BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0358
Length=215
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607499|ref|NP_214872.1| hypothetical protein Rv0358 [Mycoba... 414 4e-114
gi|289744055|ref|ZP_06503433.1| conserved hypothetical protein [... 412 2e-113
gi|289748842|ref|ZP_06508220.1| conserved hypothetical protein [... 305 2e-81
gi|183980704|ref|YP_001848995.1| hypothetical protein MMAR_0679 ... 269 2e-70
gi|118618260|ref|YP_906592.1| hypothetical protein MUL_2835 [Myc... 264 7e-69
gi|306806164|ref|ZP_07442832.1| hypothetical protein TMGG_03365 ... 263 9e-69
gi|306782986|ref|ZP_07421308.1| hypothetical protein TMCG_03043 ... 257 7e-67
gi|240173049|ref|ZP_04751707.1| hypothetical protein MkanA1_2730... 254 4e-66
gi|306787354|ref|ZP_07425676.1| hypothetical protein TMDG_02553 ... 244 7e-63
gi|15827059|ref|NP_301322.1| hypothetical protein ML0281 [Mycoba... 229 2e-58
gi|41409965|ref|NP_962801.1| hypothetical protein MAP3867c [Myco... 229 2e-58
gi|118465815|ref|YP_883907.1| hypothetical protein MAV_4780 [Myc... 228 4e-58
gi|306801953|ref|ZP_07438621.1| hypothetical protein TMHG_03371 ... 227 9e-58
gi|342859132|ref|ZP_08715786.1| hypothetical protein MCOL_09648 ... 224 9e-57
gi|336460393|gb|EGO39293.1| hypothetical protein MAPs_41910 [Myc... 223 1e-56
gi|306796093|ref|ZP_07434395.1| hypothetical protein TMFG_01649 ... 212 3e-53
gi|306779199|ref|ZP_07417536.1| hypothetical protein TMBG_03589 ... 199 3e-49
gi|333989002|ref|YP_004521616.1| hypothetical protein JDM601_036... 187 9e-46
gi|306801952|ref|ZP_07438620.1| hypothetical protein TMHG_03370 ... 182 4e-44
gi|54027348|ref|YP_121590.1| hypothetical protein nfa53740 [Noca... 179 3e-43
gi|289748841|ref|ZP_06508219.1| hypothetical protein TBDG_01385 ... 179 4e-43
gi|120401691|ref|YP_951520.1| hypothetical protein Mvan_0676 [My... 176 3e-42
gi|169631328|ref|YP_001704977.1| hypothetical protein MAB_4250 [... 172 2e-41
gi|108797494|ref|YP_637691.1| hypothetical protein Mmcs_0514 [My... 172 4e-41
gi|315442212|ref|YP_004075091.1| hypothetical protein Mspyr1_054... 170 1e-40
gi|145220834|ref|YP_001131512.1| hypothetical protein Mflv_0229 ... 170 1e-40
gi|118473507|ref|YP_885164.1| hypothetical protein MSMEG_0758 [M... 167 1e-39
gi|306782985|ref|ZP_07421307.1| hypothetical protein TMCG_03042 ... 164 6e-39
gi|325673879|ref|ZP_08153569.1| hypothetical protein HMPREF0724_... 164 6e-39
gi|312141287|ref|YP_004008623.1| hypothetical protein REQ_39610 ... 163 1e-38
gi|226365029|ref|YP_002782812.1| hypothetical protein ROP_56200 ... 162 2e-38
gi|111022516|ref|YP_705488.1| hypothetical protein RHA1_ro05550 ... 160 8e-38
gi|226304916|ref|YP_002764874.1| hypothetical protein RER_14270 ... 158 5e-37
gi|229493093|ref|ZP_04386888.1| conserved hypothetical protein [... 157 1e-36
gi|306779198|ref|ZP_07417535.1| hypothetical protein TMBG_03588 ... 157 1e-36
gi|333918182|ref|YP_004491763.1| hypothetical protein AS9A_0506 ... 147 8e-34
gi|262203906|ref|YP_003275114.1| hypothetical protein Gbro_4055 ... 139 4e-31
gi|343928560|ref|ZP_08768007.1| hypothetical protein GOALK_118_0... 137 1e-30
gi|319949322|ref|ZP_08023397.1| hypothetical protein ES5_07846 [... 133 2e-29
gi|306796092|ref|ZP_07434394.1| hypothetical protein TMFG_01648 ... 133 2e-29
gi|296138253|ref|YP_003645496.1| hypothetical protein Tpau_0516 ... 118 7e-25
gi|326384110|ref|ZP_08205793.1| hypothetical protein SCNU_14304 ... 114 7e-24
gi|289744054|ref|ZP_06503432.1| conserved hypothetical protein [... 103 2e-20
gi|296394027|ref|YP_003658911.1| hypothetical protein Srot_1619 ... 102 5e-20
gi|324997903|ref|ZP_08119015.1| hypothetical protein PseP1_04019... 97.4 1e-18
gi|296119021|ref|ZP_06837594.1| conserved hypothetical protein [... 93.6 2e-17
gi|25029154|ref|NP_739208.1| hypothetical protein CE2598 [Coryne... 92.8 3e-17
gi|259505851|ref|ZP_05748753.1| conserved hypothetical protein [... 92.8 3e-17
gi|254777217|ref|ZP_05218733.1| hypothetical protein MaviaA2_214... 92.4 4e-17
gi|134103596|ref|YP_001109257.1| hypothetical protein SACE_7174 ... 88.2 7e-16
>gi|15607499|ref|NP_214872.1| hypothetical protein Rv0358 [Mycobacterium tuberculosis H37Rv]
gi|15839744|ref|NP_334781.1| hypothetical protein MT0374 [Mycobacterium tuberculosis CDC1551]
gi|31791535|ref|NP_854028.1| hypothetical protein Mb0365 [Mycobacterium bovis AF2122/97]
61 more sequence titles
Length=215
Score = 414 bits (1065), Expect = 4e-114, Method: Compositional matrix adjust.
Identities = 215/215 (100%), Positives = 215/215 (100%), Gaps = 0/215 (0%)
Query 1 MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADADLGAVLTRL 60
MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADADLGAVLTRL
Sbjct 1 MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADADLGAVLTRL 60
Query 61 LRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQ 120
LRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQ
Sbjct 61 LRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQ 120
Query 121 WLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAGKWRRWIGGRAAQ 180
WLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAGKWRRWIGGRAAQ
Sbjct 121 WLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAGKWRRWIGGRAAQ 180
Query 181 LGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
LGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR
Sbjct 181 LGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
>gi|289744055|ref|ZP_06503433.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289684583|gb|EFD52071.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=215
Score = 412 bits (1059), Expect = 2e-113, Method: Compositional matrix adjust.
Identities = 214/215 (99%), Positives = 214/215 (99%), Gaps = 0/215 (0%)
Query 1 MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADADLGAVLTRL 60
MYT ENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADADLGAVLTRL
Sbjct 1 MYTPENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADADLGAVLTRL 60
Query 61 LRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQ 120
LRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQ
Sbjct 61 LRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQ 120
Query 121 WLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAGKWRRWIGGRAAQ 180
WLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAGKWRRWIGGRAAQ
Sbjct 121 WLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAGKWRRWIGGRAAQ 180
Query 181 LGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
LGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR
Sbjct 181 LGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
>gi|289748842|ref|ZP_06508220.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289689429|gb|EFD56858.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=192
Score = 305 bits (782), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/186 (96%), Positives = 179/186 (97%), Gaps = 0/186 (0%)
Query 30 HQDNLDTVIGRYSRLIVVGADADLGAVLTRLLRTDRLDVEVGYVPRRRSPATRAYRLPAG 89
HQ +DTVIG R IVVGA+ADLGAVLTRLLRTDRLDVEVGYVPRRRSPATRAYRLPAG
Sbjct 7 HQGKIDTVIGWNPRFIVVGANADLGAVLTRLLRTDRLDVEVGYVPRRRSPATRAYRLPAG 66
Query 90 RRAARRARCGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGV 149
RRAARRARCGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGV
Sbjct 67 RRAARRARCGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGV 126
Query 150 CIEPTLTLPGLRAAVDGAGKWRRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVE 209
CIEPTL LPGLRAAVDGAGKWRRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVE
Sbjct 127 CIEPTLALPGLRAAVDGAGKWRRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVE 186
Query 210 GWLLVR 215
GWLLVR
Sbjct 187 GWLLVR 192
>gi|183980704|ref|YP_001848995.1| hypothetical protein MMAR_0679 [Mycobacterium marinum M]
gi|183174030|gb|ACC39140.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=225
Score = 269 bits (687), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/217 (70%), Positives = 171/217 (79%), Gaps = 4/217 (1%)
Query 3 TAENAPGVAVLLSGDADVPGPLTGLPTHQ----DNLDTVIGRYSRLIVVGADADLGAVLT 58
+A N P +AVL+ VP PLTGLPTHQ ++D + Y RL V+G DADL AVLT
Sbjct 9 SAANTPSMAVLVFDGQAVPAPLTGLPTHQVGDSASIDAALAAYPRLAVIGDDADLAAVLT 68
Query 59 RLLRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGR 118
RLLRTDRLD+EV YVPRRR+ ATR YRL AGRR A RAR G A RVPLIRDET +VIVGR
Sbjct 69 RLLRTDRLDIEVAYVPRRRTTATRVYRLAAGRRGAWRARRGSAGRVPLIRDETATVIVGR 128
Query 119 AQWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAGKWRRWIGGRA 178
A+WLPA+++ IHGEAVVDD LFDGD+AGV I+PTL LPGLRAA+ WRRWIGGRA
Sbjct 129 ARWLPADDEQTIHGEAVVDDNTLFDGDIAGVYIQPTLELPGLRAALHERRPWRRWIGGRA 188
Query 179 AQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
AQLGT+GA V+RDG+ APR VRRSTFYRNVEGWLLVR
Sbjct 189 AQLGTSGARVIRDGIPAPRAVRRSTFYRNVEGWLLVR 225
>gi|118618260|ref|YP_906592.1| hypothetical protein MUL_2835 [Mycobacterium ulcerans Agy99]
gi|118570370|gb|ABL05121.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=225
Score = 264 bits (674), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 148/217 (69%), Positives = 169/217 (78%), Gaps = 4/217 (1%)
Query 3 TAENAPGVAVLLSGDADVPGPLTGLPTHQ----DNLDTVIGRYSRLIVVGADADLGAVLT 58
+A N P +AVL+ VP LTGLPTHQ ++D + Y RL V+G DADL A+LT
Sbjct 9 SAANTPSMAVLVFDGQAVPAALTGLPTHQVGDSASIDAALAAYPRLAVIGGDADLAAMLT 68
Query 59 RLLRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGR 118
RLLRTDRLD+EV YVPRRR+ ATR YRL AGRR A RAR G A RVPLIRDET +VIVGR
Sbjct 69 RLLRTDRLDIEVAYVPRRRTTATRVYRLAAGRRGAWRARRGSAGRVPLIRDETATVIVGR 128
Query 119 AQWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAGKWRRWIGGRA 178
A+WLPA+++ IHGEAVVDD LFDGD+AGV I+PTL LPGLRAA+ WRRWIGGRA
Sbjct 129 ARWLPADDEQTIHGEAVVDDNTLFDGDIAGVYIQPTLELPGLRAALHERRPWRRWIGGRA 188
Query 179 AQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
AQLGT+GA V+RDG+ PR VRRSTFYRNVEGWLLVR
Sbjct 189 AQLGTSGARVIRDGIPTPRAVRRSTFYRNVEGWLLVR 225
>gi|306806164|ref|ZP_07442832.1| hypothetical protein TMGG_03365 [Mycobacterium tuberculosis SUMu007]
gi|308347310|gb|EFP36161.1| hypothetical protein TMGG_03365 [Mycobacterium tuberculosis SUMu007]
Length=136
Score = 263 bits (673), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 136/136 (100%), Positives = 136/136 (100%), Gaps = 0/136 (0%)
Query 80 ATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDT 139
ATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDT
Sbjct 1 ATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDT 60
Query 140 VLFDGDVAGVCIEPTLTLPGLRAAVDGAGKWRRWIGGRAAQLGTTGAAVLRDGVAAPRPV 199
VLFDGDVAGVCIEPTLTLPGLRAAVDGAGKWRRWIGGRAAQLGTTGAAVLRDGVAAPRPV
Sbjct 61 VLFDGDVAGVCIEPTLTLPGLRAAVDGAGKWRRWIGGRAAQLGTTGAAVLRDGVAAPRPV 120
Query 200 RRSTFYRNVEGWLLVR 215
RRSTFYRNVEGWLLVR
Sbjct 121 RRSTFYRNVEGWLLVR 136
>gi|306782986|ref|ZP_07421308.1| hypothetical protein TMCG_03043 [Mycobacterium tuberculosis SUMu003]
gi|308332153|gb|EFP21004.1| hypothetical protein TMCG_03043 [Mycobacterium tuberculosis SUMu003]
Length=132
Score = 257 bits (657), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 132/132 (100%), Positives = 132/132 (100%), Gaps = 0/132 (0%)
Query 84 YRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFD 143
YRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFD
Sbjct 1 YRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFD 60
Query 144 GDVAGVCIEPTLTLPGLRAAVDGAGKWRRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRST 203
GDVAGVCIEPTLTLPGLRAAVDGAGKWRRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRST
Sbjct 61 GDVAGVCIEPTLTLPGLRAAVDGAGKWRRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRST 120
Query 204 FYRNVEGWLLVR 215
FYRNVEGWLLVR
Sbjct 121 FYRNVEGWLLVR 132
>gi|240173049|ref|ZP_04751707.1| hypothetical protein MkanA1_27301 [Mycobacterium kansasii ATCC
12478]
Length=215
Score = 254 bits (650), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 156/216 (73%), Positives = 171/216 (80%), Gaps = 2/216 (0%)
Query 1 MYTAENAPGVAVLLSGDADVPGPLTGLPTHQ-DNLDTVIGRYSRLIVVGADADLGAVLTR 59
M+ P AVL+ D VP L GLPT + D+L+T +G Y RL+V G DADL VLTR
Sbjct 1 MHIRVKPPSTAVLVFDDRPVPAALAGLPTRRADDLETALGSYRRLVVFGGDADLATVLTR 60
Query 60 LLRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRA 119
LLR DRLD+EVGY P RR+ ATR YRLPAGRRAARRAR G ARRVPLIRDETG+VIVGRA
Sbjct 61 LLRADRLDIEVGYAPPRRTRATRVYRLPAGRRAARRARRGTARRVPLIRDETGTVIVGRA 120
Query 120 QWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAGKWRRWIGGRAA 179
WLP + LI GEAVVDDTVLFDGDVAGV IEPT LPGLRAA+D G WRRWI GRAA
Sbjct 121 GWLPPDRARLIRGEAVVDDTVLFDGDVAGVFIEPTPGLPGLRAALD-TGPWRRWISGRAA 179
Query 180 QLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
QLGTTGA+V+RDGVAAPR VRRS FYR+VEGWLLVR
Sbjct 180 QLGTTGASVVRDGVAAPRSVRRSAFYRHVEGWLLVR 215
>gi|306787354|ref|ZP_07425676.1| hypothetical protein TMDG_02553 [Mycobacterium tuberculosis SUMu004]
gi|308335941|gb|EFP24792.1| hypothetical protein TMDG_02553 [Mycobacterium tuberculosis SUMu004]
Length=125
Score = 244 bits (622), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%)
Query 91 RAARRARCGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGVC 150
RAARRARCGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGVC
Sbjct 1 RAARRARCGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGVC 60
Query 151 IEPTLTLPGLRAAVDGAGKWRRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEG 210
IEPTLTLPGLRAAVDGAGKWRRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEG
Sbjct 61 IEPTLTLPGLRAAVDGAGKWRRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEG 120
Query 211 WLLVR 215
WLLVR
Sbjct 121 WLLVR 125
>gi|15827059|ref|NP_301322.1| hypothetical protein ML0281 [Mycobacterium leprae TN]
gi|221229537|ref|YP_002502953.1| hypothetical protein MLBr_00281 [Mycobacterium leprae Br4923]
gi|3129994|emb|CAA18945.1| hypothetical protein MLCB4.24 [Mycobacterium leprae]
gi|13092607|emb|CAC29789.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219932644|emb|CAR70374.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=229
Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/229 (63%), Positives = 165/229 (73%), Gaps = 14/229 (6%)
Query 1 MYTAENAPGVAVLLSGDADVP---GPLTGLPTHQ-------DNLDTVIGRYSRLIVVGAD 50
M T+++APGVAVLL GD LT L T++ D++D IG Y RL+VVG D
Sbjct 1 MNTSDSAPGVAVLLFGDDRTRQRWNTLTALSTYRAGGPDDIDSIDATIGPYRRLVVVGGD 60
Query 51 ADLGAVLTRLLRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDE 110
DL AVL RLLR DRLD+EV YVP +R+ ATR YRLP GRRAARRAR G A RVPLIRDE
Sbjct 61 GDLAAVLGRLLRADRLDIEVAYVPHQRTAATRVYRLPTGRRAARRARRGYATRVPLIRDE 120
Query 111 TGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVD----G 166
TGSVIVGRA WLP ++ +HGEA+VDD LFDGDVAGV I PTL +PGLRA + G
Sbjct 121 TGSVIVGRADWLPVVDRQPLHGEAIVDDIPLFDGDVAGVRIAPTLAMPGLRARLHTSRTG 180
Query 167 AGKWRRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
G W RW+ GRA QLG+TG AV+RDGV R RRSTFYRNVEGW+LVR
Sbjct 181 IGIWSRWLTGRAVQLGSTGVAVVRDGVPTRRRERRSTFYRNVEGWMLVR 229
>gi|41409965|ref|NP_962801.1| hypothetical protein MAP3867c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398798|gb|AAS06417.1| hypothetical protein MAP_3867c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=231
Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/209 (68%), Positives = 154/209 (74%), Gaps = 5/209 (2%)
Query 11 AVLLSGDADVPGPLTGLPTHQ----DNLDTVIGRYSRLIVVGADADLGAVLTRLLRTDRL 66
AVL G PL G+PTH+ ++D IG Y RLIV+G DA+L VLTRLLR +RL
Sbjct 24 AVLQFGRRHGYRPLRGMPTHRVAGDTDVDAAIGPYRRLIVLGGDAELALVLTRLLRAERL 83
Query 67 DVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQWLPAEE 126
DVEV YVPRRR+ ATR YRLP G RAARRA G ARRVPLIRDETGS IVGRA W
Sbjct 84 DVEVAYVPRRRTRATRNYRLPTGFRAARRAARGAARRVPLIRDETGSAIVGRACWAAPGG 143
Query 127 QALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAGKWRRWIGGRAAQLGTTGA 186
Q +HGEAVVDDT LFDGDV V IEPT +PGLRAAV G WRRW+ GRAAQLG+TGA
Sbjct 144 QRWLHGEAVVDDTTLFDGDVTAVWIEPTAAMPGLRAAVAGR-PWRRWVTGRAAQLGSTGA 202
Query 187 AVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
VLRDGV A RP RRS FYRN+EGWLLVR
Sbjct 203 TVLRDGVPAARPARRSAFYRNIEGWLLVR 231
>gi|118465815|ref|YP_883907.1| hypothetical protein MAV_4780 [Mycobacterium avium 104]
gi|118167102|gb|ABK67999.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=216
Score = 228 bits (581), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 136/197 (70%), Positives = 150/197 (77%), Gaps = 5/197 (2%)
Query 23 PLTGLPTHQ----DNLDTVIGRYSRLIVVGADADLGAVLTRLLRTDRLDVEVGYVPRRRS 78
PL G+PTH+ ++D IG Y RLIV+G DA+L VLTRLLR +RLDVEV +VPRRR+
Sbjct 21 PLRGMPTHRVAGDTDVDAAIGPYRRLIVLGGDAELALVLTRLLRAERLDVEVAFVPRRRT 80
Query 79 PATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDD 138
ATR YRLP G RAARRA G ARRVPLIRDETGS IVGRA W Q +HGEAVVDD
Sbjct 81 RATRNYRLPTGFRAARRAARGAARRVPLIRDETGSAIVGRACWAAPGGQGWLHGEAVVDD 140
Query 139 TVLFDGDVAGVCIEPTLTLPGLRAAVDGAGKWRRWIGGRAAQLGTTGAAVLRDGVAAPRP 198
T LFDGDV V IEPT +PGLRAAV G WRRW+ GRAAQLG+TGA VLRDGV A RP
Sbjct 141 TTLFDGDVTAVWIEPTAAMPGLRAAVAGR-PWRRWVTGRAAQLGSTGATVLRDGVPADRP 199
Query 199 VRRSTFYRNVEGWLLVR 215
RRS FYRN+EGWLLVR
Sbjct 200 ARRSAFYRNIEGWLLVR 216
>gi|306801953|ref|ZP_07438621.1| hypothetical protein TMHG_03371 [Mycobacterium tuberculosis SUMu008]
gi|308351255|gb|EFP40106.1| hypothetical protein TMHG_03371 [Mycobacterium tuberculosis SUMu008]
Length=116
Score = 227 bits (579), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 116/116 (100%), Positives = 116/116 (100%), Gaps = 0/116 (0%)
Query 100 VARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPG 159
VARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPG
Sbjct 1 VARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPG 60
Query 160 LRAAVDGAGKWRRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
LRAAVDGAGKWRRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR
Sbjct 61 LRAAVDGAGKWRRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 116
>gi|342859132|ref|ZP_08715786.1| hypothetical protein MCOL_09648 [Mycobacterium colombiense CECT
3035]
gi|342133373|gb|EGT86576.1| hypothetical protein MCOL_09648 [Mycobacterium colombiense CECT
3035]
Length=199
Score = 224 bits (570), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 136/198 (69%), Positives = 154/198 (78%), Gaps = 7/198 (3%)
Query 24 LTGLPTH----QDNLDTVIGRYSRLIVVGADADLGAVLTRLLRTDRLDVEVGYVPRRRSP 79
+ G+ TH + ++D IG Y RLIV+G DA+L AVLTRLLR +RLD+EV YVPRRR+
Sbjct 1 MRGIQTHRVVDETDIDAAIGPYRRLIVLGGDAELAAVLTRLLRAERLDIEVAYVPRRRTR 60
Query 80 ATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDT 139
ATR YRLPAG RAA RAR G ARRV LIRDETGSV+VGRA W+PA+ IHGEAVVDDT
Sbjct 61 ATRVYRLPAGFRAALRARRGAARRVTLIRDETGSVVVGRAGWVPADGARSIHGEAVVDDT 120
Query 140 VLFDGDVAGVCIEPTLTLPGLRAAVDGAG---KWRRWIGGRAAQLGTTGAAVLRDGVAAP 196
LFDGDV GV +EP PGLRAAV G G W RW+ GRAAQLG+TGAAV+RDGVAAP
Sbjct 121 TLFDGDVEGVWVEPIPAAPGLRAAVAGRGLGRPWPRWVTGRAAQLGSTGAAVVRDGVAAP 180
Query 197 RPVRRSTFYRNVEGWLLV 214
R VRRS FYRN+EGWLLV
Sbjct 181 RAVRRSAFYRNIEGWLLV 198
>gi|336460393|gb|EGO39293.1| hypothetical protein MAPs_41910 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=192
Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/193 (70%), Positives = 147/193 (77%), Gaps = 5/193 (2%)
Query 27 LPTHQ----DNLDTVIGRYSRLIVVGADADLGAVLTRLLRTDRLDVEVGYVPRRRSPATR 82
+PTH+ ++D IG Y RLIV+G DA+L VLTRLLR +RLDVEV YVPRRR+ ATR
Sbjct 1 MPTHRVAGDTDVDAAIGPYRRLIVLGGDAELALVLTRLLRAERLDVEVAYVPRRRTRATR 60
Query 83 AYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLF 142
YRLP G RAARRA G ARRVPLIRDETGS IVGRA W Q +HGEAVVDDT LF
Sbjct 61 NYRLPTGFRAARRAARGAARRVPLIRDETGSAIVGRACWAAPGGQRWLHGEAVVDDTTLF 120
Query 143 DGDVAGVCIEPTLTLPGLRAAVDGAGKWRRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRS 202
DGDV V IEPT +PGLRAAV G WRRW+ GRAAQLG+TGA VLRDGV A RP RRS
Sbjct 121 DGDVTAVWIEPTAAMPGLRAAVAGR-PWRRWVTGRAAQLGSTGATVLRDGVPAARPARRS 179
Query 203 TFYRNVEGWLLVR 215
FYRN+EGWLLVR
Sbjct 180 AFYRNIEGWLLVR 192
>gi|306796093|ref|ZP_07434395.1| hypothetical protein TMFG_01649 [Mycobacterium tuberculosis SUMu006]
gi|308343418|gb|EFP32269.1| hypothetical protein TMFG_01649 [Mycobacterium tuberculosis SUMu006]
Length=107
Score = 212 bits (539), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/107 (100%), Positives = 107/107 (100%), Gaps = 0/107 (0%)
Query 109 DETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAG 168
DETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAG
Sbjct 1 DETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAG 60
Query 169 KWRRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
KWRRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR
Sbjct 61 KWRRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 107
>gi|306779199|ref|ZP_07417536.1| hypothetical protein TMBG_03589 [Mycobacterium tuberculosis SUMu002]
gi|308327799|gb|EFP16650.1| hypothetical protein TMBG_03589 [Mycobacterium tuberculosis SUMu002]
Length=100
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/100 (100%), Positives = 100/100 (100%), Gaps = 0/100 (0%)
Query 116 VGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAGKWRRWIG 175
VGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAGKWRRWIG
Sbjct 1 VGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAGKWRRWIG 60
Query 176 GRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
GRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR
Sbjct 61 GRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 100
>gi|333989002|ref|YP_004521616.1| hypothetical protein JDM601_0362 [Mycobacterium sp. JDM601]
gi|333484970|gb|AEF34362.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=191
Score = 187 bits (475), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 112/179 (63%), Positives = 130/179 (73%), Gaps = 1/179 (0%)
Query 38 IGRYSRLIVVGADADLGAVLTRLLRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRAR 97
I + RL+VVG DADL VLTRLLR+DRLDVE+GY P RR+PATRAYRLPAG AARRAR
Sbjct 13 IEHFHRLVVVGDDADLARVLTRLLRSDRLDVELGYAPLRRTPATRAYRLPAGWWAARRAR 72
Query 98 CGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTL 157
G A VPLIRD+ G+ + G +WLP + + GE +VDD LFDGDVA V IEP
Sbjct 73 HGTAGPVPLIRDDAGTALAGAGRWLPVDGAETLRGEGIVDDAALFDGDVAEVLIEPIGAA 132
Query 158 PGLRA-AVDGAGKWRRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
PGLRA + RRW+ GRAAQLGTTGA V+RDGV R V+RSTFYR+V+ WLLVR
Sbjct 133 PGLRAGVPGRRRRVRRWVTGRAAQLGTTGALVVRDGVYGTRTVKRSTFYRHVDDWLLVR 191
>gi|306801952|ref|ZP_07438620.1| hypothetical protein TMHG_03370 [Mycobacterium tuberculosis SUMu008]
gi|308351303|gb|EFP40154.1| hypothetical protein TMHG_03370 [Mycobacterium tuberculosis SUMu008]
Length=94
Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/94 (100%), Positives = 94/94 (100%), Gaps = 0/94 (0%)
Query 1 MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADADLGAVLTRL 60
MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADADLGAVLTRL
Sbjct 1 MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADADLGAVLTRL 60
Query 61 LRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAAR 94
LRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAAR
Sbjct 61 LRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAAR 94
>gi|54027348|ref|YP_121590.1| hypothetical protein nfa53740 [Nocardia farcinica IFM 10152]
gi|54018856|dbj|BAD60226.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=224
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/217 (53%), Positives = 136/217 (63%), Gaps = 14/217 (6%)
Query 12 VLLSGDADVPGPLTGLPTHQ----------DNLDTVIGRYS--RLIVVGADADLGAVLTR 59
VL A VP L LPT Q D L V+ S RLIV+G DA L AVLT
Sbjct 9 VLRCDGAPVPIALAALPTTQTAAIPDPAVVDELLPVLAADSLPRLIVLGEDAALAAVLTH 68
Query 60 LLRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRA 119
L++T+RL VE+GYVP R+ RAY + +G AA+RA G A PLIRD+TG V+VGRA
Sbjct 69 LMKTERLHVEIGYVPIDRTYGARAYEIGSGNSAAKRAIEGKATATPLIRDDTGKVLVGRA 128
Query 120 QWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVD-GAGKWRRWIGGRA 178
+ E A + GEA VDDT+LF G V + I PTL +PG+RAA G + RRW+ GRA
Sbjct 129 T-ITGPEGAKLDGEAYVDDTLLFTGRVTAMHISPTLHMPGVRAAAQRGVLRKRRWVEGRA 187
Query 179 AQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
AQLGT GA V RDG+ RPV RSTFYR+ E WLLVR
Sbjct 188 AQLGTPGAVVTRDGIRTTRPVPRSTFYRHHEPWLLVR 224
>gi|289748841|ref|ZP_06508219.1| hypothetical protein TBDG_01385 [Mycobacterium tuberculosis T92]
gi|289689428|gb|EFD56857.1| hypothetical protein TBDG_01385 [Mycobacterium tuberculosis T92]
Length=92
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/92 (100%), Positives = 92/92 (100%), Gaps = 0/92 (0%)
Query 1 MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADADLGAVLTRL 60
MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADADLGAVLTRL
Sbjct 1 MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADADLGAVLTRL 60
Query 61 LRTDRLDVEVGYVPRRRSPATRAYRLPAGRRA 92
LRTDRLDVEVGYVPRRRSPATRAYRLPAGRRA
Sbjct 61 LRTDRLDVEVGYVPRRRSPATRAYRLPAGRRA 92
>gi|120401691|ref|YP_951520.1| hypothetical protein Mvan_0676 [Mycobacterium vanbaalenii PYR-1]
gi|119954509|gb|ABM11514.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=200
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/207 (54%), Positives = 128/207 (62%), Gaps = 17/207 (8%)
Query 10 VAVLLSGDADVPGPLTGLPTHQD-NLDTVIGRYSRLIVVGADADLGAVLTRLLRTDRLDV 68
VA++ G VP L LP + D ++G Y RL+VVG DL VLTRLLR DRLD+
Sbjct 6 VAIVRLGQRRVPRALRDLPVLDSADADGLVG-YRRLVVVGTHRDLSQVLTRLLRADRLDI 64
Query 69 EVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQWLPAEEQA 128
EV +V R P RR R A RVPLIRDETG+VI A WL Q
Sbjct 65 EVAHV---RHPWQ-----------GRRTRTQAATRVPLIRDETGAVITEAALWLAPAGQR 110
Query 129 LIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAV-DGAGKWRRWIGGRAAQLGTTGAA 187
+ GEAVVDD LFDG+V GV +EPT +PGLRA V G + +RWI GRAAQLGTTG
Sbjct 111 TLRGEAVVDDERLFDGEVTGVRVEPTAAMPGLRAGVFSGRARPKRWISGRAAQLGTTGTL 170
Query 188 VLRDGVAAPRPVRRSTFYRNVEGWLLV 214
V+RDGV RPVRRSTFYR+ EGWL V
Sbjct 171 VVRDGVPGKRPVRRSTFYRHTEGWLRV 197
>gi|169631328|ref|YP_001704977.1| hypothetical protein MAB_4250 [Mycobacterium abscessus ATCC 19977]
gi|169243295|emb|CAM64323.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=223
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/214 (55%), Positives = 145/214 (68%), Gaps = 14/214 (6%)
Query 12 VLLSGDADVPGPLTGLPTHQDN--------LDTVIGRYSRLIVVGADADLGAVLTRLLRT 63
VLL G +P L LP + + +D + +R IVVG D DLG VLTRL+R
Sbjct 14 VLLFGTRRLPRILRDLPVDRVDGSGAVRALVDALPDGPARFIVVGGDGDLGQVLTRLMRA 73
Query 64 DRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQWLP 123
+RLDVE+G+VP R S A R YR+ G AARRAR G A+RVPLIRD+TG+ + GRA W
Sbjct 74 ERLDVELGFVPDRPSRARRIYRI--GFGAARRARRGRAQRVPLIRDDTGTALAGRASW-Q 130
Query 124 AEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAGKW--RRWIGGRAAQL 181
+ + + GEA VDDT+LFDG A V +EPT ++PGLRA+V G + RRW+ GRAAQL
Sbjct 131 SSDGTPVTGEATVDDTLLFDG-AALVDVEPTESMPGLRASVRGRTRLLPRRWVTGRAAQL 189
Query 182 GTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
GT GA V+RDGVA PRPV RSTFYR+ + WLLVR
Sbjct 190 GTVGAVVVRDGVAGPRPVTRSTFYRHQQSWLLVR 223
>gi|108797494|ref|YP_637691.1| hypothetical protein Mmcs_0514 [Mycobacterium sp. MCS]
gi|119866579|ref|YP_936531.1| hypothetical protein Mkms_0525 [Mycobacterium sp. KMS]
gi|126433115|ref|YP_001068806.1| hypothetical protein Mjls_0503 [Mycobacterium sp. JLS]
gi|108767913|gb|ABG06635.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119692668|gb|ABL89741.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126232915|gb|ABN96315.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=208
Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/216 (53%), Positives = 133/216 (62%), Gaps = 21/216 (9%)
Query 4 AENAPGVAVLLSGDADVPGPLTGLPT----HQDNLDTVIGRYSRLIVVGADADLGAVLTR 59
A G+ VL G P LTGL T ++D RL+VVG+DADL VLTR
Sbjct 8 AGGGDGMVVLRFGGHRAPRGLTGLDTVDVTGAPDVDAAAAGARRLVVVGSDADLATVLTR 67
Query 60 LLRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRA 119
L+RT+RL VE+ A R PA R A G ARRVPLIRD+ G +VG A
Sbjct 68 LMRTERLGVEL--------AAARGL-FPA-----RTALSGTARRVPLIRDDAGIALVGSA 113
Query 120 QWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAV-DGAGKWRRWIGGRA 178
QW E + GEAVVDDT LF G+VAGV IEPT +PGLRAAV G G+ +RW+ GRA
Sbjct 114 QWRGTE--GALFGEAVVDDTTLFSGEVAGVRIEPTAEMPGLRAAVLSGRGRPQRWVAGRA 171
Query 179 AQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLV 214
AQLGTTGA V+RDGV R V+RSTFYR+ EGWL V
Sbjct 172 AQLGTTGARVVRDGVEGTREVKRSTFYRHTEGWLRV 207
>gi|315442212|ref|YP_004075091.1| hypothetical protein Mspyr1_05470 [Mycobacterium sp. Spyr1]
gi|315260515|gb|ADT97256.1| hypothetical protein Mspyr1_05470 [Mycobacterium sp. Spyr1]
Length=203
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/210 (55%), Positives = 134/210 (64%), Gaps = 20/210 (9%)
Query 10 VAVLLSGDADVPGPLTGLP----THQDNLDTVIGRYSRLIVVGADADLGAVLTRLLRTDR 65
+AV+ G VP L LP T D D + G Y RL+VVG+D DL AVLT+LLR DR
Sbjct 6 IAVVRPGARRVPRSLRDLPVLPGTGSDLSDDITG-YRRLLVVGSDRDLSAVLTKLLRADR 64
Query 66 LDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQWLPAE 125
LD+EV ++ AAR AR A RVPLIRDETG+VI G A WLP +
Sbjct 65 LDIEVAHL--------------RRPWAARAARTAPAGRVPLIRDETGTVIAGAALWLPPD 110
Query 126 EQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAV-DGAGKWRRWIGGRAAQLGTT 184
+ GEA+VDD LFDGDV GV IEPT +PGLRA V G + +RWI GRAAQLGT+
Sbjct 111 GARTVRGEAIVDDERLFDGDVTGVRIEPTTAMPGLRATVLTGPMRPKRWISGRAAQLGTS 170
Query 185 GAAVLRDGVAAPRPVRRSTFYRNVEGWLLV 214
GA V+RDG A RPVRRSTFYR+ +GWL V
Sbjct 171 GAVVVRDGEPAKRPVRRSTFYRHTQGWLRV 200
>gi|145220834|ref|YP_001131512.1| hypothetical protein Mflv_0229 [Mycobacterium gilvum PYR-GCK]
gi|145213320|gb|ABP42724.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=203
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/210 (55%), Positives = 134/210 (64%), Gaps = 20/210 (9%)
Query 10 VAVLLSGDADVPGPLTGLP----THQDNLDTVIGRYSRLIVVGADADLGAVLTRLLRTDR 65
+AV+ G VP L LP T D D + G Y RL+VVG+D DL AVLT+LLR DR
Sbjct 6 IAVVRPGARRVPRSLRDLPVLTGTGSDLSDDITG-YRRLLVVGSDRDLSAVLTKLLRADR 64
Query 66 LDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQWLPAE 125
LD+EV ++ AAR AR A RVPLIRDETG+VI G A WLP +
Sbjct 65 LDIEVAHL--------------RRPWAARAARTAPAGRVPLIRDETGTVIAGAALWLPPD 110
Query 126 EQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAV-DGAGKWRRWIGGRAAQLGTT 184
+ GEA+VDD LFDGDV GV IEPT +PGLRA V G + +RWI GRAAQLGT+
Sbjct 111 GARTVRGEAIVDDERLFDGDVTGVRIEPTTAMPGLRATVLTGPMRPKRWISGRAAQLGTS 170
Query 185 GAAVLRDGVAAPRPVRRSTFYRNVEGWLLV 214
GA V+RDG A RPVRRSTFYR+ +GWL V
Sbjct 171 GAMVVRDGEPAKRPVRRSTFYRHTQGWLRV 200
>gi|118473507|ref|YP_885164.1| hypothetical protein MSMEG_0758 [Mycobacterium smegmatis str.
MC2 155]
gi|118174794|gb|ABK75690.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=179
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/197 (54%), Positives = 127/197 (65%), Gaps = 21/197 (10%)
Query 20 VPGPLTGLPT-HQDNLDTVIGRYSRLIVVGADADLGAVLTRLLRTDRLDVEVGYVPRRRS 78
+P PL GLPT D++D + R+IV G+ DL AVLTRLL+ DRLDVEV + S
Sbjct 1 MPRPLRGLPTVGIDDVDA----HHRVIVTGSAGDLAAVLTRLLKADRLDVEVAHARTSWS 56
Query 79 PATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDD 138
ARRA G ARRVPLIRDETG+V+V A+W +E A + GEA+VDD
Sbjct 57 --------------ARRALRGTARRVPLIRDETGTVLVSAAEW-HGKEAAPLEGEAIVDD 101
Query 139 TVLFDGDVAGVCIEPTLTLPGLRAAV-DGAGKWRRWIGGRAAQLGTTGAAVLRDGVAAPR 197
TVLFDG GV IEP +PGLRA+V G+ W+ GRAAQLGT GA V+RDG R
Sbjct 102 TVLFDGQAHGVRIEPLDAVPGLRASVLSRRGRPLGWVSGRAAQLGTPGAVVVRDGATMAR 161
Query 198 PVRRSTFYRNVEGWLLV 214
PVRRSTFYR+ +GWL V
Sbjct 162 PVRRSTFYRHTQGWLRV 178
>gi|306782985|ref|ZP_07421307.1| hypothetical protein TMCG_03042 [Mycobacterium tuberculosis SUMu003]
gi|308332203|gb|EFP21054.1| hypothetical protein TMCG_03042 [Mycobacterium tuberculosis SUMu003]
Length=84
Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/84 (100%), Positives = 84/84 (100%), Gaps = 0/84 (0%)
Query 1 MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADADLGAVLTRL 60
MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADADLGAVLTRL
Sbjct 1 MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADADLGAVLTRL 60
Query 61 LRTDRLDVEVGYVPRRRSPATRAY 84
LRTDRLDVEVGYVPRRRSPATRAY
Sbjct 61 LRTDRLDVEVGYVPRRRSPATRAY 84
>gi|325673879|ref|ZP_08153569.1| hypothetical protein HMPREF0724_11351 [Rhodococcus equi ATCC
33707]
gi|325555144|gb|EGD24816.1| hypothetical protein HMPREF0724_11351 [Rhodococcus equi ATCC
33707]
Length=224
Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/218 (49%), Positives = 126/218 (58%), Gaps = 16/218 (7%)
Query 12 VLLSGDADVPGPLTGLPT-------HQDNLDTVIGRYS-----RLIVVGADADLGAVLTR 59
VL G+A +P L L +D+ D + RLIVVG DA A LTR
Sbjct 5 VLKCGNAPLPLALRSLDVLSVPALPDKDDFDEAFAKIETSEKPRLIVVGDDAAFAAALTR 64
Query 60 LLRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRA 119
L+RTDRL VE+ YVP R+ AT AY L G +AA A GVAR PLIRD+ G +VG A
Sbjct 65 LMRTDRLHVELAYVPEERTDATHAYGLRTGSKAATIAVSGVARSTPLIRDDAGIALVGEA 124
Query 120 QWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAGKW---RRWIGG 176
+E + GEA VDD LF G V G+ I PT LPGLRA VD +W RW+ G
Sbjct 125 LVYGSEHAGELVGEAYVDDERLFSGTVPGMRIVPTPELPGLRATVDKR-RWFGGHRWLTG 183
Query 177 RAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLV 214
RA QLG+ A + RDGV PR V+RSTFYR+ + WLLV
Sbjct 184 RAVQLGSPAAVLTRDGVRTPRAVKRSTFYRHDQDWLLV 221
>gi|312141287|ref|YP_004008623.1| hypothetical protein REQ_39610 [Rhodococcus equi 103S]
gi|311890626|emb|CBH49944.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length=220
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/223 (49%), Positives = 128/223 (58%), Gaps = 15/223 (6%)
Query 1 MYTAENAPGVAVLLSGDA-DVPGPLTGLPTHQDNLDTVIGRYS-----RLIVVGADADLG 54
M NAP L S D VP LP +D+ D + RLIVVG DA
Sbjct 1 MLKCGNAPLPLALRSLDVLSVPA----LP-DKDDFDEAFAKIETSEKPRLIVVGDDAAFA 55
Query 55 AVLTRLLRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSV 114
A LTRL+RTDRL VE+ YVP R+ AT AY L G +AA A GVAR PLIRD+ G
Sbjct 56 AALTRLMRTDRLHVELAYVPEERTDATHAYGLRTGSKAATIAVSGVARSTPLIRDDAGIA 115
Query 115 IVGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAGKW---R 171
+VG A +E + GEA VDD LF G V G+ I PT LPGLRA VD +W
Sbjct 116 LVGEALVYGSEHAGELVGEAYVDDERLFSGTVPGMRIVPTPELPGLRATVDKR-RWFGGH 174
Query 172 RWIGGRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLV 214
RW+ GRA QLG+ A + RDGV PR V+RSTFYR+ + WLLV
Sbjct 175 RWLTGRAVQLGSPAAVLTRDGVRTPRAVKRSTFYRHDQDWLLV 217
>gi|226365029|ref|YP_002782812.1| hypothetical protein ROP_56200 [Rhodococcus opacus B4]
gi|226243519|dbj|BAH53867.1| hypothetical protein [Rhodococcus opacus B4]
Length=217
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/218 (50%), Positives = 134/218 (62%), Gaps = 15/218 (6%)
Query 12 VLLSGDADVPGPL-----TGLPT--HQDNLDTVIGRYS-----RLIVVGADADLGAVLTR 59
+L+ GDA +P PL + PT +D+ D V + RLIVVG+DA L A LTR
Sbjct 1 MLICGDAPLPLPLGSISASSAPTVPDKDDFDEVFSKLQVVADPRLIVVGSDAALAATLTR 60
Query 60 LLRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRA 119
L+RT+RL +E+ YV RS AT AY L AG R AR A G AR VPLIRD+ G +VG A
Sbjct 61 LMRTERLHIELAYVAEHRSEATEAYHLSAGARGARTALKGTARPVPLIRDDAGIALVGCA 120
Query 120 QWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVD--GAGKWRRWIGGR 177
+ L+ GEA VDDT LF G + + PT +PGLRA+V+ RRW+ GR
Sbjct 121 TVTGPDGGPLV-GEAYVDDTRLFSGTTTNMNVTPTPRMPGLRASVEPRRRWLPRRWVEGR 179
Query 178 AAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
A QLG+ AA+ RDGV PR V+RSTFYR+ + WLLVR
Sbjct 180 AVQLGSPAAALTRDGVPNPRDVKRSTFYRHDQEWLLVR 217
>gi|111022516|ref|YP_705488.1| hypothetical protein RHA1_ro05550 [Rhodococcus jostii RHA1]
gi|110822046|gb|ABG97330.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=221
Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 105/218 (49%), Positives = 131/218 (61%), Gaps = 15/218 (6%)
Query 12 VLLSGDADVPGPLTGLPTH-------QDNLDTVIGRYS-----RLIVVGADADLGAVLTR 59
VL+ GD +P PL + T +D+ D V + RLIVVG+DA A LTR
Sbjct 5 VLICGDVPLPLPLGSISTSSAPAVPDKDDFDEVFSKLQVVVDPRLIVVGSDAAFAATLTR 64
Query 60 LLRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRA 119
L+RTDRL +E+ YV RS AT AY L +G R AR A G AR VPLIRD+ G +VG A
Sbjct 65 LMRTDRLHIELAYVAEHRSEATDAYHLSSGARGARTALKGTARPVPLIRDDAGIALVGCA 124
Query 120 QWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVD--GAGKWRRWIGGR 177
+ L+ GEA VDDT LF G + + PT +PGLRA+V+ RRW+ GR
Sbjct 125 TVTGPDGGPLV-GEAYVDDTRLFSGTTPSMNVAPTPRMPGLRASVEPRRRWLPRRWVEGR 183
Query 178 AAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
A QLG+ AA+ RDGV PR V+RSTFYR+ + WLLVR
Sbjct 184 AVQLGSPAAALNRDGVPNPREVKRSTFYRHDQEWLLVR 221
>gi|226304916|ref|YP_002764874.1| hypothetical protein RER_14270 [Rhodococcus erythropolis PR4]
gi|226184031|dbj|BAH32135.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=224
Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/219 (48%), Positives = 131/219 (60%), Gaps = 16/219 (7%)
Query 12 VLLSGDADVPGPL--------TGLPTHQDNLDTVIGRYS-----RLIVVGADADLGAVLT 58
VL GD+ VP PL LP QD D + + RLIVVG D A LT
Sbjct 7 VLKCGDSPVPLPLGELTSFTVPELPEKQD-FDEALSQLQVVTEPRLIVVGNDGAFAAALT 65
Query 59 RLLRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGR 118
RL+R +RL+VE+ YV RS AT AY+L G RAAR A G VPLIRD+ G +VG
Sbjct 66 RLMRLERLNVELAYVTENRSDATDAYKLATGARAARTALKGTVHTVPLIRDDAGIALVGA 125
Query 119 AQWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAGKW--RRWIGG 176
A + A + GEA VDD LF G V G+ I P+ LPG++A+VD +W RRW+ G
Sbjct 126 ATVTGPADAAELIGEAYVDDNKLFSGTVPGIRIVPSPKLPGIKASVDRKSRWSGRRWLEG 185
Query 177 RAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
RA QLG+ A ++RDGVA PR ++RSTFYR+ + WLLVR
Sbjct 186 RAIQLGSPAARLVRDGVANPRDLKRSTFYRHDKTWLLVR 224
>gi|229493093|ref|ZP_04386888.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229320123|gb|EEN85949.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=219
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/220 (50%), Positives = 132/220 (60%), Gaps = 18/220 (8%)
Query 12 VLLSGDADVPGPL--------TGLPTHQDNLDTVIGRYS-----RLIVVGADADLGAVLT 58
VL GD+ VP PL LP QD D + + RLIVVG D A LT
Sbjct 2 VLKCGDSPVPLPLGELTSFTVPELPEKQD-FDEALSQLQVVTEPRLIVVGNDGAFAAALT 60
Query 59 RLLRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGR 118
RL+R +RL VE+ YV RS AT AY+L G RAAR A G VPLIRD+ G +VG
Sbjct 61 RLMRLERLHVELAYVTENRSDATDAYKLATGARAARTALKGTVHTVPLIRDDAGIALVGA 120
Query 119 AQWL-PAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAGKW--RRWIG 175
A PA+ LI GEA VDD LF G V G+ I P+ LPG++A+VD +W RRW+
Sbjct 121 ATVTGPADADELI-GEAYVDDNKLFSGTVPGIRIVPSPKLPGIKASVDRKSRWSGRRWLE 179
Query 176 GRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
GRA QLG+ A ++RDGVA PR ++RSTFYR+ + WLLVR
Sbjct 180 GRAIQLGSPAARLVRDGVANPRDLKRSTFYRHDKTWLLVR 219
>gi|306779198|ref|ZP_07417535.1| hypothetical protein TMBG_03588 [Mycobacterium tuberculosis SUMu002]
gi|308327849|gb|EFP16700.1| hypothetical protein TMBG_03588 [Mycobacterium tuberculosis SUMu002]
Length=80
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/80 (100%), Positives = 80/80 (100%), Gaps = 0/80 (0%)
Query 1 MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADADLGAVLTRL 60
MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADADLGAVLTRL
Sbjct 1 MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADADLGAVLTRL 60
Query 61 LRTDRLDVEVGYVPRRRSPA 80
LRTDRLDVEVGYVPRRRSPA
Sbjct 61 LRTDRLDVEVGYVPRRRSPA 80
>gi|333918182|ref|YP_004491763.1| hypothetical protein AS9A_0506 [Amycolicicoccus subflavus DQS3-9A1]
gi|333480403|gb|AEF38963.1| hypothetical protein AS9A_0506 [Amycolicicoccus subflavus DQS3-9A1]
Length=218
Score = 147 bits (372), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/214 (49%), Positives = 129/214 (61%), Gaps = 13/214 (6%)
Query 12 VLLSGDADVPGPLTGLPTH-------QDNLDTVIGRYSRLIVVGADADLGAVLTRLLRTD 64
VL G+ +P L+ L H + +LD +I R++VVG DA L AV+TRL+R +
Sbjct 5 VLACGETPIPRQLSALHVHALDTVPGRGDLDPLIATAERIVVVGEDAALAAVVTRLMRRE 64
Query 65 RLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQWL-- 122
RL+ EV YV +++ AT Y LP G RAAR A G A VPLIRD+TG +VGRA
Sbjct 65 RLEAEVAYVTPKKTAATAGYSLPTGDRAARLAVAGDATEVPLIRDDTGVAVVGRAVVAGP 124
Query 123 PAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAV-DGAGKWRRWIGGRAAQL 181
P E + GEA VDD LF G V G+ I PT+ LPGLRA+V G RRW+ GRA QL
Sbjct 125 PGGE---LFGEAYVDDERLFLGPVGGIEIRPTVELPGLRASVIRGRLVPRRWLSGRAIQL 181
Query 182 GTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
G G + RDG+ R V+RSTFYR+ E LVR
Sbjct 182 GAHGLTLTRDGIPHARTVKRSTFYRHTEPLRLVR 215
>gi|262203906|ref|YP_003275114.1| hypothetical protein Gbro_4055 [Gordonia bronchialis DSM 43247]
gi|262087253|gb|ACY23221.1| hypothetical protein Gbro_4055 [Gordonia bronchialis DSM 43247]
Length=218
Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/167 (50%), Positives = 102/167 (62%), Gaps = 1/167 (0%)
Query 49 ADADLGAVLTRLLRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIR 108
ADA VL L+ DRLDVEV + P + ATR Y LP G A A G A +PLIR
Sbjct 52 ADAFFAHVLAALMIADRLDVEVAFTPAEATTATRRYGLPHGPAARELAEHGTADTLPLIR 111
Query 109 DETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAG 168
D+ +V+VGRA+ L AE A +HGE VD+ LFDG+V V IEPT+ PG+RA V+
Sbjct 112 DDAATVVVGRARHLGAE-GAKLHGETYVDNERLFDGEVKSVLIEPTVDEPGVRAQVERLL 170
Query 169 KWRRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
RW+ GRAAQ G T V R+G+ PR V+RSTFYR+ LVR
Sbjct 171 LPGRWVHGRAAQTGGTNVIVEREGIVTPRVVKRSTFYRHHVDLRLVR 217
>gi|343928560|ref|ZP_08768007.1| hypothetical protein GOALK_118_00510 [Gordonia alkanivorans NBRC
16433]
gi|343761571|dbj|GAA14933.1| hypothetical protein GOALK_118_00510 [Gordonia alkanivorans NBRC
16433]
Length=218
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/179 (48%), Positives = 105/179 (59%), Gaps = 1/179 (0%)
Query 37 VIGRYSRLIVVGADADLGAVLTRLLRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRA 96
V R++ + AD L V+ L+ ++RLDVEV YV + ATR Y LP G A A
Sbjct 40 VAERFAPTLAEEADTFLDQVVAALMTSERLDVEVAYVSAEATAATRRYCLPHGPAARELA 99
Query 97 RCGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLT 156
G A VPLIRD+ +VI G A+ L A E A +HGE+ VD LFDG+V V IEPTL
Sbjct 100 ENGTASPVPLIRDDAATVIFGSARHLGA-EGAKLHGESYVDSERLFDGEVRSVLIEPTLD 158
Query 157 LPGLRAAVDGAGKWRRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
PGLRA V+ +W GRA Q G T V R+GV R ++RSTFYR+V LLVR
Sbjct 159 APGLRAQVERFLLPGKWFAGRAVQTGGTNIVVEREGVVNERVLKRSTFYRHVTDLLLVR 217
>gi|319949322|ref|ZP_08023397.1| hypothetical protein ES5_07846 [Dietzia cinnamea P4]
gi|319437014|gb|EFV92059.1| hypothetical protein ES5_07846 [Dietzia cinnamea P4]
Length=218
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/215 (42%), Positives = 122/215 (57%), Gaps = 13/215 (6%)
Query 12 VLLSGDADVPGPL--------TGLPTHQDNLDTV--IGRYSRLIVVGADADLGAVLTRLL 61
V+ G A VP L + +PT ++ + +G RL+V G DA L A+LTRL+
Sbjct 3 VIRCGSAPVPTVLGEHPRVEVSAVPTKEEVTRALSEVGTRRRLVVCGTDAGLAALLTRLM 62
Query 62 RTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQW 121
RT+ LDVE+ YV +PAT+AY LP G AA+ G AR VPL+RD+TG+ +VG A
Sbjct 63 RTENLDVEIAYVADEPTPATKAYGLPTGSEAAKLGVRGEAREVPLVRDDTGTALVGEATV 122
Query 122 LPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAA--VDGAGKWRRWIGGRAA 179
E L+ GEA DD +F G++ + + PT LPG+ A + R W+ RA
Sbjct 123 HGPEGGHLV-GEAYADDNRVFSGEIDALTVRPTPDLPGVVATAARPRWLRRRPWLAARAV 181
Query 180 QLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLV 214
QLGT + RDGV R ++R+TFYR+ E W LV
Sbjct 182 QLGTEAGLLTRDGVTGRRAIKRTTFYRHTEPWRLV 216
>gi|306796092|ref|ZP_07434394.1| hypothetical protein TMFG_01648 [Mycobacterium tuberculosis SUMu006]
gi|306806163|ref|ZP_07442831.1| hypothetical protein TMGG_03364 [Mycobacterium tuberculosis SUMu007]
gi|308343469|gb|EFP32320.1| hypothetical protein TMFG_01648 [Mycobacterium tuberculosis SUMu006]
gi|308347360|gb|EFP36211.1| hypothetical protein TMGG_03364 [Mycobacterium tuberculosis SUMu007]
Length=68
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/68 (100%), Positives = 68/68 (100%), Gaps = 0/68 (0%)
Query 1 MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADADLGAVLTRL 60
MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADADLGAVLTRL
Sbjct 1 MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADADLGAVLTRL 60
Query 61 LRTDRLDV 68
LRTDRLDV
Sbjct 61 LRTDRLDV 68
>gi|296138253|ref|YP_003645496.1| hypothetical protein Tpau_0516 [Tsukamurella paurometabola DSM
20162]
gi|296026387|gb|ADG77157.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length=211
Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/210 (41%), Positives = 110/210 (53%), Gaps = 16/210 (7%)
Query 12 VLLSGDADVPGPLTGLPTHQDNLDTVIGRYSR-------LIVVGADADLGAVLTRLLRTD 64
VL + D +P L L T +LD+V R LIV G D L AV+ RLL +
Sbjct 10 VLRAPDVRIPAGLRDLETVTVDLDSVKAELKRKMPYPRRLIVAGPDELLAAVIARLLAAE 69
Query 65 RLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRDETGSVIVGRAQWLPA 124
RLDVEV + P S A+ Y P G GV R VPLIRD+ G V+VG+A+ +
Sbjct 70 RLDVEVAFAPTENSRASAIY--PPGD-----PLTGVPRSVPLIRDDRGFVLVGQAR-ITG 121
Query 125 EEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAGKWRRWIGGRAAQLGTT 184
+ + GE VD LF G + +EPT + G+RA + G R+W+ GRAAQ G
Sbjct 122 PDGGPLTGETFVDSEKLFTGQAKAIIVEPTGSGAGVRARL-AKGMRRKWLSGRAAQTGGL 180
Query 185 GAAVLRDGVAAPRPVRRSTFYRNVEGWLLV 214
V RDG P V RSTFYR+ + WLL+
Sbjct 181 ELVVTRDGRTDPSVVTRSTFYRHTDDWLLI 210
>gi|326384110|ref|ZP_08205793.1| hypothetical protein SCNU_14304 [Gordonia neofelifaecis NRRL
B-59395]
gi|326197270|gb|EGD54461.1| hypothetical protein SCNU_14304 [Gordonia neofelifaecis NRRL
B-59395]
Length=212
Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/171 (44%), Positives = 95/171 (56%), Gaps = 12/171 (7%)
Query 50 DADLGAVLTRLLRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAARRARCGVARRVPLIRD 109
DA V+ L++ +RLDVEV YV + ATR Y LP G A R A G A+++PLIRD
Sbjct 48 DAFFARVVAALMKLERLDVEVAYVAPHATAATRNYGLPHGDAAMRLATDGAAQQLPLIRD 107
Query 110 ETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAVDGAGK 169
+ +V+VGRA+ L + + L HGE + D +FDG V IEP PG+R G+
Sbjct 108 DAATVLVGRARHLGSGGEKL-HGECIADSDTIFDGTARAVEIEPLTVEPGVR------GR 160
Query 170 WRR-----WIGGRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLVR 215
R W GRA Q G T V R+G R V+RSTFYR+ W LVR
Sbjct 161 LARRLPGGWKTGRAVQTGGTNVVVEREGELTDRVVKRSTFYRHHVDWKLVR 211
>gi|289744054|ref|ZP_06503432.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289684582|gb|EFD52070.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=57
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/55 (95%), Positives = 52/55 (95%), Gaps = 0/55 (0%)
Query 1 MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADADLGA 55
MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADA G
Sbjct 1 MYTAENAPGVAVLLSGDADVPGPLTGLPTHQDNLDTVIGRYSRLIVVGADAGPGG 55
>gi|296394027|ref|YP_003658911.1| hypothetical protein Srot_1619 [Segniliparus rotundus DSM 44985]
gi|296181174|gb|ADG98080.1| hypothetical protein Srot_1619 [Segniliparus rotundus DSM 44985]
Length=224
Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/174 (42%), Positives = 95/174 (55%), Gaps = 14/174 (8%)
Query 48 GADADLGAVLTRLLRTDRLDVEVGYVPRRRSPATRAYRL---PAGRRAARRARCGVARRV 104
AD DL AVLTRL+R ++L V + Y+P R+ +AY L PA RA AR
Sbjct 57 AADGDLAAVLTRLMRREQLRVPIAYLPLARTACAKAYSLSLDPA------RALAEAARPR 110
Query 105 PLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFDGDVAGVCIEPTLTLPGLRAAV 164
PL+RD+ G +VG A + L+ GE++VDDT L G +A V + T PG+ A
Sbjct 111 PLVRDDDGVALVGEAVITGPDGGPLV-GESIVDDTRLRLGAIASVVVRATAREPGVAACA 169
Query 165 DGAGKW----RRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRSTFYRNVEGWLLV 214
AG W+ GRAAQ G V+RDGV APR R TF+R+ E WLL+
Sbjct 170 RRAGLAGLFPPAWVAGRAAQTGAEALRVVRDGVPAPRVRTRITFFRHTEDWLLI 223
>gi|324997903|ref|ZP_08119015.1| hypothetical protein PseP1_04019 [Pseudonocardia sp. P1]
Length=191
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/189 (41%), Positives = 102/189 (54%), Gaps = 23/189 (12%)
Query 31 QDNLDTVIGRY--SRLIVVGADADLGAVLTRLLRTDRLDVEVGYVP-RRRSPATRAYRLP 87
+D +D ++ + +RLIV G DADL AV+ RLLR L EV Y+P RRS A + +P
Sbjct 12 KDVVDPLLAEHPGARLIVHGDDADLAAVVLRLLRRSALGTEVAYLPVDRRSAAAANWGVP 71
Query 88 AGRRAARR-ARCGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLFDGDV 146
AA R AR G AR PL+RD+ G V+VGR E ++GEA D T +F G V
Sbjct 72 VSPAAAARLARTGAARPEPLVRDDNGGVLVGRG------EIPDLYGEAYCDATRVFRGRV 125
Query 147 AGVCIEPTLTLPGLRAAVDG----AGKWRRWIGGRAAQLGTTGAAVLRDGVAAPRPVRRS 202
+ ++ A DG G+ GRA Q+GTTGA +RDG PR +RR
Sbjct 126 PRLVVD---------AGPDGVRIRGGRGVTAAQGRAIQIGTTGATPVRDGEPHPREIRRW 176
Query 203 TFYRNVEGW 211
+YR+ E W
Sbjct 177 AWYRHTEPW 185
>gi|296119021|ref|ZP_06837594.1| conserved hypothetical protein [Corynebacterium ammoniagenes
DSM 20306]
gi|295968119|gb|EFG81371.1| conserved hypothetical protein [Corynebacterium ammoniagenes
DSM 20306]
Length=282
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/206 (37%), Positives = 103/206 (50%), Gaps = 29/206 (14%)
Query 38 IGRYSRLIVVGADADLGAVLTRLLRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAA-RRA 96
I + R++VVG DA L AVLTR++R D + EV YVP S A + + +P AA A
Sbjct 75 IDKPLRIVVVGDDAALSAVLTRMMRADYMWAEVAYVPSSASTAAQNWNIPTDSDAAWALA 134
Query 97 RCGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDTVL-FDGDVAGVCIEPTL 155
G R VPLIR +TG + G A + L+ GE +VDDT L G+ G + P +
Sbjct 135 LEGEVRPVPLIRTDTGLAVAGSATVSSWDHGPLV-GEIIVDDTTLVHSGERFGARLVPMV 193
Query 156 TLPGLRAAV--------DGAGKWRRW---------IG---------GRAAQLGTTGAAVL 189
PGL AA + A +W+R+ +G GRA Q G V
Sbjct 194 DAPGLLAAAAVTPFAYPEAASRWQRFRQKLAGTAALGQLDAASARTGRAMQAGGPELRVS 253
Query 190 RDGVAAPRPVRRSTFYRNVEGWLLVR 215
DG + RPV+RSTFYR++ +VR
Sbjct 254 VDGASGKRPVKRSTFYRHLRDLQVVR 279
>gi|25029154|ref|NP_739208.1| hypothetical protein CE2598 [Corynebacterium efficiens YS-314]
gi|23494442|dbj|BAC19408.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length=308
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/204 (38%), Positives = 100/204 (50%), Gaps = 35/204 (17%)
Query 43 RLIVVGADADLGAVLTRLLRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAA-RRARCGVA 101
R++V+G+DA L AV+TRL+R D + EV YVP S A + + LPA AA R A GVA
Sbjct 108 RIVVIGSDASLSAVITRLMRADNMWAEVAYVPTGESVAAKNWGLPADPGAALRLALTGVA 167
Query 102 RRVPLIRDETGSVIVGRA---QWLPAEEQALIHGEAVVDDTVLFDGD---------VAGV 149
+ VP IRD+ + G A W P E I GE +VDD VL + + G
Sbjct 168 KPVPTIRDDAAVAVAGSATITDWEPGE----ITGEIIVDDHVLVRHEASPKTPRRGIFGA 223
Query 150 CIEPTLTLPGLRAAVDGA---------GKWRRWIG---------GRAAQLGTTGAAVLRD 191
+ P + PG+ AAV G +RR G GRA Q G V D
Sbjct 224 RLVPMMVAPGIAAAVMDTPAPGTEIKKGLFRRPTGTLIPESLSTGRATQAGGPSLRVTVD 283
Query 192 GVAAPRPVRRSTFYRNVEGWLLVR 215
GV+ R V R TFYR++ +VR
Sbjct 284 GVSRKRAVERVTFYRHLRDLQVVR 307
>gi|259505851|ref|ZP_05748753.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259166525|gb|EEW51079.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length=283
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/204 (38%), Positives = 100/204 (50%), Gaps = 35/204 (17%)
Query 43 RLIVVGADADLGAVLTRLLRTDRLDVEVGYVPRRRSPATRAYRLPAGRRAA-RRARCGVA 101
R++V+G+DA L AV+TRL+R D + EV YVP S A + + LPA AA R A GVA
Sbjct 83 RIVVIGSDASLSAVITRLMRADNMWAEVAYVPTGESVAAKNWGLPADPGAALRLALTGVA 142
Query 102 RRVPLIRDETGSVIVGRA---QWLPAEEQALIHGEAVVDDTVLFDGD---------VAGV 149
+ VP IRD+ + G A W P E I GE +VDD VL + + G
Sbjct 143 KPVPTIRDDAAVAVAGSATITDWEPGE----ITGEIIVDDHVLVRHEASPKTPRRGIFGA 198
Query 150 CIEPTLTLPGLRAAVDGA---------GKWRRWIG---------GRAAQLGTTGAAVLRD 191
+ P + PG+ AAV G +RR G GRA Q G V D
Sbjct 199 RLVPMMVAPGIAAAVMDTPAPGTEIKKGLFRRPTGTLIPESLSTGRATQAGGPSLRVTVD 258
Query 192 GVAAPRPVRRSTFYRNVEGWLLVR 215
GV+ R V R TFYR++ +VR
Sbjct 259 GVSRKRAVERVTFYRHLRDLQVVR 282
>gi|254777217|ref|ZP_05218733.1| hypothetical protein MaviaA2_21459 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=99
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 63/90 (70%), Gaps = 4/90 (4%)
Query 11 AVLLSGDADVPGPLTGLPTHQ----DNLDTVIGRYSRLIVVGADADLGAVLTRLLRTDRL 66
AVL G PL G+PTH+ ++D IG Y RLIV+G DA+L VLTRLLR +RL
Sbjct 9 AVLQFGRRRGYRPLRGMPTHRVAGDTDVDAAIGPYRRLIVLGGDAELALVLTRLLRAERL 68
Query 67 DVEVGYVPRRRSPATRAYRLPAGRRAARRA 96
DVE+ YVPRRR+ ATR YRLP G RAARRA
Sbjct 69 DVEMAYVPRRRTRATRNYRLPTGFRAARRA 98
>gi|134103596|ref|YP_001109257.1| hypothetical protein SACE_7174 [Saccharopolyspora erythraea NRRL
2338]
gi|291008041|ref|ZP_06566014.1| hypothetical protein SeryN2_26261 [Saccharopolyspora erythraea
NRRL 2338]
gi|133916219|emb|CAM06332.1| hypothetical protein SACE_7174 [Saccharopolyspora erythraea NRRL
2338]
Length=215
Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/198 (38%), Positives = 97/198 (49%), Gaps = 24/198 (12%)
Query 33 NLDTVI-GRYSRLIVVGADADLGAVLTRLLRTDRL-DVEVGYVPRRRSPATRAYRLPAGR 90
++D+++ G RL+V G DADL AV+ RLLR DR+ VEVGYVP SPATR Y L G
Sbjct 14 DVDSLLAGLEGRLLVHGTDADLAAVVLRLLRKDRIAHVEVGYVPVAESPATRLYGLATGD 73
Query 91 RAARRARCGVARRVPLIRDETGSVIVGRAQWLPAEEQALIHGEAVVDDTVLF-----DGD 145
+A G R VPLIRD++G V+V P Q + V++ + L D D
Sbjct 74 AGFEQALHGAVRPVPLIRDDSGGVLVASGVVEPITGQVYCDDQQVLNGSALRMEVAPDPD 133
Query 146 VAGVCIEPTLTLPGLRAAVDGAGKWRRWIGGR--------------AAQLGTTGAAVLRD 191
A + P T L A ++ A R R A Q A V+RD
Sbjct 134 AAPL---PEPTSDPLSAMLEPASDGIRVTTTRRAFLRRREEVVRGRALQASFRSATVVRD 190
Query 192 GVAAPRPVRRSTFYRNVE 209
GVA PRP + +YR+ E
Sbjct 191 GVAHPRPAEKWGWYRHTE 208
Lambda K H
0.322 0.140 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 257507162856
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40