BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0370c Length=298 Score E Sequences producing significant alignments: (Bits) Value gi|15607511|ref|NP_214884.1| oxidoreductase [Mycobacterium tuber... 594 4e-168 gi|31791547|ref|NP_854040.1| oxidoreductase [Mycobacterium bovis... 591 4e-167 gi|289568282|ref|ZP_06448509.1| oxidoreductase [Mycobacterium tu... 591 5e-167 gi|340625400|ref|YP_004743852.1| putative oxidoreductase [Mycoba... 590 1e-166 gi|289441749|ref|ZP_06431493.1| LOW QUALITY PROTEIN: oxidoreduct... 574 6e-162 gi|240172160|ref|ZP_04750819.1| putative oxidoreductase [Mycobac... 507 9e-142 gi|296167828|ref|ZP_06850013.1| carbon monoxide dehydrogenase D ... 483 2e-134 gi|183980685|ref|YP_001848976.1| membrane oxidoreductase [Mycoba... 473 1e-131 gi|118616012|ref|YP_904344.1| membrane oxidoreductase [Mycobacte... 466 3e-129 gi|118468110|ref|YP_885154.1| ATPase [Mycobacterium smegmatis st... 439 2e-121 gi|226364691|ref|YP_002782473.1| hypothetical protein ROP_52810 ... 428 6e-118 gi|111022201|ref|YP_705173.1| oxidoreductase [Rhodococcus jostii... 416 2e-114 gi|281191488|gb|ADA57157.1| unknown [Mycobacterium sp. DSM 3803] 402 3e-110 gi|312140396|ref|YP_004007732.1| carbon monoxide dehydrogenase a... 382 5e-104 gi|315502810|ref|YP_004081697.1| ATPase [Micromonospora sp. L5] ... 363 1e-98 gi|302866399|ref|YP_003835036.1| ATPase [Micromonospora aurantia... 361 1e-97 gi|108797473|ref|YP_637670.1| putative oxidoreductase [Mycobacte... 357 1e-96 gi|116670583|ref|YP_831516.1| ATPase [Arthrobacter sp. FB24] >gi... 309 3e-82 gi|108802968|ref|YP_642905.1| ATPase [Rubrobacter xylanophilus D... 298 5e-79 gi|284044484|ref|YP_003394824.1| ATPase associated with various ... 287 1e-75 gi|291295908|ref|YP_003507306.1| ATPase associated with various ... 281 7e-74 gi|297567082|ref|YP_003686054.1| ATPase [Meiothermus silvanus DS... 281 8e-74 gi|219849328|ref|YP_002463761.1| ATPase [Chloroflexus aggregans ... 281 1e-73 gi|148656291|ref|YP_001276496.1| ATPase [Roseiflexus sp. RS-1] >... 281 1e-73 gi|345304204|ref|YP_004826106.1| ATPase [Rhodothermus marinus SG... 279 4e-73 gi|90419154|ref|ZP_01227064.1| moxR-like ATPase [Aurantimonas ma... 278 6e-73 gi|268317924|ref|YP_003291643.1| ATPase [Rhodothermus marinus DS... 278 6e-73 gi|163846561|ref|YP_001634605.1| ATPase [Chloroflexus aurantiacu... 276 2e-72 gi|269837430|ref|YP_003319658.1| ATPase associated with various ... 276 3e-72 gi|296269362|ref|YP_003651994.1| ATPase [Thermobispora bispora D... 276 4e-72 gi|298242136|ref|ZP_06965943.1| ATPase associated with various c... 272 4e-71 gi|156741436|ref|YP_001431565.1| ATPase [Roseiflexus castenholzi... 271 1e-70 gi|227822074|ref|YP_002826045.1| putative ATPase, AAA family [Si... 270 2e-70 gi|110633643|ref|YP_673851.1| ATPase [Mesorhizobium sp. BNC1] >g... 270 2e-70 gi|134097144|ref|YP_001102805.1| ATPase [Saccharopolyspora eryth... 270 2e-70 gi|119718194|ref|YP_925159.1| ATPase [Nocardioides sp. JS614] >g... 270 3e-70 gi|118431784|ref|NP_148466.2| CoxD-like protein [Aeropyrum perni... 270 3e-70 gi|315427130|dbj|BAJ48745.1| ATPase [Candidatus Caldiarchaeum su... 269 3e-70 gi|86137531|ref|ZP_01056108.1| hypothetical protein MED193_06714... 269 4e-70 gi|315427099|dbj|BAJ48715.1| ATPase [Candidatus Caldiarchaeum su... 269 4e-70 gi|258655388|ref|YP_003204544.1| ATPase [Nakamurella multipartit... 269 4e-70 gi|328544630|ref|YP_004304739.1| ATPase, AAA family [Polymorphum... 269 4e-70 gi|288961755|ref|YP_003452065.1| ATPase associated with various ... 269 5e-70 gi|84515515|ref|ZP_01002877.1| hypothetical protein SKA53_02616 ... 267 1e-69 gi|159044899|ref|YP_001533693.1| hypothetical protein Dshi_2356 ... 267 1e-69 gi|27380774|ref|NP_772303.1| hypothetical protein bll5663 [Brady... 267 1e-69 gi|92118118|ref|YP_577847.1| ATPase [Nitrobacter hamburgensis X1... 267 1e-69 gi|163759558|ref|ZP_02166643.1| hypothetical protein HPDFL43_094... 267 1e-69 gi|154253399|ref|YP_001414223.1| ATPase [Parvibaculum lavamentiv... 267 2e-69 gi|15965505|ref|NP_385858.1| hypothetical protein SMc00515 [Sino... 267 2e-69 >gi|15607511|ref|NP_214884.1| oxidoreductase [Mycobacterium tuberculosis H37Rv] gi|15839756|ref|NP_334793.1| hypothetical protein MT0385 [Mycobacterium tuberculosis CDC1551] gi|148660136|ref|YP_001281659.1| putative oxidoreductase [Mycobacterium tuberculosis H37Ra] 55 more sequence titles Length=298 Score = 594 bits (1532), Expect = 4e-168, Method: Compositional matrix adjust. Identities = 297/298 (99%), Positives = 298/298 (100%), Gaps = 0/298 (0%) Query 1 VTFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLD 60 +TFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLD Sbjct 1 MTFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLD 60 Query 61 TTLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPIL 120 TTLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPIL Sbjct 61 TTLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPIL 120 Query 121 RCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNR 180 RCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNR Sbjct 121 RCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNR 180 Query 181 SRDLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPP 240 SRDLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPP Sbjct 181 SRDLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPP 240 Query 241 GVAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQAFTECSHA 298 GVAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQAFTECSHA Sbjct 241 GVAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQAFTECSHA 298 >gi|31791547|ref|NP_854040.1| oxidoreductase [Mycobacterium bovis AF2122/97] gi|121636283|ref|YP_976506.1| putative oxidoreductase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988755|ref|YP_002643442.1| putative oxidoreductase [Mycobacterium bovis BCG str. Tokyo 172] 10 more sequence titles Length=298 Score = 591 bits (1524), Expect = 4e-167, Method: Compositional matrix adjust. Identities = 296/298 (99%), Positives = 297/298 (99%), Gaps = 0/298 (0%) Query 1 VTFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLD 60 +TFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLD Sbjct 1 MTFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLD 60 Query 61 TTLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPIL 120 TTLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPIL Sbjct 61 TTLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPIL 120 Query 121 RCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNR 180 RCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNR Sbjct 121 RCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNR 180 Query 181 SRDLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPP 240 SRDLHDALRRRCLYHWIDYP PDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPP Sbjct 181 SRDLHDALRRRCLYHWIDYPEPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPP 240 Query 241 GVAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQAFTECSHA 298 GVAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQAFTECSHA Sbjct 241 GVAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQAFTECSHA 298 >gi|289568282|ref|ZP_06448509.1| oxidoreductase [Mycobacterium tuberculosis T17] gi|289748853|ref|ZP_06508231.1| oxidoreductase [Mycobacterium tuberculosis T92] gi|289752399|ref|ZP_06511777.1| oxidoreductase [Mycobacterium tuberculosis EAS054] gi|289542035|gb|EFD45684.1| oxidoreductase [Mycobacterium tuberculosis T17] gi|289689440|gb|EFD56869.1| oxidoreductase [Mycobacterium tuberculosis T92] gi|289692986|gb|EFD60415.1| oxidoreductase [Mycobacterium tuberculosis EAS054] Length=298 Score = 591 bits (1523), Expect = 5e-167, Method: Compositional matrix adjust. Identities = 295/298 (99%), Positives = 297/298 (99%), Gaps = 0/298 (0%) Query 1 VTFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLD 60 +TFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLD Sbjct 1 MTFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLD 60 Query 61 TTLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPIL 120 TTLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPIL Sbjct 61 TTLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPIL 120 Query 121 RCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNR 180 RCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPP+AVLTSNR Sbjct 121 RCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPMAVLTSNR 180 Query 181 SRDLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPP 240 SRDLHDALRRRCLYHWIDYP PDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPP Sbjct 181 SRDLHDALRRRCLYHWIDYPEPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPP 240 Query 241 GVAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQAFTECSHA 298 GVAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQAFTECSHA Sbjct 241 GVAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQAFTECSHA 298 >gi|340625400|ref|YP_004743852.1| putative oxidoreductase [Mycobacterium canettii CIPT 140010059] gi|340003590|emb|CCC42711.1| putative oxidoreductase [Mycobacterium canettii CIPT 140010059] Length=298 Score = 590 bits (1520), Expect = 1e-166, Method: Compositional matrix adjust. Identities = 295/298 (99%), Positives = 296/298 (99%), Gaps = 0/298 (0%) Query 1 VTFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLD 60 +TFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLA VLD Sbjct 1 MTFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAAVLD 60 Query 61 TTLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPIL 120 TTLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPIL Sbjct 61 TTLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPIL 120 Query 121 RCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNR 180 RCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNR Sbjct 121 RCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNR 180 Query 181 SRDLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPP 240 SRDLHDALRRRCLYHWIDYP PDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPP Sbjct 181 SRDLHDALRRRCLYHWIDYPEPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPP 240 Query 241 GVAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQAFTECSHA 298 GVAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQAFTECSHA Sbjct 241 GVAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQAFTECSHA 298 >gi|289441749|ref|ZP_06431493.1| LOW QUALITY PROTEIN: oxidoreductase [Mycobacterium tuberculosis T46] gi|289414668|gb|EFD11908.1| LOW QUALITY PROTEIN: oxidoreductase [Mycobacterium tuberculosis T46] Length=298 Score = 574 bits (1479), Expect = 6e-162, Method: Compositional matrix adjust. Identities = 287/290 (99%), Positives = 289/290 (99%), Gaps = 0/290 (0%) Query 1 VTFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLD 60 +TFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLD Sbjct 1 MTFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLD 60 Query 61 TTLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPIL 120 TTLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPIL Sbjct 61 TTLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPIL 120 Query 121 RCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNR 180 RCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPP+AVLTSNR Sbjct 121 RCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPMAVLTSNR 180 Query 181 SRDLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPP 240 SRDLHDALRRRCLYHWIDYP PDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPP Sbjct 181 SRDLHDALRRRCLYHWIDYPEPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPP 240 Query 241 GVAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQ 290 GVAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQ Sbjct 241 GVAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQ 290 >gi|240172160|ref|ZP_04750819.1| putative oxidoreductase [Mycobacterium kansasii ATCC 12478] Length=295 Score = 507 bits (1305), Expect = 9e-142, Method: Compositional matrix adjust. Identities = 257/297 (87%), Positives = 269/297 (91%), Gaps = 3/297 (1%) Query 1 VTFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLD 60 + F PDDV+RRFD +YLLD GTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLA VLD Sbjct 1 MMFTDPDDVVRRFDAHDYLLDLGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAAVLD 60 Query 61 TTLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPIL 120 TTL+RLQCYEGLTA+EALYDWNYQRQLL+IRLAEA+G GI EADLYTEAYLVDRPIL Sbjct 61 TTLVRLQCYEGLTASEALYDWNYQRQLLAIRLAEAQGTGIQ---EADLYTEAYLVDRPIL 117 Query 121 RCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNR 180 RCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTF+AE PP+AVLTSNR Sbjct 118 RCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFVAERPPVAVLTSNR 177 Query 181 SRDLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPP 240 SRDLHDALRRRCLYHWIDYP P RAAAIVRRTVPGATAPLI++ATQFV RDLDLDKPP Sbjct 178 SRDLHDALRRRCLYHWIDYPEPARAAAIVRRTVPGATAPLIQHATQFVGRTRDLDLDKPP 237 Query 241 GVAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQAFTECSH 297 GVAETIDWVAALV+LGVADL ALASLGALAKTPDDRT IRDAY AFTECS Sbjct 238 GVAETIDWVAALVSLGVADLQDESVPMALASLGALAKTPDDRTLIRDAYTAFTECSR 294 >gi|296167828|ref|ZP_06850013.1| carbon monoxide dehydrogenase D protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897026|gb|EFG76647.1| carbon monoxide dehydrogenase D protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=295 Score = 483 bits (1242), Expect = 2e-134, Method: Compositional matrix adjust. Identities = 250/295 (85%), Positives = 259/295 (88%), Gaps = 6/295 (2%) Query 2 TFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDT 61 F DDVI RFD ++YLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLA VLDT Sbjct 5 VFGDVDDVIARFDARDYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAAVLDT 64 Query 62 TLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILR 121 L+RLQCYEGLTA+EALYDWNYQRQLLSIRLAEA G+ I EADLYTEAYLVDRPILR Sbjct 65 PLVRLQCYEGLTASEALYDWNYQRQLLSIRLAEAGGRSIG---EADLYTEAYLVDRPILR 121 Query 122 CVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRS 181 CVRHRGPT PVLLIDEIDRADDEFEALLLEFLGE+AVTVPELGTF+AE PPIAVLTSNRS Sbjct 122 CVRHRGPTSPVLLIDEIDRADDEFEALLLEFLGEAAVTVPELGTFVAERPPIAVLTSNRS 181 Query 182 RDLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPG 241 RDLHDALRRRCLYHWIDYP RAAAIVRRTVPGA APLIE+ TQFV ARDLDLDKPPG Sbjct 182 RDLHDALRRRCLYHWIDYPEASRAAAIVRRTVPGAAAPLIEHVTQFVGRARDLDLDKPPG 241 Query 242 VAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQAFTECS 296 VAETIDWVAALV+LGVADL AL SLGALAKTPDDRT IRDAY F E S Sbjct 242 VAETIDWVAALVSLGVADLV---DPAALVSLGALAKTPDDRTLIRDAYHEFVEHS 293 >gi|183980685|ref|YP_001848976.1| membrane oxidoreductase [Mycobacterium marinum M] gi|183174011|gb|ACC39121.1| membrane oxidoreductase [Mycobacterium marinum M] Length=292 Score = 473 bits (1218), Expect = 1e-131, Method: Compositional matrix adjust. Identities = 253/292 (87%), Positives = 266/292 (92%), Gaps = 6/292 (2%) Query 2 TFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDT 61 TFA P DV+RRFD QNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAK LA VLDT Sbjct 5 TFADPQDVVRRFDAQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKALAAVLDT 64 Query 62 TLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILR 121 +LIRLQCYEGLTANEALYDWNYQ QLLSIRLAEARG +DISEADLY+EAYLVDRPIL+ Sbjct 65 SLIRLQCYEGLTANEALYDWNYQHQLLSIRLAEARG---ADISEADLYSEAYLVDRPILQ 121 Query 122 CVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRS 181 CVRHRG TPPVLLIDEIDRADDEFEALLLEFLGE+AVTVPELGTF+A PPIAVLTSNRS Sbjct 122 CVRHRGSTPPVLLIDEIDRADDEFEALLLEFLGEAAVTVPELGTFVAPLPPIAVLTSNRS 181 Query 182 RDLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPG 241 RDLHDALRRRCLYHWIDYP P RAAAIVRRTVPGA+A LIE+ATQFV +ARDLDLDKPPG Sbjct 182 RDLHDALRRRCLYHWIDYPEPARAAAIVRRTVPGASAALIEHATQFVGSARDLDLDKPPG 241 Query 242 VAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQAFT 293 VAETIDWVAALV+LGVADL A ALASLGALAKTPDDRT IRDA ++ Sbjct 242 VAETIDWVAALVSLGVADLVDAS---ALASLGALAKTPDDRTLIRDALTEYS 290 >gi|118616012|ref|YP_904344.1| membrane oxidoreductase [Mycobacterium ulcerans Agy99] gi|118568122|gb|ABL02873.1| membrane oxidoreductase [Mycobacterium ulcerans Agy99] Length=292 Score = 466 bits (1198), Expect = 3e-129, Method: Compositional matrix adjust. Identities = 250/292 (86%), Positives = 264/292 (91%), Gaps = 6/292 (2%) Query 2 TFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDT 61 TFA P DV+RRFD QNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAK LA VLDT Sbjct 5 TFADPQDVVRRFDAQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKALAAVLDT 64 Query 62 TLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILR 121 +LIRLQCYEGLTANEALYDWNYQ QLLSIRLAEARG +DISEADLY+EAYLVDRPIL+ Sbjct 65 SLIRLQCYEGLTANEALYDWNYQHQLLSIRLAEARG---ADISEADLYSEAYLVDRPILQ 121 Query 122 CVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRS 181 CVRHRG TPPVLLIDEIDRADDEFEALLLEFLGE+AVTVPELGTF+A PPIAVLTSNRS Sbjct 122 CVRHRGSTPPVLLIDEIDRADDEFEALLLEFLGEAAVTVPELGTFVAPLPPIAVLTSNRS 181 Query 182 RDLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPG 241 RDL+DALRRRCLYHWIDYP P RAAAIVRRTVPGA+A LIE+ATQFV +ARDLDLDKPPG Sbjct 182 RDLYDALRRRCLYHWIDYPEPARAAAIVRRTVPGASAALIEHATQFVGSARDLDLDKPPG 241 Query 242 VAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQAFT 293 VAETI WVAALV+LGVADL A ALASLGALAKTPD RT IRDA ++ Sbjct 242 VAETIGWVAALVSLGVADLVDAS---ALASLGALAKTPDARTLIRDALTEYS 290 >gi|118468110|ref|YP_885154.1| ATPase [Mycobacterium smegmatis str. MC2 155] gi|118169397|gb|ABK70293.1| ATPase associated with various cellular activities, AAA_5 [Mycobacterium smegmatis str. MC2 155] Length=300 Score = 439 bits (1130), Expect = 2e-121, Method: Compositional matrix adjust. Identities = 226/292 (78%), Positives = 246/292 (85%), Gaps = 5/292 (1%) Query 3 FASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTT 62 F DDV+RRFD +YLLD GTA+AIYLAV+LGRPLLLEGEPGVGKTTAAKTLA VL T Sbjct 14 FGGVDDVVRRFDAHDYLLDEGTATAIYLAVSLGRPLLLEGEPGVGKTTAAKTLAAVLGTP 73 Query 63 LIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRC 122 LIRLQCYEGLTA+EALYDWNYQRQLLSIRLAEARG + EA LYTE+YLVDRPIL+C Sbjct 74 LIRLQCYEGLTASEALYDWNYQRQLLSIRLAEARGG--EHLDEAALYTESYLVDRPILQC 131 Query 123 VRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSR 182 VRHRGP+ PVLL+DEIDRADDEFEALLLEFLGE+AVTVPELGTF+AE PP+ VLTSNRSR Sbjct 132 VRHRGPSSPVLLVDEIDRADDEFEALLLEFLGEAAVTVPELGTFVAERPPVVVLTSNRSR 191 Query 183 DLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGV 242 DLHDALRRRCLYHWI+YP +A AIVRRTVPGAT LI++A QFV AR+LDLDKPPGV Sbjct 192 DLHDALRRRCLYHWIEYPQRAQAVAIVRRTVPGATDALIDSAVQFVSAARELDLDKPPGV 251 Query 243 AETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQAFTE 294 AETIDWVAALVAL V DL AL +LGALAKTPDD +RDA T Sbjct 252 AETIDWVAALVALRVGDLV---DPAALGTLGALAKTPDDSGLMRDALLDLTN 300 >gi|226364691|ref|YP_002782473.1| hypothetical protein ROP_52810 [Rhodococcus opacus B4] gi|226243180|dbj|BAH53528.1| hypothetical protein [Rhodococcus opacus B4] Length=295 Score = 428 bits (1100), Expect = 6e-118, Method: Compositional matrix adjust. Identities = 219/296 (74%), Positives = 246/296 (84%), Gaps = 9/296 (3%) Query 3 FASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTT 62 F DV+RRFD ++YLLD GTASA+YL L RPLLLEGEPGVGKTTAAK LA VL Sbjct 5 FEDVADVVRRFDAEDYLLDLGTASALYLGAVLRRPLLLEGEPGVGKTTAAKALATVLGAP 64 Query 63 LIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRC 122 LIRLQCYEGLTANEALYDWNYQRQLL+IRLAE+RG G++ E DL+TE +L++RPIL C Sbjct 65 LIRLQCYEGLTANEALYDWNYQRQLLTIRLAESRGNGLT---EDDLFTEEFLLERPILHC 121 Query 123 VRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSR 182 VR+RGPTPPVLLIDEIDRADDEFEALLLEFLGE++VTVPELGTF AE P+ VLTSNRSR Sbjct 122 VRYRGPTPPVLLIDEIDRADDEFEALLLEFLGEASVTVPELGTFTAEHHPVVVLTSNRSR 181 Query 183 DLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGV 242 DLHDALRRRCLYHWIDYP P RAAAIVRRTV A+ LIE+AT+FV AR+LDLDKPPG+ Sbjct 182 DLHDALRRRCLYHWIDYPEPARAAAIVRRTVSVASELLIEHATRFVGRARELDLDKPPGI 241 Query 243 AETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQAFTECSHA 298 AETIDWV+AL ALGVADL A++SL ALAKTPDDRT ++D AF E +H Sbjct 242 AETIDWVSALAALGVADLV---REVAISSLSALAKTPDDRTMVQD---AFVEYAHG 291 >gi|111022201|ref|YP_705173.1| oxidoreductase [Rhodococcus jostii RHA1] gi|110821731|gb|ABG97015.1| possible oxidoreductase [Rhodococcus jostii RHA1] Length=295 Score = 416 bits (1069), Expect = 2e-114, Method: Compositional matrix adjust. Identities = 220/290 (76%), Positives = 246/290 (85%), Gaps = 6/290 (2%) Query 3 FASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTT 62 F DV+RRFD ++YLLD GTASA+YLA L RPLLLEGEPGVGKTTAAK LA VL Sbjct 5 FEDVADVVRRFDAEDYLLDFGTASALYLAAALRRPLLLEGEPGVGKTTAAKALATVLGAP 64 Query 63 LIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRC 122 LIRLQCYEGLTANEALYDWNYQRQLL+IRLAE+RG G++ E DL+TE +L++RPIL C Sbjct 65 LIRLQCYEGLTANEALYDWNYQRQLLTIRLAESRGDGLT---EDDLFTEEFLLERPILHC 121 Query 123 VRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSR 182 VR+RGPTPPVLLIDEIDRADDEFEALLLEFLGE++VTVPELGTF AE P+ VLTSNRSR Sbjct 122 VRYRGPTPPVLLIDEIDRADDEFEALLLEFLGEASVTVPELGTFTAEQHPVVVLTSNRSR 181 Query 183 DLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGV 242 DLHDALRRRCLYHWIDYP P RAAAIVRRTVP A +PLIE+AT FV AR+LDLDKPPG+ Sbjct 182 DLHDALRRRCLYHWIDYPEPARAAAIVRRTVPAAASPLIEHATCFVGRARELDLDKPPGI 241 Query 243 AETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQAF 292 AETIDWV+AL ALGVADL D A+ SL ALAKTPDDRT ++DA+ + Sbjct 242 AETIDWVSALAALGVADLVRDD---AIQSLSALAKTPDDRTIVQDAFADY 288 >gi|281191488|gb|ADA57157.1| unknown [Mycobacterium sp. DSM 3803] Length=298 Score = 402 bits (1034), Expect = 3e-110, Method: Compositional matrix adjust. Identities = 225/292 (78%), Positives = 247/292 (85%), Gaps = 6/292 (2%) Query 3 FASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTT 62 F DV+RRFDE +YLLDTGTASA++LA+ LGRPLLLEGEPGVGKT AAKTLA VLD Sbjct 9 FDDIGDVVRRFDEYDYLLDTGTASALFLAIALGRPLLLEGEPGVGKTAAAKTLAAVLDAP 68 Query 63 LIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRC 122 L+RLQCYEGLTA EALYDWNYQRQL+SIR+AEA I+ EADLYTEAYLVDRPIL+ Sbjct 69 LLRLQCYEGLTAAEALYDWNYQRQLMSIRVAEAHDAAIT---EADLYTEAYLVDRPILQA 125 Query 123 VRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSR 182 VR+RGP PVLLIDEIDRADDEFEALLLEFLGE+AVTVPELGTF A PI VLTSNRSR Sbjct 126 VRYRGPGVPVLLIDEIDRADDEFEALLLEFLGEAAVTVPELGTFAAPRTPIVVLTSNRSR 185 Query 183 DLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGV 242 DLHDALRRRCLYHWIDYP P+R+AAIVRR+VPGATA LI +A QFV R LD+DKPPGV Sbjct 186 DLHDALRRRCLYHWIDYPAPERSAAIVRRSVPGATAALIAHAAQFVGQTRGLDMDKPPGV 245 Query 243 AETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQAFTE 294 AETIDWVAALVALGVADLTA D+ ASLGALAKTPDDR + A+ +T+ Sbjct 246 AETIDWVAALVALGVADLTAPDAD---ASLGALAKTPDDRDTVASAFADYTK 294 >gi|312140396|ref|YP_004007732.1| carbon monoxide dehydrogenase accesory protein [Rhodococcus equi 103S] gi|325675994|ref|ZP_08155677.1| ATPase [Rhodococcus equi ATCC 33707] gi|311889735|emb|CBH49052.1| putative carbon monoxide dehydrogenase accesory protein [Rhodococcus equi 103S] gi|325553232|gb|EGD22911.1| ATPase [Rhodococcus equi ATCC 33707] Length=299 Score = 382 bits (980), Expect = 5e-104, Method: Compositional matrix adjust. Identities = 213/286 (75%), Positives = 246/286 (87%), Gaps = 6/286 (2%) Query 7 DDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLIRL 66 D +IRRFDE++YLLD GTA+A++LA+ LGRPLLLEGEPGVGKTTAAK LA L T L+RL Sbjct 13 DTLIRRFDERDYLLDEGTATALFLALQLGRPLLLEGEPGVGKTTAAKALAAALTTPLVRL 72 Query 67 QCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCVRHR 126 QCYEGL A+EALYDWNYQRQLL++R++EARG + EADL+TE +L++RPILRCVRHR Sbjct 73 QCYEGLGADEALYDWNYQRQLLAVRVSEARG---DRLQEADLFTEPFLLERPILRCVRHR 129 Query 127 GPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDLHD 186 GP PPVLLIDEIDRADDEFEALLLEFLGE+AVTVPE+GTF+A+ PPI VLTSNRSRDLHD Sbjct 130 GPIPPVLLIDEIDRADDEFEALLLEFLGEAAVTVPEIGTFVADRPPIVVLTSNRSRDLHD 189 Query 187 ALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVAETI 246 ALRRRCLYHWIDYP P+RAAAI+RRTVPGAT PLI + T F+ AR LDLDK PGVAE + Sbjct 190 ALRRRCLYHWIDYPAPERAAAILRRTVPGATQPLIASVTDFLGVARRLDLDKAPGVAEAV 249 Query 247 DWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQAF 292 DWV+AL ALG ADL AAD+ ASLGA+AKTPDDRT + +A A+ Sbjct 250 DWVSALAALGAADLVAADAL---ASLGAIAKTPDDRTVLAEAVTAY 292 >gi|315502810|ref|YP_004081697.1| ATPase [Micromonospora sp. L5] gi|315409429|gb|ADU07546.1| ATPase associated with various cellular activities AAA_3 [Micromonospora sp. L5] Length=289 Score = 363 bits (933), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 192/277 (70%), Positives = 214/277 (78%), Gaps = 6/277 (2%) Query 6 PDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLIR 65 P V RR D +YL D G A A++LA+ LG+PLLLEGEPGVGKT AAK LA LDTTLIR Sbjct 4 PQAVRRRLDAVDYLADDGMAMAVFLALELGKPLLLEGEPGVGKTAAAKALARALDTTLIR 63 Query 66 LQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCVRH 125 LQCYEGLT EALY+WNYQRQLL+IRLAEAR ++D ADL+ +L +RPILR VRH Sbjct 64 LQCYEGLTPGEALYEWNYQRQLLAIRLAEARHASLTD---ADLFAAEFLQERPILRAVRH 120 Query 126 RGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDLH 185 GP PPVLLIDEIDRADDEFEALL EFLGES +T+PELGTF A PP+ VLTSNRSRDLH Sbjct 121 PGPVPPVLLIDEIDRADDEFEALLFEFLGESGITIPELGTFTATTPPVVVLTSNRSRDLH 180 Query 186 DALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVAET 245 DALRRRCLYHWID+P DRA IVRR VPGAT LI AT FV R L LDK PG+AE Sbjct 181 DALRRRCLYHWIDFPQMDRATEIVRRAVPGATEGLIRTATAFVGDVRALGLDKAPGMAEA 240 Query 246 IDWVAALVALGVADLTAADSSPALASLGALAKTPDDR 282 IDWVAAL LG ADL+A D + ++G +AKTPDDR Sbjct 241 IDWVAALSVLGAADLSADD---VVRTIGTIAKTPDDR 274 >gi|302866399|ref|YP_003835036.1| ATPase [Micromonospora aurantiaca ATCC 27029] gi|302569258|gb|ADL45460.1| ATPase associated with various cellular activities AAA_3 [Micromonospora aurantiaca ATCC 27029] Length=289 Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 191/277 (69%), Positives = 214/277 (78%), Gaps = 6/277 (2%) Query 6 PDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLIR 65 P V RR D +YL D G A A++LA+ LG+PLLLEGEPGVGKT AAK LA LDTTLIR Sbjct 4 PQAVRRRLDAVDYLADDGMAMAVFLALELGKPLLLEGEPGVGKTAAAKALARALDTTLIR 63 Query 66 LQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCVRH 125 LQCY+GLT EALY+WNYQRQLL+IRLAEAR ++D ADL+ +L +RPILR VRH Sbjct 64 LQCYDGLTPGEALYEWNYQRQLLAIRLAEARHAPLTD---ADLFAAEFLQERPILRAVRH 120 Query 126 RGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDLH 185 GP PPVLLIDEIDRADDEFEALL EFLGES +T+PELGTF A PP+ VLTSNRSRDLH Sbjct 121 PGPVPPVLLIDEIDRADDEFEALLFEFLGESGITIPELGTFTATTPPVVVLTSNRSRDLH 180 Query 186 DALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVAET 245 DALRRRCLYHWID+P DRA IVRR VPGAT LI AT FV R L LDK PG+AE Sbjct 181 DALRRRCLYHWIDFPQMDRATEIVRRAVPGATEGLIRTATAFVGDVRALGLDKAPGMAEA 240 Query 246 IDWVAALVALGVADLTAADSSPALASLGALAKTPDDR 282 IDWVAAL LG ADL+A D + ++G +AKTPDDR Sbjct 241 IDWVAALSVLGAADLSADD---VVRTIGTIAKTPDDR 274 >gi|108797473|ref|YP_637670.1| putative oxidoreductase [Mycobacterium sp. MCS] gi|119866558|ref|YP_936510.1| putative oxidoreductase [Mycobacterium sp. KMS] gi|126433094|ref|YP_001068785.1| putative oxidoreductase [Mycobacterium sp. JLS] gi|108767892|gb|ABG06614.1| putative oxidoreductase [Mycobacterium sp. MCS] gi|119692647|gb|ABL89720.1| putative oxidoreductase [Mycobacterium sp. KMS] gi|126232894|gb|ABN96294.1| putative oxidoreductase [Mycobacterium sp. JLS] Length=234 Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 181/226 (81%), Positives = 194/226 (86%), Gaps = 4/226 (1%) Query 63 LIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRC 122 LIRLQCYEGL+A EALYDWNYQRQLLSIRLAEARG I+EADLY E YL DRPILRC Sbjct 6 LIRLQCYEGLSAGEALYDWNYQRQLLSIRLAEARG---DHITEADLYAEKYLADRPILRC 62 Query 123 VRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSR 182 VRH GPTPPVLLIDEIDRADDEFEALLLEFLGES+VTVPE+GTF+A PPIAVLTSNRSR Sbjct 63 VRHPGPTPPVLLIDEIDRADDEFEALLLEFLGESSVTVPEIGTFVAAVPPIAVLTSNRSR 122 Query 183 DLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGV 242 DLHDALRRRCLYHWIDYP P+RA AI+RRTVPGAT LIE A QFV AR+LDLDKPPG+ Sbjct 123 DLHDALRRRCLYHWIDYPQPERAVAILRRTVPGATTALIEQAAQFVGAARELDLDKPPGI 182 Query 243 AETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDA 288 AETIDWVAALV LGVA+L + + LA ALAKTPDDR +RDA Sbjct 183 AETIDWVAALVTLGVAELVESVDT-VLAGFSALAKTPDDRAVLRDA 227 >gi|116670583|ref|YP_831516.1| ATPase [Arthrobacter sp. FB24] gi|116610692|gb|ABK03416.1| ATPase associated with various cellular activities, AAA_5 [Arthrobacter sp. FB24] Length=307 Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 156/269 (58%), Positives = 191/269 (72%), Gaps = 6/269 (2%) Query 13 FDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLIRLQCYEGL 72 D+ +YL D G A+A++LAV L +P+LLEGE GVGKT AAK LA VL+T L RLQCYEG+ Sbjct 27 LDDVDYLADVGLATALFLAVRLPQPILLEGEAGVGKTEAAKALAHVLNTPLFRLQCYEGI 86 Query 73 TANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCVRHRGPTPPV 132 A EALY+WN+QRQLL IRLAE R ++ E+DL+ YL+ RP+L+ + H GP P V Sbjct 87 DAGEALYEWNHQRQLLGIRLAEVRDAALN---ESDLFGPQYLLRRPLLQAIEHPGPRPAV 143 Query 133 LLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDLHDALRRRC 192 LL+DEIDRAD EFEA E L E+AVT+PELGT A PP+ VLTSNR+RDLHDAL RRC Sbjct 144 LLLDEIDRADAEFEAFTFELLAEAAVTIPELGTIRATHPPVVVLTSNRTRDLHDALTRRC 203 Query 193 LYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVAETIDWVAAL 252 LYHWIDYP P R A IVRR VPG+ PL + A + R LD+ KPPG+AE IDWV+AL Sbjct 204 LYHWIDYPVPARIAEIVRRRVPGSAGPLAQEAASAITKMRSLDMAKPPGIAEAIDWVSAL 263 Query 253 VALGVADLTAADSSPALASLGALAKTPDD 281 LG+ T D+ + G++ K DD Sbjct 264 SVLGI---THIDAPTVEKTWGSIVKNRDD 289 >gi|108802968|ref|YP_642905.1| ATPase [Rubrobacter xylanophilus DSM 9941] gi|108764211|gb|ABG03093.1| ATPase associated with various cellular activities, AAA_5 [Rubrobacter xylanophilus DSM 9941] Length=314 Score = 298 bits (764), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 155/280 (56%), Positives = 199/280 (72%), Gaps = 9/280 (3%) Query 8 DVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLIRLQ 67 +++RRFD YL D G A+AI+LA+ LGRPL LEGE GVGKT AK L+ +L+T LIRLQ Sbjct 24 ELLRRFD---YLADEGLATAIFLALRLGRPLFLEGEAGVGKTEVAKVLSRMLETPLIRLQ 80 Query 68 CYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDIS--EADLYTEAYLVDRPILRCVRH 125 CYEG+ +ALY+W+Y RQLL IR AEA G G D E DLY +L+ RP+L+ + H Sbjct 81 CYEGIDVYQALYEWDYARQLLHIRAAEAFG-GAEDRERVERDLYNREFLISRPLLQALEH 139 Query 126 RGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDLH 185 GP+PPVLLIDE+DR+DDEFEA LLE L + AVT+PELGT AE PP+AVLTSNR+R++H Sbjct 140 EGPSPPVLLIDEVDRSDDEFEAFLLEILSDFAVTIPELGTIRAERPPVAVLTSNRTREVH 199 Query 186 DALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVAET 245 DAL+RRCLY++I++P +R IVR VP A L V R++DL KPPGVAET Sbjct 200 DALKRRCLYYYIEHPSFEREVEIVRLRVPEAEERLARQVAAAVQRLREMDLYKPPGVAET 259 Query 246 IDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQI 285 +DW ALVALG +L D A+LG++ K +D+ ++ Sbjct 260 LDWTEALVALGAKEL---DERLVQATLGSVLKYHEDQQRV 296 >gi|284044484|ref|YP_003394824.1| ATPase associated with various cellular activities AAA_5 [Conexibacter woesei DSM 14684] gi|283948705|gb|ADB51449.1| ATPase associated with various cellular activities AAA_5 [Conexibacter woesei DSM 14684] Length=308 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 161/289 (56%), Positives = 199/289 (69%), Gaps = 8/289 (2%) Query 1 VTFASPD--DVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVV 58 V A PD ++ R D +YL D G A+A++ A+ + +PLLLEGE GVGKT AAK LA + Sbjct 13 VRAAVPDVETLLARLDAVDYLADEGLATALFFALRMPQPLLLEGEAGVGKTEAAKALAAL 72 Query 59 LDTTLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRP 118 L T LIRLQCYEG+ A EALY+WNY RQLL IRLAE+ G+ +S E L++E YL+ RP Sbjct 73 LRTPLIRLQCYEGIDAAEALYEWNYPRQLLRIRLAESEGEAVS---EERLFSEDYLIRRP 129 Query 119 ILRCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTS 178 +L+ + H GP P VLLIDE+DRADD+FEA LLE L E+ +T+PELGT A PP VLTS Sbjct 130 LLQAIVHPGPLPAVLLIDELDRADDDFEAFLLELLAEATITIPELGTVRATHPPAVVLTS 189 Query 179 NRSRDLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDK 238 NR+RDLHDAL+RRCLYHWIDYP +R IVRR VP A L + V R +L K Sbjct 190 NRTRDLHDALKRRCLYHWIDYPSAEREVEIVRRRVPEAARELAVDVATAVRRLRGGELQK 249 Query 239 PPGVAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRD 287 PPG+AE IDWVAAL LGV L D A +LGA+ K +D+ +R+ Sbjct 250 PPGIAEAIDWVAALRLLGVMRL---DPVAAERTLGAVLKYREDQQLVRE 295 >gi|291295908|ref|YP_003507306.1| ATPase associated with various cellular activities AAA_5 [Meiothermus ruber DSM 1279] gi|290470867|gb|ADD28286.1| ATPase associated with various cellular activities AAA_5 [Meiothermus ruber DSM 1279] Length=299 Score = 281 bits (720), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 135/277 (49%), Positives = 186/277 (68%), Gaps = 3/277 (1%) Query 5 SPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLI 64 S + + + Y+ D G + A++LA+ LGRPLLLEGEPGVGKT K LA VL T LI Sbjct 5 SVQETQKALEAHRYIADKGLSVAVFLALKLGRPLLLEGEPGVGKTEIVKVLAEVLSTRLI 64 Query 65 RLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCVR 124 RLQCYEGL + A+Y+W+Y RQ++ IRL EA G+ + +++++ +L+ RP+L+ + Sbjct 65 RLQCYEGLDISSAVYEWDYARQMMQIRLLEASGERDQEKVRHEVFSQEFLLKRPLLQALE 124 Query 125 HRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDL 184 PVLLIDE+DRAD+EFEA LLEFL + +TVPE+GT A+ PP+ V+TSNR+R++ Sbjct 125 STNGKAPVLLIDELDRADEEFEAFLLEFLSDWQITVPEVGTLKAQQPPVVVITSNRTREI 184 Query 185 HDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVAE 244 HDAL+RRC+Y+WIDYP ++ IV+ VPG L + A FV R DL K PGVAE Sbjct 185 HDALKRRCMYYWIDYPSFEKEYRIVQEKVPGVPEKLAQQAVAFVQALRQQDLYKAPGVAE 244 Query 245 TIDWVAALVALGVADLTAADSSPALASLGALAKTPDD 281 T+DW ++L+ALG +L+ +LG L K DD Sbjct 245 TLDWASSLLALGQTELSLEVIEE---TLGVLLKYQDD 278 >gi|297567082|ref|YP_003686054.1| ATPase [Meiothermus silvanus DSM 9946] gi|296851531|gb|ADH64546.1| ATPase associated with various cellular activities AAA_5 [Meiothermus silvanus DSM 9946] Length=314 Score = 281 bits (719), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 140/288 (49%), Positives = 190/288 (66%), Gaps = 7/288 (2%) Query 5 SPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLI 64 S ++ + + +Y+ + G A +++LA+ LGRPLLLEGEPGVGKT K LA +L T LI Sbjct 20 SIEETQKALEAHHYITEKGLAVSVFLALKLGRPLLLEGEPGVGKTEIVKVLADMLQTRLI 79 Query 65 RLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCVR 124 RLQCYEGL N A+Y+W+Y RQ++ IRL EA G+ ++++ +L++RP+L+ ++ Sbjct 80 RLQCYEGLDINNAVYEWDYARQMMQIRLLEASGERDQSKVRHEVFSSEFLLERPLLQALK 139 Query 125 HRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDL 184 PPVLLIDE+DRAD+EFEA LLEFL + +T+PE+GT AE PP+ V+TSNR+R++ Sbjct 140 SVNGKPPVLLIDELDRADEEFEAFLLEFLSDWQITIPEVGTVKAEKPPVVVITSNRTREI 199 Query 185 HDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVAE 244 HDAL+RRCLY WIDYP + IVR VPG L FV R DL K PGVAE Sbjct 200 HDALKRRCLYFWIDYPDFQKEYRIVREKVPGVPEKLAAQVVAFVQELRKEDLYKAPGVAE 259 Query 245 TIDWVAALVALGVADLTAADSSPALA--SLGALAKTPDDRTQIRDAYQ 290 T+DW ++L+AL L PAL +LG L K DD + ++A Q Sbjct 260 TLDWASSLMALDAVRL-----EPALVEETLGVLLKYQDDVVRAKNAAQ 302 >gi|219849328|ref|YP_002463761.1| ATPase [Chloroflexus aggregans DSM 9485] gi|219543587|gb|ACL25325.1| ATPase associated with various cellular activities AAA_5 [Chloroflexus aggregans DSM 9485] Length=302 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 139/285 (49%), Positives = 188/285 (66%), Gaps = 3/285 (1%) Query 2 TFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDT 61 +FAS D++ E Y+ D +AI+LA+ L +PLLLEGE GVGKT AKTLA + Sbjct 5 SFASIDELQAVLAEHAYIADRALTTAIFLALKLNKPLLLEGEAGVGKTEIAKTLARMQGR 64 Query 62 TLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILR 121 LIRLQCYEGL N +Y+WNY RQ+L IRL EA+G + ++ ++ +L+ RP+L+ Sbjct 65 ELIRLQCYEGLDVNTTIYEWNYARQMLQIRLLEAQGAAQNTAAQQSIFGPEFLIKRPLLQ 124 Query 122 CVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRS 181 + RG PP+LLIDE+DRAD+ FEA LLE L + +++PE+GT AE PP ++TSNR+ Sbjct 125 AIEARGDQPPILLIDELDRADEAFEAFLLELLADWQISIPEIGTIRAETPPTVIITSNRT 184 Query 182 RDLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPG 241 R++HDAL+RRCL++W+DYP D+ IV+ VPGA+ L V R +DL K PG Sbjct 185 REVHDALKRRCLFYWVDYPTLDKEIQIVKARVPGASERLARQVVLVVQELRRMDLYKLPG 244 Query 242 VAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIR 286 VAET+DWV ALVAL +LT +LGA+ K DD Q+R Sbjct 245 VAETLDWVTALVALDQTELTPQAVED---TLGAILKYQDDIAQVR 286 >gi|148656291|ref|YP_001276496.1| ATPase [Roseiflexus sp. RS-1] gi|148568401|gb|ABQ90546.1| ATPase associated with various cellular activities, AAA_5 [Roseiflexus sp. RS-1] Length=296 Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 143/288 (50%), Positives = 189/288 (66%), Gaps = 7/288 (2%) Query 1 VTFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLD 60 + FA+ DD+ + NY+ D A+AI+LA+ L +PLLLEGE GVGKT AKTLA + D Sbjct 1 MQFATIDDLQQALAAHNYIADRPLATAIFLALKLQKPLLLEGEAGVGKTEIAKTLARMQD 60 Query 61 TTLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPIL 120 LIRLQCYEGL N +Y+WNY RQ+L IRL EA G + + ++++ +L+ RP+L Sbjct 61 RHLIRLQCYEGLDVNTTIYEWNYTRQMLQIRLIEALGGSDAHAALNEIFSPEFLIKRPLL 120 Query 121 RCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNR 180 + + PPVLLIDEIDRAD+EFEA LLE L + +++PE+GT A PP ++TSNR Sbjct 121 QAIEESWERPPVLLIDEIDRADEEFEAFLLELLSDWQISIPEIGTIRASQPPTVIITSNR 180 Query 181 SRDLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPP 240 +R++HDAL+RRCL++WIDYP D+ IV VPGA+ L FV R LDL K P Sbjct 181 TREIHDALKRRCLFYWIDYPSLDKELRIVNARVPGASDRLSRQVVAFVHELRKLDLFKLP 240 Query 241 GVAETIDWVAALVALGVADLTAADSSPALA--SLGALAKTPDDRTQIR 286 GVAET+DW AL AL +LT P + +LGA+ K DD Q+R Sbjct 241 GVAETLDWTTALTALDARELT-----PEMVEDTLGAILKYQDDIAQVR 283 >gi|345304204|ref|YP_004826106.1| ATPase [Rhodothermus marinus SG0.5JP17-172] gi|345113437|gb|AEN74269.1| ATPase associated with various cellular activities AAA_5 [Rhodothermus marinus SG0.5JP17-172] Length=305 Score = 279 bits (713), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 141/267 (53%), Positives = 186/267 (70%), Gaps = 4/267 (1%) Query 16 QNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLIRLQCYEGLTAN 75 +Y+ + G A+ I+LA+ + RPL LEGEPGVGKT AK LA +L LIRLQCYEGL + Sbjct 20 HDYVAERGLATTIFLALRMRRPLFLEGEPGVGKTEVAKVLARMLRVPLIRLQCYEGLDVH 79 Query 76 EALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCVRH-RGPTPPVLL 134 A+Y+WNY RQLL IRLAEA G+ + A++++ +L+ RP+L+ V+ R PVLL Sbjct 80 TAVYEWNYARQLLEIRLAEASGQVDRNRLLAEIFSPDFLIARPLLQAVQQSRDGQAPVLL 139 Query 135 IDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDLHDALRRRCLY 194 IDE+DR+D+EFEA LLE L + +++PELGT AE PP+ V+TSNR+R++HDAL+RRCLY Sbjct 140 IDELDRSDEEFEAFLLELLSDFQISIPELGTVRAEVPPVVVITSNRTREIHDALKRRCLY 199 Query 195 HWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVAETIDWVAALVA 254 +W++YP ++ AIVRR VPG L FV R DL KPPGVAET+DW AL+A Sbjct 200 YWVEYPSFEKELAIVRRRVPGLAEQLARQVVAFVQALRQEDLYKPPGVAETLDWAEALLA 259 Query 255 LGVADLTAADSSPALASLGALAKTPDD 281 L ++L AA S +LGAL K DD Sbjct 260 LDRSELDAATVS---ETLGALLKYRDD 283 >gi|90419154|ref|ZP_01227064.1| moxR-like ATPase [Aurantimonas manganoxydans SI85-9A1] gi|90336091|gb|EAS49832.1| moxR-like ATPase [Aurantimonas manganoxydans SI85-9A1] Length=305 Score = 278 bits (712), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 145/295 (50%), Positives = 185/295 (63%), Gaps = 5/295 (1%) Query 5 SPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLI 64 S D+ + D QNY+ D A+ ++LA+ +GRPL LEGE GVGKT AK LA LD LI Sbjct 8 SIDETEQLLDSQNYVADRALATVLFLALKMGRPLFLEGEAGVGKTEIAKVLAAALDRPLI 67 Query 65 RLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCVR 124 RLQCYEGL + ALY+WNY Q++ IR+ EA G D +++++E +L+ RPIL+ + Sbjct 68 RLQCYEGLDVSSALYEWNYAAQMIEIRMREASGDISRDAMRSEIFSERFLIRRPILQALE 127 Query 125 HRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDL 184 PVLLIDE+DR D+ FEA LLE L ++ VT+PELGT A PPI V+T+NR+R++ Sbjct 128 GEPGRAPVLLIDELDRTDEAFEAFLLEILSDNQVTIPELGTIRAAEPPIVVITTNRTREI 187 Query 185 HDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVAE 244 HDAL+RRCLYHW+DYP DR IVRR P A A L FV R +DL K PGVAE Sbjct 188 HDALKRRCLYHWVDYPASDRELDIVRRKAPRANAELSAELVAFVQRLRGIDLFKAPGVAE 247 Query 245 TIDWVAALVALGVADLTAADSSPALASLGALAKTPDD--RTQIRDAYQAFTECSH 297 TIDW AL L L A S +LG L K DD R + ++ + TE Sbjct 248 TIDWANALTELNAVALDPAHVSD---TLGVLLKYQDDIQRMERGESREILTEVKR 299 >gi|268317924|ref|YP_003291643.1| ATPase [Rhodothermus marinus DSM 4252] gi|262335458|gb|ACY49255.1| ATPase associated with various cellular activities AAA_5 [Rhodothermus marinus DSM 4252] Length=305 Score = 278 bits (712), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 141/267 (53%), Positives = 186/267 (70%), Gaps = 4/267 (1%) Query 16 QNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLIRLQCYEGLTAN 75 +Y+ + G A+ I+LA+ + RPL LEGEPGVGKT AK LA +L LIRLQCYEGL + Sbjct 20 HDYVAERGLATTIFLALRMRRPLFLEGEPGVGKTEVAKVLARMLRVPLIRLQCYEGLDVH 79 Query 76 EALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCVRH-RGPTPPVLL 134 A+Y+WNY RQLL IRLAEA G+ + A++++ +L+ RP+L+ V+ R PVLL Sbjct 80 TAVYEWNYARQLLEIRLAEASGQVDRNRLLAEIFSPDFLIARPLLQAVQQSRDGQAPVLL 139 Query 135 IDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDLHDALRRRCLY 194 IDE+DR+D+EFEA LLE L + +++PELGT AE PP+ V+TSNR+R++HDAL+RRCLY Sbjct 140 IDELDRSDEEFEAFLLELLSDFQISIPELGTVRAEVPPVVVITSNRTREIHDALKRRCLY 199 Query 195 HWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVAETIDWVAALVA 254 +W++YP ++ AIVRR VPG L FV R DL KPPGVAET+DW AL+A Sbjct 200 YWVEYPSFEKELAIVRRRVPGLAEQLARQVVAFVQALRREDLYKPPGVAETLDWAEALLA 259 Query 255 LGVADLTAADSSPALASLGALAKTPDD 281 L ++L AA S +LGAL K DD Sbjct 260 LDRSELDAATVS---ETLGALLKYRDD 283 >gi|163846561|ref|YP_001634605.1| ATPase [Chloroflexus aurantiacus J-10-fl] gi|222524352|ref|YP_002568823.1| ATPase [Chloroflexus sp. Y-400-fl] gi|163667850|gb|ABY34216.1| ATPase associated with various cellular activities AAA_5 [Chloroflexus aurantiacus J-10-fl] gi|222448231|gb|ACM52497.1| ATPase associated with various cellular activities AAA_5 [Chloroflexus sp. Y-400-fl] Length=302 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 138/285 (49%), Positives = 188/285 (66%), Gaps = 3/285 (1%) Query 2 TFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDT 61 +FA+ D++ Y+ D +AI+LA+ L +PLLLEGE GVGKT AKTLA + Sbjct 5 SFATIDELQAALAAHAYIADRALTTAIFLALKLNKPLLLEGEAGVGKTEIAKTLARMQGR 64 Query 62 TLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILR 121 LIRLQCYEGL N +Y+WNY RQ+L IRL EA+G + ++ ++ +L+ RP+L+ Sbjct 65 ELIRLQCYEGLDVNTTIYEWNYARQMLQIRLLEAQGAAQNTAAQQSIFGPEFLIKRPLLQ 124 Query 122 CVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRS 181 + RG PP+LLIDE+DRAD+EFEA LLE L + +++PE+GT AE PP ++TSNR+ Sbjct 125 AIEARGDQPPILLIDELDRADEEFEAFLLELLSDWQISIPEIGTIRAEVPPTVIITSNRT 184 Query 182 RDLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPG 241 R++HDAL+RRCL++W+DYP D+ IV+ VPGA+ L V R +DL K PG Sbjct 185 REVHDALKRRCLFYWVDYPTLDKEIQIVKARVPGASERLARQVVLVVQELRRMDLYKLPG 244 Query 242 VAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIR 286 VAET+DWV ALVAL +LT +LGA+ K DD Q+R Sbjct 245 VAETLDWVTALVALDQTELTPQAVED---TLGAILKYQDDIAQVR 286 >gi|269837430|ref|YP_003319658.1| ATPase associated with various cellular activities AAA_5 [Sphaerobacter thermophilus DSM 20745] gi|269786693|gb|ACZ38836.1| ATPase associated with various cellular activities AAA_5 [Sphaerobacter thermophilus DSM 20745] Length=321 Score = 276 bits (706), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 144/282 (52%), Positives = 194/282 (69%), Gaps = 5/282 (1%) Query 5 SPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLI 64 S + V + Q Y+ + A+AI+LA+ L +PLLLEGE GVGKT AK LA +LDT LI Sbjct 28 SVEAVQKALATQRYVCEESLATAIFLALRLPKPLLLEGEAGVGKTEVAKVLAAILDTDLI 87 Query 65 RLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCVR 124 RLQCYEGL + A+Y+WNY RQ+L+IR+ E + + E ++++ YL++RP+L+ VR Sbjct 88 RLQCYEGLDVSHAVYEWNYPRQMLAIRILEDKSVARDEAME-EIFSSDYLIERPLLQAVR 146 Query 125 HRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDL 184 H+G P VLLIDEIDRAD+EFEA LLE L + +T+PE+GT AE PPI ++TSNR+R+L Sbjct 147 HKGKAP-VLLIDEIDRADEEFEAFLLELLSDFQITIPEIGTIRAETPPIVIITSNRTREL 205 Query 185 HDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVAE 244 HDAL+RRCLYHWIDYP ++ I+ VPG + L + F+ R DL K PGVAE Sbjct 206 HDALKRRCLYHWIDYPNVEKELRIITAKVPGISERLAQQVAVFIHQLRREDLYKLPGVAE 265 Query 245 TIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIR 286 T+DW AAL+AL +L+ +S A+LGA+ K +D IR Sbjct 266 TLDWAAALLALNQQELSTEIAS---ATLGAILKHQEDVQAIR 304 >gi|296269362|ref|YP_003651994.1| ATPase [Thermobispora bispora DSM 43833] gi|296092149|gb|ADG88101.1| ATPase associated with various cellular activities AAA_5 [Thermobispora bispora DSM 43833] Length=318 Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 146/281 (52%), Positives = 193/281 (69%), Gaps = 6/281 (2%) Query 5 SPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLI 64 SP + D +YL D G +A++LA+ +GRPLLLEGEPGVGKT AKTLA VL LI Sbjct 13 SPARLAEVLDHHDYLADDGLVTAVFLALKMGRPLLLEGEPGVGKTELAKTLAAVLGAPLI 72 Query 65 RLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCVR 124 RLQCYEG+ A +ALYDW++ RQLL ++ AEA G + E ++Y +L+ RP+LR + Sbjct 73 RLQCYEGIDAAQALYDWDFARQLLHLKAAEAAGATDAAALEDEIYQRRFLIARPLLRALE 132 Query 125 HRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDL 184 + P VLLIDEIDRADDEFEA LLE L + +++PELGT AE PP+ V+TSNR+R++ Sbjct 133 TQ---PSVLLIDEIDRADDEFEAFLLEILSDYTISIPELGTIKAERPPVVVITSNRTREV 189 Query 185 HDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVAE 244 HDAL+RRCLYHW+++PG +R AI+ R +PG T L + R+ DL KPPGVAE Sbjct 190 HDALKRRCLYHWLEHPGFEREVAILLRRLPGCTERLARDVAAAAQRLREADLVKPPGVAE 249 Query 245 TIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQI 285 T+DW AL+ LG +L D A A+LGA+ K +D+T + Sbjct 250 TLDWAEALLNLGATEL---DPGLAAATLGAVLKYREDQTAV 287 >gi|298242136|ref|ZP_06965943.1| ATPase associated with various cellular activities AAA_3 [Ktedonobacter racemifer DSM 44963] gi|297555190|gb|EFH89054.1| ATPase associated with various cellular activities AAA_3 [Ktedonobacter racemifer DSM 44963] Length=314 Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 136/280 (49%), Positives = 187/280 (67%), Gaps = 4/280 (1%) Query 2 TFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDT 61 + AS +DV R QNY+ D A+ I+LA+ +PLLLEGEPGVGKT AK LA +LDT Sbjct 19 SLASIEDVQRAMFAQNYIADRSLATTIFLALKRRKPLLLEGEPGVGKTEIAKVLASLLDT 78 Query 62 TLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILR 121 LIRLQCYEG+ + A+Y+WNY RQ+L IRL E+ +G + +++ +L+ RP+L+ Sbjct 79 HLIRLQCYEGIDVSTAVYEWNYTRQMLHIRLMESGAQGRQE-ELKEIFGPDFLLQRPLLQ 137 Query 122 CVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRS 181 + PPVLLIDE+DR+D+EFEA LLE L + +T+PE+GT A+ PP ++TSNR+ Sbjct 138 AISPTNAKPPVLLIDELDRSDEEFEAYLLELLSDFQITIPEIGTIRAQEPPFVIITSNRT 197 Query 182 RDLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPG 241 R++HDALRRRCLY+WIDYP ++ +IVR +P A L FV R +DL K PG Sbjct 198 REIHDALRRRCLYYWIDYPTLEKEYSIVRARMPEAPEQLARQVCAFVGEIRSMDLYKAPG 257 Query 242 VAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDD 281 +AET+DW+++L+AL +L +LGAL K DD Sbjct 258 IAETLDWLSSLLALHQLELVEGTVRD---TLGALLKYQDD 294 >gi|156741436|ref|YP_001431565.1| ATPase [Roseiflexus castenholzii DSM 13941] gi|156232764|gb|ABU57547.1| ATPase associated with various cellular activities AAA_5 [Roseiflexus castenholzii DSM 13941] Length=296 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 139/284 (49%), Positives = 185/284 (66%), Gaps = 3/284 (1%) Query 3 FASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTT 62 F + D++ + +Y+ D +AI+LA+ L +PLLLEGE GVGKT AKTLA + D Sbjct 3 FTTIDELQQALAAHHYIADRPLTTAIFLALKLQKPLLLEGEAGVGKTEIAKTLARMQDRH 62 Query 63 LIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRC 122 LIRLQCYEGL N +Y+WNY RQ++ IRL EA G + + ++++ +L+ RP+L+ Sbjct 63 LIRLQCYEGLDVNTTIYEWNYTRQMVQIRLIEALGAADAHAALNEIFSPEFLIKRPLLQA 122 Query 123 VRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSR 182 + PPVLLIDEIDRAD+EFEA LLE L + +++PE+GT A PP V+TSNR+R Sbjct 123 IEESWERPPVLLIDEIDRADEEFEAFLLELLSDWQISIPEIGTIRASQPPTVVITSNRTR 182 Query 183 DLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGV 242 ++HDAL+RRCL++WIDYP D+ IV VPGA+ L FV R LDL K PGV Sbjct 183 EIHDALKRRCLFYWIDYPSLDKELQIVNAKVPGASERLSRQVVAFVHELRKLDLFKLPGV 242 Query 243 AETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIR 286 AET+DW AL AL +LTA +LGA+ K DD Q+R Sbjct 243 AETLDWTTALTALDARELTA---DLVEDTLGAILKYQDDIAQVR 283 >gi|227822074|ref|YP_002826045.1| putative ATPase, AAA family [Sinorhizobium fredii NGR234] gi|227341074|gb|ACP25292.1| putative ATPase, AAA family [Sinorhizobium fredii NGR234] Length=312 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 139/284 (49%), Positives = 178/284 (63%), Gaps = 3/284 (1%) Query 5 SPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLI 64 S D+ + QNYL T A+ ++LA+ + RPL LEGE GVGKT AK LA LD LI Sbjct 12 SIDETMALLKSQNYLAGTALATVLFLALRMKRPLFLEGEAGVGKTEIAKVLARSLDRPLI 71 Query 65 RLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCVR 124 RLQCYEGL A+Y+WNY Q+L IRL+EA G E+ +++E +L+ RP+L+ + Sbjct 72 RLQCYEGLDVASAVYEWNYPAQMLEIRLSEAAGMVDRQKVESGIFSERFLIRRPVLQAIS 131 Query 125 HRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDL 184 G PV LIDE+DR D+ FEA LLE L + VT+PELGT A+ PPI ++T+NR+R++ Sbjct 132 ANGGRAPVFLIDELDRTDEAFEAFLLEVLSDFQVTIPELGTIRADEPPIVIITTNRTREI 191 Query 185 HDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVAE 244 HDAL+RRCLYHW+DYP + I+RR VPG A L +V R +DL K PGVAE Sbjct 192 HDALKRRCLYHWVDYPNAAQELEIIRRKVPGCNAALSREIVAYVQKLRTVDLFKNPGVAE 251 Query 245 TIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDA 288 TIDW AL L D A D +LG L K DD +I A Sbjct 252 TIDWATALTEL---DALALDPETLADTLGTLLKYQDDIARIEGA 292 >gi|110633643|ref|YP_673851.1| ATPase [Mesorhizobium sp. BNC1] gi|110284627|gb|ABG62686.1| ATPase associated with various cellular activities, AAA_5 [Chelativorans sp. BNC1] Length=309 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 135/287 (48%), Positives = 182/287 (64%), Gaps = 3/287 (1%) Query 5 SPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLI 64 S D+ + +E +Y+ D A+ ++LA+ + RPL LEGE GVGKT AK LA L LI Sbjct 12 SIDETVTLLNEADYVADRALATVVFLALKMQRPLFLEGEAGVGKTEIAKVLAQSLGRRLI 71 Query 65 RLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCVR 124 RLQCYEGL + A+Y+WNY Q++ IR+ EA G D+ E ++++E YL+ RP+L + Sbjct 72 RLQCYEGLDVSSAVYEWNYAGQMIEIRMEEAAGVADRDVMEHNVFSEKYLIRRPVLEALT 131 Query 125 HRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDL 184 PV LIDE+DR D+ FEA LLE L + VTVPELGT AE PPI V+T+NR+R++ Sbjct 132 GTPGAAPVFLIDELDRTDEAFEAFLLEILSDYQVTVPELGTIRAEEPPIVVITTNRTREI 191 Query 185 HDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVAE 244 HDAL+RRCLYHW++YP +R IV R VP A + L + ++ R +DL K PGVAE Sbjct 192 HDALKRRCLYHWVNYPDAERELEIVHRKVPQANSRLSQEVVAYIQRLRGMDLFKVPGVAE 251 Query 245 TIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQA 291 +IDW +AL L D A D +LG L K DD ++R+ A Sbjct 252 SIDWASALAEL---DKVALDPETVSDTLGVLLKYQDDIARLREGESA 295 >gi|134097144|ref|YP_001102805.1| ATPase [Saccharopolyspora erythraea NRRL 2338] gi|291005399|ref|ZP_06563372.1| ATPase [Saccharopolyspora erythraea NRRL 2338] gi|133909767|emb|CAL99879.1| ATPase associated with various cellular activities, AAA_5 [Saccharopolyspora erythraea NRRL 2338] Length=291 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 147/290 (51%), Positives = 193/290 (67%), Gaps = 8/290 (2%) Query 3 FASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTT 62 SP DV D YL D G A+A +L++ + RPLL EGEPG GKT A+ LA LD Sbjct 8 MKSPADVAAALDATGYLPDDGIATAAFLSMRMRRPLLCEGEPGTGKTALAQALASALDVE 67 Query 63 LIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGI--SDISEADLYTEAYLVDRPIL 120 LIRLQC+EG+ A +ALYDW++ RQLL +R EA G D +E+ LYT +L+DRP+L Sbjct 68 LIRLQCHEGIDAAQALYDWDFPRQLLHLRTLEAASGGSLDPDAAESSLYTSRFLLDRPLL 127 Query 121 RCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNR 180 R +R P VLL+DEIDRADDEFEA LLE L E +V++PE G A PPI VLTSNR Sbjct 128 RALRE---APCVLLVDEIDRADDEFEAFLLEVLSEYSVSIPEYGVVRAAEPPIVVLTSNR 184 Query 181 SRDLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPP 240 +R++HDAL+RRCLYHW+++PG +R AI+RR +PG L E V R L+L KPP Sbjct 185 TREVHDALKRRCLYHWLEHPGLEREVAILRRRLPGLDERLAEQVAAAVQRMRQLELLKPP 244 Query 241 GVAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDAYQ 290 GVAE +DW +L+ALG +L D+ A ++LGA+ K +D ++R ++ Sbjct 245 GVAEALDWAQSLLALGKDEL---DTEVAASTLGAVLKYREDAERVRAEWE 291 >gi|119718194|ref|YP_925159.1| ATPase [Nocardioides sp. JS614] gi|119538855|gb|ABL83472.1| ATPase associated with various cellular activities, AAA_5 [Nocardioides sp. JS614] Length=294 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 146/290 (51%), Positives = 187/290 (65%), Gaps = 11/290 (3%) Query 4 ASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTL 63 +SP DV R YL D A+ YLA+ + RPLLLEGEPG GKT A+ +A L+ L Sbjct 4 SSPADVAARLGATGYLSDDALATVTYLALRMQRPLLLEGEPGTGKTALAEAIAESLELPL 63 Query 64 IRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGIS----DISEADLYTEAYLVDRPI 119 +RLQCYEG+ A +ALYDW++ RQ+L +R EA G G + +E LY +L+ RP+ Sbjct 64 VRLQCYEGIDATQALYDWDFPRQILHLRALEAAGGGRDGQGVEEAEKSLYDARFLLARPV 123 Query 120 LRCVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSN 179 LR ++ +P VLL+DE+DRADDEFEA LLE L V++PELGT A PPI VLTSN Sbjct 124 LRALQE---SPAVLLVDEVDRADDEFEAFLLEVLSTYQVSIPELGTVRASTPPIVVLTSN 180 Query 180 RSRDLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDL-DLDK 238 R+R+LHDAL+RRCLYHWID+PG +R I+R P + L + V R DL K Sbjct 181 RTRELHDALKRRCLYHWIDHPGLEREVEILRSRAPEVSETLRRQVVELVQQLRGRDDLQK 240 Query 239 PPGVAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDA 288 PPGVAET+DW AL LG AD+ A +S A+LGAL K +D ++R A Sbjct 241 PPGVAETLDWARALHHLGTADIDLATAS---ATLGALVKYREDADRVRHA 287 >gi|118431784|ref|NP_148466.2| CoxD-like protein [Aeropyrum pernix K1] gi|116063106|dbj|BAA81232.2| CoxD homolog [Aeropyrum pernix K1] Length=298 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 141/257 (55%), Positives = 177/257 (69%), Gaps = 3/257 (1%) Query 5 SPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLI 64 +P+ + ++Y+ A+YLA+ LG+PLL+EGEPG GKT AK LA L T LI Sbjct 14 TPEKLEELLRSRDYIPSRDLLMALYLALKLGKPLLVEGEPGNGKTELAKVLAEALGTELI 73 Query 65 RLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCVR 124 RLQCYEG+ A++ALYDWNY +QLL+IR+ E G + I E ++Y+E YLV P+LR V Sbjct 74 RLQCYEGIDASQALYDWNYPKQLLAIRMLERSGD-VESI-EREIYSEKYLVKGPLLRAVT 131 Query 125 HRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDL 184 HRGP PPVLLIDEIDRAD+EFEA LLEFL E VTVPE+GTF AE PI V+TSNR+R++ Sbjct 132 HRGPKPPVLLIDEIDRADEEFEAFLLEFLAEFQVTVPEIGTFRAERRPIVVITSNRTREV 191 Query 185 HDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTAR-DLDLDKPPGVA 243 + LRRRCLY ++ YP +R IV R V GA L+E A V R ++ K PGV+ Sbjct 192 GEGLRRRCLYVYVTYPPKEREVEIVMRRVRGAERRLVEKAVDVVARIRASQEVLKKPGVS 251 Query 244 ETIDWVAALVALGVADL 260 ETIDWV L ALG D+ Sbjct 252 ETIDWVQGLQALGYRDI 268 >gi|315427130|dbj|BAJ48745.1| ATPase [Candidatus Caldiarchaeum subterraneum] Length=295 Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 132/284 (47%), Positives = 194/284 (69%), Gaps = 6/284 (2%) Query 5 SPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLI 64 +P+ +++ +++ Y+ D A A+YLA+ L +PLL+EGEPG GKT AK LA +L+T LI Sbjct 13 TPEILVKEMEKELYVADEPLALAVYLALKLEKPLLIEGEPGCGKTEVAKVLARLLNTELI 72 Query 65 RLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCVR 124 RLQCYEG+TA++ALY+W+Y RQL++IRL E + K + +I+E ++++E +L+ RP+L + Sbjct 73 RLQCYEGITASQALYEWDYPRQLINIRLLEDK-KSVDEITE-EIFSEKFLLKRPLLAALL 130 Query 125 HRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDL 184 + GP PPVLLIDEIDR+D+EFE LLEFL E VT+PELGT A+ P+ ++TSNR+R++ Sbjct 131 YEGPNPPVLLIDEIDRSDEEFEGFLLEFLAEFQVTIPELGTIKAKKKPVVIITSNRTREV 190 Query 185 HDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDL-DLDKPPGVA 243 D LRRRCLY ++ YP P++ I+ VP + L FV R + +L K PG++ Sbjct 191 GDGLRRRCLYLYVTYPSPEKEMKILSLKVPQLSPKLAAEVVNFVQKLRQIGELAKKPGIS 250 Query 244 ETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRD 287 ET+DW AL LG ++ + S ++L L K DD +RD Sbjct 251 ETLDWANALTVLGAREINPSILS---STLTCLIKNEDDLRIVRD 291 >gi|86137531|ref|ZP_01056108.1| hypothetical protein MED193_06714 [Roseobacter sp. MED193] gi|85825866|gb|EAQ46064.1| hypothetical protein MED193_06714 [Roseobacter sp. MED193] Length=302 Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 143/284 (51%), Positives = 184/284 (65%), Gaps = 7/284 (2%) Query 5 SPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLI 64 S D V + EQ Y+ A+ ++L++ LGRPL LEGE GVGKT AK LA LI Sbjct 6 SIDHVQQMLSEQGYVCGRPLATIVFLSLKLGRPLFLEGEAGVGKTEIAKALAAAFGRRLI 65 Query 65 RLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCVR 124 RLQCYEGL A+ A+Y+WN+ Q+++IR AEA G + +L+++ +LV+RP+L +R Sbjct 66 RLQCYEGLDASSAVYEWNFAAQMVAIRTAEAAGGADRATLQTELFSDEFLVERPLLEAMR 125 Query 125 HRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDL 184 PPVLLIDE+DR D+ FEA LLE L + VT+PELGT A PPI VLTSNR+R++ Sbjct 126 PDENGPPVLLIDELDRTDEPFEAFLLEALSDFQVTIPELGTIKAPEPPIVVLTSNRTREV 185 Query 185 HDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVAE 244 HDAL+RRCLYHW++YP DR I+R P A+ L FV T R DL K PGVAE Sbjct 186 HDALKRRCLYHWVEYPDFDREVEILRSRAPDASEQLSREVVAFVQTLRTEDLFKKPGVAE 245 Query 245 TIDWVAALVALGVADLTAADSSPALA--SLGALAKTPDDRTQIR 286 TIDW L+AL V DL SPA+ +LGA+ K DD Q++ Sbjct 246 TIDWANCLLALDVIDL-----SPAVIADTLGAILKYQDDINQLQ 284 >gi|315427099|dbj|BAJ48715.1| ATPase [Candidatus Caldiarchaeum subterraneum] gi|343485764|dbj|BAJ51418.1| ATPase [Candidatus Caldiarchaeum subterraneum] Length=289 Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 132/284 (47%), Positives = 194/284 (69%), Gaps = 6/284 (2%) Query 5 SPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLI 64 +P+ +++ +++ Y+ D A A+YLA+ L +PLL+EGEPG GKT AK LA +L+T LI Sbjct 7 TPEILVKEMEKELYVADEPLALAVYLALKLEKPLLIEGEPGCGKTEVAKVLARLLNTELI 66 Query 65 RLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCVR 124 RLQCYEG+TA++ALY+W+Y RQL++IRL E + K + +I+E ++++E +L+ RP+L + Sbjct 67 RLQCYEGITASQALYEWDYPRQLINIRLLEDK-KSVDEITE-EIFSEKFLLKRPLLAALL 124 Query 125 HRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDL 184 + GP PPVLLIDEIDR+D+EFE LLEFL E VT+PELGT A+ P+ ++TSNR+R++ Sbjct 125 YEGPNPPVLLIDEIDRSDEEFEGFLLEFLAEFQVTIPELGTIKAKKKPVVIITSNRTREV 184 Query 185 HDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDL-DLDKPPGVA 243 D LRRRCLY ++ YP P++ I+ VP + L FV R + +L K PG++ Sbjct 185 GDGLRRRCLYLYVTYPSPEKEMKILSLKVPQLSPKLAAEVVNFVQKLRQIGELAKKPGIS 244 Query 244 ETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRD 287 ET+DW AL LG ++ + S ++L L K DD +RD Sbjct 245 ETLDWANALTVLGAREINPSILS---STLTCLIKNEDDLRIVRD 285 >gi|258655388|ref|YP_003204544.1| ATPase [Nakamurella multipartita DSM 44233] gi|258558613|gb|ACV81555.1| ATPase associated with various cellular activities AAA_5 [Nakamurella multipartita DSM 44233] Length=298 Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 149/266 (57%), Positives = 184/266 (70%), Gaps = 6/266 (2%) Query 17 NYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLIRLQCYEGLTANE 76 YL D G A+A++ A LG+PLLLEGE GVGKT+AA LA LDT LIR+QCYEG+ E Sbjct 25 GYLTDDGLATALFCAARLGQPLLLEGEAGVGKTSAALALATALDTQLIRMQCYEGIDIAE 84 Query 77 ALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCVRHRGPTPPVLLID 136 A+Y+WNY RQLL+IR+AEA + +I+ ADL+ +L+ RP+L+ + H GP P VLLID Sbjct 85 AVYEWNYPRQLLAIRVAEAERQ---EIATADLFDPEFLIHRPLLQALTHPGPRPAVLLID 141 Query 137 EIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDLHDALRRRCLYHW 196 EIDRAD+ FEA LLE L E +VTVPELGT A PPI +LTSNR+RD+HDAL+RRCLYHW Sbjct 142 EIDRADEHFEAYLLEMLAERSVTVPELGTLRATVPPICILTSNRTRDVHDALKRRCLYHW 201 Query 197 IDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVAETIDWVAALVALG 256 I++P R AIVR VPG L V R LDL KPPG AE IDW+ AL LG Sbjct 202 IEHPEVARVVAIVRSRVPGVGEALATAVAAAVAQLRTLDLQKPPGTAEVIDWLRALRVLG 261 Query 257 VADLTAADSSPALASLGALAKTPDDR 282 DL D + A+LG++ K +D+ Sbjct 262 -RDLL--DEATLAATLGSVLKYKEDQ 284 >gi|328544630|ref|YP_004304739.1| ATPase, AAA family [Polymorphum gilvum SL003B-26A1] gi|326414372|gb|ADZ71435.1| ATPase, AAA family [Polymorphum gilvum SL003B-26A1] Length=293 Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 145/280 (52%), Positives = 184/280 (66%), Gaps = 4/280 (1%) Query 6 PDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLIR 65 +++ + E Y+ D G A+A+ L LGRPLLLEGE GVGKT AK LA + DT LIR Sbjct 5 KNELAKALAETGYVADEGLATALLLMELLGRPLLLEGEAGVGKTEVAKALAALHDTDLIR 64 Query 66 LQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCVRH 125 LQCYEGL ++ALY+WNYQRQLL+I+ E G+ I +A L++E YL++RP+L +R Sbjct 65 LQCYEGLDRSDALYEWNYQRQLLAIKAHEGSGEDAQSIEDA-LFSEKYLLERPLLAAIRQ 123 Query 126 RGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDLH 185 PPVLLIDE+DRAD+EFEA LLE L + V++PELGT A P VLTSN +R+L Sbjct 124 --DKPPVLLIDEVDRADEEFEAFLLELLSDYQVSIPELGTVTATSIPKVVLTSNGTRELS 181 Query 186 DALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVAET 245 DALRRRCLYH++DYP R A I+R VPG A L + + R DL K PGVAET Sbjct 182 DALRRRCLYHYVDYPDVGREAQILRTRVPGIDAVLALQIAELMARLRKEDLAKVPGVAET 241 Query 246 IDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQI 285 IDW AALV LG +L D +L + KT +D+ +I Sbjct 242 IDWAAALVGLGGRNLH-EDRELVFDTLACVLKTREDQARI 280 >gi|288961755|ref|YP_003452065.1| ATPase associated with various cellular activities [Azospirillum sp. B510] gi|288914035|dbj|BAI75521.1| ATPase associated with various cellular activities [Azospirillum sp. B510] Length=307 Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 143/283 (51%), Positives = 180/283 (64%), Gaps = 3/283 (1%) Query 4 ASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTL 63 AS DD + NY+ D A+A++LA+ L RPL LEGE GVGKT AK L+ L L Sbjct 7 ASVDDTLALLTRGNYVADRSLATALFLALKLRRPLFLEGEAGVGKTEIAKVLSATLGRKL 66 Query 64 IRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCV 123 +RLQCYEGL A+ A+Y+WNY RQ++ IRLAEA G + ADL++E +LV RP+L+ + Sbjct 67 LRLQCYEGLDASSAVYEWNYARQMMEIRLAEASGGQDRETLAADLFSERFLVKRPLLQAL 126 Query 124 RHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRD 183 PPVLLIDE+DR D+ FEA LLE L + V++PE GT A PPI +LTSNR+R+ Sbjct 127 EPDLAGPPVLLIDELDRTDEPFEAYLLEILSDYQVSIPEFGTIHAPEPPIVILTSNRTRE 186 Query 184 LHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVA 243 +HDAL+RRC YHW+DYP R IV P A A L FV T R LDL K PGVA Sbjct 187 IHDALKRRCFYHWVDYPSAAREREIVAVKAPQADARLAAQVVGFVQTLRGLDLYKAPGVA 246 Query 244 ETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIR 286 ET+DW ALV L +L + S +LG L K DD +I+ Sbjct 247 ETLDWAQALVELNQLEL---EPSIINDTLGTLLKYQDDIARIQ 286 >gi|84515515|ref|ZP_01002877.1| hypothetical protein SKA53_02616 [Loktanella vestfoldensis SKA53] gi|84510798|gb|EAQ07253.1| hypothetical protein SKA53_02616 [Loktanella vestfoldensis SKA53] Length=300 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 141/276 (52%), Positives = 183/276 (67%), Gaps = 7/276 (2%) Query 15 EQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLIRLQCYEGLTA 74 +Q Y+ A+ ++LA+ LGRPL LEGE G GKT AK LA L LIRLQCYEGL A Sbjct 15 DQGYICGRPLATVVFLALRLGRPLFLEGEAGTGKTEIAKALAAALGRRLIRLQCYEGLDA 74 Query 75 NEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCVRHRGPTPPVLL 134 + A+Y+WN+ Q+++IR AEA G +++L+TE YL++RP+L+ +R + P+LL Sbjct 75 SSAVYEWNFAEQMIAIRTAEATGGADRSTLKSELFTEDYLIERPLLQAMRPQPGGAPILL 134 Query 135 IDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDLHDALRRRCLY 194 IDE+DR D FEA LLE L + VT+PELGT A PPI +LTSNR+R++HDAL+RRCLY Sbjct 135 IDELDRTDAPFEAFLLEALSDFQVTIPELGTIKAAEPPIVILTSNRTREVHDALKRRCLY 194 Query 195 HWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVAETIDWVAALVA 254 HW+DYP DR AI+ P A+A L FV RD DL K PGVAETIDW L+A Sbjct 195 HWVDYPDFDREIAILHARAPEASAALSAEVVAFVQRLRDEDLYKKPGVAETIDWAKCLLA 254 Query 255 LGVADLTAADSSPALAS--LGALAKTPDDRTQIRDA 288 L V +L SP + S LGAL K DD ++++A Sbjct 255 LDVVNL-----SPEVISDTLGALLKYQDDIQKLQNA 285 >gi|159044899|ref|YP_001533693.1| hypothetical protein Dshi_2356 [Dinoroseobacter shibae DFL 12] gi|157912659|gb|ABV94092.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12] Length=303 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 145/286 (51%), Positives = 186/286 (66%), Gaps = 7/286 (2%) Query 2 TFASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDT 61 TF S D V QNY+ A+ ++LA TLGRP+ LEGE GVGKT AK +A L Sbjct 4 TFTSIDHVQEVLSAQNYVCGRPLATVVFLAATLGRPIFLEGEAGVGKTEIAKAMAAALGK 63 Query 62 TLIRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILR 121 LIRLQCYEGL A+ A+Y+WN+ Q+++IR AEA G +A+L+++ YL++RP+L Sbjct 64 RLIRLQCYEGLDASSAVYEWNFPAQMVAIRTAEASGGADRQALQAELFSDDYLIERPLLE 123 Query 122 CVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRS 181 +R + PVLLIDEIDR D+ FEA LLE L + VT+PELGT +A PP+ VLTSNR+ Sbjct 124 AMRPQEGGAPVLLIDEIDRTDEPFEAFLLEALSDYQVTIPELGTIVAAEPPLVVLTSNRT 183 Query 182 RDLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPG 241 R++HDAL+RRCLYHW+DYP DR AI++ P A A L FV R DL K PG Sbjct 184 REVHDALKRRCLYHWVDYPTFDREIAILQARAPEAAAALSREVVAFVQRLRTEDLFKKPG 243 Query 242 VAETIDWVAALVALGVADLTAADSSPALA--SLGALAKTPDDRTQI 285 VAETIDW L+AL V +L SP + +LGA+ K DD +I Sbjct 244 VAETIDWAKCLLALDVMEL-----SPEVIADTLGAILKYQDDIQKI 284 >gi|27380774|ref|NP_772303.1| hypothetical protein bll5663 [Bradyrhizobium japonicum USDA 110] gi|2924373|emb|CAA12065.1| hypothetical protein [Bradyrhizobium japonicum USDA 110] gi|27353939|dbj|BAC50928.1| bll5663 [Bradyrhizobium japonicum USDA 110] Length=302 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 136/285 (48%), Positives = 183/285 (65%), Gaps = 7/285 (2%) Query 4 ASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTL 63 AS D ++ + YL + A+ YL++ +GRPL LEGE GVGKT AK L+ L L Sbjct 8 ASVDAMLELLTSRGYLAERSLATVTYLSLRMGRPLFLEGEAGVGKTEIAKVLSAALGRKL 67 Query 64 IRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCV 123 IRLQCYEGL + A+Y+WN Q+++IR+AEA G D +D++ + Y++ RP+L+ + Sbjct 68 IRLQCYEGLDVSSAVYEWNSAAQMIAIRMAEAAGDTDRDQLSSDIFADRYMIKRPLLQAL 127 Query 124 RHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRD 183 PPVLLIDE+DRAD+ FEA LLE L + VT+PE GT A PPI ++TSNR+R+ Sbjct 128 EPDVAGPPVLLIDELDRADEAFEAYLLEILSDFQVTIPEFGTVKAPYPPIVIITSNRTRE 187 Query 184 LHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVA 243 +HDAL+RRCLYHW+DYP +R AIV+ VPG + L + +FV R+ D K PGVA Sbjct 188 IHDALKRRCLYHWVDYPAAERELAIVKTRVPGISTKLSQQVVRFVQALRNQDFYKSPGVA 247 Query 244 ETIDWVAALVALGVADLTAADSSPALA--SLGALAKTPDDRTQIR 286 ETIDW AL L LT P + +LGAL K DD T+++ Sbjct 248 ETIDWATALSELDARSLT-----PQVVGDTLGALLKYQDDITRMQ 287 >gi|92118118|ref|YP_577847.1| ATPase [Nitrobacter hamburgensis X14] gi|91801012|gb|ABE63387.1| ATPase associated with various cellular activities, AAA_5 [Nitrobacter hamburgensis X14] Length=303 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 135/275 (50%), Positives = 179/275 (66%), Gaps = 7/275 (2%) Query 15 EQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLIRLQCYEGLTA 74 + YL + A+ ++L++ +GRPL LEGE GVGKT AK L+ L LIRLQCYEGL Sbjct 20 KHGYLAERSLATVVFLSLRMGRPLFLEGEAGVGKTEIAKVLSAALGRKLIRLQCYEGLDI 79 Query 75 NEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCVRHRGPTPPVLL 134 A+Y+WN Q+++IRLAEA G + +D++ E YL+ RP+L+ + PPVLL Sbjct 80 ASAVYEWNSAAQMIAIRLAEAAGDTDREQLSSDIFAEKYLIKRPLLQALEPDVAGPPVLL 139 Query 135 IDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDLHDALRRRCLY 194 IDEIDRAD+ FEA LLE L + VT+PELGT A PPI ++TSNR+R++HDAL+RRCLY Sbjct 140 IDEIDRADEAFEAYLLEILSDFQVTIPELGTVKAPAPPIVIVTSNRTREIHDALKRRCLY 199 Query 195 HWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVAETIDWVAALVA 254 HW+DYP +R AIV+ +PG +A L + FV R+ D K PGVAETIDW AL Sbjct 200 HWVDYPSAERELAIVKSRIPGISAKLSQQVVGFVQALRNRDFYKNPGVAETIDWATALTE 259 Query 255 LGVADLTAADSSPALA--SLGALAKTPDDRTQIRD 287 L LT P + ++GAL K DD +++D Sbjct 260 LDARSLT-----PQVVDDTIGALLKYQDDIGRMQD 289 >gi|163759558|ref|ZP_02166643.1| hypothetical protein HPDFL43_09402 [Hoeflea phototrophica DFL-43] gi|162283155|gb|EDQ33441.1| hypothetical protein HPDFL43_09402 [Hoeflea phototrophica DFL-43] Length=308 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 137/282 (49%), Positives = 177/282 (63%), Gaps = 3/282 (1%) Query 4 ASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTL 63 AS D+ + + +Y+ A+ ++L++ + RPL LEGE GVGKT AK LA LD L Sbjct 10 ASIDETLEMLSDGDYVAGRALATVLFLSLKMQRPLFLEGEAGVGKTEIAKVLAKALDRPL 69 Query 64 IRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCV 123 IRLQCYEGL + A+Y+WNY Q+L IRLAEA G+ E +++E +L+ RP+L+ + Sbjct 70 IRLQCYEGLDVSSAVYEWNYPAQMLEIRLAEATGEDDRSAIERSIFSEKHLIRRPVLQAL 129 Query 124 RHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRD 183 G PV LIDE+DR D+ FEA LLE L + VT+PELGT AE PPI ++T+NR+R+ Sbjct 130 EAPGGRAPVFLIDELDRTDEAFEAFLLEILSDYQVTIPELGTIKAEEPPIVIITTNRTRE 189 Query 184 LHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVA 243 +HDAL+RRCLYHW+DYP D IVRR VPG L +V R +DL K PGVA Sbjct 190 IHDALKRRCLYHWVDYPAADVELEIVRRKVPGCHDELSRQVVAYVQKLRQMDLFKSPGVA 249 Query 244 ETIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQI 285 ETIDW AL L D A D +LG L K DD +I Sbjct 250 ETIDWATALTEL---DRLALDPETVSDTLGTLLKYQDDIARI 288 >gi|154253399|ref|YP_001414223.1| ATPase [Parvibaculum lavamentivorans DS-1] gi|154157349|gb|ABS64566.1| ATPase associated with various cellular activities AAA_5 [Parvibaculum lavamentivorans DS-1] Length=303 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 141/280 (51%), Positives = 182/280 (65%), Gaps = 7/280 (2%) Query 4 ASPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTL 63 +S D+ + NY+ D A+ I+LA+ +GRPLLLEGE GVGKT AK LA L L Sbjct 5 SSIDETVDLLARGNYVADRSLATVIFLALKMGRPLLLEGEAGVGKTEIAKVLADALGRRL 64 Query 64 IRLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISE--ADLYTEAYLVDRPILR 121 IRLQCYEGL A+Y+WNYQ Q++ IRLAEA +G+ D +E D+++E +L+ RPIL+ Sbjct 65 IRLQCYEGLDTGAAVYEWNYQAQMIEIRLAEA--EGVEDRTELGKDVFSERFLIRRPILQ 122 Query 122 CVRHRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRS 181 + PPVLLIDE+DR D+ FEA LLE L + V+VPE+GT A PPI ++TSNR+ Sbjct 123 ALEPAIEGPPVLLIDELDRTDEPFEAYLLEVLSDFQVSVPEIGTIKAGHPPIVIVTSNRT 182 Query 182 RDLHDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPG 241 R++HDAL+RRCLYHW+DYP +R AI++ P L + FV R +DL K PG Sbjct 183 REIHDALKRRCLYHWVDYPDAERELAILKLKAPATPEKLSRDIVAFVQKLRAMDLYKNPG 242 Query 242 VAETIDWVAALVALGVADLTAADSSPALASLGALAKTPDD 281 +AETIDW AL AL D A D +LGAL K DD Sbjct 243 IAETIDWAQALTAL---DAVALDRQSVNDTLGALLKYQDD 279 >gi|15965505|ref|NP_385858.1| hypothetical protein SMc00515 [Sinorhizobium meliloti 1021] gi|334316387|ref|YP_004549006.1| ATPase [Sinorhizobium meliloti AK83] gi|15074686|emb|CAC46331.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021] gi|333811747|gb|AEG04416.1| ATPase associated with various cellular activities AAA_5 [Sinorhizobium meliloti BL225C] gi|334095381|gb|AEG53392.1| ATPase associated with various cellular activities AAA_5 [Sinorhizobium meliloti AK83] gi|336032989|gb|AEH78921.1| hypothetical protein SM11_chr1646 [Sinorhizobium meliloti SM11] Length=309 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 139/284 (49%), Positives = 178/284 (63%), Gaps = 3/284 (1%) Query 5 SPDDVIRRFDEQNYLLDTGTASAIYLAVTLGRPLLLEGEPGVGKTTAAKTLAVVLDTTLI 64 S D+ + Q+YL T A+ ++LA+ + RPL LEGE GVGKT AK LA LD LI Sbjct 12 SIDETRAMLEAQDYLAGTALATVLFLALRMKRPLFLEGEAGVGKTEIAKVLARALDRPLI 71 Query 65 RLQCYEGLTANEALYDWNYQRQLLSIRLAEARGKGISDISEADLYTEAYLVDRPILRCVR 124 RLQCYEGL A+Y+WNY Q+L IRL+EA G E+D+++E +L+ RP+L+ + Sbjct 72 RLQCYEGLDVASAVYEWNYPAQMLEIRLSEAAGTVDRQRVESDIFSERFLIRRPVLQAIS 131 Query 125 HRGPTPPVLLIDEIDRADDEFEALLLEFLGESAVTVPELGTFLAECPPIAVLTSNRSRDL 184 PV LIDE+DR D+ FEA LLE L + VT+PELGT A+ PPI ++T+NR+R++ Sbjct 132 TTAGRAPVFLIDELDRTDEAFEAFLLEVLSDFQVTIPELGTIKADEPPIVIITTNRTREI 191 Query 185 HDALRRRCLYHWIDYPGPDRAAAIVRRTVPGATAPLIENATQFVCTARDLDLDKPPGVAE 244 HDAL+RRCLYHW+DYP + I+RR VPG A L +V R LDL K PGVAE Sbjct 192 HDALKRRCLYHWVDYPKAAQELEIIRRKVPGCNAALSREIVAYVQRLRALDLFKNPGVAE 251 Query 245 TIDWVAALVALGVADLTAADSSPALASLGALAKTPDDRTQIRDA 288 TIDW AL L D A D +LG L K DD +I A Sbjct 252 TIDWATALTEL---DALALDPETVADTLGTLLKYQDDIARIEGA 292 Lambda K H 0.320 0.136 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 498909360640 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40