAAAQHWRRRAAHPLNDPFTTRACRAAVRSAEAMVAEFSARR 493 WR A +PL +P ACR VRS E M+A A R Sbjct 450 RNGLNRWRLIAENPLTEPAALDACRVVVRSCEGMLAAIPAVR 491 >gi|336116031|ref|YP_004570797.1| hypothetical protein MLP_03800 [Microlunatus phosphovorus NM-1] gi|334683809|dbj|BAK33394.1| hypothetical protein MLP_03800 [Microlunatus phosphovorus NM-1] Length=504 Score = 319 bits (818), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 196/459 (43%), Positives = 284/459 (62%), Gaps = 10/459 (2%) Query 40 RLAEPLRIALAGTLKAGKSTLVNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGG 99 RL PLR+A+AG +KAGKSTL NA++G+++APTDA E T+IVTW+R G +P+VT G Sbjct 46 RLEGPLRLAIAGKVKAGKSTLFNAILGEELAPTDAGECTKIVTWYREGNSPQVTVYPLSG 105 Query 100 RRANVPITR-RGGLSFDLRRINPAELID-LEVEWPAEELIDATIVDTPGTSSLACDASER 157 P +R G L DL ++ PA +D +EV WP +L TI+DTPG +S++ D S R Sbjct 106 GAVPRPWSRDSGALDVDLGQL-PASAVDRIEVSWPTSKLRTLTILDTPGIASISADISAR 164 Query 158 TLRLLVPADGVPRV-DAVVFLLRTLNAADVALLKQIGGLVGGSVGALGIIGVASRADEIG 216 T R+L DG P V DAV++L+R +A+DV L+ + +GV SRADEIG Sbjct 165 TQRVLAAEDGRPPVADAVLYLMRHTHASDVRFLESFHDDELAHGTPMNSVGVLSRADEIG 224 Query 217 AGRIDAMLSANDVAKRFTRELNQMGICQAVVPVSGLLALTARTLRQTEFIALRKLAGAER 276 + R+DAM A+ +A+R+ + +C +VPV+GLLA A TLR+ E+ L LA +R Sbjct 225 SCRLDAMEVADRIARRYEADPRLRRLCPVIVPVNGLLAFAATTLREIEYAMLATLARGDR 284 Query 277 TELNRALLSVDRFVRRDSPLPVDAGIRAQLLERFGMFGIRMSIAVLAAG-VTDSTGLAAE 335 E+ + LL+ DRF+ R + +P+ R L++R G++GIR+S+ ++ AG VT + L++E Sbjct 285 GEVEQLLLTADRFLHRSTGVPLTEIEREHLMDRMGLYGIRLSVELIRAGFVTSAIELSSE 344 Query 336 LLERSGLVALRNVIDQQFAQRSDMLKAHTALVSLRRFVQTHPVPATPYVIADIDPLLADT 395 L++RSGL LR V+ +QF QRS +LKA ++L L ++ ++A ++ L A T Sbjct 345 LVDRSGLTRLRAVLTRQFEQRSRILKARSSLAVLTDVLRNGGCTDGDALLATVEHLSAST 404 Query 396 HAFEELRMLSLLPSRATTLNDDEIASLRRIIGGSGTSAAARLGLDPANSREAPR---AAL 452 H FEE+R+LS L S + + L R++GGSG + A RLGL A S AP AAL Sbjct 405 HEFEEVRLLSALRSGQIEVRPERAVELDRLLGGSGHAPAIRLGL--AESATAPEIRGAAL 462 Query 453 AAAQHWRRRAAHPLNDPFTTRACRAAVRSAEAMVAEFSA 491 ++ W+R A HPL+ A RAAVR+ E MVA S+ Sbjct 463 SSLASWQRLAEHPLSGRQVKMAARAAVRTLEGMVAAHSS 501 >gi|300787044|ref|YP_003767335.1| GTPase [Amycolatopsis mediterranei U32] gi|299796558|gb|ADJ46933.1| putative GTPase [Amycolatopsis mediterranei U32] gi|340528540|gb|AEK43745.1| GTPase [Amycolatopsis mediterranei S699] Length=490 Score = 293 bits (750), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 191/485 (40%), Positives = 283/485 (59%), Gaps = 15/485 (3%) Query 6 RVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNALV 65 +VR + Y G+PA QL +I RLAEPLR+A+AG +KAGKSTL+NALV Sbjct 7 QVRGFVARACAGYAGSPAE-------PQLRQIAGRLAEPLRVAIAGRVKAGKSTLLNALV 59 Query 66 GDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITR-RGGLSFDLRRINPAEL 124 G ++A TDA E TR+VTW+R+GPT R+ + G +P R G L +L + P ++ Sbjct 60 GQELAATDAGECTRVVTWYRNGPTYRIMLHPVRGMPRQLPFGRLSGTLGLEL-GMAPDDV 118 Query 125 IDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVP-ADGVPRVDAVVFLLRTLNA 183 L V+WP+ L T++DTPG S + S RT LVP DGV DAVV+L+R ++ Sbjct 119 ERLVVDWPSPALRAMTLIDTPGLGSARAEVSGRTEAALVPEGDGVGTADAVVYLMRHVHG 178 Query 184 ADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQMGIC 243 DV L + IGV ++ADE+G R DA+ SA +A R+ R+ G+C Sbjct 179 DDVRFLDAFHD-DPAQRRPVNTIGVLAKADEVGHARTDALDSAAKIAGRYARDSRVRGLC 237 Query 244 QAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDAGIR 303 Q VVPV+GLLA +A +L+++EF A R+LA A E+ R L S DRF ++ + V A R Sbjct 238 QTVVPVAGLLASSAASLKESEFRAFRRLAAAPEAEVARLLTSADRFA-GEAEVDVPAAER 296 Query 304 AQLLERFGMFGIRMSIAVLAAG-VTDSTGLAAELLERSGLVALRNVIDQQFAQRSDMLKA 362 A+LL+R+G+FG+R+++ ++ VT + L+ ELL RSGL LR+++ QFA R+D+LKA Sbjct 297 AELLDRYGLFGVRLALELVGGDLVTGARALSGELLARSGLHGLRSLLTTQFAARADVLKA 356 Query 363 HTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIASL 422 +AL ++ + ++ +P T ++ + + ++A H F E+R++ + A DE Sbjct 357 RSALQAVEQVLRAYP-DRTGGLLHEWERIVAGAHEFAEIRLIDAIRLGAVLFTTDEARDA 415 Query 423 RRIIGGSGTSAAARLGLDPANSREAPRAALAAA-QHWRRRAAHPLNDPFTTRACRAAVRS 481 R++G +G +RLGL R A R AL A W+RRA HP + A R VR+ Sbjct 416 ERLLGATGVDVPSRLGLPGDAGRTAIRQALGAQLLRWQRRAEHPASPRDVRDAARVLVRT 475 Query 482 AEAMV 486 E ++ Sbjct 476 CEGIL 480 >gi|145594199|ref|YP_001158496.1| HSR1-like GTP-binding protein [Salinispora tropica CNB-440] gi|145303536|gb|ABP54118.1| GTP-binding protein, HSR1-related [Salinispora tropica CNB-440] Length=501 Score = 292 bits (748), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 201/493 (41%), Positives = 274/493 (56%), Gaps = 15/493 (3%) Query 5 DRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNAL 64 DR RA L+ I YRG QL I RL EPLR+A+AG KAGKSTL+NAL Sbjct 11 DRTRAALNHAIGIYRGTADE-------SQLAAIRDRLDEPLRVAIAGRAKAGKSTLLNAL 63 Query 65 VGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRR-GGLSFDLRRINPAE 123 VG+ +APTD E TR+VTW+ G T RVTA+ + +R G + DL P E Sbjct 64 VGERLAPTDTGECTRVVTWYADGHTYRVTAHVADQPPVQLRFSRDDGAIEIDLAGRAPEE 123 Query 124 LIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPR----VDAVVFLLR 179 + L V WP++ L T+VDTPG SL S R+ LL ADG DAV++L+R Sbjct 124 IDHLTVIWPSQALRTTTLVDTPGIGSLTDRVSRRSWELLA-ADGTEEEAMPTDAVLYLMR 182 Query 180 TLNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQ 239 ++A+D+ LK + IGV SRADEIG GRID+M SA +A T + Sbjct 183 HVHASDMEFLKAFRDSEVSRPNPINAIGVLSRADEIGVGRIDSMASAQRIAAHLTMDPRM 242 Query 240 MGICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVD 299 + QAVVPV+GLLA TA TL + E LR++A ++ LLS DRF L + Sbjct 243 RRMVQAVVPVAGLLAETAATLTEAEMERLRRVAKLAPRDVEALLLSADRFRESMPELGLT 302 Query 300 AGIRAQLLERFGMFGIRMSIAVLAAGVTDSTG-LAAELLERSGLVALRNVIDQQFAQRSD 358 R LLERFG+FG+R++ AV+ + + LA EL RSGLV LR V+ F +R D Sbjct 303 LIERDVLLERFGLFGLRLAAAVIRQRIVRTAAELARELSARSGLVELRAVLGSLFFERRD 362 Query 359 MLKAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDE 418 +LK+ +AL+++ +T P P + + A+++ +LA H F ELR+L+ + + T Sbjct 363 VLKSRSALLAIDALTRTRPAPGSEAIAAEVEEILAGAHPFSELRVLTSVRAGWVTGKPAV 422 Query 419 IASLRRIIGGSGTSAAARLGLDP-ANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRA 477 I L R+IGG G + R+GL+P A+ +E A AA + W+ R P+ T A R Sbjct 423 IDDLERLIGGQGVAPHVRVGLEPDASPQELTSAVQAALERWQIRTESPMTSREMTIAGRI 482 Query 478 AVRSAEAMVAEFS 490 AVRS E M+A + Sbjct 483 AVRSCEGMLASLT 495 >gi|159037268|ref|YP_001536521.1| HSR1-like GTP-binding protein [Salinispora arenicola CNS-205] gi|157916103|gb|ABV97530.1| GTP-binding protein HSR1-related [Salinispora arenicola CNS-205] Length=501 Score = 290 bits (741), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 200/493 (41%), Positives = 272/493 (56%), Gaps = 15/493 (3%) Query 5 DRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNAL 64 DR RA L+ I YRG QL I RL EPLR+A+AG KAGKSTL+NAL Sbjct 11 DRTRAALNRAIGVYRGTADE-------PQLVAIRDRLDEPLRVAIAGRAKAGKSTLLNAL 63 Query 65 VGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRR-GGLSFDLRRINPAE 123 VG+ +APTD E TR+VTW+ G T RVTA+ + +R G + DL P E Sbjct 64 VGERLAPTDTGECTRVVTWYADGHTYRVTAHVADQPPVQLRFSRDDGAIEIDLAGRAPEE 123 Query 124 LIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPR----VDAVVFLLR 179 + L V WP++ L T+VDTPG SL S R+ LL ADG DAV++L+R Sbjct 124 IDHLTVIWPSQALRTTTLVDTPGIGSLTDRVSRRSWDLLA-ADGAEEEAMPTDAVLYLMR 182 Query 180 TLNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQ 239 ++A+D+ LK + IGV SRADEIG GRID+M SA +A T + Sbjct 183 HVHASDMEFLKAFRDSEVSRPNPINAIGVLSRADEIGVGRIDSMASAQRIASHLTMDPRM 242 Query 240 MGICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVD 299 + Q VVPV+GLLA TA TL + E LR++A ++ LLS DRF L + Sbjct 243 RRMVQTVVPVAGLLAETAATLTEAEMERLRRIAKLAPRDVEALLLSADRFRESMPELGLT 302 Query 300 AGIRAQLLERFGMFGIRMSIAVLAAGVTDSTG-LAAELLERSGLVALRNVIDQQFAQRSD 358 R LL RFG+FG+R++ A++ V + G LA EL ERSGLV LR V+ F +R D Sbjct 303 RIERDVLLARFGLFGLRLAAAIVRQRVVRTAGELARELSERSGLVELRAVLGSLFFERRD 362 Query 359 MLKAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDE 418 +LK+ +AL+++ +T P P + A+++ +LA H F ELR+L+ + + T Sbjct 363 VLKSRSALLAMDALTRTRPAPGSEATAAEVEEILAGAHPFSELRVLTSVRAGWVTGKPAV 422 Query 419 IASLRRIIGGSGTSAAARLGLDP-ANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRA 477 I L R+IGG G + R+GL+P A+ +E A AA + W+ R P+ A R Sbjct 423 IDDLERLIGGQGVAPHVRVGLEPDASPQELTSAVHAALERWQIRCESPMTSREMAIAGRI 482 Query 478 AVRSAEAMVAEFS 490 AVRS E M+A + Sbjct 483 AVRSCEGMLASLT 495 >gi|324997179|ref|ZP_08118291.1| hypothetical protein PseP1_00379 [Pseudonocardia sp. P1] Length=398 Score = 286 bits (731), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 175/403 (44%), Positives = 245/403 (61%), Gaps = 13/403 (3%) Query 4 SDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNA 63 +D+ R +L T+ Y +P + G + L+R EPLR+A+AG +KAGKSTL+NA Sbjct 5 TDQTRTLLRNTLDVYGDSP--QAAGWLRHHLERFD----EPLRVAIAGKVKAGKSTLLNA 58 Query 64 LVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPIT---RRGGLSFDLRRIN 120 LVG+ IA TDA E TRIVTW+ P V RGG P+T R G L DL+ Sbjct 59 LVGERIATTDAGECTRIVTWYADAAAPGVRMRPRGGG-PERPLTLSRRDGALRIDLQG-T 116 Query 121 PAELID-LEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLR 179 P E +D L V+WP++ L ++DTPG +SL+ D S R L P D DAVV+L+R Sbjct 117 PVENVDRLLVDWPSQHLRRTNLIDTPGIASLSSDTSARAGEFLTPEDAPSPADAVVYLMR 176 Query 180 TLNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQ 239 L+A DV L+ + I V SRADEIG GR+DA+ SA +A+R+ + Sbjct 177 HLHAGDVRFLEAFHDRGVARATPVNTIAVLSRADEIGVGRLDALTSARRIARRYRGDDKL 236 Query 240 MGICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVD 299 G+CQ VV V+GL+A TART+RQ EF+AL +LA R ++ LLS DRF R + P D Sbjct 237 RGLCQTVVAVAGLVAETARTMRQDEFVALSELAALPRADVEALLLSADRFGRTELDRP-D 295 Query 300 AGIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDM 359 + R +LLERFG+FG+R++ ++ GV D + LA +L+ RSGL LR V+D QF++R D+ Sbjct 296 SATRVRLLERFGLFGVRLASTLIRQGVKDPSALADDLVRRSGLDELRRVLDTQFSERRDL 355 Query 360 LKAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELR 402 LK+ +AL+++ + P PAT + A+++ +LA H F ELR Sbjct 356 LKSRSALLAVDLVLTREPRPATAALRAEVERILAGAHEFVELR 398 >gi|134096910|ref|YP_001102571.1| isoniazid inductible gene protein IniC [Saccharopolyspora erythraea NRRL 2338] gi|291006648|ref|ZP_06564621.1| isoniazid inductible gene protein IniC [Saccharopolyspora erythraea NRRL 2338] gi|133909533|emb|CAL99645.1| isoniazid inductible gene protein IniC [Saccharopolyspora erythraea NRRL 2338] Length=488 Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 168/484 (35%), Positives = 256/484 (53%), Gaps = 8/484 (1%) Query 8 RAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNALVGD 67 R + HA R YR L RL +PLRIA++G +K+GKSTL+NALVG+ Sbjct 4 RLLEHARALMVRAMTFYRDDTRTSTWLRGRMERLDQPLRIAVSGRVKSGKSTLINALVGE 63 Query 68 DIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPI-TRRGGLSFDLRRINPAELID 126 ++APTDA E T++ T++++GP P+V + G NVP+ + G DL+R P E+ Sbjct 64 ELAPTDAEERTQVSTFYQYGPEPKVLVHTPSGAVQNVPVPSLDTGTIRDLQRWRPDEVAR 123 Query 127 LEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRTLNAADV 186 L +E P+ L T+++TPG +S A + R+ A + DAV++L R + D+ Sbjct 124 LVIESPSPGLQAITLIETPGVASSAVQETGRS----ALAQILSEADAVLYLTRHPHQTDL 179 Query 187 ALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQMGICQAV 246 L+ + L + I SRADE G+G +DA+ +A +A+R+ + Q V Sbjct 180 QFLQSVHELQIARYAPINTIIAFSRADETGSGGVDALDAAERIAQRYRDDPTVRSFSQHV 239 Query 247 VPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDAGIRAQL 306 +PV GLL A T+ EF + LA +++L LLS DRF P V A +RA+L Sbjct 240 IPVVGLLGQAASTMTAEEFASFVGLARLSQSDLEALLLSADRFANSTVPESVPAAVRAKL 299 Query 307 LERFGMFGIRMSIAVLAAG-VTDSTGLAAELLERSGLVALRNVIDQQFAQRSDMLKAHTA 365 LERFG +GI ++ L G VTD GL LLE S L L+ + QF +R D L+A + Sbjct 300 LERFGRYGIARAMTCLRDGSVTDLKGLRTALLEDSRLNDLQEAVHLQFVERQDALRARSI 359 Query 366 LVSLRRFVQTHPVPATPYVIADIDPLLAD-THAFEELRMLSLLPSRATTLNDDEIASLRR 424 L+++ ++ +P P ++ + + L+ + H ++ELR+LS L S + R Sbjct 360 LLAVDMVLRANPRPGVQRLLGEFEHLMVNAAHEWDELRLLSSLASGQVRFPRSLQSEAHR 419 Query 425 IIGGSGTSAAARL-GLDPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRAAVRSAE 483 ++G G A +RL G D A + A A WR +A +PL+D A + VRS E Sbjct 420 MLGAYGHDARSRLGGDDNAMEADLADEAAATLARWREQAVNPLHDRAHREAVQTVVRSCE 479 Query 484 AMVA 487 ++A Sbjct 480 RLIA 483 >gi|158315597|ref|YP_001508105.1| HSR1-like GTP-binding protein [Frankia sp. EAN1pec] gi|158111002|gb|ABW13199.1| GTP-binding protein, HSR1-related [Frankia sp. EAN1pec] Length=527 Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 187/524 (36%), Positives = 252/524 (49%), Gaps = 42/524 (8%) Query 5 DRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNAL 64 ++VRA+L + AYRG PA L R+ PLR+A+AG +KAGKSTL+NAL Sbjct 11 EQVRALLSDAVDAYRGTPAE-------ALLRHELGRVDGPLRVAIAGRVKAGKSTLLNAL 63 Query 65 VGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRR-GGLSFDLRRINPAE 123 VG+ +A TDATE TR+VT + G A R G V + R G DL E Sbjct 64 VGEQVAATDATECTRVVTAYTEGEREAAWAYLREGSVVEVALRRTPGSTHVDLAGHGEGE 123 Query 124 LIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADG---------VPR---- 170 + L VE P+ L T++DTPG +SL+ + S T L+P G PR Sbjct 124 VEALRVELPSPRLRRLTLIDTPGIASLSEELSRHTESFLLPGSGWQAGRPPGRAPRGPSA 183 Query 171 ----------------VDAVVFLLRTLNAADVALLKQIGGLVGGSVGALGIIGVASRADE 214 DAV++LLR L+A+DV L+ G IGV SRADE Sbjct 184 PAEAAGDAAAGGIGVGADAVLYLLRFLHASDVGFLESFRRTGVGEATPAHAIGVLSRADE 243 Query 215 IGAGRIDAMLSANDVAKRFTRELNQMGICQAVVPVSGLLALTARTLRQTEFIALRKLAGA 274 + GR +++ A A R+ + Q VVPV+GLLA L E LA Sbjct 244 VAPGRTESVDLARRAAADIGRDDRVRALVQTVVPVAGLLAQAGSRLTTDELAQFLVLAAE 303 Query 275 ERTELNRALLSVDRFVRRDSPLPVDAGIRAQLLERFGMFGIRMSIAVLAAG-VTDSTGLA 333 + LLS DRF + V A +RA LL+R G+ G+R+++A++ G D GLA Sbjct 304 PAEVADELLLSADRFAFPAAATGVPAPLRALLLDRLGLAGVRLAVALVRLGEARDPAGLA 363 Query 334 AELLERSGLVALRNVIDQQFAQRSDMLKAHTALVSLRRFVQTHPVPATPYVIADIDPLLA 393 AEL RSGL LR ++ QF R+D+LKA AL L + P + + A + L A Sbjct 364 AELAARSGLPELRALLRDQFTDRADVLKAQHALGVLDDVLDEFPHRSVAALRARRERLEA 423 Query 394 DTHAFEELRMLSLLPS---RATTLNDDEIASLRRIIGGSGTSAAARLGLDP-ANSREAPR 449 HA ELR+L L + +L +D + R++G T A ARLGL P A E Sbjct 424 GAHALAELRLLGDLRTGVADVASLGEDRRREMERLLGTDSTGAHARLGLPPGAGPDEVRA 483 Query 450 AALAAAQHWRRRAAHPLNDPFTTRACRAAVRSAEAMVAEFSARR 493 AAL A +RR + + L RA RS E ++ S R Sbjct 484 AALEALDTYRRLSENRLAARPIRRAATVVRRSCEGLLRTTSQTR 527 >gi|256374708|ref|YP_003098368.1| hypothetical protein Amir_0555 [Actinosynnema mirum DSM 43827] gi|255919011|gb|ACU34522.1| hypothetical protein Amir_0555 [Actinosynnema mirum DSM 43827] Length=478 Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 171/491 (35%), Positives = 242/491 (50%), Gaps = 38/491 (7%) Query 1 VSTSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL 60 V RV A+L + YR +P R + + R AR AEP+R+A+AG GKSTL Sbjct 17 VGLEARVGALLDEALALYRDSP----RAVSWLRGHR--ARFAEPVRVAVAGGHGTGKSTL 70 Query 61 VNALVGDDI-APTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSFDLRRI 119 V+ALVG+++ AP AT W+R G P VP+ RR D R+ Sbjct 71 VSALVGEELTAPPTAT------AWYRDGARPAAWVGAH-----EVPVVRRD----DGVRV 115 Query 120 NPAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLR 179 + VEWPA L D +VDT + + E DAV+ L R Sbjct 116 EAGGAERVVVEWPARSLRDLVLVDTRPDAPVELVFGE--------------ADAVLHLTR 161 Query 180 TLNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQ 239 + D+ L+ + + V +RADEIG GRIDA+ SA +A+R R+ Sbjct 162 HVRDEDLERLRAGHDHPIARAAPVTTLLVLARADEIGGGRIDALSSAKQIARRCRRDPAV 221 Query 240 MGICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVD 299 G+CQ V +GLLA+ +RTLR EF AL L+G R EL+ LLS DRF D P+ + Sbjct 222 RGLCQDAVAFAGLLAVASRTLRDEEFAALGALSGLARAELDGHLLSADRFAGEDFPVALG 281 Query 300 AGIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDM 359 A R +LL+R G+FG+R+ ++ G L +L +RSGL LR I +R Sbjct 282 ASARQRLLDRLGLFGVRLCTTLIRQGFDTRVKLTGQLAQRSGLGELREAIGAHLTERRGA 341 Query 360 LKAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEI 419 LKA +AL+ L ++ P P + ++ ++ ++A H F ELR+L+ L +L + Sbjct 342 LKARSALLGLDVVLRAEPRPGSVGLLGALERVVAGAHDFRELRLLAALAGGRVSLPGELG 401 Query 420 ASLRRIIGGSGTSAAARLGLDPA--NSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRA 477 R++GG+GT AAARLG + + RE L WR AA P+ D RA Sbjct 402 EEATRLVGGAGTGAAARLGAEEQGLSGRELRHLLLDVLGRWREHAASPVLDNAQRRAAGV 461 Query 478 AVRSAEAMVAE 488 VRS E ++ E Sbjct 462 VVRSCEGVLVE 472 >gi|300783415|ref|YP_003763706.1| GTPase [Amycolatopsis mediterranei U32] gi|299792929|gb|ADJ43304.1| putative GTPase [Amycolatopsis mediterranei U32] gi|340524801|gb|AEK40006.1| GTPase [Amycolatopsis mediterranei S699] Length=400 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 128/363 (36%), Positives = 185/363 (51%), Gaps = 22/363 (6%) Query 130 EWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRTLNAADVALL 189 E+P L D ++D PG PAD VP DA V L+R L ++A Sbjct 58 EYPTRALRDLVLLDDPG-----------------PADDVP--DATVRLVRHLEPDELAAA 98 Query 190 KQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQMGICQAVVPV 249 G A+ + V SRADE+GAGRIDA+L+A +A+R RE V+ V Sbjct 99 HPPAGSAFARQSAVNSVLVLSRADEVGAGRIDALLTAKQLARRAWREDPLCTGFLGVIAV 158 Query 250 SGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDAGIRAQLLER 309 +G LA R+LR EF L A R EL R +LSVD F P P+ R L+ R Sbjct 159 AGQLAYGGRSLRDDEFDLLAAFAAVPREELERHVLSVDSFTDPAFPGPIPVETRRSLVVR 218 Query 310 FGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDMLKAHTALVSL 369 FGMFG+R+++ ++ G D L+AEL+ RSGL LR+ + F R++ L+A TA++ L Sbjct 219 FGMFGVRLALTLIRTGCDDRVKLSAELVRRSGLGELRDTLAGCFVARAEALRARTAIIRL 278 Query 370 RRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIASLRRIIGGS 429 + HP P +++ ++ A H F ELR+++ + T L+ + R++G Sbjct 279 EALLAAHPRPGGDRLVSRVERFAAAAHDFRELRLIADIRGGRTALSGEPAEEAVRLLGAQ 338 Query 430 GTSAAARLGLDP-ANSREAPRAALAAAQHWRRRAAHPLNDPFTTR-ACRAAVRSAEAMVA 487 GT+ A RL L+P A+ E A L A + WR A P + P R A VRS E +++ Sbjct 339 GTTPADRLALEPDADPDEIYDAGLDALRRWRHEAERP-DRPHAERAAAHVVVRSTEGLLS 397 Query 488 EFS 490 F+ Sbjct 398 LFA 400 >gi|257057626|ref|YP_003135458.1| hypothetical protein Svir_36810 [Saccharomonospora viridis DSM 43017] gi|256587498|gb|ACU98631.1| hypothetical protein Svir_36810 [Saccharomonospora viridis DSM 43017] Length=420 Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 153/491 (32%), Positives = 230/491 (47%), Gaps = 77/491 (15%) Query 1 VSTSDRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTL 60 ++ +DR ++L Q Y +P L R AR+ EPLR+A+AG GK+TL Sbjct 1 MNLADRAWSLLTRAQQVYADSPRATN------WLRRHLARMEEPLRVAVAGAPGTGKTTL 54 Query 61 VNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSFDLRRIN 120 V+ALVG+ T ++W H P +V Sbjct 55 VSALVGE----VGEGRRTSPMSWH-HVPGDQV---------------------------- 81 Query 121 PAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRT 180 WP ++D + GT+ +A L+ A+ DAV++L Sbjct 82 ----------WPELLVLDTSQAQQDGTARVAD---------LICAEA----DAVLYLAGH 118 Query 181 LNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQM 240 + AD+ LL+ + + + V +RADE+G GR+DA++SA VA+R+ R Sbjct 119 PHDADLTLLRAAQDRAVSHIAPVNALMVLARADELGGGRVDALISARQVARRWARNPVTT 178 Query 241 GICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDA 300 CQ VV VSGL A ART+R+ EF L LA R+EL+ LLS DRF Sbjct 179 EACQDVVAVSGLTARAARTIREDEFELLAALAAVPRSELDPLLLSADRFGGDPE------ 232 Query 301 GIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDML 360 RA+LL+RFG+FG+R++ +L G L+AEL RSGL AL + FA+R+ +L Sbjct 233 --RARLLDRFGLFGVRLATTLLRGGADTPRALSAELCRRSGLDALGEAVTVYFAERAAVL 290 Query 361 KAHTALVSLRRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIA 420 KA +AL+ L ++ P P+ ++A+ + L H F ELR+ + L + +L + Sbjct 291 KARSALLGLGVVLRREPRPSAASLVAEWERTLTGAHEFAELRLFAALRTGRVSLPGELAD 350 Query 421 SLRRIIGGSGTSAAARLGLDPANSREAP---RAALAAAQHWRRRAAHPLNDPFTTRACRA 477 R+IGG G + RLG+ R P + A+ + WR +P+ A Sbjct 351 EAIRLIGGYGVAPQVRLGV----GRGEPGLRQVAVNVLRLWRSYMENPVLGSAERHAAAT 406 Query 478 AVRSAEAMVAE 488 VR+ EA+V E Sbjct 407 VVRTCEALVTE 417 >gi|254426080|ref|ZP_05039797.1| GTPase, putative [Synechococcus sp. PCC 7335] gi|196188503|gb|EDX83468.1| GTPase, putative [Synechococcus sp. PCC 7335] Length=522 Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 136/483 (29%), Positives = 226/483 (47%), Gaps = 30/483 (6%) Query 5 DRVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNAL 64 DR +A+ ++ R + + ++ +L RL+EP+R+A+ G +KAGKST++NAL Sbjct 8 DRAQALFDFILEKTRDRASLQ---ELHQELLNCQQRLSEPMRVAIVGKIKAGKSTMLNAL 64 Query 65 VGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRRGGLSF--DLRRINPA 122 +G++I T EAT + W ++GP + +++ G+ + L+ D + Sbjct 65 LGEEIVATGTVEATFNINWLKYGPHHTLKVHYKNGKSEDKSFEDLQTLTQRADEHQDYLL 124 Query 123 ELIDLEVEWPAEELIDATIVDTPGTSSLACDASERT----------LRLLVPADGVPRVD 172 + +EV +P L ++DTPG S D S+ T L L A+ + D Sbjct 125 SIKYIEVFYPNPILKTFHLIDTPGLDSFYKDDSQNTRDFLNLRGQELTALTQAEA-DKAD 183 Query 173 AVVFLL-RTLNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAK 231 AV++L +A D A++++ G G + IGV +R D + ++ +A Sbjct 184 AVLYLFSHNFSAGDQAVMEEFQGPSVGRATPINSIGVLTRIDTYWPEF--SPENSQQIAT 241 Query 232 RFTRELNQMGICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVR 291 R + + A+ P SG LAL A+TLR +EF L+KLA L L S RF Sbjct 242 RLSNIPQVRSLLYAIKPASGYLALGAKTLRDSEFETLQKLAALPEKSLQSLLRSKARFEN 301 Query 292 RDSPLPVD---AGIRAQLLERFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNV 348 + P ++ R ++L R +GI + ++ +G D L+ EL++ SG+ L + Sbjct 302 KAFPDQLEMPTVSERQKVLHRLERYGIWQACQLIRSGTYDLESLSQELMQASGVSDLSEL 361 Query 349 IDQQFAQRSDMLKAHTALVSLRR--FVQTHP-----VPATPYVIADIDPLLADTHAFEEL 401 I F R+ ++K TA+ L+ F Q + V ++ L A++H F EL Sbjct 362 ITSHFGHRAYLIKLRTAIDRLQALCFQQKQKQSGDDLQVVEAVAGKVEALEANSHDFREL 421 Query 402 RMLSLLPSRATTLNDDEIASLRRIIGGSGTSAAARLGL-DPANSREAPRAALAAAQHWRR 460 +L R +D EI L + G G + RLG+ + A+ + AA Q WR Sbjct 422 DVLRSYYDRKLEFSDSEIHQLLEVTGEYGPACFQRLGMKEQASIDQLLSAAKERMQKWRL 481 Query 461 RAA 463 RAA Sbjct 482 RAA 484 >gi|291006115|ref|ZP_06564088.1| hypothetical protein SeryN2_16473 [Saccharopolyspora erythraea NRRL 2338] Length=585 Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 156/494 (32%), Positives = 240/494 (49%), Gaps = 39/494 (7%) Query 6 RVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNALV 65 RVRA++ ++ Y A + +L + RL +PLR+A+AG + GK+TLVNALV Sbjct 121 RVRALVTTALERYGSGEAAGR------ELAEVAGRLGDPLRVAVAGNHRCGKTTLVNALV 174 Query 66 GDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRR---GGLSFDLRRINPA 122 G ++A T R+VT+FR G P VT + G +P G+S + Sbjct 175 GRNLAEEGPT---RVVTFFRGGTRPGVTVHPAEGEPHRLPTANAIAPAGMS--------S 223 Query 123 ELID-LEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRTL 181 E +D LEVE P L T++D P S DA+ R LL A D V+ L L Sbjct 224 EQVDHLEVESPTSALRGLTLIDLPPLDSAEPDAAGRARALLTSAGST---DVVLLLADEL 280 Query 182 NAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQMG 241 + LL++I +L ++ V +RAD G DAM +A + + Sbjct 281 GSDHPDLLERI------REHSLVVV-VIARADRFGGAGGDAMRAARATVAEYLLDPRLRR 333 Query 242 ICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDAG 301 CQA++PV+GLLA + TLR+ E+ + +L+ E+ L S + F R ++P G Sbjct 334 ACQAILPVAGLLAASGATLREPEYQSFHRLSLLGEAEVADLLRSPEHFGRAETPRAPGPG 393 Query 302 IRAQLLERFGMFGIRMSIAVLAAGVTDSTG-LAAELLERSGLVALRNVIDQQFAQRSDML 360 RA LL RFG+FG+R++ ++ G +S L+A L+ SG+ +R+++ +F + +D+ Sbjct 394 ERAALLRRFGIFGVRLAAGLVRDGEAESCAELSAALVRESGIEPVRDLLGSRFVELTDVR 453 Query 361 KAHTALVSLRRFVQTHPVPATPYVIA---DIDPLLADTHAFEELRMLSLLPSRATTLNDD 417 +A AL + + P P+ A ++D + H F E+ ++ L A L + Sbjct 454 RARAALRVVEEVLHGI-APDDPHRQALAYELDRIRGGAHEFVEVDVIDTLRGVAAPLREQ 512 Query 418 EIASLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQ--HWRRRAAHPLNDPFTTRAC 475 E R++G SGT RL L A + E R +AA Q WR RA +P C Sbjct 513 ERVMAERLLGASGTDPHVRLALPAAAAPEEVR-RVAAQQLAWWRERAENPTATRDVREVC 571 Query 476 RAAVRSAEAMVAEF 489 A VRS E M+ + Sbjct 572 LAVVRSCEGMLGAW 585 >gi|134099850|ref|YP_001105511.1| hypothetical protein SACE_3311 [Saccharopolyspora erythraea NRRL 2338] gi|133912473|emb|CAM02586.1| hypothetical protein SACE_3311 [Saccharopolyspora erythraea NRRL 2338] Length=925 Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 155/494 (32%), Positives = 240/494 (49%), Gaps = 39/494 (7%) Query 6 RVRAILHATIQAYRGAPAYRQRGDVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNALV 65 RVRA++ ++ Y A + +L + RL +PLR+A+AG + GK+TLVNALV Sbjct 461 RVRALVTTALERYGSGEAAGR------ELAEVAGRLGDPLRVAVAGNHRCGKTTLVNALV 514 Query 66 GDDIAPTDATEATRIVTWFRHGPTPRVTANHRGGRRANVPITRR---GGLSFDLRRINPA 122 G ++A T R+VT+FR G P VT + G +P G+S + Sbjct 515 GRNLAEEGPT---RVVTFFRGGTRPGVTVHPAEGEPHRLPTANAIAPAGMS--------S 563 Query 123 ELID-LEVEWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRTL 181 E +D LEVE P L T++D P S DA+ R LL A D V+ L L Sbjct 564 EQVDHLEVESPTSALRGLTLIDLPPLDSAEPDAAGRARALLTSAGST---DVVLLLADEL 620 Query 182 NAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQMG 241 + LL++I +L ++ V +RAD G DAM +A + + Sbjct 621 GSDHPDLLERI------REHSLVVV-VIARADRFGGAGGDAMRAARATVAEYLLDPRLRR 673 Query 242 ICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDAG 301 CQA++PV+GLLA + TLR+ E+ + +L+ E+ L S + F R ++P G Sbjct 674 ACQAILPVAGLLAASGATLREPEYQSFHRLSLLGEAEVADLLRSPEHFGRAETPRAPGPG 733 Query 302 IRAQLLERFGMFGIRMSIAVLAAGVTDSTG-LAAELLERSGLVALRNVIDQQFAQRSDML 360 RA LL RFG+FG+R++ ++ G +S L+A L+ SG+ +R+++ +F + +D+ Sbjct 734 ERAALLRRFGIFGVRLAAGLVRDGEAESCAELSAALVRESGIEPVRDLLGSRFVELTDVR 793 Query 361 KAHTALVSLRRFVQTHPVPATPY---VIADIDPLLADTHAFEELRMLSLLPSRATTLNDD 417 +A AL + + P P+ + ++D + H F E+ ++ L A L + Sbjct 794 RARAALRVVEEVLHG-IAPDDPHRQALAYELDRIRGGAHEFVEVDVIDTLRGVAAPLREQ 852 Query 418 EIASLRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQ--HWRRRAAHPLNDPFTTRAC 475 E R++G SGT RL L A + E R +AA Q WR RA +P C Sbjct 853 ERVMAERLLGASGTDPHVRLALPAAAAPEEVR-RVAAQQLAWWRERAENPTATRDVREVC 911 Query 476 RAAVRSAEAMVAEF 489 A VRS E M+ + Sbjct 912 LAVVRSCEGMLGAW 925 >gi|302524783|ref|ZP_07277125.1| predicted protein [Streptomyces sp. AA4] gi|302433678|gb|EFL05494.1| predicted protein [Streptomyces sp. AA4] Length=403 Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 127/361 (36%), Positives = 175/361 (49%), Gaps = 21/361 (5%) Query 130 EWPAEELIDATIVDTPGTSSLACDASERTLRLLVPADGVPRVDAVVFLLRTLNAADVALL 189 +WP L D +D P S+L DA V LLR L +A L Sbjct 62 DWPTRALRDLEFLDAPHPSTL--------------------TDASVQLLRHLEPDHLATL 101 Query 190 KQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQMGICQAVVPV 249 + A+ I V +RADE GAGRIDA+L+A +A+R RE Q V+ V Sbjct 102 RPTAPSAFARQTAVDTILVLARADETGAGRIDALLTAKQIARRAWREDPLCSGFQGVIAV 161 Query 250 SGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDAGIRAQLLER 309 + LA AR EF L A R EL R LLSVD F P PV R L+ R Sbjct 162 AAQLAYGARAFTDDEFELLAAFAAVPREELERYLLSVDTFTDPAFPGPVSVETRRSLVVR 221 Query 310 FGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDMLKAHTALVSL 369 FG+FG+++++ ++ G D L+AEL+ RSGL LR+ I FA R+D L+A TAL+ L Sbjct 222 FGLFGVKLALTLIRTGCDDRVKLSAELVRRSGLGELRDTIAGCFAARADALRARTALIRL 281 Query 370 RRFVQTHPVPATPYVIADIDPLLADTHAFEELRMLSLLPSRATTLNDDEIASLRRIIGGS 429 + P P + + A ++ A H F ELR+++ + T L + R++G Sbjct 282 ETVLNAEPRPHSDRLAARVERFSASAHDFRELRLIADIRGGRTALAGESAEEAVRLLGAE 341 Query 430 GTSAAARLGL-DPANSREAPRAALAAAQHWRRRAAHPLNDPFTTRACRAAVRSAEAMVAE 488 GT++ RLGL + + RE A L A WR A P A + VRSAE ++A+ Sbjct 342 GTASEERLGLAEGTDPREMYEAGLDAVMRWRHEAERPDRALADRAAAQVVVRSAEGLLAQ 401 Query 489 F 489 F Sbjct 402 F 402 >gi|288917779|ref|ZP_06412141.1| hypothetical protein FrEUN1fDRAFT_1836 [Frankia sp. EUN1f] gi|288350835|gb|EFC85050.1| hypothetical protein FrEUN1fDRAFT_1836 [Frankia sp. EUN1f] Length=570 Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 170/520 (33%), Positives = 230/520 (45%), Gaps = 75/520 (14%) Query 40 RLAEPLRIALAGTLKAGKSTLVNALVGDDIAPTDATEATRIVTWFRHGPTPRVTANHRGG 99 R PLR+ALAG +KAGKSTL+NAL G+ IA TDATE TRIVT + G A R G Sbjct 46 RFDGPLRVALAGRVKAGKSTLLNALAGEQIAATDATECTRIVTSYAAGTREAAWAYLRDG 105 Query 100 RRANVPITRRGGLSF-DLRRINPA-----------------ELIDLEVEWPAEELIDATI 141 + R G + DL + A + L VE P+ L T+ Sbjct 106 SVVEARLRRTAGSAHVDLAGLPGAGSTGTGAPGAGAPGPGPGVEALRVELPSPRLHGLTL 165 Query 142 VDTPGTSSLACDASERTLRLLV---------------PADGVPR---------------- 170 +DTPG +SL+ + S RT L P D VP Sbjct 166 IDTPGIASLSVELSRRTESFLTRGARQTPTRRPGGRSPGD-VPSGTGTSGLGPAGPALAG 224 Query 171 VDAVVFLLRTLNAADVALLKQIGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVA 230 DA+++LLR L+AADV L G IGV SRADEI GR +++ A A Sbjct 225 ADAIIYLLRHLHAADVDFLASFRRTGLGEATPAHAIGVLSRADEIAPGRTESVDVARRAA 284 Query 231 KRFTRELNQMGICQAVVPVSGLLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFV 290 R+ + Q VVPV+GLLA L E L LA + + LLSVDRFV Sbjct 285 AAIGRDERVRALVQTVVPVAGLLAQAGTRLSGDELGQLLALAAEPAADTDDLLLSVDRFV 344 Query 291 RRDSPLPVDAGIRAQLLERFGMFGIRMSIAVLAAGVT-DSTGLAAELLERSGLVALRNVI 349 + V A +R L++R G+ G+R+++A+ G D GLA EL RSGL L ++ Sbjct 345 APAASTSVAAPLRTLLVDRLGLAGVRLAVALARLGYARDPAGLATELTARSGLPELTALL 404 Query 350 DQQFAQRSDMLKAHTALVSLRRFVQTHPVPATPYVIADID------------------PL 391 QF R+D+LKA AL L + +D + Sbjct 405 RGQFTDRADVLKAQHALRVLDGVLGEGATGEATGAATGVDGPVGPPPRLLALLRARREQI 464 Query 392 LADTHAFEELRMLSLLPSRATT---LNDDEIASLRRIIGGSGTSAAARLGLDPANSREAP 448 A H ELR++ L + L+ + + R++G +G RLGL PA++ A Sbjct 465 EAGAHELAELRLIGELRTGTADLRGLDGERRDEMERLLGAAGVDVRTRLGL-PADAAAAE 523 Query 449 --RAALAAAQHWRRRAAHPLNDPFTTRACRAAVRSAEAMV 486 A LAA +RR A + L T RA R+ E ++ Sbjct 524 IRPAVLAALHRYRRLAENRLLPQPTRRAATVLRRTCEGLL 563 >gi|113475338|ref|YP_721399.1| HSR1-related GTP-binding protein [Trichodesmium erythraeum IMS101] gi|110166386|gb|ABG50926.1| GTP-binding protein, HSR1-related [Trichodesmium erythraeum IMS101] Length=524 Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 126/494 (26%), Positives = 228/494 (47%), Gaps = 31/494 (6%) Query 29 DVFCQLDRIGARLAEPLRIALAGTLKAGKSTLVNALVGDDIAPTDATEATRIVTWFRHGP 88 +++ ++D+ +L P+R+A+ G +KAGKST++NAL+G+ I T EAT V W ++G Sbjct 29 NLYRKIDQCYQQLDLPMRVAIVGMIKAGKSTMMNALLGEKIVATGTVEATFNVNWLKYGE 88 Query 89 TPRVTANHRGGRRANVPITRRGGLSFDLRRINPAELID-------LEVEWPAEELIDATI 141 + + +++ G P + LR ++ + +E+ +P L + Sbjct 89 SKSLLVHYKNGSPPE-PKSFEELEDLTLRAEANSDSFNYLLSIKYIELSYPNPILKKFNL 147 Query 142 VDTPGTSSLACDASERTLRLL---------VPADGVPRVDAVVFLL-RTLNAADVALLKQ 191 +DTPG +S SE T L + DAV++L ++ + + + + Sbjct 148 IDTPGLASAYEADSENTKNFLQLHGQELTQATQEEASNADAVIYLFAKSFSESSQNTMAE 207 Query 192 IGGLVGGSVGALGIIGVASRADEIGAGRIDAMLSANDVAKRFTRELNQMGICQAVVPVSG 251 G G + IGV ++ D+ + + +L ++ +R E + G +PV G Sbjct 208 FQGAAFGQATPINAIGVLTKVDDYWSDGEEPILKGREITERLQSE-HLRGALYTTLPVCG 266 Query 252 LLALTARTLRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVD---AGIRAQLLE 308 LLA A+TL EF L +LA + L + + R R+ P + A R +L+ Sbjct 267 LLAFGAQTLTPEEFDTLMQLAALPESRLRSLVKNATRLREREYPKEPEIPPADKRKLVLD 326 Query 309 RFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDMLKAHTALVS 368 R G +GI ++ ++ +G + LA +L +RSG L ++I F R+ ++K AL Sbjct 327 RLGQYGIWLAANLIRSGTREKELLARKLFQRSGASELLDLIKSHFGNRAFLIKLSVALQQ 386 Query 369 LRR--FVQTHPVPATPY-VIADI----DPLLADTHAFEELRMLSLLPSRATTLNDDEIAS 421 ++ F++ + + ++ADI + L + F++L +L N DE+ Sbjct 387 IKAACFMEKQRLEGADFQMVADIAGEFERLEVEEQGFQQLAVLHSYYQGELGFNKDEVRQ 446 Query 422 LRRIIGGSGTSAAARLGL-DPANSREAPRAALAAAQHWRRRAAHPLN-DPFTTRACRAAV 479 L+ + G +GTS ARL L + A E A Q WR+RA ++ D T A Sbjct 447 LQAVTGENGTSLKARLELGENATDAEMTHVAQQRVQSWRQRANDYMSADSQTIEAATVIA 506 Query 480 RSAEAMVAEFSARR 493 S E ++ + + + Sbjct 507 HSYEQILYQIAQQE 520 >gi|307154220|ref|YP_003889604.1| GTP-binding protein HSR1-like protein [Cyanothece sp. PCC 7822] gi|306984448|gb|ADN16329.1| GTP-binding protein HSR1-related protein [Cyanothece sp. PCC 7822] Length=530 Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 125/486 (26%), Positives = 218/486 (45%), Gaps = 41/486 (8%) Query 34 LDRIGARLAEPLRIALAGTLKAGKSTLVNALVGDDIAPTDATEATRIVTWFRHGPTPRVT 93 L + RL +P+RIA+ G +KAGKSTL+NAL+GD + T + EAT + W R+G P + Sbjct 35 LKQCQDRLKQPMRIAIVGVIKAGKSTLMNALLGDKVVATGSVEATFNINWLRYGNQPSLK 94 Query 94 ANHRGGRRANVPITR--RGGLSFDLR-RINPAELID---LEVEWPAEELIDATIVDTPGT 147 H + P T+ + LR + N + +EV +P E L I+DTPG Sbjct 95 V-HFKDQYQRPPETKSIEELTALTLRAKENSQYFLSIKYIEVFYPQEMLKIFNIIDTPGL 153 Query 148 SSLACDASERTLRLL---------VPADGVPRVDAVVFLL-RTLNAADVALLKQIGGLVG 197 S + S+ T L V + + DAV++L + + D ++ G + Sbjct 154 KSFYEEDSKNTQEFLQLCGDELTQVTQEQAAQADAVLYLFSQAIGLQDAQTVEAFQGPLV 213 Query 198 GSVGALGIIGVASRADEIGA--GRIDAMLSANDVAKRFTRELNQMGICQAVVPVSGLLAL 255 + + IG ++ D + D M ++R + + + P+ GLLA Sbjct 214 NNATPINAIGALTKVDMYASDPNITDPMAEGEKNSQRLMQNTQVNRLFYTIYPICGLLAE 273 Query 256 TARTLRQTEFIALRKLAGAERTEL-NRALLSVDRFVRR------DSPLPVDAGIRAQLLE 308 A+TL + L KL + +L + S+ R+ + +P+ R +++ Sbjct 274 GAQTLTAKHWDILLKL----KQQLPEKKFRSISRYYGKFTGDYNSEEVPISKKDREEIIN 329 Query 309 RFGMFGIRMSIAVLAAGVTDSTGLAAELLERSGLVALRNVIDQQFAQRSDMLKAHTAL-- 366 + G++GI ++ ++++GV L EL++++G+ LR++I F R+ ++K T L Sbjct 330 QLGLYGISLAYDLISSGVNTLEQLQEELMKKTGIPELRHLILSHFGHRAFLIKLGTVLGQ 389 Query 367 VSLRRFVQTHPVPATPYVIAD-----IDPLLADTHAFEELRMLSLLPSRATTLNDDEIAS 421 ++ F + + T I + D L A AF+EL +L + ++ E Sbjct 390 ITTAYFQERQRLKGTQLQILEEIAGQFDTLQAQEQAFQELNVLRSYYEKKLDFDEQEEKQ 449 Query 422 LRRIIGGSGTSAAARLGLDPANSREAPRAALAAAQ---HWRRRAAHPL-NDPFTTRACRA 477 L +I G +G S RLG++ L A + +W +RA + D T A + Sbjct 450 LLQITGENGNSCGERLGMEQGEQATVTEMLLVAEERMRYWTQRANDYMAGDRATLAAAKV 509 Query 478 AVRSAE 483 RS E Sbjct 510 LARSYE 515 >gi|134103688|ref|YP_001109349.1| isoniazid inductible gene protein IniC [Saccharopolyspora erythraea NRRL 2338] gi|133916311|emb|CAM06424.1| isoniazid inductible gene protein IniC [Saccharopolyspora erythraea NRRL 2338] Length=493 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 146/449 (33%), Positives = 215/449 (48%), Gaps = 37/449 (8%) Query 40 RLAEPLRIALAGTLKAGKSTLVNALVGDDIAPTDATEATRIVTWFRHGPTPRV-TANHRG 98 RL+ PL++A+AG +K+GKSTLVNAL+G +APTD E TR+VT F++G RV H G Sbjct 19 RLSAPLQVAVAGRIKSGKSTLVNALIGRRVAPTDVGECTRLVTRFQYGTVDRVEVVFHDG 78 Query 99 GRRANVPITRRGGLSFDLRRINPAELIDLEVEWPAEELIDATIVDTPGTSSLACDASERT 158 G++A +P GG+ DL I+ ++ LE L D T++DTPG SL + RT Sbjct 79 GKQA-IPFDADGGIPADL-GIDLEKISHLEAYLTNAVLRDLTVIDTPGLGSLDAASVART 136 Query 159 LRLL---------------VPADGVPRVDAVVFLLRTLNAAD--VALLKQIGGLVGGSVG 201 LL V + V +AV++++ AD AL G Sbjct 137 EELLGTRRGDGEAGDDLDPVSRNAVAGAEAVLYVVTQAVRADDQQALASFTAATASREAG 196 Query 202 ALGIIGVASRADEIGAGRI-----DAMLSANDVAKRFTRELNQMGICQAVVPVSGLLALT 256 + I + ++AD I + D +A +A + + L V+PV GLLA T Sbjct 197 PVNAIALLNKADTIEPDSVSESGGDVWTAATLIAGKQAQLLKPR--VADVLPVIGLLAET 254 Query 257 ART--LRQTEFIALRKLAGAERTELNRALLSVDRFVRRDSPLPVDAGIRAQLLERFGMFG 314 A T + ALR+LA + L+S D F D +P AG+R +LLER ++G Sbjct 255 AETGGFTSADADALRRLAALDEVTRETLLMSADLFTSWDCDVP--AGVRTRLLERMDLYG 312 Query 315 IRMSIAVLAAGVTDSTG-LAAELLERSGLVALRNVIDQQFAQRSDMLKAHTALVSLRRFV 373 IR ++A + A + G L LL+ SGL + + +D F R+D +KA AL S+ Sbjct 313 IRHALAAIDAEPEITAGDLRRRLLDSSGLAGVMSRLDSVFRARADGIKAAAALASVTALA 372 Query 374 QTHPVPATPYVIAD-IDPLLA--DTHAFEELRMLSLLPSRATTLNDDEIASLRRIIGGSG 430 + D I+ LLA + H L L+L+ S A + +D + R+ GS Sbjct 373 HASGDQGERQRVHDAIEVLLAKPEAHQLRLLEALTLVASGAVEMPEDLAEEVMRV--GSA 430 Query 431 TSAAARLGLDPANSREAPRAALAAAQHWR 459 + +LGL +E AL A WR Sbjct 431 SDVGEQLGLPGRGRQELTDYALERAGWWR 459 Lambda K H 0.322 0.135 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1056355851004 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40