BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0353
Length=126
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607494|ref|NP_214867.1| HEAT shock protein transcriptional ... 253 5e-66
gi|308375135|ref|ZP_07442826.2| merR-family heat shock protein t... 253 5e-66
gi|289572939|ref|ZP_06453166.1| merR-family heat shock protein t... 252 1e-65
gi|183980665|ref|YP_001848956.1| heat shock protein transcriptio... 224 5e-57
gi|240171642|ref|ZP_04750301.1| putative heat shock protein tran... 216 7e-55
gi|118616412|ref|YP_904744.1| heat shock protein transcriptional... 214 2e-54
gi|296167810|ref|ZP_06849996.1| transcriptional regulator HspR [... 211 2e-53
gi|254820192|ref|ZP_05225193.1| transcriptional regulator, MerR ... 211 3e-53
gi|118466080|ref|YP_883931.1| MerR family transcriptional regula... 211 3e-53
gi|254777240|ref|ZP_05218756.1| transcriptional regulator, MerR ... 211 4e-53
gi|41409941|ref|NP_962777.1| HspR [Mycobacterium avium subsp. pa... 207 4e-52
gi|15828347|ref|NP_302610.1| heat shock regulator [Mycobacterium... 207 6e-52
gi|333988981|ref|YP_004521595.1| heat shock protein transcriptio... 206 7e-52
gi|108797445|ref|YP_637642.1| MerR family transcriptional regula... 192 1e-47
gi|342859154|ref|ZP_08715808.1| MerR family transcriptional regu... 191 4e-47
gi|169631348|ref|YP_001704997.1| heat shock protein transcriptio... 184 3e-45
gi|312141346|ref|YP_004008682.1| merr family transcriptional reg... 184 5e-45
gi|111022466|ref|YP_705438.1| heat shock protein [Rhodococcus jo... 179 2e-43
gi|226364984|ref|YP_002782767.1| heat shock protein HspR [Rhodoc... 176 7e-43
gi|120401653|ref|YP_951482.1| MerR family transcriptional regula... 176 8e-43
gi|226304843|ref|YP_002764801.1| heat shock protein HspR [Rhodoc... 176 1e-42
gi|229493020|ref|ZP_04386815.1| putative heat shock protein HspR... 176 1e-42
gi|145220861|ref|YP_001131539.1| MerR family transcriptional reg... 176 1e-42
gi|315442184|ref|YP_004075063.1| transcriptional regulator [Myco... 175 2e-42
gi|262204098|ref|YP_003275306.1| MerR family transcriptional reg... 172 2e-41
gi|343927368|ref|ZP_08766841.1| heat shock protein HspR [Gordoni... 171 4e-41
gi|54027380|ref|YP_121622.1| putative transcriptional regulator ... 164 3e-39
gi|333921731|ref|YP_004495312.1| transcriptional regulator HspR ... 164 4e-39
gi|317508670|ref|ZP_07966326.1| MerR family regulatory protein [... 163 7e-39
gi|118468115|ref|YP_885119.1| MerR family transcriptional regula... 162 1e-38
gi|296138226|ref|YP_003645469.1| MerR family transcriptional reg... 162 1e-38
gi|326383374|ref|ZP_08205061.1| regulatory protein MerR [Gordoni... 157 6e-37
gi|305680677|ref|ZP_07403485.1| transcriptional regulator, MerR ... 154 3e-36
gi|225022518|ref|ZP_03711710.1| hypothetical protein CORMATOL_02... 154 4e-36
gi|296393851|ref|YP_003658735.1| MerR family transcriptional reg... 152 1e-35
gi|319949481|ref|ZP_08023537.1| heat shock protein [Dietzia cinn... 151 2e-35
gi|340532659|gb|AEK47864.1| MerR family transcriptional regulato... 150 5e-35
gi|300790963|ref|YP_003771254.1| MerR family transcriptional reg... 150 5e-35
gi|296119048|ref|ZP_06837620.1| transcriptional regulator HspR [... 150 6e-35
gi|300859313|ref|YP_003784296.1| MerR family transcriptional reg... 149 1e-34
gi|337291729|ref|YP_004630750.1| MerR family transcription regul... 147 6e-34
gi|302531171|ref|ZP_07283513.1| heat shock regulator [Streptomyc... 146 1e-33
gi|227834140|ref|YP_002835847.1| heat shock protein regulator Hs... 145 1e-33
gi|38234666|ref|NP_940433.1| putative chaperone locus transcript... 145 1e-33
gi|227547839|ref|ZP_03977888.1| heat shock protein regulator Hsp... 144 4e-33
gi|302552959|ref|ZP_07305301.1| heat shock transcriptional regul... 144 6e-33
gi|255325564|ref|ZP_05366664.1| putative heat shock protein HspR... 143 8e-33
gi|311740457|ref|ZP_07714285.1| transcriptional regulator HspR [... 143 8e-33
gi|328883477|emb|CCA56716.1| HspR, transcriptional repressor of ... 142 1e-32
gi|337767302|emb|CCB76013.1| putative heat shock protein hspR [S... 142 2e-32
>gi|15607494|ref|NP_214867.1| HEAT shock protein transcriptional repressor HspR [Mycobacterium
tuberculosis H37Rv]
gi|15839739|ref|NP_334776.1| transcriptional regulator HspR [Mycobacterium tuberculosis CDC1551]
gi|31791531|ref|NP_854024.1| HEAT shock protein transcriptional regulator HspR [Mycobacterium
bovis AF2122/97]
74 more sequence titles
Length=126
Score = 253 bits (647), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 126/126 (100%), Positives = 126/126 (100%), Gaps = 0/126 (0%)
Query 1 MAKNPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQ 60
MAKNPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQ
Sbjct 1 MAKNPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQ 60
Query 61 VQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALV 120
VQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALV
Sbjct 61 VQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALV 120
Query 121 VWKPRR 126
VWKPRR
Sbjct 121 VWKPRR 126
>gi|308375135|ref|ZP_07442826.2| merR-family heat shock protein transcriptional repressor hspR
[Mycobacterium tuberculosis SUMu007]
gi|308376372|ref|ZP_07438615.2| merR-family heat shock protein transcriptional repressor hspR
[Mycobacterium tuberculosis SUMu008]
gi|308347355|gb|EFP36206.1| merR-family heat shock protein transcriptional repressor hspR
[Mycobacterium tuberculosis SUMu007]
gi|308351298|gb|EFP40149.1| merR-family heat shock protein transcriptional repressor hspR
[Mycobacterium tuberculosis SUMu008]
Length=127
Score = 253 bits (647), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 126/126 (100%), Positives = 126/126 (100%), Gaps = 0/126 (0%)
Query 1 MAKNPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQ 60
MAKNPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQ
Sbjct 2 MAKNPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQ 61
Query 61 VQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALV 120
VQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALV
Sbjct 62 VQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALV 121
Query 121 VWKPRR 126
VWKPRR
Sbjct 122 VWKPRR 127
>gi|289572939|ref|ZP_06453166.1| merR-family heat shock protein transcriptional repressor hspR
[Mycobacterium tuberculosis K85]
gi|289537370|gb|EFD41948.1| merR-family heat shock protein transcriptional repressor hspR
[Mycobacterium tuberculosis K85]
Length=126
Score = 252 bits (643), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/126 (99%), Positives = 125/126 (99%), Gaps = 0/126 (0%)
Query 1 MAKNPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQ 60
MAKNPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQ
Sbjct 1 MAKNPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQ 60
Query 61 VQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALV 120
VQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAV PKSTALV
Sbjct 61 VQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVAPKSTALV 120
Query 121 VWKPRR 126
VWKPRR
Sbjct 121 VWKPRR 126
>gi|183980665|ref|YP_001848956.1| heat shock protein transcriptional repressor HspR [Mycobacterium
marinum M]
gi|183173991|gb|ACC39101.1| heat shock protein transcriptional repressor HspR (MerR family)
[Mycobacterium marinum M]
Length=128
Score = 224 bits (570), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 110/126 (88%), Positives = 119/126 (95%), Gaps = 0/126 (0%)
Query 1 MAKNPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQ 60
MAKN ++GE+RTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYS HDV LLRQ
Sbjct 1 MAKNSREGEARTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSEHDVNLLRQ 60
Query 61 VQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALV 120
VQ LSQ+EGVNLAGIKRIIELT+QVEALQSRLQEMA+EL +RA QRREVA+VPKSTALV
Sbjct 61 VQQLSQEEGVNLAGIKRIIELTNQVEALQSRLQEMADELETMRAKQRREVALVPKSTALV 120
Query 121 VWKPRR 126
VW+PRR
Sbjct 121 VWQPRR 126
>gi|240171642|ref|ZP_04750301.1| putative heat shock protein transcriptional regulator [Mycobacterium
kansasii ATCC 12478]
Length=123
Score = 216 bits (551), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 107/121 (89%), Positives = 117/121 (97%), Gaps = 0/121 (0%)
Query 6 KDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHLS 65
K ESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYS DV+LLRQVQHLS
Sbjct 3 KKDESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSERDVDLLRQVQHLS 62
Query 66 QDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALVVWKPR 125
Q+EGVNLAGIKRIIELT+QVEALQ+R++EMAEELAVLRANQRRE+AV+PKSTALV+W+PR
Sbjct 63 QEEGVNLAGIKRIIELTNQVEALQARVKEMAEELAVLRANQRRELAVLPKSTALVLWQPR 122
Query 126 R 126
R
Sbjct 123 R 123
>gi|118616412|ref|YP_904744.1| heat shock protein transcriptional repressor HspR [Mycobacterium
ulcerans Agy99]
gi|118568522|gb|ABL03273.1| heat shock protein transcriptional repressor HspR (MerR family)
[Mycobacterium ulcerans Agy99]
Length=160
Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/123 (87%), Positives = 116/123 (95%), Gaps = 0/123 (0%)
Query 1 MAKNPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQ 60
MAKN ++GE+RTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYS HDV LLRQ
Sbjct 1 MAKNSREGEARTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSEHDVNLLRQ 60
Query 61 VQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALV 120
VQ LSQ+EGVNLAGIKRIIELT+QVEALQSRLQEMA+EL +RA QRREVA+VP+STALV
Sbjct 61 VQQLSQEEGVNLAGIKRIIELTNQVEALQSRLQEMADELETMRAKQRREVALVPRSTALV 120
Query 121 VWK 123
VW+
Sbjct 121 VWQ 123
>gi|296167810|ref|ZP_06849996.1| transcriptional regulator HspR [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897040|gb|EFG76660.1| transcriptional regulator HspR [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=128
Score = 211 bits (538), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/126 (85%), Positives = 118/126 (94%), Gaps = 1/126 (0%)
Query 1 MAKNPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQ 60
MAKN ++ +SRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYS HDV LLR+
Sbjct 1 MAKNSRE-DSRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSEHDVNLLRE 59
Query 61 VQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALV 120
VQ LSQDEGVNLAGIKRIIELT+QVEALQSR+QE+ EELA +RA QRR++AVVPKSTA+V
Sbjct 60 VQRLSQDEGVNLAGIKRIIELTNQVEALQSRVQELTEELAQVRAGQRRDLAVVPKSTAVV 119
Query 121 VWKPRR 126
VW+PRR
Sbjct 120 VWQPRR 125
>gi|254820192|ref|ZP_05225193.1| transcriptional regulator, MerR family protein [Mycobacterium
intracellulare ATCC 13950]
Length=131
Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/129 (83%), Positives = 120/129 (94%), Gaps = 3/129 (2%)
Query 1 MAK---NPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVEL 57
MAK N ++ ++RTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYS HDV+L
Sbjct 1 MAKGSSNSRNEDARTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSEHDVDL 60
Query 58 LRQVQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKST 117
LR+VQ LSQDEGVNLAGIKRIIELT+QVEALQ+R++E+ EELA LRA+QRR+VAVVPKST
Sbjct 61 LREVQRLSQDEGVNLAGIKRIIELTNQVEALQARIKELNEELAQLRASQRRDVAVVPKST 120
Query 118 ALVVWKPRR 126
ALVVW+PRR
Sbjct 121 ALVVWQPRR 129
>gi|118466080|ref|YP_883931.1| MerR family transcriptional regulator [Mycobacterium avium 104]
gi|118167367|gb|ABK68264.1| transcriptional regulator, MerR family protein [Mycobacterium
avium 104]
gi|336460270|gb|EGO39172.1| putative transcriptional regulator [Mycobacterium avium subsp.
paratuberculosis S397]
Length=131
Score = 211 bits (536), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 104/126 (83%), Positives = 118/126 (94%), Gaps = 0/126 (0%)
Query 1 MAKNPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQ 60
MAKN K ESRTFLISVAAELAGMHAQTLRTYDRLGLVSP+RTSGGGRRYS HDV+LLR+
Sbjct 1 MAKNRKGHESRTFLISVAAELAGMHAQTLRTYDRLGLVSPQRTSGGGRRYSEHDVDLLRE 60
Query 61 VQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALV 120
VQ LSQDEGVNLAGIKRIIELT+QVEALQ+R++E+ EELA +RA QRR++AV+PKSTALV
Sbjct 61 VQRLSQDEGVNLAGIKRIIELTNQVEALQARVKELTEELAQVRAGQRRDLAVLPKSTALV 120
Query 121 VWKPRR 126
VW+PR+
Sbjct 121 VWQPRK 126
>gi|254777240|ref|ZP_05218756.1| transcriptional regulator, MerR family protein [Mycobacterium
avium subsp. avium ATCC 25291]
Length=131
Score = 211 bits (536), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/126 (83%), Positives = 118/126 (94%), Gaps = 0/126 (0%)
Query 1 MAKNPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQ 60
MAKN K ESRTFLISVAAELAGMHAQTLRTYDRLGLVSP+RTSGGGRRYS HDV+LLR+
Sbjct 1 MAKNRKGHESRTFLISVAAELAGMHAQTLRTYDRLGLVSPQRTSGGGRRYSEHDVDLLRE 60
Query 61 VQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALV 120
VQ LSQDEGVNLAGIKRIIELT+QVEALQ+R++E+ EELA +RA QRR++AV+PKSTALV
Sbjct 61 VQRLSQDEGVNLAGIKRIIELTNQVEALQARVKELTEELAQVRAGQRRDLAVLPKSTALV 120
Query 121 VWKPRR 126
VW+PR+
Sbjct 121 VWQPRK 126
>gi|41409941|ref|NP_962777.1| HspR [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41398774|gb|AAS06393.1| HspR [Mycobacterium avium subsp. paratuberculosis K-10]
Length=131
Score = 207 bits (527), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/126 (82%), Positives = 117/126 (93%), Gaps = 0/126 (0%)
Query 1 MAKNPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQ 60
MAKN K ESRTFLISVAAELAGMHAQTLRTYDRLGLVSP+RTSGGGR YS HDV+LLR+
Sbjct 1 MAKNRKGHESRTFLISVAAELAGMHAQTLRTYDRLGLVSPQRTSGGGRWYSEHDVDLLRE 60
Query 61 VQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALV 120
VQ LSQDEGVNLAGIKRIIELT+QVEALQ+R++E+ EELA +RA QRR++AV+PKSTALV
Sbjct 61 VQRLSQDEGVNLAGIKRIIELTNQVEALQARVKELTEELAQVRAGQRRDLAVLPKSTALV 120
Query 121 VWKPRR 126
VW+PR+
Sbjct 121 VWQPRK 126
>gi|15828347|ref|NP_302610.1| heat shock regulator [Mycobacterium leprae TN]
gi|221230824|ref|YP_002504240.1| heat shock regulator [Mycobacterium leprae Br4923]
gi|13094040|emb|CAC32010.1| heat shock regulator [Mycobacterium leprae]
gi|219933931|emb|CAR72592.1| heat shock regulator [Mycobacterium leprae Br4923]
Length=132
Score = 207 bits (526), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 100/125 (80%), Positives = 115/125 (92%), Gaps = 0/125 (0%)
Query 2 AKNPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQV 61
+++P+ ESRTFLIS AAELAGMHAQTLRTYDRLGLVSP R SGGGRRYS HDVELLRQV
Sbjct 6 SRDPRQQESRTFLISAAAELAGMHAQTLRTYDRLGLVSPSRASGGGRRYSQHDVELLRQV 65
Query 62 QHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALVV 121
Q LSQ+EGVNLAGIKRIIELT+QVEALQ +LQE+ +EL +LRANQRR++AVVPKSTALV+
Sbjct 66 QRLSQNEGVNLAGIKRIIELTNQVEALQLKLQELTDELVMLRANQRRDLAVVPKSTALVL 125
Query 122 WKPRR 126
W+PR+
Sbjct 126 WQPRK 130
>gi|333988981|ref|YP_004521595.1| heat shock protein transcriptional repressor HspR [Mycobacterium
sp. JDM601]
gi|333484949|gb|AEF34341.1| heat shock protein transcriptional repressor HspR [Mycobacterium
sp. JDM601]
Length=124
Score = 206 bits (525), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 103/125 (83%), Positives = 116/125 (93%), Gaps = 2/125 (1%)
Query 1 MAKNPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQ 60
M+K+ K+ SRTFLISVAAELAGMHAQTLRTYDR+GLVSPRR+SGGGRRYS DV+LLR+
Sbjct 1 MSKSEKN--SRTFLISVAAELAGMHAQTLRTYDRIGLVSPRRSSGGGRRYSERDVDLLRE 58
Query 61 VQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALV 120
VQ LS DEGVNLAGIKRIIELT+QVEALQSR++EMA EL +LRANQRRE+AVVPKSTA+V
Sbjct 59 VQRLSHDEGVNLAGIKRIIELTNQVEALQSRVKEMAAELEMLRANQRREIAVVPKSTAVV 118
Query 121 VWKPR 125
VWKPR
Sbjct 119 VWKPR 123
>gi|108797445|ref|YP_637642.1| MerR family transcriptional regulator [Mycobacterium sp. MCS]
gi|119866530|ref|YP_936482.1| MerR family transcriptional regulator [Mycobacterium sp. KMS]
gi|126433064|ref|YP_001068755.1| MerR family transcriptional regulator [Mycobacterium sp. JLS]
gi|108767864|gb|ABG06586.1| transcriptional regulator, MerR family [Mycobacterium sp. MCS]
gi|119692619|gb|ABL89692.1| putative transcriptional regulator, MerR family [Mycobacterium
sp. KMS]
gi|126232864|gb|ABN96264.1| putative transcriptional regulator, MerR family [Mycobacterium
sp. JLS]
Length=129
Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/120 (80%), Positives = 110/120 (92%), Gaps = 0/120 (0%)
Query 6 KDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHLS 65
++ E+RTFLISVAAELAGMHAQTLRTYDRLGLVSP+RTSGGGRRYS DV+LLR+VQ LS
Sbjct 5 RNEEARTFLISVAAELAGMHAQTLRTYDRLGLVSPQRTSGGGRRYSERDVDLLREVQRLS 64
Query 66 QDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALVVWKPR 125
QDEGVNLAGIKRIIELT+QVEALQSR++E+ E+ LRANQRR++AV KSTALVVW+PR
Sbjct 65 QDEGVNLAGIKRIIELTNQVEALQSRVKELVREVEELRANQRRDLAVPAKSTALVVWQPR 124
>gi|342859154|ref|ZP_08715808.1| MerR family transcriptional regulator [Mycobacterium colombiense
CECT 3035]
gi|342133395|gb|EGT86598.1| MerR family transcriptional regulator [Mycobacterium colombiense
CECT 3035]
Length=112
Score = 191 bits (484), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/110 (86%), Positives = 105/110 (96%), Gaps = 0/110 (0%)
Query 17 VAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHLSQDEGVNLAGIK 76
+AAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYS HDV+LLR+VQ LSQDEGVNLAGIK
Sbjct 1 MAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSEHDVDLLREVQRLSQDEGVNLAGIK 60
Query 77 RIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALVVWKPRR 126
RIIELT+QVEALQ+R++E+ EELA RA+QRR+VAVVPKSTALVVW+PRR
Sbjct 61 RIIELTNQVEALQARVKELTEELAQTRASQRRDVAVVPKSTALVVWQPRR 110
>gi|169631348|ref|YP_001704997.1| heat shock protein transcriptional regulator HspR [Mycobacterium
abscessus ATCC 19977]
gi|169243315|emb|CAM64343.1| Probable heat shock protein transcriptional regulator HspR [Mycobacterium
abscessus]
Length=139
Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/124 (76%), Positives = 109/124 (88%), Gaps = 2/124 (1%)
Query 3 KNPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQ 62
+ P+ G +RTFLISVAAELAGMHAQTLRTYDRLGLVSP RT+GGGRRYS DV+LLR+VQ
Sbjct 14 RQPERG-ARTFLISVAAELAGMHAQTLRTYDRLGLVSPERTTGGGRRYSQRDVDLLREVQ 72
Query 63 HLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLR-ANQRREVAVVPKSTALVV 121
LSQDEGVNLAGIKR+IELT+QVEALQ++L E+ E+A LR A REVAV+PKSTA+VV
Sbjct 73 RLSQDEGVNLAGIKRVIELTNQVEALQAKLAELTAEVAQLRAATAGREVAVIPKSTAVVV 132
Query 122 WKPR 125
W+PR
Sbjct 133 WQPR 136
>gi|312141346|ref|YP_004008682.1| merr family transcriptional regulator [Rhodococcus equi 103S]
gi|325673814|ref|ZP_08153504.1| transcriptional regulator HspR [Rhodococcus equi ATCC 33707]
gi|311890685|emb|CBH50004.1| MerR family transcriptional regulator [Rhodococcus equi 103S]
gi|325555079|gb|EGD24751.1| transcriptional regulator HspR [Rhodococcus equi ATCC 33707]
Length=135
Score = 184 bits (466), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 89/121 (74%), Positives = 104/121 (86%), Gaps = 0/121 (0%)
Query 5 PKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHL 64
P D ++R F+ISVAAELAGMHAQTLR YDRLGLV+P RT+GGGRRYS DV LLR+VQ L
Sbjct 12 PADPDARVFVISVAAELAGMHAQTLRNYDRLGLVTPHRTTGGGRRYSPRDVALLREVQRL 71
Query 65 SQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALVVWKP 124
SQDEGVNLAGIKRIIELT+QVEALQ+R+ EMA E+A + A+ RRE+ +P+S ALVVWKP
Sbjct 72 SQDEGVNLAGIKRIIELTNQVEALQNRVDEMAAEIARVHASYRRELVPIPRSNALVVWKP 131
Query 125 R 125
R
Sbjct 132 R 132
>gi|111022466|ref|YP_705438.1| heat shock protein [Rhodococcus jostii RHA1]
gi|110821996|gb|ABG97280.1| probable heat shock protein [Rhodococcus jostii RHA1]
Length=135
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/119 (74%), Positives = 103/119 (87%), Gaps = 0/119 (0%)
Query 7 DGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHLSQ 66
D +++ F+ISVAAELAGMHAQTLR YDRLGLV+P RTSGGGRRYS DV LLR+VQ LSQ
Sbjct 14 DPDAQIFVISVAAELAGMHAQTLRNYDRLGLVTPHRTSGGGRRYSPRDVALLREVQRLSQ 73
Query 67 DEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALVVWKPR 125
DEGVNLAGIKRIIELT+QVEALQ R++E+AEE+A + A RR++ +P+S ALVVWKPR
Sbjct 74 DEGVNLAGIKRIIELTNQVEALQHRVRELAEEIAKIHAGYRRDLVPIPRSNALVVWKPR 132
>gi|226364984|ref|YP_002782767.1| heat shock protein HspR [Rhodococcus opacus B4]
gi|226243474|dbj|BAH53822.1| putative heat shock protein HspR [Rhodococcus opacus B4]
Length=135
Score = 176 bits (447), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 87/119 (74%), Positives = 102/119 (86%), Gaps = 0/119 (0%)
Query 7 DGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHLSQ 66
D +++ F+ISVAAELAGMHAQTLR YDRLGLV P RTSGGGRRYS DV LLR+VQ LSQ
Sbjct 14 DPDAQIFVISVAAELAGMHAQTLRNYDRLGLVIPHRTSGGGRRYSPRDVALLREVQRLSQ 73
Query 67 DEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALVVWKPR 125
DEGVNLAGIKRIIELT+QVEALQ R++E+AEE+A + A RR++ +P+S ALVVWKPR
Sbjct 74 DEGVNLAGIKRIIELTNQVEALQHRVRELAEEIAKVHAGYRRDLVPIPRSNALVVWKPR 132
>gi|120401653|ref|YP_951482.1| MerR family transcriptional regulator [Mycobacterium vanbaalenii
PYR-1]
gi|119954471|gb|ABM11476.1| putative transcriptional regulator, MerR family [Mycobacterium
vanbaalenii PYR-1]
Length=124
Score = 176 bits (447), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 89/117 (77%), Positives = 104/117 (89%), Gaps = 6/117 (5%)
Query 9 ESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHLSQDE 68
++RTFLISVAAELAGMHAQTLRTYDRLGLVSP+R+SGGGRRYS DV+LLR+VQ LSQDE
Sbjct 11 DARTFLISVAAELAGMHAQTLRTYDRLGLVSPQRSSGGGRRYSQRDVDLLREVQRLSQDE 70
Query 69 GVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALVVWKPR 125
GVNLAGIKRIIELT+QVEALQ+R++E+++E+ LRA R PKSTALVVW+PR
Sbjct 71 GVNLAGIKRIIELTNQVEALQARVRELSDEVERLRAQPR------PKSTALVVWQPR 121
>gi|226304843|ref|YP_002764801.1| heat shock protein HspR [Rhodococcus erythropolis PR4]
gi|226183958|dbj|BAH32062.1| putative heat shock protein HspR [Rhodococcus erythropolis PR4]
Length=135
Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/119 (72%), Positives = 103/119 (87%), Gaps = 0/119 (0%)
Query 7 DGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHLSQ 66
D +++ F+ISVAAELAGMHAQTLR YDRLGLV+P RT+GGGRRYS DV LLR+VQ LSQ
Sbjct 14 DPDAQIFVISVAAELAGMHAQTLRNYDRLGLVTPHRTTGGGRRYSPRDVALLREVQRLSQ 73
Query 67 DEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALVVWKPR 125
DEGVNLAGIKRIIELT+QVEALQ R++E+AEE+A + A RR++ +P++ ALVVWKPR
Sbjct 74 DEGVNLAGIKRIIELTNQVEALQHRVRELAEEIAKVHAGYRRDLVPIPRNNALVVWKPR 132
>gi|229493020|ref|ZP_04386815.1| putative heat shock protein HspR [Rhodococcus erythropolis SK121]
gi|229320050|gb|EEN85876.1| putative heat shock protein HspR [Rhodococcus erythropolis SK121]
Length=136
Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/119 (72%), Positives = 103/119 (87%), Gaps = 0/119 (0%)
Query 7 DGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHLSQ 66
D +++ F+ISVAAELAGMHAQTLR YDRLGLV+P RT+GGGRRYS DV LLR+VQ LSQ
Sbjct 15 DPDAQIFVISVAAELAGMHAQTLRNYDRLGLVTPHRTTGGGRRYSPRDVALLREVQRLSQ 74
Query 67 DEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALVVWKPR 125
DEGVNLAGIKRIIELT+QVEALQ R++E+AEE+A + A RR++ +P++ ALVVWKPR
Sbjct 75 DEGVNLAGIKRIIELTNQVEALQHRVRELAEEIAKVHAGYRRDLVPIPRNNALVVWKPR 133
>gi|145220861|ref|YP_001131539.1| MerR family transcriptional regulator [Mycobacterium gilvum PYR-GCK]
gi|145213347|gb|ABP42751.1| putative transcriptional regulator, MerR family [Mycobacterium
gilvum PYR-GCK]
Length=120
Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/117 (77%), Positives = 102/117 (88%), Gaps = 6/117 (5%)
Query 9 ESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHLSQDE 68
E+RTFLISVAAELAGMHAQTLRTYDRLGLVSP+R+SGGGRRYS DV+LLR+VQ LSQDE
Sbjct 7 EARTFLISVAAELAGMHAQTLRTYDRLGLVSPQRSSGGGRRYSQRDVDLLREVQRLSQDE 66
Query 69 GVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALVVWKPR 125
GVNLAGIKRIIELT+QVEALQSR++E+ E+ LR+ R PKSTALVVW+PR
Sbjct 67 GVNLAGIKRIIELTNQVEALQSRVRELTNEVEHLRSQPR------PKSTALVVWQPR 117
>gi|315442184|ref|YP_004075063.1| transcriptional regulator [Mycobacterium sp. Spyr1]
gi|315260487|gb|ADT97228.1| predicted transcriptional regulator [Mycobacterium sp. Spyr1]
Length=126
Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/117 (77%), Positives = 102/117 (88%), Gaps = 6/117 (5%)
Query 9 ESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHLSQDE 68
E+RTFLISVAAELAGMHAQTLRTYDRLGLVSP+R+SGGGRRYS DV+LLR+VQ LSQDE
Sbjct 13 EARTFLISVAAELAGMHAQTLRTYDRLGLVSPQRSSGGGRRYSQRDVDLLREVQRLSQDE 72
Query 69 GVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALVVWKPR 125
GVNLAGIKRIIELT+QVEALQSR++E+ E+ LR+ R PKSTALVVW+PR
Sbjct 73 GVNLAGIKRIIELTNQVEALQSRVRELTNEVEHLRSQPR------PKSTALVVWQPR 123
>gi|262204098|ref|YP_003275306.1| MerR family transcriptional regulator [Gordonia bronchialis DSM
43247]
gi|262087445|gb|ACY23413.1| regulatory protein MerR [Gordonia bronchialis DSM 43247]
Length=143
Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/122 (69%), Positives = 106/122 (87%), Gaps = 2/122 (1%)
Query 6 KDG--ESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQH 63
KDG ++ TFLISVAAELAGMHAQTLRTYDRLGLV+P+RTSGGGRRYS DVELLR++Q
Sbjct 11 KDGARDAATFLISVAAELAGMHAQTLRTYDRLGLVTPQRTSGGGRRYSTRDVELLREIQR 70
Query 64 LSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALVVWK 123
LSQ+EGVNLAGIKRII+L +QV+ALQ R++E+++EL+ R + E+ VP+++ALVVW+
Sbjct 71 LSQEEGVNLAGIKRIIDLENQVDALQQRVRELSDELSAARGKRGGELVPVPRTSALVVWQ 130
Query 124 PR 125
PR
Sbjct 131 PR 132
>gi|343927368|ref|ZP_08766841.1| heat shock protein HspR [Gordonia alkanivorans NBRC 16433]
gi|343762705|dbj|GAA13767.1| heat shock protein HspR [Gordonia alkanivorans NBRC 16433]
Length=132
Score = 171 bits (433), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/120 (69%), Positives = 103/120 (86%), Gaps = 0/120 (0%)
Query 7 DGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHLSQ 66
D + TF+ISVAAELAGMHAQTLRTYDRLGLV+P+RTSGGGRRYS DV+LLR++Q LSQ
Sbjct 8 DADGATFMISVAAELAGMHAQTLRTYDRLGLVTPQRTSGGGRRYSSRDVDLLREIQRLSQ 67
Query 67 DEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALVVWKPRR 126
+EGVNLAGIKRII+L++QVEALQ R++E+ +E+A R + E+ VP++ ALVVW+PRR
Sbjct 68 EEGVNLAGIKRIIDLSNQVEALQQRVRELTDEVAASRNRRGGELVPVPRTNALVVWQPRR 127
>gi|54027380|ref|YP_121622.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
gi|54018888|dbj|BAD60258.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
Length=133
Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/129 (68%), Positives = 104/129 (81%), Gaps = 4/129 (3%)
Query 1 MAKNPK--DGESRT--FLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVE 56
M+ +PK G +R F+ISVAA+LAGMHAQTLRTYDRLGLV+P+RTSGGGRRYS DVE
Sbjct 2 MSTDPKKASGGARGEFFMISVAAQLAGMHAQTLRTYDRLGLVTPQRTSGGGRRYSARDVE 61
Query 57 LLRQVQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKS 116
LLR+VQ LSQDEGVNLAGIKRIIELT+QVE LQ + E+ EL +R+ R +++ +S
Sbjct 62 LLREVQRLSQDEGVNLAGIKRIIELTNQVERLQQEVSELRAELDRVRSGYRPDLSPPQRS 121
Query 117 TALVVWKPR 125
TALVVWKPR
Sbjct 122 TALVVWKPR 130
>gi|333921731|ref|YP_004495312.1| transcriptional regulator HspR [Amycolicicoccus subflavus DQS3-9A1]
gi|333483952|gb|AEF42512.1| Transcriptional regulator HspR [Amycolicicoccus subflavus DQS3-9A1]
Length=141
Score = 164 bits (415), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/113 (77%), Positives = 98/113 (87%), Gaps = 1/113 (0%)
Query 13 FLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHLSQDEGVNL 72
F ISVAAELAGMHAQTLRTYDRLGLV+P RT+GGGRRYS DVELLR+VQ LSQ+EGVNL
Sbjct 28 FAISVAAELAGMHAQTLRTYDRLGLVTPHRTTGGGRRYSERDVELLREVQRLSQEEGVNL 87
Query 73 AGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALVVWKPR 125
AGIKRIIELT+QVEALQSRL E+ +E+A LR +R E+ +P+S ALVVWK R
Sbjct 88 AGIKRIIELTNQVEALQSRLTELMDEVARLR-QRRGELVPLPRSQALVVWKRR 139
>gi|317508670|ref|ZP_07966326.1| MerR family regulatory protein [Segniliparus rugosus ATCC BAA-974]
gi|316253073|gb|EFV12487.1| MerR family regulatory protein [Segniliparus rugosus ATCC BAA-974]
Length=127
Score = 163 bits (413), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 81/125 (65%), Positives = 99/125 (80%), Gaps = 2/125 (1%)
Query 1 MAKNPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQ 60
M + P D ++ ++IS+AA+L+GMHAQTLRTYDR+GLVSP R GGGRRYSLHDVELLR+
Sbjct 3 MDEQPGDPHAKVYVISIAAQLSGMHAQTLRTYDRMGLVSPGRAPGGGRRYSLHDVELLRE 62
Query 61 VQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALV 120
VQ LSQ+EGVNLAGIKRI+ELT +V L+ RL E A+ + + Q RE+ PKSTALV
Sbjct 63 VQRLSQEEGVNLAGIKRIMELTKEVLELRRRLAETAQSASTV--PQGREIVPFPKSTALV 120
Query 121 VWKPR 125
VWKPR
Sbjct 121 VWKPR 125
>gi|118468115|ref|YP_885119.1| MerR family transcriptional regulator [Mycobacterium smegmatis
str. MC2 155]
gi|118169402|gb|ABK70298.1| transcriptional regulator, MerR family protein [Mycobacterium
smegmatis str. MC2 155]
Length=119
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/120 (70%), Positives = 98/120 (82%), Gaps = 10/120 (8%)
Query 6 KDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHLS 65
++ E+RTFLISVAAELAGMHAQTLRTYDRLGLV+P+RTSGGGRRYS DV+LLR+VQ LS
Sbjct 5 RNEEARTFLISVAAELAGMHAQTLRTYDRLGLVTPQRTSGGGRRYSERDVDLLREVQRLS 64
Query 66 QDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALVVWKPR 125
QDEGVNLAGIKRIIELT+QV+ALQ R+ E+ E+ LR STALV+W+PR
Sbjct 65 QDEGVNLAGIKRIIELTNQVDALQRRVAELTAEVERLR----------KPSTALVLWQPR 114
>gi|296138226|ref|YP_003645469.1| MerR family transcriptional regulator [Tsukamurella paurometabola
DSM 20162]
gi|296026360|gb|ADG77130.1| transcriptional regulator, MerR family [Tsukamurella paurometabola
DSM 20162]
Length=132
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/122 (68%), Positives = 101/122 (83%), Gaps = 3/122 (2%)
Query 5 PKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHL 64
P D ++ F+ISVAA+LAGMHAQTLRTYDRLGLV P R++GGGRRYS DV+LLR+VQ L
Sbjct 8 PDDPDAHVFMISVAAQLAGMHAQTLRTYDRLGLVKPERSAGGGRRYSTRDVDLLREVQRL 67
Query 65 SQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEEL-AVLRANQRREVAVVPKSTALVVWK 123
SQDEGVNLAGIKRII+LT+QV+ALQ R+QE+ ++ A R+ E+ VPKS+ALVVW+
Sbjct 68 SQDEGVNLAGIKRIIDLTNQVDALQRRVQELTAQVDAAHRSGA--ELVHVPKSSALVVWQ 125
Query 124 PR 125
PR
Sbjct 126 PR 127
>gi|326383374|ref|ZP_08205061.1| regulatory protein MerR [Gordonia neofelifaecis NRRL B-59395]
gi|326197780|gb|EGD54967.1| regulatory protein MerR [Gordonia neofelifaecis NRRL B-59395]
Length=136
Score = 157 bits (396), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/123 (64%), Positives = 99/123 (81%), Gaps = 3/123 (2%)
Query 5 PKD--GESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQ 62
P+D ++ TF+ISVAAELAGMHAQTLRTYDRLGLV+P+RT GGGRRYS DVE+LR++Q
Sbjct 10 PRDETADAATFMISVAAELAGMHAQTLRTYDRLGLVTPQRTRGGGRRYSSRDVEMLREIQ 69
Query 63 HLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALVVW 122
LSQDEGVNLAGIKRIIEL+ +VEAL+ R+ ++ ++ R E+ VP++ ALVVW
Sbjct 70 RLSQDEGVNLAGIKRIIELSDEVEALRKRVGDLTRQMESARPRH-GELVPVPRTNALVVW 128
Query 123 KPR 125
+PR
Sbjct 129 QPR 131
>gi|305680677|ref|ZP_07403485.1| transcriptional regulator, MerR family [Corynebacterium matruchotii
ATCC 14266]
gi|305660208|gb|EFM49707.1| transcriptional regulator, MerR family [Corynebacterium matruchotii
ATCC 14266]
Length=136
Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/129 (65%), Positives = 103/129 (80%), Gaps = 4/129 (3%)
Query 1 MAKNPKDGES--RTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELL 58
M+KN K+ ES F+ISVAAELAGMHAQTLRTYDR+GLV+P+RTSGGGRRYS DVELL
Sbjct 1 MSKN-KNQESMGEVFVISVAAELAGMHAQTLRTYDRMGLVTPQRTSGGGRRYSREDVELL 59
Query 59 RQVQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRR-EVAVVPKST 117
R VQ LSQ++GVNLAGIK II+L + E L+++LQE E VL+ N+ R E+ VP+ST
Sbjct 60 RTVQRLSQEDGVNLAGIKAIIQLKKENEELRTKLQEARAENEVLKHNRHRGEIVHVPRST 119
Query 118 ALVVWKPRR 126
A+V+W+ RR
Sbjct 120 AVVMWESRR 128
>gi|225022518|ref|ZP_03711710.1| hypothetical protein CORMATOL_02558 [Corynebacterium matruchotii
ATCC 33806]
gi|224944757|gb|EEG25966.1| hypothetical protein CORMATOL_02558 [Corynebacterium matruchotii
ATCC 33806]
Length=136
Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/129 (65%), Positives = 103/129 (80%), Gaps = 4/129 (3%)
Query 1 MAKNPKDGES--RTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELL 58
M+KN K+ ES F+ISVAAELAGMHAQTLRTYDR+GLV+P+RTSGGGRRYS DVELL
Sbjct 1 MSKN-KNQESMGEVFVISVAAELAGMHAQTLRTYDRMGLVTPQRTSGGGRRYSREDVELL 59
Query 59 RQVQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRR-EVAVVPKST 117
R VQ LSQ++GVNLAGIK II+L + E L+++LQE E VL+ N+ R E+ VP+ST
Sbjct 60 RTVQRLSQEDGVNLAGIKAIIQLKKENEELRTKLQEARAENEVLKHNRHRGEIVHVPRST 119
Query 118 ALVVWKPRR 126
A+V+W+ RR
Sbjct 120 AVVMWESRR 128
>gi|296393851|ref|YP_003658735.1| MerR family transcriptional regulator [Segniliparus rotundus
DSM 44985]
gi|296180998|gb|ADG97904.1| transcriptional regulator, MerR family [Segniliparus rotundus
DSM 44985]
Length=131
Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/121 (66%), Positives = 95/121 (79%), Gaps = 2/121 (1%)
Query 6 KDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHLS 65
+D ++ +ISVAA+L+GMHAQTLR YDR+GLVSP R GGGRRYSLHDVELLR+VQ LS
Sbjct 12 QDPHAKVLVISVAAQLSGMHAQTLRAYDRMGLVSPGRAPGGGRRYSLHDVELLREVQRLS 71
Query 66 QDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQRREVAVVPKSTALVVWKPR 125
Q+EGVNLAGIKRI+ELT +V L+ RL + AE A + RE+ PKSTALVVWKPR
Sbjct 72 QEEGVNLAGIKRIMELTQEVIELRRRLVDAAE--AARTVPRGRELVPFPKSTALVVWKPR 129
Query 126 R 126
+
Sbjct 130 K 130
>gi|319949481|ref|ZP_08023537.1| heat shock protein [Dietzia cinnamea P4]
gi|319436852|gb|EFV91916.1| heat shock protein [Dietzia cinnamea P4]
Length=143
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/119 (65%), Positives = 96/119 (81%), Gaps = 6/119 (5%)
Query 13 FLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHLSQDEGVNL 72
+ISVAAEL+G+HAQTLRTYDRLG+V+P RTSGGGRRYSL DV +LR+VQ LSQ+EGVNL
Sbjct 17 LVISVAAELSGLHAQTLRTYDRLGIVTPERTSGGGRRYSLRDVAMLREVQRLSQEEGVNL 76
Query 73 AGIKRIIELTSQVEALQSRLQEMAEELAVL------RANQRREVAVVPKSTALVVWKPR 125
AGIKRI+ELT+QV+AL+SR+ E+ EE A L E+ VP+ST++VVW+PR
Sbjct 77 AGIKRIMELTNQVDALRSRVSELVEENAELRRRAGTGGRAGGELVHVPRSTSVVVWRPR 135
>gi|340532659|gb|AEK47864.1| MerR family transcriptional regulator [Amycolatopsis mediterranei
S699]
Length=141
Score = 150 bits (379), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/135 (59%), Positives = 102/135 (76%), Gaps = 13/135 (9%)
Query 5 PKDGESRT--FLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQ 62
P++G+ T F+ISVAA+LAGMHAQTLRTYDR GLVSP RT GGGRRYS+ D+ LLR+VQ
Sbjct 6 PQEGDEETPVFVISVAAQLAGMHAQTLRTYDRQGLVSPGRTPGGGRRYSMRDIALLREVQ 65
Query 63 HLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAV-----------LRANQRREVA 111
LSQ++GVNLAGIKRIIEL +QV+AL++R+ E+ EEL A+ RR++
Sbjct 66 RLSQEDGVNLAGIKRIIELENQVDALRARITELTEELTAAYVAAEQATAAAHASYRRDLV 125
Query 112 VVPKSTALVVWKPRR 126
+ + TALVVW+P+R
Sbjct 126 PLNQQTALVVWRPKR 140
>gi|300790963|ref|YP_003771254.1| MerR family transcriptional regulator [Amycolatopsis mediterranei
U32]
gi|299800477|gb|ADJ50852.1| MerR family transcriptional regulator [Amycolatopsis mediterranei
U32]
Length=142
Score = 150 bits (379), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/135 (59%), Positives = 102/135 (76%), Gaps = 13/135 (9%)
Query 5 PKDGESRT--FLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQ 62
P++G+ T F+ISVAA+LAGMHAQTLRTYDR GLVSP RT GGGRRYS+ D+ LLR+VQ
Sbjct 7 PQEGDEETPVFVISVAAQLAGMHAQTLRTYDRQGLVSPGRTPGGGRRYSMRDIALLREVQ 66
Query 63 HLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAV-----------LRANQRREVA 111
LSQ++GVNLAGIKRIIEL +QV+AL++R+ E+ EEL A+ RR++
Sbjct 67 RLSQEDGVNLAGIKRIIELENQVDALRARITELTEELTAAYVAAEQATAAAHASYRRDLV 126
Query 112 VVPKSTALVVWKPRR 126
+ + TALVVW+P+R
Sbjct 127 PLNQQTALVVWRPKR 141
>gi|296119048|ref|ZP_06837620.1| transcriptional regulator HspR [Corynebacterium ammoniagenes
DSM 20306]
gi|295967883|gb|EFG81136.1| transcriptional regulator HspR [Corynebacterium ammoniagenes
DSM 20306]
Length=128
Score = 150 bits (379), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/121 (64%), Positives = 95/121 (79%), Gaps = 3/121 (2%)
Query 9 ESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHLSQDE 68
E ++ISVAAE AGMHAQTLRTYDRLGLV+P RTSGGGRRYS D++LLR++Q LSQ++
Sbjct 3 EKTLYVISVAAERAGMHAQTLRTYDRLGLVTPERTSGGGRRYSDRDIKLLRRIQELSQED 62
Query 69 GVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRANQ---RREVAVVPKSTALVVWKPR 125
GVNLAGIK IIELT + + L+ E+A EL LRA Q R E+ VP+ST++V+WKPR
Sbjct 63 GVNLAGIKAIIELTEECDRLREERDELAHELQSLRARQGQPRGELVHVPRSTSVVMWKPR 122
Query 126 R 126
R
Sbjct 123 R 123
>gi|300859313|ref|YP_003784296.1| MerR family transcriptional regulator [Corynebacterium pseudotuberculosis
FRC41]
gi|300686767|gb|ADK29689.1| MerR-family transcription regulator [Corynebacterium pseudotuberculosis
FRC41]
gi|302206998|gb|ADL11340.1| Heat shock protein HspR [Corynebacterium pseudotuberculosis C231]
gi|302331560|gb|ADL21754.1| Heat shock protein HspR [Corynebacterium pseudotuberculosis 1002]
gi|308277250|gb|ADO27149.1| Putative chaperone locus transcriptional regulator,HspR [Corynebacterium
pseudotuberculosis I19]
gi|341825693|gb|AEK93214.1| Heat shock protein HspR [Corynebacterium pseudotuberculosis PAT10]
Length=133
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/126 (64%), Positives = 96/126 (77%), Gaps = 5/126 (3%)
Query 4 NPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQH 63
+P+ GE F+ISVAAEL+GMHAQTLRTYDRLGLV+P+RT GGGRRYS DVELLR VQ
Sbjct 6 DPEFGE--VFVISVAAELSGMHAQTLRTYDRLGLVTPQRTRGGGRRYSRSDVELLRTVQR 63
Query 64 LSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRAN---QRREVAVVPKSTALV 120
LSQ+EGVNLAGIK IIEL + + L + L EEL L+ N R E+ VP+STA+V
Sbjct 64 LSQEEGVNLAGIKAIIELKKENKKLHNELMAAREELDQLKQNGARPRGEIVHVPRSTAVV 123
Query 121 VWKPRR 126
+W+PRR
Sbjct 124 MWEPRR 129
>gi|337291729|ref|YP_004630750.1| MerR family transcription regulator [Corynebacterium ulcerans
BR-AD22]
gi|334697705|gb|AEG82502.1| MerR-family transcription regulator [Corynebacterium ulcerans
809]
gi|334700035|gb|AEG84831.1| MerR-family transcription regulator [Corynebacterium ulcerans
BR-AD22]
Length=133
Score = 147 bits (370), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/126 (64%), Positives = 94/126 (75%), Gaps = 5/126 (3%)
Query 4 NPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQH 63
N + GE F+ISVAAEL+GMHAQTLRTYDRLGLV+P+RT GGGRRYS DVELLR VQ
Sbjct 6 NSEFGE--VFVISVAAELSGMHAQTLRTYDRLGLVTPQRTRGGGRRYSRSDVELLRTVQR 63
Query 64 LSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLRAN---QRREVAVVPKSTALV 120
LSQ+EGVNLAGIK IIEL + L+ L EEL L+ N R E+ VP+STA+V
Sbjct 64 LSQEEGVNLAGIKAIIELKKDNKRLRDELAAAREELEQLKQNGTRSRGEIVHVPRSTAVV 123
Query 121 VWKPRR 126
+W+PRR
Sbjct 124 MWEPRR 129
>gi|302531171|ref|ZP_07283513.1| heat shock regulator [Streptomyces sp. AA4]
gi|302440066|gb|EFL11882.1| heat shock regulator [Streptomyces sp. AA4]
Length=147
Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/131 (59%), Positives = 103/131 (79%), Gaps = 11/131 (8%)
Query 7 DGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHLSQ 66
D ++ F+ISVAA+L+G+HAQTLR+YDR GLVSP RT+GGGRRYSL D+ LLR+VQ LSQ
Sbjct 16 DEDTPVFVISVAAQLSGLHAQTLRSYDRHGLVSPGRTAGGGRRYSLRDIALLREVQRLSQ 75
Query 67 DEGVNLAGIKRIIELTSQVEALQSRLQEMAEEL-----------AVLRANQRREVAVVPK 115
++GVNL+GIKRIIEL +QV+ALQSR+ E+ EEL A + A+ R+++ + +
Sbjct 76 EDGVNLSGIKRIIELENQVDALQSRVHELTEELAAAYAAAEQAAAAVHASYRKDLVPLRQ 135
Query 116 STALVVWKPRR 126
+T+LVVWKP+R
Sbjct 136 NTSLVVWKPKR 146
>gi|227834140|ref|YP_002835847.1| heat shock protein regulator HspR [Corynebacterium aurimucosum
ATCC 700975]
gi|262183373|ref|ZP_06042794.1| heat shock protein regulator HspR [Corynebacterium aurimucosum
ATCC 700975]
gi|227455156|gb|ACP33909.1| heat shock protein regulator HspR [Corynebacterium aurimucosum
ATCC 700975]
Length=140
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/117 (63%), Positives = 93/117 (80%), Gaps = 3/117 (2%)
Query 13 FLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHLSQDEGVNL 72
++ISVAAEL+GMHAQTLRTYDR+GLVSP RTSGGGRRYS D+ELLR++Q LSQD+GVNL
Sbjct 18 YVISVAAELSGMHAQTLRTYDRMGLVSPARTSGGGRRYSESDIELLRKIQTLSQDDGVNL 77
Query 73 AGIKRIIELTSQVEALQSRLQEMAEELAVLRAN---QRREVAVVPKSTALVVWKPRR 126
AGIK IIELT++ + L + E+ E+ LR+ R E+ VP+ST++V+W PRR
Sbjct 78 AGIKSIIELTAERDRLAAERDELQAEVERLRSQGRPSRGELVHVPRSTSVVMWTPRR 134
>gi|38234666|ref|NP_940433.1| putative chaperone locus transcriptional regulator, HspR [Corynebacterium
diphtheriae NCTC 13129]
gi|38200930|emb|CAE50647.1| Putative chaperone locus transcriptional regulator, HspR [Corynebacterium
diphtheriae]
Length=132
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/117 (67%), Positives = 89/117 (77%), Gaps = 3/117 (2%)
Query 13 FLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHLSQDEGVNL 72
F+ISVAAELAGMHAQTLRTYDRLGLV+P+RT GGGRRYS DVELLR VQHLSQ EGVNL
Sbjct 10 FVISVAAELAGMHAQTLRTYDRLGLVTPQRTRGGGRRYSRDDVELLRTVQHLSQVEGVNL 69
Query 73 AGIKRIIELTSQVEALQSRLQEMAEELAVLR---ANQRREVAVVPKSTALVVWKPRR 126
AGIK IIEL + L+ L E VL+ A R E+ VP+STA+V+W+PRR
Sbjct 70 AGIKSIIELKKENAQLRKELAAARAEADVLKNRGARPRGEIVHVPRSTAVVMWQPRR 126
>gi|227547839|ref|ZP_03977888.1| heat shock protein regulator HspR [Corynebacterium lipophiloflavum
DSM 44291]
gi|227080132|gb|EEI18095.1| heat shock protein regulator HspR [Corynebacterium lipophiloflavum
DSM 44291]
Length=128
Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/126 (62%), Positives = 92/126 (74%), Gaps = 7/126 (5%)
Query 1 MAKNPKDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQ 60
MA + D E F+ISVAAEL GMHAQTLRTYDR+GLV+P RTSGGGRRYS D+ LLR+
Sbjct 1 MAYHSDDQE--YFVISVAAELTGMHAQTLRTYDRMGLVTPMRTSGGGRRYSRRDISLLRR 58
Query 61 VQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAE--ELAVLRANQRREVAVVPKSTA 118
+Q+LSQ+EGVNLAGIK IIELTSQ+E LQ E+ E A R E+ VP+STA
Sbjct 59 IQYLSQEEGVNLAGIKTIIELTSQIEQLQEENDELRRRAESAFRRGG---ELVHVPRSTA 115
Query 119 LVVWKP 124
+V W P
Sbjct 116 IVAWDP 121
>gi|302552959|ref|ZP_07305301.1| heat shock transcriptional regulator [Streptomyces viridochromogenes
DSM 40736]
gi|302470577|gb|EFL33670.1| heat shock transcriptional regulator [Streptomyces viridochromogenes
DSM 40736]
Length=150
Score = 144 bits (362), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 78/140 (56%), Positives = 102/140 (73%), Gaps = 16/140 (11%)
Query 3 KNPKD--GESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQ 60
+NP + E+ ++ISVAA+L+G+H QTLR YDRLGLVSP RT+G GRRYS D+ELLRQ
Sbjct 6 RNPYELTEETPVYVISVAAQLSGLHPQTLRQYDRLGLVSPDRTAGRGRRYSARDIELLRQ 65
Query 61 VQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEEL-----------AVLRANQRRE 109
VQ LSQDEG+NLAGIKRIIEL +QV ALQ+R+ EM + L A + A+ RR+
Sbjct 66 VQALSQDEGINLAGIKRIIELENQVAALQARVAEMEDALDGAAAAMRQREAAVHASYRRD 125
Query 110 VAV---VPKSTALVVWKPRR 126
+ V +++ALVVW+P+R
Sbjct 126 LVPYQEVQQTSALVVWRPKR 145
>gi|255325564|ref|ZP_05366664.1| putative heat shock protein HspR [Corynebacterium tuberculostearicum
SK141]
gi|255297352|gb|EET76669.1| putative heat shock protein HspR [Corynebacterium tuberculostearicum
SK141]
Length=149
Score = 143 bits (361), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 75/127 (60%), Positives = 96/127 (76%), Gaps = 7/127 (5%)
Query 6 KDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHLS 65
+D + ++ISVAAEL+GMHAQTLRTYDR+GLVSP RT GGGRRYS D+ELLR++Q LS
Sbjct 7 EDSGTAVYVISVAAELSGMHAQTLRTYDRMGLVSPARTRGGGRRYSDRDIELLRKIQALS 66
Query 66 QDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLR--ANQRR-----EVAVVPKSTA 118
QD+GVNLAGIK IIELT + + L++ +AEE+ LR A RR E+ VP+ST+
Sbjct 67 QDDGVNLAGIKSIIELTEERDRLEAERDALAEEVRALREQAAGRRPRRSGELVHVPRSTS 126
Query 119 LVVWKPR 125
+V+W PR
Sbjct 127 VVMWSPR 133
>gi|311740457|ref|ZP_07714285.1| transcriptional regulator HspR [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311304503|gb|EFQ80578.1| transcriptional regulator HspR [Corynebacterium pseudogenitalium
ATCC 33035]
Length=149
Score = 143 bits (360), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 75/127 (60%), Positives = 96/127 (76%), Gaps = 7/127 (5%)
Query 6 KDGESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQVQHLS 65
+D + ++ISVAAEL+GMHAQTLRTYDR+GLVSP RT GGGRRYS D+ELLR++Q LS
Sbjct 7 EDSGTAVYVISVAAELSGMHAQTLRTYDRMGLVSPARTRGGGRRYSDRDIELLRKIQALS 66
Query 66 QDEGVNLAGIKRIIELTSQVEALQSRLQEMAEELAVLR--ANQRR-----EVAVVPKSTA 118
QD+GVNLAGIK IIELT + + L++ +AEE+ LR A RR E+ VP+ST+
Sbjct 67 QDDGVNLAGIKSIIELTEERDRLEAERDALAEEVRTLREQAAGRRPQRSGELVHVPRSTS 126
Query 119 LVVWKPR 125
+V+W PR
Sbjct 127 VVMWSPR 133
>gi|328883477|emb|CCA56716.1| HspR, transcriptional repressor of DnaK operon [Streptomyces
venezuelae ATCC 10712]
Length=147
Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/140 (57%), Positives = 101/140 (73%), Gaps = 16/140 (11%)
Query 3 KNPKD--GESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQ 60
+NP + ES ++ISVAA+L+G+H QTLR YDRLGLVSP RT+G GRRYS D+ELLRQ
Sbjct 6 RNPYELTDESPVYVISVAAQLSGLHPQTLRQYDRLGLVSPDRTAGRGRRYSARDIELLRQ 65
Query 61 VQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQE-----------MAEELAVLRANQRRE 109
VQ LSQDEG+NLAGIKRIIEL +QV ALQSR+ E M + A + A+ RR+
Sbjct 66 VQQLSQDEGINLAGIKRIIELENQVAALQSRIAELSAAVDGAAAAMRQREAQVHASYRRD 125
Query 110 VAV---VPKSTALVVWKPRR 126
+ V +++ALVVW+P+R
Sbjct 126 LVPYQDVQQASALVVWRPKR 145
>gi|337767302|emb|CCB76013.1| putative heat shock protein hspR [Streptomyces cattleya NRRL
8057]
Length=149
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/140 (55%), Positives = 101/140 (73%), Gaps = 16/140 (11%)
Query 3 KNPKD--GESRTFLISVAAELAGMHAQTLRTYDRLGLVSPRRTSGGGRRYSLHDVELLRQ 60
+NP + ES ++ISVAA+L+G+H QTLR YDRLGLVSP RT+G GRRYS D++LLRQ
Sbjct 8 RNPYELTDESPVYVISVAAQLSGLHPQTLRQYDRLGLVSPDRTAGRGRRYSARDIQLLRQ 67
Query 61 VQHLSQDEGVNLAGIKRIIELTSQVEALQSRLQEMAEEL-----------AVLRANQRRE 109
VQ LSQDEG+NLAGIKRIIEL +QV ALQ+R+ E+ L A + A+ RR+
Sbjct 68 VQQLSQDEGINLAGIKRIIELENQVAALQARIAELEATLDGAAAAMRQREAAVHASYRRD 127
Query 110 VAV---VPKSTALVVWKPRR 126
+ V +++ALVVW+P+R
Sbjct 128 LVPYQDVQQTSALVVWRPKR 147
Lambda K H
0.317 0.131 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129836892488
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40