BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0375c Length=286 Score E Sequences producing significant alignments: (Bits) Value gi|15839761|ref|NP_334798.1| carbon monoxide dehydrogenase, medi... 564 5e-159 gi|15607516|ref|NP_214889.1| carbon monoxyde dehydrogenase mediu... 564 7e-159 gi|289572960|ref|ZP_06453187.1| carbon monoxide dehydrogenase su... 561 6e-158 gi|289748860|ref|ZP_06508238.1| carbon monoxide dehydrogenase su... 556 2e-156 gi|340625405|ref|YP_004743857.1| putative carbon monoxyde dehydr... 556 2e-156 gi|240172155|ref|ZP_04750814.1| carbon monoxyde dehydrogenase me... 486 1e-135 gi|296167824|ref|ZP_06850009.1| carbon monoxide dehydrogenase (m... 475 4e-132 gi|118473300|ref|YP_885150.1| carbon monoxide dehydrogenase medi... 453 1e-125 gi|183980680|ref|YP_001848971.1| carbon monoxyde dehydrogenase (... 439 2e-121 gi|126433090|ref|YP_001068781.1| carbon monoxide dehydrogenase, ... 404 9e-111 gi|108797469|ref|YP_637666.1| carbon monoxide dehydrogenase, med... 402 3e-110 gi|289760486|ref|ZP_06519864.1| hypothetical carbon monoxide deh... 380 1e-103 gi|281191483|gb|ADA57152.1| carbon monoxide dehydrogenase medium... 377 1e-102 gi|111022197|ref|YP_705169.1| dehydrogenase [Rhodococcus jostii ... 371 9e-101 gi|226364687|ref|YP_002782469.1| carbon monoxide dehydrogenase m... 370 1e-100 gi|325675989|ref|ZP_08155672.1| carbon monoxide dehydrogenase [R... 356 3e-96 gi|312140401|ref|YP_004007737.1| carbon monoxide dehydrogenase m... 355 3e-96 gi|119714489|ref|YP_921454.1| molybdopterin dehydrogenase [Nocar... 349 3e-94 gi|302866404|ref|YP_003835041.1| FAD-binding molybdopterin dehyd... 341 1e-91 gi|315502815|ref|YP_004081702.1| FAD-binding molybdopterin dehyd... 340 2e-91 gi|116670588|ref|YP_831521.1| molybdopterin dehydrogenase, FAD-b... 285 6e-75 gi|284044479|ref|YP_003394819.1| molybdopterin dehydrogenase FAD... 269 4e-70 gi|331696473|ref|YP_004332712.1| carbon-monoxide dehydrogenase [... 253 2e-65 gi|258655383|ref|YP_003204539.1| FAD-binding molybdopterin dehyd... 221 1e-55 gi|209515295|ref|ZP_03264162.1| molybdopterin dehydrogenase FAD-... 201 1e-49 gi|269928693|ref|YP_003321014.1| molybdopterin dehydrogenase FAD... 196 4e-48 gi|119714495|ref|YP_921460.1| molybdopterin dehydrogenase [Nocar... 196 4e-48 gi|325969073|ref|YP_004245265.1| molybdopterin dehydrogenase, FA... 193 2e-47 gi|307594838|ref|YP_003901155.1| molybdopterin dehydrogenase FAD... 193 3e-47 gi|296159235|ref|ZP_06842061.1| molybdopterin dehydrogenase FAD-... 192 4e-47 gi|10835788|pdb|1FFV|C Chain C, Carbon Monoxide Dehydrogenase Fr... 191 1e-46 gi|91783670|ref|YP_558876.1| carbon monoxide dehydrogenase, medi... 190 2e-46 gi|21903402|sp|P19914.2|DCMM_HYDPS RecName: Full=Carbon monoxide... 189 4e-46 gi|114320716|ref|YP_742399.1| carbon monoxide dehydrogenase, med... 189 4e-46 gi|10835782|pdb|1FFU|C Chain C, Carbon Monoxide Dehydrogenase Fr... 189 5e-46 gi|313902887|ref|ZP_07836283.1| carbon monoxide dehydrogenase, m... 189 5e-46 gi|229582557|ref|YP_002840956.1| molybdopterin dehydrogenase FAD... 188 8e-46 gi|108802967|ref|YP_642904.1| molybdopterin dehydrogenase protei... 188 1e-45 gi|329903331|ref|ZP_08273424.1| Carbon monoxide dehydrogenase me... 187 2e-45 gi|229578654|ref|YP_002837052.1| molybdopterin dehydrogenase FAD... 186 3e-45 gi|332667195|ref|YP_004449983.1| carbon-monoxide dehydrogenase (... 184 1e-44 gi|298244377|ref|ZP_06968183.1| molybdopterin dehydrogenase FAD-... 182 4e-44 gi|221635972|ref|YP_002523848.1| nicotine dehydrogenase chain A ... 182 4e-44 gi|91780099|ref|YP_555306.1| carbon monoxide dehydrogenase, medi... 182 4e-44 gi|298242130|ref|ZP_06965937.1| molybdopterin dehydrogenase FAD-... 181 1e-43 gi|284175382|ref|ZP_06389351.1| molybdopterin dehydrogenase FAD-... 181 1e-43 gi|317122329|ref|YP_004102332.1| carbon monoxide dehydrogenase, ... 181 1e-43 gi|268318303|ref|YP_003292022.1| molybdopterin dehydrogenase FAD... 180 2e-43 gi|315427100|dbj|BAJ48716.1| molybdopterin dehydrogenase FAD-bin... 180 2e-43 gi|14601920|ref|NP_148465.1| aldehyde dehydrogenase, middle subu... 178 7e-43 >gi|15839761|ref|NP_334798.1| carbon monoxide dehydrogenase, medium subunit, putative [Mycobacterium tuberculosis CDC1551] gi|148821571|ref|YP_001286325.1| carbon monoxyde dehydrogenase medium subunit [Mycobacterium tuberculosis F11] gi|167968513|ref|ZP_02550790.1| hypothetical carbon monoxyde dehydrogenase medium subunit [Mycobacterium tuberculosis H37Ra] 38 more sequence titles Length=300 Score = 564 bits (1454), Expect = 5e-159, Method: Compositional matrix adjust. Identities = 286/286 (100%), Positives = 286/286 (100%), Gaps = 0/286 (0%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN Sbjct 15 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 74 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV Sbjct 75 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 134 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR Sbjct 135 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 194 Query 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 240 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR Sbjct 195 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 254 Query 241 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVLGAPAAPEA 286 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVLGAPAAPEA Sbjct 255 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVLGAPAAPEA 300 >gi|15607516|ref|NP_214889.1| carbon monoxyde dehydrogenase medium subunit [Mycobacterium tuberculosis H37Rv] gi|31791552|ref|NP_854045.1| carbon monoxyde dehydrogenase medium subunit [Mycobacterium bovis AF2122/97] gi|121636288|ref|YP_976511.1| putative carbon monoxyde dehydrogenase (medium chain) [Mycobacterium bovis BCG str. Pasteur 1173P2] 27 more sequence titles Length=286 Score = 564 bits (1453), Expect = 7e-159, Method: Compositional matrix adjust. Identities = 285/286 (99%), Positives = 286/286 (100%), Gaps = 0/286 (0%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 +DHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN Sbjct 1 MDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV Sbjct 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR Sbjct 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 Query 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 240 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR Sbjct 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 240 Query 241 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVLGAPAAPEA 286 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVLGAPAAPEA Sbjct 241 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVLGAPAAPEA 286 >gi|289572960|ref|ZP_06453187.1| carbon monoxide dehydrogenase subunit medium [Mycobacterium tuberculosis K85] gi|339630445|ref|YP_004722087.1| carbon monoxyde dehydrogenase medium subunit [Mycobacterium africanum GM041182] gi|289537391|gb|EFD41969.1| carbon monoxide dehydrogenase subunit medium [Mycobacterium tuberculosis K85] gi|339329801|emb|CCC25449.1| putative carbon monoxyde dehydrogenase (medium chain) [Mycobacterium africanum GM041182] Length=286 Score = 561 bits (1445), Expect = 6e-158, Method: Compositional matrix adjust. Identities = 284/286 (99%), Positives = 285/286 (99%), Gaps = 0/286 (0%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 +DHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN Sbjct 1 MDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV Sbjct 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 CTVLDAVCLAKGPSGEREIAI DFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR Sbjct 121 CTVLDAVCLAKGPSGEREIAIGDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 Query 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 240 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR Sbjct 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 240 Query 241 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVLGAPAAPEA 286 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVLGAPAAPEA Sbjct 241 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVLGAPAAPEA 286 >gi|289748860|ref|ZP_06508238.1| carbon monoxide dehydrogenase subunit medium [Mycobacterium tuberculosis T92] gi|289689447|gb|EFD56876.1| carbon monoxide dehydrogenase subunit medium [Mycobacterium tuberculosis T92] Length=286 Score = 556 bits (1432), Expect = 2e-156, Method: Compositional matrix adjust. Identities = 282/286 (99%), Positives = 284/286 (99%), Gaps = 0/286 (0%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 +DHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN Sbjct 1 MDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV Sbjct 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR Sbjct 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 Query 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 240 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR Sbjct 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 240 Query 241 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVLGAPAAPEA 286 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAG VLGAPA+ EA Sbjct 241 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGGVLGAPASLEA 286 >gi|340625405|ref|YP_004743857.1| putative carbon monoxyde dehydrogenase (medium chain) [Mycobacterium canettii CIPT 140010059] gi|340003595|emb|CCC42716.1| putative carbon monoxyde dehydrogenase (medium chain) [Mycobacterium canettii CIPT 140010059] Length=286 Score = 556 bits (1432), Expect = 2e-156, Method: Compositional matrix adjust. Identities = 282/286 (99%), Positives = 283/286 (99%), Gaps = 0/286 (0%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 +DHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN Sbjct 1 MDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV Sbjct 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR Sbjct 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 Query 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 240 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSA LVGQPATEEVFAEAGRR Sbjct 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSASLVGQPATEEVFAEAGRR 240 Query 241 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVLGAPAAPEA 286 AAQACTPVTDVRGTAEYKRHLA ELTVRTLRTAAGRVL APAAPEA Sbjct 241 AAQACTPVTDVRGTAEYKRHLACELTVRTLRTAAGRVLRAPAAPEA 286 >gi|240172155|ref|ZP_04750814.1| carbon monoxyde dehydrogenase medium subunit [Mycobacterium kansasii ATCC 12478] Length=296 Score = 486 bits (1251), Expect = 1e-135, Method: Compositional matrix adjust. Identities = 241/281 (86%), Positives = 258/281 (92%), Gaps = 4/281 (1%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDL PELGYV I +P Sbjct 15 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLVPELGYV----ITDPT 70 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 LVR+GAMTRHREIL+SD LAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV Sbjct 71 LVRIGAMTRHREILESDTLAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 130 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 CTVLDAVCLA+GPSGEREIAIDDF+VGPYETA+AHNE+L+EVRIPLRHNTSSAYAKVERR Sbjct 131 CTVLDAVCLARGPSGEREIAIDDFMVGPYETAVAHNELLVEVRIPLRHNTSSAYAKVERR 190 Query 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 240 VGDWA+TAAGA++TLDG TI A RVGLTAVNPD ALAELS L+G+PATEE FAEAGR+ Sbjct 191 VGDWAVTAAGASITLDGDTIAAVRVGLTAVNPDRTALAELSQALLGRPATEETFAEAGRQ 250 Query 241 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVLGAP 281 A+QAC PVTD+RGTAEYKRHLA ELT+RTLRTA RV P Sbjct 251 ASQACDPVTDIRGTAEYKRHLASELTIRTLRTATERVRNIP 291 >gi|296167824|ref|ZP_06850009.1| carbon monoxide dehydrogenase (medium chain), CoxM [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897022|gb|EFG76643.1| carbon monoxide dehydrogenase (medium chain), CoxM [Mycobacterium parascrofulaceum ATCC BAA-614] Length=293 Score = 475 bits (1222), Expect = 4e-132, Method: Compositional matrix adjust. Identities = 240/277 (87%), Positives = 253/277 (92%), Gaps = 4/277 (1%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 VDHAIGLLDRLGEGAR+VAGGHSLLPMMKLRIANPEYLVDINDLA ELGYV I +P Sbjct 15 VDHAIGLLDRLGEGARIVAGGHSLLPMMKLRIANPEYLVDINDLALELGYV----ITDPT 70 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 LVR+GAMTRHREIL+SD LAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV Sbjct 71 LVRIGAMTRHREILESDTLAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 130 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 CTVLDAVCLA+GPSGEREIAIDDFL GPYET LA NE+LIEVRIP+RHN+SSAYAKVERR Sbjct 131 CTVLDAVCLARGPSGEREIAIDDFLAGPYETTLAPNEMLIEVRIPVRHNSSSAYAKVERR 190 Query 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 240 VGDWA+TAAGA+VTLDG I AARV LTAVNPD ALAELSA LVG+PATEE AEAGRR Sbjct 191 VGDWAVTAAGASVTLDGDQIAAARVDLTAVNPDRDALAELSAALVGRPATEETLAEAGRR 250 Query 241 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRV 277 AAQAC PVTDVRG+AEYKRHLA ELT+RTLRTA RV Sbjct 251 AAQACEPVTDVRGSAEYKRHLASELTIRTLRTATQRV 287 >gi|118473300|ref|YP_885150.1| carbon monoxide dehydrogenase medium chain [Mycobacterium smegmatis str. MC2 155] gi|118174587|gb|ABK75483.1| carbon monoxide dehydrogenase medium chain [Mycobacterium smegmatis str. MC2 155] Length=296 Score = 453 bits (1165), Expect = 1e-125, Method: Compositional matrix adjust. Identities = 228/285 (80%), Positives = 251/285 (89%), Gaps = 5/285 (1%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 VDHA+GLLDRLGE AR+VAGGHSLLPMMKLRIANPEYLVDINDLA ELGYV I +P Sbjct 15 VDHAVGLLDRLGEDARIVAGGHSLLPMMKLRIANPEYLVDINDLAVELGYV----ITDPT 70 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 LVR+GAM RHR++L+SD LAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDL+TV Sbjct 71 LVRIGAMARHRQVLESDPLAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLTTV 130 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 CT+L AVCLA+GP GEREI IDDFLVGPYETALAHNE+L+EVRIP+RH TSSAYAKVERR Sbjct 131 CTILGAVCLARGPGGEREIGIDDFLVGPYETALAHNEMLVEVRIPVRHRTSSAYAKVERR 190 Query 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 240 VGDWA+TAAGA VTLDG +I+AARVGLTAVNPDP AL L+ L+G+PATEE FA AG Sbjct 191 VGDWAVTAAGAQVTLDGDSIVAARVGLTAVNPDPDALRALADDLIGKPATEETFAAAGEL 250 Query 241 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVLGAPAAPE 285 A QAC PVTD RG+A+YKRHLA ELT+RT+RTA RV AP APE Sbjct 251 AVQACEPVTDTRGSADYKRHLARELTIRTMRTAVERVRTAP-APE 294 >gi|183980680|ref|YP_001848971.1| carbon monoxyde dehydrogenase (medium chain), CoxM [Mycobacterium marinum M] gi|183174006|gb|ACC39116.1| carbon monoxyde dehydrogenase (medium chain), CoxM [Mycobacterium marinum M] Length=296 Score = 439 bits (1129), Expect = 2e-121, Method: Compositional matrix adjust. Identities = 236/282 (84%), Positives = 256/282 (91%), Gaps = 4/282 (1%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 VDHAIGLLDRLGEGAR+VAGGHSLLPMMKLRIANPEYLVDINDLAPELGYV I +P Sbjct 15 VDHAIGLLDRLGEGARLVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYV----ITDPT 70 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 LVR+GAM RHREIL+S+ALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV Sbjct 71 LVRIGAMARHREILESEALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 130 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 CTVLDAVCLA+G SGEREIAID+F GPYET LA +E+L+EVRIP+RHNTSSAYAKVERR Sbjct 131 CTVLDAVCLARGSSGEREIAIDEFQAGPYETTLAPSEMLVEVRIPVRHNTSSAYAKVERR 190 Query 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 240 VGDWA+TAAGAAVTL+ TI AARVGLTAVNPDP ALAEL+A LVG+PA E+ FAEAGRR Sbjct 191 VGDWAVTAAGAAVTLNNDTITAARVGLTAVNPDPAALAELAAALVGRPANEDTFAEAGRR 250 Query 241 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVLGAPA 282 A QAC PVTD+RGTA+YKRHLA ELT+RTLR+A GRV PA Sbjct 251 AGQACEPVTDIRGTADYKRHLAAELTIRTLRSAVGRVRNQPA 292 >gi|126433090|ref|YP_001068781.1| carbon monoxide dehydrogenase, medium subunit [Mycobacterium sp. JLS] gi|126232890|gb|ABN96290.1| carbon monoxide dehydrogenase, medium subunit [Mycobacterium sp. JLS] Length=291 Score = 404 bits (1038), Expect = 9e-111, Method: Compositional matrix adjust. Identities = 208/277 (76%), Positives = 237/277 (86%), Gaps = 4/277 (1%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 VDHAIGLLDRLG+GA +VAGGHSLLPMMKLRIANPEYLVDINDL ELGY+ V + Sbjct 15 VDHAIGLLDRLGDGAMIVAGGHSLLPMMKLRIANPEYLVDINDLTRELGYITV----DAR 70 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 VR+GAMTRHR++L+S LA VCPIF DAER+IADPVVRNRGTLGGSLCQADPAEDL+TV Sbjct 71 AVRIGAMTRHRQVLESAELAEVCPIFADAERMIADPVVRNRGTLGGSLCQADPAEDLTTV 130 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 C L AVC+A+GPSG+REI ID+FL GPYET+L+HNE+L+EVRIP+R NTSSAY KVERR Sbjct 131 CQTLGAVCVARGPSGQREIPIDEFLEGPYETSLSHNEILLEVRIPVRPNTSSAYTKVERR 190 Query 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 240 VGDWA+TAAGA VTLDG TI AAR+GLTAVNPD ALA + A LVG+ A E+ FAEAGR+ Sbjct 191 VGDWAVTAAGAMVTLDGDTITAARIGLTAVNPDAAALAAVGAALVGRTADEDAFAEAGRQ 250 Query 241 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRV 277 AA AC P +D+RG+A+YKRHLA ELTVR LRTA RV Sbjct 251 AADACAPDSDMRGSADYKRHLASELTVRNLRTAVRRV 287 >gi|108797469|ref|YP_637666.1| carbon monoxide dehydrogenase, medium subunit [Mycobacterium sp. MCS] gi|119866554|ref|YP_936506.1| carbon monoxide dehydrogenase, medium subunit [Mycobacterium sp. KMS] gi|108767888|gb|ABG06610.1| carbon monoxide dehydrogenase, medium subunit [Mycobacterium sp. MCS] gi|119692643|gb|ABL89716.1| carbon monoxide dehydrogenase, medium subunit [Mycobacterium sp. KMS] Length=291 Score = 402 bits (1034), Expect = 3e-110, Method: Compositional matrix adjust. Identities = 207/277 (75%), Positives = 237/277 (86%), Gaps = 4/277 (1%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 VDHAIGLLDRLG+GA +VAGGHSLLPMMKLRIANPEYLVDINDL ELGY+ V + Sbjct 15 VDHAIGLLDRLGDGAMIVAGGHSLLPMMKLRIANPEYLVDINDLTRELGYITV----DAR 70 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 VR+GAMTRHR++L+S LA VCPIF DAER+IADPVVRNRGTLGGSLCQADPAEDL+TV Sbjct 71 AVRIGAMTRHRQVLESAELAEVCPIFADAERMIADPVVRNRGTLGGSLCQADPAEDLTTV 130 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 C L AVC+A+GPSG+REI ID+FL GPYET+L+HNE+L+EVRIP+R NTSSAY KVERR Sbjct 131 CQTLGAVCVARGPSGQREIPIDEFLEGPYETSLSHNEILLEVRIPVRPNTSSAYTKVERR 190 Query 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 240 VGDWA+TAAGA VTL+G TI AAR+GLTAVNPD ALA + A LVG+ A E+ FAEAGR+ Sbjct 191 VGDWAVTAAGAMVTLEGDTITAARIGLTAVNPDAAALAAVGAALVGRTADEDAFAEAGRQ 250 Query 241 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRV 277 AA AC P +D+RG+A+YKRHLA ELTVR LRTA RV Sbjct 251 AADACAPDSDMRGSADYKRHLASELTVRNLRTAVRRV 287 >gi|289760486|ref|ZP_06519864.1| hypothetical carbon monoxide dehydrogenase medium subunit [Mycobacterium tuberculosis GM 1503] gi|289707992|gb|EFD72008.1| hypothetical carbon monoxide dehydrogenase medium subunit [Mycobacterium tuberculosis GM 1503] Length=221 Score = 380 bits (976), Expect = 1e-103, Method: Compositional matrix adjust. Identities = 188/188 (100%), Positives = 188/188 (100%), Gaps = 0/188 (0%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN Sbjct 15 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 74 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV Sbjct 75 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 134 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR Sbjct 135 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 194 Query 181 VGDWAITA 188 VGDWAITA Sbjct 195 VGDWAITA 202 >gi|281191483|gb|ADA57152.1| carbon monoxide dehydrogenase medium subunit [Mycobacterium sp. DSM 3803] gi|281191493|gb|ADA57162.1| carbon monoxide dehydrogenase medium subunit [Mycobacterium sp. DSM 3803] Length=290 Score = 377 bits (967), Expect = 1e-102, Method: Compositional matrix adjust. Identities = 199/280 (72%), Positives = 231/280 (83%), Gaps = 4/280 (1%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 V HA+ LLDRLG+ A +VAGGHSLLPMMKLRIANPEYLVD+NDL ELGY+ V P Sbjct 15 VAHAVSLLDRLGDSAMMVAGGHSLLPMMKLRIANPEYLVDLNDLVGELGYITV----EPT 70 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 +VRLG+M RHRE L S L AVCPIFRDAE VIADPVVRNRGT+GGSLCQADP+EDL+TV Sbjct 71 VVRLGSMVRHREALQSADLNAVCPIFRDAELVIADPVVRNRGTVGGSLCQADPSEDLTTV 130 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 C VL+A +A+GP+G RE+++ +F VGPYET+L NE+L+EV+IPLR NTSSAYAKVERR Sbjct 131 CEVLNATVVAQGPAGRRELSMAEFHVGPYETSLEPNELLVEVKIPLRANTSSAYAKVERR 190 Query 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 240 VGDWA+ AAG++VTLDG TI AA GLTAVNPD ALA +A +VG+PA+EE FAEAGR Sbjct 191 VGDWAVAAAGSSVTLDGPTIAAAHFGLTAVNPDAEALAAAAAAIVGKPASEETFAEAGRG 250 Query 241 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVLGA 280 AA AC P TD RG+A+YKRHLA ELT+RTLRTA RVL A Sbjct 251 AAAACEPTTDQRGSADYKRHLASELTIRTLRTAVARVLNA 290 >gi|111022197|ref|YP_705169.1| dehydrogenase [Rhodococcus jostii RHA1] gi|110821727|gb|ABG97011.1| dehydrogenase [Rhodococcus jostii RHA1] Length=301 Score = 371 bits (952), Expect = 9e-101, Method: Compositional matrix adjust. Identities = 192/278 (70%), Positives = 229/278 (83%), Gaps = 4/278 (1%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 V+ AI LLDRLG+ AR+VAGGHSLLPMMKLR+ANPEYL+DINDL ELGY+ + Sbjct 15 VEDAIALLDRLGDEARLVAGGHSLLPMMKLRLANPEYLIDINDLEGELGYIT----TERS 70 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 +R+GAMTRHR +L+SD LA P+FRDAE+VIADPVVRNRGT+GGSLCQADPAEDL+TV Sbjct 71 RLRIGAMTRHRRLLESDELAVAFPLFRDAEKVIADPVVRNRGTIGGSLCQADPAEDLTTV 130 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 C+VLDA C+ +GP G REI + +FLVGPYETALAHNE+LIE+ IP+ ++SSAYAKVERR Sbjct 131 CSVLDATCVVRGPGGRREIPMSEFLVGPYETALAHNEMLIEIVIPVHGHSSSAYAKVERR 190 Query 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 240 GDWA+TAAGAAVT++G I A VGLTAVNPDP L++++ L G+P +EE FA+AGR Sbjct 191 TGDWAVTAAGAAVTVEGGEIARAAVGLTAVNPDPSGLSDVADYLTGRPPSEEAFAQAGRM 250 Query 241 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVL 278 AAQAC PV D RGT +YKRHLA ELT+RTLRTA RVL Sbjct 251 AAQACEPVADARGTVDYKRHLASELTIRTLRTAVDRVL 288 >gi|226364687|ref|YP_002782469.1| carbon monoxide dehydrogenase medium subunit [Rhodococcus opacus B4] gi|226243176|dbj|BAH53524.1| carbon monoxide dehydrogenase medium subunit [Rhodococcus opacus B4] Length=301 Score = 370 bits (950), Expect = 1e-100, Method: Compositional matrix adjust. Identities = 194/278 (70%), Positives = 229/278 (83%), Gaps = 4/278 (1%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 VD AI LLDRLG+ AR+VAGGHSLLPMMKLR+ANPEYL+DINDL ELGY+ + Sbjct 15 VDDAIALLDRLGDEARLVAGGHSLLPMMKLRLANPEYLIDINDLEGELGYIT----TERS 70 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 VR+GAMTRHR +L+SD LAA P+FRDAE+VIADPVVRNRGT+GGSLCQADPAEDL+TV Sbjct 71 RVRIGAMTRHRRLLESDELAAAFPLFRDAEKVIADPVVRNRGTIGGSLCQADPAEDLTTV 130 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 C VL A+C+ +GP G REI + +FLVGPYETALAHNE+LIE+ IP+ ++SSAYAKVERR Sbjct 131 CGVLGAMCVVQGPGGRREIPMSEFLVGPYETALAHNEMLIEIVIPVHGHSSSAYAKVERR 190 Query 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 240 GDWA+TAAGAAVT++G I A VGLTAV+PDP LA+++ L G+P +EE FA+AGR Sbjct 191 TGDWAVTAAGAAVTVEGGEIARAAVGLTAVDPDPSGLADIADYLTGRPPSEEAFAQAGRM 250 Query 241 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVL 278 AAQAC+PV D RGT +YKRHLA ELT RTLRTA RVL Sbjct 251 AAQACSPVGDARGTVDYKRHLASELTTRTLRTAVDRVL 288 >gi|325675989|ref|ZP_08155672.1| carbon monoxide dehydrogenase [Rhodococcus equi ATCC 33707] gi|325553227|gb|EGD22906.1| carbon monoxide dehydrogenase [Rhodococcus equi ATCC 33707] Length=294 Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 193/276 (70%), Positives = 222/276 (81%), Gaps = 4/276 (1%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 V++AI LLDRLG+ AR+VAGGHSLLPMMKLR+ANPEYL+DINDLA ELG + V + Sbjct 15 VENAIALLDRLGDEARIVAGGHSLLPMMKLRLANPEYLIDINDLAAELGDITV----EAD 70 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 VR+GAM RHR+IL+SD LA + PIFRDAERVIADPVVRNRGT+GGSLCQADPAEDL+TV Sbjct 71 AVRIGAMVRHRQILESDDLARLLPIFRDAERVIADPVVRNRGTIGGSLCQADPAEDLTTV 130 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 CTV+ AVC+ +GP+G RE+ +++FLVGPYETA+ NE+L EV IP + SSAY KVERR Sbjct 131 CTVVGAVCVIRGPTGVREVPMEEFLVGPYETAVRGNEILTEVWIPRVPSGSSAYTKVERR 190 Query 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 240 VGDWAI AAGAAV LDG I AAR+GLTAV PD LA++ L GQPA EE F AG Sbjct 191 VGDWAIAAAGAAVRLDGDRIAAARLGLTAVVPDAERLADIGDVLRGQPADEENFRRAGEL 250 Query 241 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGR 276 A QAC PVTD RGTA YKRHLA ELTVR+LRTAA R Sbjct 251 AGQACEPVTDSRGTAAYKRHLAEELTVRSLRTAAER 286 >gi|312140401|ref|YP_004007737.1| carbon monoxide dehydrogenase middle subunit [Rhodococcus equi 103S] gi|311889740|emb|CBH49057.1| putative carbon monoxide dehydrogenase middle subunit [Rhodococcus equi 103S] Length=294 Score = 355 bits (912), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 193/276 (70%), Positives = 222/276 (81%), Gaps = 4/276 (1%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 V++AI LLDRLG+ AR+VAGGHSLLPMMKLR+ANPEYL+DINDLA ELG + V + Sbjct 15 VENAIALLDRLGDEARIVAGGHSLLPMMKLRLANPEYLIDINDLAAELGDITV----EAD 70 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 VR+GAM RHR+IL+SD LA + PIFRDAERVIADPVVRNRGT+GGSLCQADPAEDL+TV Sbjct 71 AVRIGAMVRHRQILESDDLARLLPIFRDAERVIADPVVRNRGTIGGSLCQADPAEDLTTV 130 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 CTV+ AVC+ +GP+G RE+ +++FLVGPYETA+ NE+L EV IP + SSAY KVERR Sbjct 131 CTVVGAVCVIRGPTGVREVPMEEFLVGPYETAVRGNEILTEVWIPRVPSGSSAYTKVERR 190 Query 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 240 VGDWAI AAGAAV LDG I AAR+GLTAV PD LA++ L GQPA EE F AG Sbjct 191 VGDWAIAAAGAAVRLDGDRIAAARLGLTAVVPDAERLADVGDVLRGQPADEENFRRAGEL 250 Query 241 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGR 276 A QAC PVTD RGTA YKRHLA ELTVR+LRTAA R Sbjct 251 AGQACEPVTDSRGTAAYKRHLAEELTVRSLRTAAER 286 >gi|119714489|ref|YP_921454.1| molybdopterin dehydrogenase [Nocardioides sp. JS614] gi|119535150|gb|ABL79767.1| carbon monoxide dehydrogenase, medium subunit [Nocardioides sp. JS614] Length=292 Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 187/279 (68%), Positives = 226/279 (82%), Gaps = 5/279 (1%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 V+HAIGLL RLG+ AR++AGGHSLLPMMKLR+ANPEYLVDINDL EL Y+ +G P Sbjct 15 VEHAIGLLARLGDEARLIAGGHSLLPMMKLRLANPEYLVDINDLHDELSYIDIG----PT 70 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 VR+GA+TRHRE+L+SDALA VCPIFRDAERVIADP VRNRGTLGG+LCQADP+EDLS+V Sbjct 71 GVRIGALTRHRELLESDALAEVCPIFRDAERVIADPPVRNRGTLGGALCQADPSEDLSSV 130 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 CT LDA C+ +G GER +++DDF +GPYET + H+E+LIEVRIP+R + SSAYAKV+RR Sbjct 131 CTTLDASCVIRGRDGERVVSMDDFHLGPYETVVRHDEMLIEVRIPVRPHGSSAYAKVDRR 190 Query 181 VGDWAITAAGAAVTLDGQ-TILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGR 239 GDWA+TA GAA+ LD +I ARVGL AV P+ + +SA L G+ +EE +AEAG Sbjct 191 AGDWAVTAVGAALWLDEHDSIADARVGLAAVGPNTTGIPAISAALRGRAPSEEAWAEAGA 250 Query 240 RAAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVL 278 AA +C PVTD RG+A+YKRHLAGELT RTLRTA RV+ Sbjct 251 IAAASCRPVTDGRGSADYKRHLAGELTRRTLRTAWERVV 289 >gi|302866404|ref|YP_003835041.1| FAD-binding molybdopterin dehydrogenase [Micromonospora aurantiaca ATCC 27029] gi|302569263|gb|ADL45465.1| molybdopterin dehydrogenase FAD-binding [Micromonospora aurantiaca ATCC 27029] Length=290 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 172/277 (63%), Positives = 213/277 (77%), Gaps = 5/277 (1%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 VDHAI L++RLG +R++AGGHSLLPMMKLR+A+ +YL+DINDL ELGY+ G P+ Sbjct 15 VDHAISLMERLGSTSRLIAGGHSLLPMMKLRLASFDYLIDINDLHDELGYIEAG----PD 70 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 +R+GA+TRHRE+L+S L A PIF DAERVIADPVVRNRGTLGGSLCQADP+EDLS V Sbjct 71 ELRIGALTRHRELLESATLTAAFPIFADAERVIADPVVRNRGTLGGSLCQADPSEDLSAV 130 Query 121 CTVLDAVCLAKGPSG-EREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVER 179 CT LDA C+ +GP G ER +++++F VGPYETA+ E+L+E+R+P+R SAY KVER Sbjct 131 CTALDASCVIRGPGGAERVVSMEEFHVGPYETAVGDGEILVEIRLPVRPGCGSAYEKVER 190 Query 180 RVGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGR 239 R GDWA+ +AGAAV LDG I ARVGL AV P+ + E+SA L GQ E +FA+AG Sbjct 191 RAGDWAVVSAGAAVWLDGDVISDARVGLAAVGPNTTGIPEISAALRGQEPGEGLFAQAGA 250 Query 240 RAAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGR 276 AA++C P TD RG+A+YKRHLA ELT RTLR A R Sbjct 251 IAARSCDPATDQRGSADYKRHLADELTRRTLRRAVER 287 >gi|315502815|ref|YP_004081702.1| FAD-binding molybdopterin dehydrogenase protein [Micromonospora sp. L5] gi|315409434|gb|ADU07551.1| molybdopterin dehydrogenase FAD-binding protein [Micromonospora sp. L5] Length=290 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 171/277 (62%), Positives = 213/277 (77%), Gaps = 5/277 (1%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 VDHAI L++RLG +R++AGGHSLLPMMKLR+A+ +YL+DINDL ELGY+ G P+ Sbjct 15 VDHAISLMERLGSTSRLIAGGHSLLPMMKLRLASFDYLIDINDLHDELGYIEAG----PD 70 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 +R+GA+TRHRE+L+S L A PIF DAERVIADPVVRNRGTLGGSLCQADP+EDLS V Sbjct 71 ELRIGALTRHRELLESATLTAAFPIFADAERVIADPVVRNRGTLGGSLCQADPSEDLSAV 130 Query 121 CTVLDAVCLAKGPSG-EREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVER 179 CT LDA C+ +GP G ER +++++F VGPYETA+ E+L+E+R+P+R SAY KVER Sbjct 131 CTALDASCVIRGPGGAERVVSMEEFHVGPYETAVGDGEILVEIRLPVRPGCGSAYEKVER 190 Query 180 RVGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGR 239 R GDWA+ +AGAAV LDG I ARVGL AV P+ + E+SA L GQ E ++A+AG Sbjct 191 RAGDWAVVSAGAAVWLDGDVISDARVGLAAVGPNTTDIPEISAALRGQEPGESLYAQAGA 250 Query 240 RAAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGR 276 AA++C P TD RG+A+YKRHLA ELT RTLR A R Sbjct 251 IAARSCDPATDQRGSADYKRHLADELTRRTLRRAVER 287 >gi|116670588|ref|YP_831521.1| molybdopterin dehydrogenase, FAD-binding [Arthrobacter sp. FB24] gi|116610697|gb|ABK03421.1| carbon monoxide dehydrogenase, medium subunit [Arthrobacter sp. FB24] Length=292 Score = 285 bits (729), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 164/280 (59%), Positives = 207/280 (74%), Gaps = 7/280 (2%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 V+ A+ LL R G +RV+AGGHSLLPMMKLR+A PE+L+DINDL EL ++++ G + Sbjct 15 VNDALELLARHGPESRVIAGGHSLLPMMKLRLARPEWLIDINDLF-ELDFILLDG----D 69 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 +R+GA+TRH +L+S +A + PI DAE VIADPVVRNRGT+GGSLCQADPAEDLSTV Sbjct 70 HLRVGALTRHTALLESAEVARLFPIISDAEAVIADPVVRNRGTIGGSLCQADPAEDLSTV 129 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 C VL AV + +GP GER + + +F GPYETA+A +E+L EVR P+R ++ SAY KVERR Sbjct 130 CDVLRAVAVVRGPGGERLVDMKEFHRGPYETAVAPDELLCEVRFPVRPSSGSAYEKVERR 189 Query 181 VGDWAITAAGAAVTL-DGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGR 239 VGDWA+ AAGAAV+L D ++ AA +GLTA+ D + E +A L+GQ EE+F EAGR Sbjct 190 VGDWAVAAAGAAVSLADDGSVDAAAIGLTALGLDGT-IEEAAAVLLGQQPREELFVEAGR 248 Query 240 RAAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVLG 279 +AA AC PV D RG +YKRHLA ELT R LR A R G Sbjct 249 QAAIACDPVADQRGQIDYKRHLADELTRRVLRLACARAAG 288 >gi|284044479|ref|YP_003394819.1| molybdopterin dehydrogenase FAD-binding protein [Conexibacter woesei DSM 14684] gi|283948700|gb|ADB51444.1| molybdopterin dehydrogenase FAD-binding protein [Conexibacter woesei DSM 14684] Length=291 Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 157/264 (60%), Positives = 193/264 (74%), Gaps = 5/264 (1%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 V+ A+ LL RLG AR++AGGHSLLPMMKLR+A PE+L+DI+ LA ELGYV Sbjct 15 VEQALDLLARLGPEARLLAGGHSLLPMMKLRLATPEHLIDIDALAGELGYVR----EQDG 70 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 VR+GAMTRHRE+L+S+ LA IFRDAERVIADPVVRNRGT+GG+LCQADPAEDL+ V Sbjct 71 EVRIGAMTRHRELLESELLADRLAIFRDAERVIADPVVRNRGTIGGALCQADPAEDLAAV 130 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 C + A + +G GER + + +F GPYETA+ E++ E+R+PLR + SAY KVERR Sbjct 131 CAAVGARVVIRGRDGERLLDMHEFHRGPYETAVGDAEMVTEIRVPLRDHAGSAYEKVERR 190 Query 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 240 VGDWA+ AA AAV LDG +I A + LTAV D V E L G+ +E++FAEAGR Sbjct 191 VGDWAVAAAAAAVQLDGGSIAQAGIALTAVGAD-VTSREAEEALAGRQPSEDLFAEAGRL 249 Query 241 AAQACTPVTDVRGTAEYKRHLAGE 264 AA A +PVTD RG+AEYKRH AGE Sbjct 250 AAAASSPVTDQRGSAEYKRHAAGE 273 >gi|331696473|ref|YP_004332712.1| carbon-monoxide dehydrogenase [Pseudonocardia dioxanivorans CB1190] gi|326951162|gb|AEA24859.1| Carbon-monoxide dehydrogenase (acceptor) [Pseudonocardia dioxanivorans CB1190] Length=298 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 150/277 (55%), Positives = 186/277 (68%), Gaps = 2/277 (0%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 V+H + LL+R G AR+VAGGHSL+PMMKLR+A PE LVD+NDL EL + V G + Sbjct 15 VEHVVTLLERFGPEARIVAGGHSLIPMMKLRLAQPELLVDVNDLH-ELAGITVDGSVDAG 73 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 +R+GA+TRH E+L S PI DAERVIADPVVRNRGT+GGS+CQADP+EDLS V Sbjct 74 HLRIGALTRHAELLASSVAGEHFPILHDAERVIADPVVRNRGTIGGSVCQADPSEDLSGV 133 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 T L AV + +G G+R + + +F GPYETA+ E+L+E+R+PLR SAY KV+RR Sbjct 134 FTALRAVAVIRGADGDRTVPMREFFHGPYETAVRPAEILVELRVPLRTGAGSAYVKVDRR 193 Query 181 VGDWAITAAGAAVTLD-GQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGR 239 GDWA+ AAGA V+L G + +GLTAV E L G+ A E+ FA AG Sbjct 194 AGDWAVAAAGAVVSLGPGGVVDEVGIGLTAVGDADFTAVEAEDLLRGRVADEDAFAAAGA 253 Query 240 RAAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGR 276 AA+ C P D RG +YKRHLAGELTVR LR A R Sbjct 254 VAAEHCRPTADQRGPVDYKRHLAGELTVRALRDAVAR 290 >gi|258655383|ref|YP_003204539.1| FAD-binding molybdopterin dehydrogenase [Nakamurella multipartita DSM 44233] gi|258558608|gb|ACV81550.1| molybdopterin dehydrogenase FAD-binding [Nakamurella multipartita DSM 44233] Length=290 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 132/266 (50%), Positives = 169/266 (64%), Gaps = 5/266 (1%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 V+ A+ LLD+ AR++AGGHSL+PMM+LRIA PE ++DINDL EL Y+ V G + Sbjct 15 VEQALDLLDQHDGEARLIAGGHSLIPMMRLRIAQPECVIDINDLT-ELDYIRVTG----D 69 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 + +GA+TRH+ +L S + I DAERVIADP+VRNRGT+GGSLCQADPAEDLS V Sbjct 70 HLSIGALTRHKTVLASPVIGEHYAILHDAERVIADPIVRNRGTVGGSLCQADPAEDLSAV 129 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTSSAYAKVERR 180 L A + + +G R + + + GPY+T L E+L EVRIP+R SAY KVERR Sbjct 130 LAALRAEAVIRSRTGSRVVPVRELDDGPYQTVLEDAEILTEVRIPIRPGAGSAYEKVERR 189 Query 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 240 GDWA+ A GA + LDG + + L A+ + E L G+ T++ AEAGR Sbjct 190 TGDWAVAAVGAYLVLDGGVVSDVGIALAALGVEHGCATEAEDYLRGREITDQTLAEAGRL 249 Query 241 AAQACTPVTDVRGTAEYKRHLAGELT 266 AA A P D RG YKRHLA ELT Sbjct 250 AAAASRPSPDQRGPVVYKRHLADELT 275 >gi|209515295|ref|ZP_03264162.1| molybdopterin dehydrogenase FAD-binding [Burkholderia sp. H160] gi|209504276|gb|EEA04265.1| molybdopterin dehydrogenase FAD-binding [Burkholderia sp. H160] Length=288 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 117/275 (43%), Positives = 156/275 (57%), Gaps = 8/275 (2%) Query 4 AIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN-LV 62 AI LL+ GE A+V+AGGHSLLPMMKLR A+P +L+D+ LA + GI + + Sbjct 17 AIALLNEYGERAKVLAGGHSLLPMMKLRFADPGHLIDLGKLAE------LKGIREADGEI 70 Query 63 RLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTVCT 122 R+GAMT E++ S+ L CP+ + R I+DP VR RGTLGG L ADP D + Sbjct 71 RIGAMTTENELIWSELLQTKCPLIVEGARQISDPQVRYRGTLGGDLSHADPGNDHPALMM 130 Query 123 VLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPL-RHNTSSAYAKVERRV 181 VLDA + G G R ++ DDF +G Y T L E++ E+RIP T YAK++R+ Sbjct 131 VLDASFVLAGEHGVRIVSADDFYLGTYATLLEPGEIMTEIRIPTPPTGTGYCYAKLKRKT 190 Query 182 GDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRRA 241 GD+A A + G T+ A R+ LT V + + L G+P E AEA R A Sbjct 191 GDFATAATAVTLRASGGTVSAVRIALTNVADKAIRARDAEQYLQGKPLDEPALAEAARLA 250 Query 242 AQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGR 276 C PV D+RG +YK +AGE+T R L TA R Sbjct 251 MGVCAPVADLRGDIDYKTAMAGEMTRRALMTAYAR 285 >gi|269928693|ref|YP_003321014.1| molybdopterin dehydrogenase FAD-binding protein [Sphaerobacter thermophilus DSM 20745] gi|269788050|gb|ACZ40192.1| molybdopterin dehydrogenase FAD-binding protein [Sphaerobacter thermophilus DSM 20745] Length=292 Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 122/275 (45%), Positives = 163/275 (60%), Gaps = 13/275 (4%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGI--NN 58 + A+ LL G A+++AGG SL+P+MK R P +VD+N + P LG GI N Sbjct 14 LSEAVALLSEHGLDAKLLAGGQSLIPLMKFRFVEPAVIVDLNRI-PGLG-----GIRREN 67 Query 59 PNLVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLS 118 +LV LGA+TR E+ D +A+ PI D VIADP+VRN T+GG+L ADPA D Sbjct 68 GHLV-LGALTREAELEDDEAVRTEFPIILDTAVVIADPLVRNLATVGGNLAHADPANDHP 126 Query 119 TVCTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTS-SAYAKV 177 L A +A GP+GER I ID+F V + TALA +EVL +RIP+ S AY K Sbjct 127 ATMLALGAEIVATGPNGERTIPIDEFFVDTFTTALAADEVLTAIRIPIPGPRSGGAYVKF 186 Query 178 ERRVGDWAITAAGAAVTLD--GQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFA 235 ER+ GD+AI A +TLD GQ + + R+GLT VN P+ + A L+G+ TEE Sbjct 187 ERKAGDYAIAGAAVQLTLDEAGQ-VTSVRIGLTNVNYMPMRAKQAEAALLGKEPTEEAIR 245 Query 236 EAGRRAAQACTPVTDVRGTAEYKRHLAGELTVRTL 270 EA R A + C P +D+RG A+YKR + +T R L Sbjct 246 EAARLAGEECDPSSDLRGPADYKRAVTRTVTARAL 280 >gi|119714495|ref|YP_921460.1| molybdopterin dehydrogenase [Nocardioides sp. JS614] gi|119535156|gb|ABL79773.1| molybdopterin dehydrogenase, FAD-binding protein [Nocardioides sp. JS614] Length=291 Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 115/271 (43%), Positives = 154/271 (57%), Gaps = 5/271 (1%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 +D AI LL A+V+AGG SL+P+MKLR A PE LVDIN+L P L ++ V Sbjct 14 IDEAIQLLHEGAGEAKVLAGGQSLVPLMKLRFAAPELLVDINNL-PGLDHLDVAADGG-- 70 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 +R+GA+ RHR++ S +A P+ A +IADP+VR RGTL GSLC ADP D + V Sbjct 71 -IRVGALCRHRDLERSLEVARAQPVMAAAAPLIADPIVRTRGTLVGSLCHADPQGDWAAV 129 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPL-RHNTSSAYAKVER 179 T L +A+GP G R I I DF+ GP++ L ++EV +E +P R + + K+ER Sbjct 130 VTALGGHVVAQGPGGRRSIPITDFVTGPFQNVLEYDEVAVEAVLPAPRARVAGGFLKLER 189 Query 180 RVGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGR 239 RVGD+A A+ LDG + A + LT V V + LVGQP T E A Sbjct 190 RVGDFATAGTAVALELDGDRVTRAGIALTGVGSRTVDARAAAEALVGQPLTAEAIGRAAD 249 Query 240 RAAQACTPVTDVRGTAEYKRHLAGELTVRTL 270 AA+ P +D RG+A YKRH+ R L Sbjct 250 LAAEVAQPTSDHRGSASYKRHVIHTFVTRIL 280 >gi|325969073|ref|YP_004245265.1| molybdopterin dehydrogenase, FAD-binding protein [Vulcanisaeta moutnovskia 768-28] gi|323708276|gb|ADY01763.1| molybdopterin dehydrogenase, FAD-binding protein [Vulcanisaeta moutnovskia 768-28] Length=272 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 107/280 (39%), Positives = 162/280 (58%), Gaps = 12/280 (4%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 +D A+ +L+ E A+++AGG SL+PM+K R+ P YLVDIN ++ L Y+ + + Sbjct 1 MDEAVKVLE-TDENAKILAGGQSLMPMLKFRLIRPSYLVDINRVS-NLSYISI----ESD 54 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 +R+GA+ RH ++ + L + P + I DP +RN GT+ GSL ADPA D Sbjct 55 KIRIGALARHHQVEVNRDLWKIYPALLETAVQIGDPQIRNLGTMAGSLAHADPAADWPAT 114 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIP-LRHNTSSAYAKVER 179 L A G SG RE+ ++DF+ GP+ TAL EV+ E+ IP L N S+Y K+ER Sbjct 115 LIALRASVKILGSSGTREVPVEDFITGPFTTALGKGEVISEIVIPRLSGNIKSSYVKLER 174 Query 180 RVGDWAITAAGAAVTLDGQT---ILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAE 236 + GD+A+ G AVTL + + A +G+TA P P E L+G+ T++V E Sbjct 175 KAGDFAVV--GVAVTLRLSSEGYVEDASIGITAAGPRPFRARETEKALIGRKLTDDVIEE 232 Query 237 AGRRAAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGR 276 A RA + +P++D+RG+AEYKR + +T R ++ A R Sbjct 233 AAERAMKESSPISDIRGSAEYKRAMVKVITRRAIKNALSR 272 >gi|307594838|ref|YP_003901155.1| molybdopterin dehydrogenase FAD-binding protein [Vulcanisaeta distributa DSM 14429] gi|307550039|gb|ADN50104.1| molybdopterin dehydrogenase FAD-binding protein [Vulcanisaeta distributa DSM 14429] Length=285 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 108/281 (39%), Positives = 164/281 (59%), Gaps = 14/281 (4%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 ++ A+ +L+ E A+++AGG SL+PM+KLR+ P YLVDIN + P L Y+ + G + Sbjct 14 LEEAVKVLES-DENAKILAGGQSLMPMLKLRLIRPSYLVDINRV-PNLSYISIEG----D 67 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 +R+GA+ RH ++ + L + P + I DP +RN GT+ GSL ADPA D Sbjct 68 KIRIGALVRHHQVEINRDLWKIYPALPETAIQIGDPQIRNLGTMAGSLAHADPAADWPAT 127 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIP-LRHNTSSAYAKVER 179 L A PSG RE+ ++DF+ GP+ TAL EV+ E+ IP L S+Y K+ER Sbjct 128 LIALRASVRILSPSGIREVPVEDFITGPFTTALGRGEVISEIVIPRLSGTVKSSYVKLER 187 Query 180 RVGDWAITAAGAAVTL----DGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFA 235 + GD+A+ G AV L DG ++ A +G+TA P P E L+G+ T++V Sbjct 188 KAGDFAVV--GVAVMLRLSPDG-SVEDASIGITAAGPKPFRAREAEKALIGRKLTDDVIE 244 Query 236 EAGRRAAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGR 276 +A RA + +P++D+RG+AEYKR + +T R ++ A R Sbjct 245 DAAERAMKESSPISDIRGSAEYKRAMVKVMTRRAIKNALSR 285 >gi|296159235|ref|ZP_06842061.1| molybdopterin dehydrogenase FAD-binding [Burkholderia sp. Ch1-1] gi|295890494|gb|EFG70286.1| molybdopterin dehydrogenase FAD-binding [Burkholderia sp. Ch1-1] Length=288 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 112/276 (41%), Positives = 152/276 (56%), Gaps = 6/276 (2%) Query 4 AIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPNLVR 63 AI LL G+ A+++AGGHSLLPMMKLR A P +L+D+ L+ G GG +R Sbjct 17 AIALLSEYGDEAKLLAGGHSLLPMMKLRFAEPAHLIDLGKLSELKGIRESGGE-----IR 71 Query 64 LGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTVCTV 123 +GAMT E++ S+ L CP+ + R I+DP VR RGTLGG L DP D + Sbjct 72 IGAMTTENELIWSELLQTKCPLIVEGARQISDPQVRYRGTLGGDLSHGDPGNDHPALMMA 131 Query 124 LDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPL-RHNTSSAYAKVERRVG 182 L A + G GER + D F +G Y T L E++ E+RIP T YAK++R+ G Sbjct 132 LGASFVLAGGQGERVVPADGFFLGTYTTQLEPGEIMTEIRIPTPAPGTGYCYAKLKRKTG 191 Query 183 DWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRRAA 242 D+A AA + + + R+ LT V + ++ L G+P + AEA R A Sbjct 192 DFATAAAAVTLRISAGAVSDVRIALTNVAETALRASDAEHALQGKPLDDATLAEAVRLAM 251 Query 243 QACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVL 278 AC PV D+RG AEYK +AGE+T R L +A R L Sbjct 252 AACAPVADLRGDAEYKTAMAGEMTRRALTSAYMRAL 287 >gi|10835788|pdb|1FFV|C Chain C, Carbon Monoxide Dehydrogenase From Hydrogenophaga Pseudoflava gi|10835791|pdb|1FFV|F Chain F, Carbon Monoxide Dehydrogenase From Hydrogenophaga Pseudoflava Length=287 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 109/277 (40%), Positives = 157/277 (57%), Gaps = 6/277 (2%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 V A+ LL +LG A+++AGGHSLLPMMKLR A PE+L+DIN + PEL + G + Sbjct 14 VGEAVALLGQLGSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRI-PELRGIREEG----S 68 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 V +GAMT +++ S + A P+ +A ++IADP VRNRGT+GG + DP D + Sbjct 69 TVVIGAMTVENDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDPGNDHPAL 128 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIP-LRHNTSSAYAKVER 179 ++A + +GP+G R + D F +G Y T L NEV++E+R+P T AY K++R Sbjct 129 SIAVEAHFVLEGPNGRRTVPADGFFLGTYMTLLEENEVMVEIRVPAFAQGTGWAYEKLKR 188 Query 180 RVGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGR 239 + GDWA + G T+ R+ LT V P + A L+G+ T+E A Sbjct 189 KTGDWATAGCAVVMRKSGNTVSHIRIALTNVAPTALRAEAAEAALLGKAFTKEAVQAAAD 248 Query 240 RAAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGR 276 A C P D+RG A+YK +AG++ R L A R Sbjct 249 AAIAICEPAEDLRGDADYKTAMAGQMVKRALNAAWAR 285 >gi|91783670|ref|YP_558876.1| carbon monoxide dehydrogenase, medium subunit [Burkholderia xenovorans LB400] gi|91687624|gb|ABE30824.1| carbon monoxide dehydrogenase, medium subunit [Burkholderia xenovorans LB400] Length=288 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 112/276 (41%), Positives = 153/276 (56%), Gaps = 6/276 (2%) Query 4 AIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPNLVR 63 AI LL G+ A+++AGGHSLLPMMKLR A P +L+D+ L EL + G +R Sbjct 17 AIALLSEYGDEAKLLAGGHSLLPMMKLRFAEPAHLIDLGKLT-ELKGIREAGAE----IR 71 Query 64 LGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTVCTV 123 +GAMT E++ S+ L CP+ + R I+DP VR RGTLGG L DP D + Sbjct 72 IGAMTTENELIWSELLQTRCPLIVEGARQISDPQVRYRGTLGGDLSHGDPGNDHPALMMA 131 Query 124 LDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPL-RHNTSSAYAKVERRVG 182 L A + G GER + D F +G Y T L E++ E+RIP T YAK++R+ G Sbjct 132 LGASFVLTGGQGERVVPADGFFLGTYMTQLEPGEIMTEIRIPTPAPGTGYCYAKLKRKTG 191 Query 183 DWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRRAA 242 D+A AA + + + R+ LT V + ++ L G+P + AEA R A Sbjct 192 DFATAAAAVTLRISAGAVSEVRIALTNVADTALRASDAEHALQGRPLDDAALAEAVRLAM 251 Query 243 QACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVL 278 AC PV D+RG A+YK +AGE+T R L TA+ R L Sbjct 252 AACAPVADLRGDADYKTAMAGEMTRRALTTASMRAL 287 >gi|21903402|sp|P19914.2|DCMM_HYDPS RecName: Full=Carbon monoxide dehydrogenase medium chain; Short=CO dehydrogenase subunit M; Short=CO-DH M gi|4098680|gb|AAD00361.1| CutM [Hydrogenophaga pseudoflava] Length=287 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 107/277 (39%), Positives = 156/277 (57%), Gaps = 6/277 (2%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 V A+ LL +LG A+++AGGHSLLPMMKLR A PE+L+DIN + PEL + G + Sbjct 14 VGEAVALLGQLGSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRI-PELRGIREEG----S 68 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 V +GAMT +++ S + A P+ +A ++IADP VRNRGT+GG + P D + Sbjct 69 TVVIGAMTVENDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGHPGNDHPAL 128 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIP-LRHNTSSAYAKVER 179 ++A + +GP+G R + D F +G Y T L NEV++E+R+P T AY K++R Sbjct 129 SIAVEAHFVLEGPNGRRTVPADGFFLGTYMTLLEENEVMVEIRVPAFAQGTGWAYEKLKR 188 Query 180 RVGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGR 239 + GDWA + G T+ R+ LT V P + + L+G+ T+E A Sbjct 189 KTGDWATAGCAVVMRKSGNTVSHIRIALTNVAPTALRREGGRSRLLGKAFTKEAVQAAAD 248 Query 240 RAAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGR 276 A C P D+RG A+YK +AG++ R L A R Sbjct 249 AAIAICEPAEDLRGDADYKTAMAGQMVKRALNAAWAR 285 >gi|114320716|ref|YP_742399.1| carbon monoxide dehydrogenase, medium subunit [Alkalilimnicola ehrlichii MLHE-1] gi|114227110|gb|ABI56909.1| carbon monoxide dehydrogenase, medium subunit [Alkalilimnicola ehrlichii MLHE-1] Length=289 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 114/280 (41%), Positives = 156/280 (56%), Gaps = 6/280 (2%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 VD A+ LL R GE +++AGGHSLLPMMKLR A P +L+D+N + EL V G + Sbjct 14 VDEALQLLSRYGEDGKLLAGGHSLLPMMKLRFAEPAHLIDLNPIE-ELRGVREDG----D 68 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 + +G MT + SD +A CP+ + +IADP VRNRGT+GG DP D V Sbjct 69 HLLIGTMTTESALQQSDLVARHCPVLPEVVALIADPQVRNRGTIGGDALLGDPGNDHPAV 128 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIP-LRHNTSSAYAKVER 179 L+A + +GP GER + F +GPY T LA +E+ +RIP AY K++R Sbjct 129 LMALEAEFVIRGPKGERREPANGFYLGPYLTRLADDELATAIRIPKCPPGQGYAYCKLKR 188 Query 180 RVGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGR 239 + GD+A AA ++L G T+ AR+ LT V P + + L GQ + +A + Sbjct 189 KTGDYATAAACCLLSLAGGTVEKARLSLTNVGPTALRAEDAEDLLQGQTLDDGRIEQAAQ 248 Query 240 RAAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVLG 279 A C P D+RG+ EYK H+AGE+T R LR A R G Sbjct 249 AAMSICEPAEDLRGSPEYKTHIAGEMTRRALRLALQRARG 288 >gi|10835782|pdb|1FFU|C Chain C, Carbon Monoxide Dehydrogenase From Hydrogenophaga Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of The Molybdenum Cofactor gi|10835785|pdb|1FFU|F Chain F, Carbon Monoxide Dehydrogenase From Hydrogenophaga Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of The Molybdenum Cofactor Length=287 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 109/277 (40%), Positives = 157/277 (57%), Gaps = 6/277 (2%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 V A+ LL +LG A+++AGGHSLLPMMKLR A PE+L+DIN + PEL + G + Sbjct 14 VGEAVALLGQLGSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRI-PELRGIREEG----S 68 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 V +GAMT +++ S + A P+ +A ++IADP VRNRGT+GG + DP D + Sbjct 69 TVVIGAMTVENDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDPGNDHPAL 128 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIP-LRHNTSSAYAKVER 179 ++A + +GP+G R + D F +G Y T L NEV++E+R+P T AY K++R Sbjct 129 SIAVEAHFVLEGPNGRRTVPADGFFLGTYMTLLEENEVMVEIRVPAFAAGTGWAYEKLKR 188 Query 180 RVGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGR 239 + GDWA + G T+ R+ LT V P + A L+G+ T+E A Sbjct 189 KTGDWATAGCAVVMRKSGGTVSHIRIALTNVAPTALRAEAAEAALLGKAFTKEAVQAAAD 248 Query 240 RAAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGR 276 A C P D+RG A+YK +AG++ R L A R Sbjct 249 AAIAICEPAEDLRGDADYKTAMAGQMVKRALNAAWAR 285 >gi|313902887|ref|ZP_07836283.1| carbon monoxide dehydrogenase, medium subunit [Thermaerobacter subterraneus DSM 13965] gi|313466822|gb|EFR62340.1| carbon monoxide dehydrogenase, medium subunit [Thermaerobacter subterraneus DSM 13965] Length=290 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 112/274 (41%), Positives = 160/274 (59%), Gaps = 9/274 (3%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 V A+ LL + G A+V+AGG SL+PM++ R+ P LVDIN + +L Y+ Sbjct 14 VAEAVQLLRKHGYEAKVLAGGQSLIPMLRFRLLEPALLVDINRIE-DLAYLR----EEDG 68 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 +R+GA+TRH ++ ++ L P+ RV+ADP+VRNRGT+ GSL ADPA D Sbjct 69 FLRIGALTRHADVENAPGLEKRYPLLVATARVVADPLVRNRGTVAGSLVHADPAGDWGAA 128 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPL-RHNTSSAYAKVER 179 A + GP G R ++ID+FLV + TA+ +E+L EVR+P+ + AY K+ER Sbjct 129 MLAAGAQVVVTGPDGSRTLSIDEFLVDTFTTAMGEDELLTEVRVPIPPERSGGAYLKLER 188 Query 180 RVGDWAITAAGAAVTLD--GQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEA 237 ++GD+AI A G VTL+ G+ A +GL AV P + + LVG+P T + AEA Sbjct 189 KLGDFAIAAVGVQVTLNAAGECTRAG-IGLCAVGPISLRASRAEEYLVGKPLTADTIAEA 247 Query 238 GRRAAQACTPVTDVRGTAEYKRHLAGELTVRTLR 271 R AA+ P +D RG EYKR + LT R L+ Sbjct 248 ARLAAEQAEPTSDQRGPEEYKRDMVRVLTQRALQ 281 >gi|229582557|ref|YP_002840956.1| molybdopterin dehydrogenase FAD-binding [Sulfolobus islandicus Y.N.15.51] gi|228013273|gb|ACP49034.1| molybdopterin dehydrogenase FAD-binding [Sulfolobus islandicus Y.N.15.51] Length=295 Score = 188 bits (477), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 101/282 (36%), Positives = 167/282 (60%), Gaps = 8/282 (2%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 + A+ LL + G+ A+++AGG SL+ MKLRI +P+Y++DIN++ P L Y+ + Sbjct 17 LKEALELLSKYGDEAKILAGGQSLIISMKLRIISPKYIIDINNI-PNLSYIN----ESEG 71 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 +RLGA+TR+ ++ SD + + P+ ++ + +ADP+VRN GT+GG++C P +L V Sbjct 72 YLRLGALTRYSDLEYSDLIKSKYPLLYESVKHLADPIVRNWGTVGGNVCYNHPGNNLPAV 131 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPL-RHNTSSAYAKVER 179 +A +A SG R I DF +GP++TAL +E+L E+RIP+ + Y K+ER Sbjct 132 MLAYNAEFVATSLSGSRVIKATDFFLGPFQTALRQDEILTEIRIPIPKPRNGGHYIKLER 191 Query 180 RVGDWAITAAGAAVTLDGQ-TILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAG 238 RVGD+AI + ++LD T+ A +G+ + +PV + + LVG + + E G Sbjct 192 RVGDFAIISTAVNLSLDYDGTVREAGIGIGGASNNPVKVTKAEESLVGNKINDNLIKEVG 251 Query 239 RRAAQACTPVTDVRG-TAEYKRHLAGELTVRTLRTAAGRVLG 279 + PV + G A+YK+ +AG +T+R ++ A R LG Sbjct 252 KIVTDVIKPVEEPFGPPADYKKAMAGVVTIRAIKQAIKRALG 293 >gi|108802967|ref|YP_642904.1| molybdopterin dehydrogenase protein [Rubrobacter xylanophilus DSM 9941] gi|108764210|gb|ABG03092.1| molybdopterin dehydrogenase, FAD-binding protein [Rubrobacter xylanophilus DSM 9941] Length=283 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 117/277 (43%), Positives = 161/277 (59%), Gaps = 8/277 (2%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 VDHAI LL GE A+++AGGHSLLP+MKLR+A P LVDI L+ +L YV G + Sbjct 14 VDHAIELLGEHGEEAKLLAGGHSLLPIMKLRLAAPAVLVDIGRLS-DLSYVRDAG----D 68 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 + +GA+TRH ++ L C + ++ DP VR+RGT+GGS+ DPA DL +V Sbjct 69 HIAIGALTRHADVEHDRLLQEQCGLLAYTASLVGDPQVRHRGTIGGSVAHGDPASDLPSV 128 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIP-LRHNTSSAYAKVER 179 LDA + +G GER +A DF +TALA +EVL E+R+P L N AY K R Sbjct 129 LLALDADFVVRGSGGERTVAARDFFQDYLQTALAPDEVLTEIRVPKLGPNAGWAYQKFNR 188 Query 180 RVGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGR 239 R DWA+ A V +I +ARVGLT + P+ + + + L G A AEA + Sbjct 189 RAQDWAVVGVAAVVERQNGSISSARVGLTNMGSTPLRASAVESALSGADAGS--VAEAAQ 246 Query 240 RAAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGR 276 AA+ +P +D+ +AE+++HLA LT R L A R Sbjct 247 SAAEGTSPASDIAASAEFRQHLARVLTRRALEEALSR 283 >gi|329903331|ref|ZP_08273424.1| Carbon monoxide dehydrogenase medium chain [Oxalobacteraceae bacterium IMCC9480] gi|327548409|gb|EGF33087.1| Carbon monoxide dehydrogenase medium chain [Oxalobacteraceae bacterium IMCC9480] Length=288 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 106/274 (39%), Positives = 153/274 (56%), Gaps = 6/274 (2%) Query 4 AIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPNLVR 63 AI LLD+ G+ A+++AGGHS+LPMMKLR A P +L+D+ +A G VG N +R Sbjct 17 AIALLDQYGDEAKLLAGGHSMLPMMKLRFAEPAHLIDLRKIAALKGIREVG-----NEIR 71 Query 64 LGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTVCTV 123 +GAMT E++ S L CP+ + +I+DP VR GTLGG + ADPA D + Sbjct 72 IGAMTTENELIWSPLLQQKCPLLVEGAGLISDPQVRYMGTLGGDISHADPANDHPALMIA 131 Query 124 LDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPL-RHNTSSAYAKVERRVG 182 L A + +GER ++ D + +G Y T L E++ E+RIP+ + S YAK++R+ G Sbjct 132 LGASFVLTSAAGERVVSADGYFLGLYYTLLEAGEIMTEIRIPIPAAGSGSCYAKLKRKTG 191 Query 183 DWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRRAA 242 D+A AA + + G + + LT + + + L G+P + EA R A Sbjct 192 DYATAAAAVLLRMQGGVVAEVAITLTNLGETALKANDAENYLRGKPLDDATIREAARLAM 251 Query 243 QACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGR 276 C P D+RG EYK +AGE+T R LRTA R Sbjct 252 AICEPAADLRGDIEYKTAMAGEMTQRALRTALSR 285 >gi|229578654|ref|YP_002837052.1| molybdopterin dehydrogenase FAD-binding [Sulfolobus islandicus Y.G.57.14] gi|228009368|gb|ACP45130.1| molybdopterin dehydrogenase FAD-binding [Sulfolobus islandicus Y.G.57.14] Length=295 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 101/282 (36%), Positives = 166/282 (59%), Gaps = 8/282 (2%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 + A+ LL + G+ A+++AGG SL+ MKLRI +P+Y++DIN++ P L Y+ + Sbjct 17 LKEALELLSKYGDEAKILAGGQSLIISMKLRIISPKYIIDINNI-PNLSYIN----ESEG 71 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 +RLG +TR+ ++ SD + + P+ ++ + +ADP+VRN GT+GG++C P +L V Sbjct 72 YLRLGTLTRYSDLEYSDLIKSKYPLLYESVKHLADPIVRNWGTVGGNVCYNHPGNNLPAV 131 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPL-RHNTSSAYAKVER 179 +A +A SG R I DF +GP++TAL +E+L E+RIP+ + Y K+ER Sbjct 132 MLAYNAEFVATSLSGSRVIKATDFFLGPFQTALRQDEILTEIRIPIPKPRNGGHYIKLER 191 Query 180 RVGDWAITAAGAAVTLDGQ-TILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAG 238 RVGD+AI + ++LD T+ A +G+ + +PV + + LVG + + E G Sbjct 192 RVGDFAIISTAVNLSLDYDGTVREAGIGIGGASNNPVKVTKAEELLVGNKINDNLIKEVG 251 Query 239 RRAAQACTPVTDVRG-TAEYKRHLAGELTVRTLRTAAGRVLG 279 + PV + G A+YK+ +AG LT+R ++ A R LG Sbjct 252 KIVTDVIKPVEEPFGPPADYKKAMAGVLTIRAIKQAIKRALG 293 >gi|332667195|ref|YP_004449983.1| carbon-monoxide dehydrogenase (acceptor) [Haliscomenobacter hydrossis DSM 1100] gi|332336009|gb|AEE53110.1| Carbon-monoxide dehydrogenase (acceptor) [Haliscomenobacter hydrossis DSM 1100] Length=290 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 104/276 (38%), Positives = 160/276 (58%), Gaps = 9/276 (3%) Query 4 AIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPNLVR 63 AI LL + G A++++GGHSL+PMMKLR+A PE+++DI+ + + Y+ G ++ Sbjct 17 AIALLQKYGSDAKIMSGGHSLIPMMKLRLATPEHVIDISGI-KGMEYIHEEG----GYLK 71 Query 64 LGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTVCTV 123 +GA+T+ + +S + + P+ DA ++IADP VRN T+GG+L D A D V Sbjct 72 IGALTKEVALEESQLIHSKYPLITDATKMIADPSVRNLATVGGNLAHGDAANDHPAVMLA 131 Query 124 LDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPL-RHNTSSAYAKVERRVG 182 L A LA GP+G+REI+IDDF +G + TAL +E+L E+RIP+ + AY K+ER+VG Sbjct 132 LRATVLASGPNGDREISIDDFFLGFFTTALEADEILTEIRIPIPPARSGGAYLKMERKVG 191 Query 183 DWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSA--GLVGQPATEEVFAEAGRR 240 D+A ++LD ++G+ N +L A L GQ ++++ +A Sbjct 192 DYATAGVAVQLSLDASG-HCQQIGIALTNVSAASLRSSRAEEALRGQMLSDDLIQKAATM 250 Query 241 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGR 276 AAQ C P D+RG+ YKR + L R + A R Sbjct 251 AAQDCDPNADLRGSVAYKRSIVKTLVARAIHIAVER 286 >gi|298244377|ref|ZP_06968183.1| molybdopterin dehydrogenase FAD-binding [Ktedonobacter racemifer DSM 44963] gi|297551858|gb|EFH85723.1| molybdopterin dehydrogenase FAD-binding [Ktedonobacter racemifer DSM 44963] Length=292 Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 116/282 (42%), Positives = 160/282 (57%), Gaps = 8/282 (2%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 V AI LL + G+ A+V+AGGHSL+P+++ R+A+P L+DIN +A EL Y+ Sbjct 14 VPEAIALLQQHGDEAKVLAGGHSLIPILRFRLASPSILIDINRIA-ELEYIR----EADG 68 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 ++ +GA+TR E+ S + PI +D +V+ADPVVRN T+GG+L ADPA D Sbjct 69 VLHIGALTREAELDHSSLIRVRYPILQDTAKVVADPVVRNWATVGGNLAHADPANDHPAT 128 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLV-GPYETALAHNEVLIEVRIPL-RHNTSSAYAKVE 178 L A +A GP G+R I I+ F +ET L E+L E+RIP ++ AY K+E Sbjct 129 MIALGASVVAVGPGGQRVIPIEAFFTDSSFETTLDPLEILTEIRIPAPPEHSGGAYLKLE 188 Query 179 RRVGDWAITAAGAAVTLD-GQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEA 237 R+VGD+AI V LD G + A +GLT V P P+ + L+G+ E A Sbjct 189 RKVGDYAIAGVAVYVVLDSGGLVTHAGIGLTNVGPSPLKARDAEQALLGKHFDETAIRRA 248 Query 238 GRRAAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVLG 279 AA A P +D RGTAEYKR + L R LR A+ R G Sbjct 249 ADLAAAASQPTSDTRGTAEYKRAMVRTLCSRALRKASVRAAG 290 >gi|221635972|ref|YP_002523848.1| nicotine dehydrogenase chain A [Thermomicrobium roseum DSM 5159] gi|221157950|gb|ACM07068.1| nicotine dehydrogenase chain A [Thermomicrobium roseum DSM 5159] Length=291 Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 122/278 (44%), Positives = 166/278 (60%), Gaps = 7/278 (2%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 V+ A+ LL +LG A+V++GG SL+PMMK R+A P Y++DIN + P L ++ Sbjct 14 VEEAVSLLAQLGSDAKVLSGGQSLIPMMKFRLAEPNYVIDINRV-PGLDFLE----ERDG 68 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 L+R+GA+ R + S + PI D VIADP+VRN T+GG+L DPA D Sbjct 69 LLRIGALVRESTLERSPLIRERYPILHDTALVIADPLVRNLATVGGNLAHGDPANDHPAT 128 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTS-SAYAKVER 179 L A +A GP GER I ID+F V + TAL +E+L E+RIP+ S AY K ER Sbjct 129 MLALRAQVVANGPKGERVIPIDEFFVDTFVTALEPDELLTEIRIPVSPPRSGGAYLKFER 188 Query 180 RVGDWAITAAGAAVTLDGQ-TILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAG 238 +VGD+AI AA A + LD I+ A +GLT + P+ L+GQP ++E+F EA Sbjct 189 KVGDYAIAAAAAFLALDESGLIVQAGIGLTNLAYKPLRATAAEQVLIGQPPSDELFREAA 248 Query 239 RRAAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGR 276 RAAQA PV+D+RG A+YKR +A + R LR A R Sbjct 249 ERAAQATDPVSDLRGPADYKRAVARTMVFRALRRALER 286 >gi|91780099|ref|YP_555306.1| carbon monoxide dehydrogenase, medium subunit [Burkholderia xenovorans LB400] gi|91692759|gb|ABE35956.1| Putative carbon monoxide dehydrogenase, medium chain (CoxM) [Burkholderia xenovorans LB400] Length=288 Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 109/276 (40%), Positives = 147/276 (54%), Gaps = 8/276 (2%) Query 3 HAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN-L 61 A+ LL G+ A+++AGGHSLLPMMKLR A P +L+D+ LA + GI + Sbjct 16 EALALLGEYGDEAKLLAGGHSLLPMMKLRFAEPGHLIDLGKLAE------LKGIREADDE 69 Query 62 VRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTVC 121 +R+GAMT E++ S+ L CP+ + R I+DP VR RGTLGG L DP D + Sbjct 70 IRIGAMTTENELIWSELLQTRCPLIVEGARQISDPQVRYRGTLGGDLSHGDPGNDHPALM 129 Query 122 TVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPL-RHNTSSAYAKVERR 180 L A + G GER ++ F V Y T L E++ E+RIP T YAK++R+ Sbjct 130 MALGASFVLAGEQGERVVSAASFFVSTYTTLLEPGEIMTEIRIPTPPAGTGYCYAKLKRK 189 Query 181 VGDWAITAAGAAVTLDGQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAGRR 240 GD+A AA + + + R+ LT V + L G+P E AEA R Sbjct 190 TGDFATAAAAVTLRIGTAAVGEVRIALTNVAETAIRATAAEQYLQGKPLDEPAIAEAARL 249 Query 241 AAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGR 276 A C PV D+RG EYK +AGE+T R L TA R Sbjct 250 AMAVCAPVADLRGDVEYKTAMAGEMTRRALITAYAR 285 >gi|298242130|ref|ZP_06965937.1| molybdopterin dehydrogenase FAD-binding [Ktedonobacter racemifer DSM 44963] gi|297555184|gb|EFH89048.1| molybdopterin dehydrogenase FAD-binding [Ktedonobacter racemifer DSM 44963] Length=288 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 104/278 (38%), Positives = 159/278 (58%), Gaps = 7/278 (2%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 VD A+ LL + G+ A+V+AGGHSL+P MKLR++ PE+L+DI+ + EL Y+ + Sbjct 15 VDEALALLQQYGDEAKVLAGGHSLIPAMKLRLSQPEHLIDISKIQ-ELAYIR----EEND 69 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 ++ +GA+T + ++ SD L V P+ + IAD VRNRGT+GGS+ ADP+ D+ V Sbjct 70 VIAIGALTTYTQVEYSDLLRRVFPLMPECASHIADQQVRNRGTIGGSIAHADPSADMPGV 129 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPL-RHNTSSAYAKVER 179 L A + +GP+G+R ++ D+F++G +ET L NE+L+E+ P T SAY K+ Sbjct 130 ILALKAELVIQGPNGKRTVSADEFILGTFETVLEPNELLVELLFPKPAAKTGSAYTKLSN 189 Query 180 RVGDWAITAAGAAVTLDG-QTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAG 238 R +AI A ++LD T AA V +T + L+G+ T E AEA Sbjct 190 RASHYAIAGCAAVLSLDSDNTCSAASVVVTGAAMQTARASATELALIGKQLTSETIAEAA 249 Query 239 RRAAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGR 276 AA+ V D+ G+ EY+R + +T R + A R Sbjct 250 SHAAEGLELVGDIHGSPEYRRQMVSVMTRRAIEQALER 287 >gi|284175382|ref|ZP_06389351.1| molybdopterin dehydrogenase FAD-binding protein [Sulfolobus solfataricus 98/2] gi|261602776|gb|ACX92379.1| molybdopterin dehydrogenase FAD-binding protein [Sulfolobus solfataricus 98/2] Length=292 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 101/282 (36%), Positives = 165/282 (59%), Gaps = 8/282 (2%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 ++ A+ L + E A+V+AGG SL+ MKLRI +P+Y++D+N++ P L Y+ I + Sbjct 14 LNEALEFLSKYSEDAKVLAGGQSLIIAMKLRIVSPKYVIDLNNI-PNLSYI----IESDG 68 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 +++GA+TR+ ++ SD + + P+ +A + +ADP+VRN GT+GG++C P +L V Sbjct 69 YLKIGALTRYSDLEYSDLIKSKYPLLHEAIKHLADPIVRNWGTVGGNVCYNHPGNNLPAV 128 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPL-RHNTSSAYAKVER 179 +A +A SG R I DF +GP++TAL +E+L EVRIP+ + Y K+ER Sbjct 129 MLAYNAEFVATSLSGSRIIKAKDFFLGPFQTALRPDEILTEVRIPIPQPRNGGHYIKLER 188 Query 180 RVGDWAITAAGAAVTLDGQ-TILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAG 238 RVGD+AI + ++LD T+ A + + +PV + L G + + E G Sbjct 189 RVGDFAIVSTAVNLSLDYDGTVKDAGIAIGGAANNPVKVTRAENLLRGNKINDNLIKEVG 248 Query 239 RRAAQACTPVTDVRG-TAEYKRHLAGELTVRTLRTAAGRVLG 279 + + TPV + G +YK+ +AG LT+R +R + RVLG Sbjct 249 KIVTEEITPVEEPFGPPGDYKKAMAGVLTIRAIRHSLRRVLG 290 >gi|317122329|ref|YP_004102332.1| carbon monoxide dehydrogenase, medium subunit [Thermaerobacter marianensis DSM 12885] gi|315592309|gb|ADU51605.1| carbon monoxide dehydrogenase, medium subunit [Thermaerobacter marianensis DSM 12885] Length=290 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 119/279 (43%), Positives = 162/279 (59%), Gaps = 9/279 (3%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 V A+ LL R G+ A+V+AGG SL+PM++ R+ P LVDIN + EL Y G Sbjct 14 VAEAVQLLRRHGDEAKVIAGGQSLIPMLRFRLLEPALLVDINRIE-ELAYFREEG----G 68 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 +RLGA+TRH ++ + L P+ RV+ADP+VRNRGT+ GSL ADPA D Sbjct 69 FLRLGALTRHSDVEFAPGLERRYPLLVATARVVADPLVRNRGTVAGSLAHADPAGDWGAA 128 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPL-RHNTSSAYAKVER 179 A + GP G R +++DDFL+ + TAL +E+L EVR+P+ T AY K+ER Sbjct 129 LLAAGAQVVLTGPDGSRTLSVDDFLLDTFTTALGEDELLTEVRVPVPPERTGGAYLKLER 188 Query 180 RVGDWAITAAGAAVTLD--GQTILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEA 237 +VGD+AI A G VTL+ G+ A +GL V + + L+G+ TE+V AEA Sbjct 189 KVGDFAIAAVGVQVTLNAAGECTRAG-IGLCGVGSISLRARQAEEYLLGRTLTEDVLAEA 247 Query 238 GRRAAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGR 276 AA+ PV+D RG AEYKR + LT R L+ A R Sbjct 248 ASVAAEEADPVSDQRGPAEYKRDMVRVLTRRALQQAVER 286 >gi|268318303|ref|YP_003292022.1| molybdopterin dehydrogenase FAD-binding protein [Rhodothermus marinus DSM 4252] gi|345304601|ref|YP_004826503.1| carbon-monoxide dehydrogenase (acceptor) [Rhodothermus marinus SG0.5JP17-172] gi|262335837|gb|ACY49634.1| molybdopterin dehydrogenase FAD-binding protein [Rhodothermus marinus DSM 4252] gi|345113834|gb|AEN74666.1| Carbon-monoxide dehydrogenase (acceptor) [Rhodothermus marinus SG0.5JP17-172] Length=291 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 115/288 (40%), Positives = 155/288 (54%), Gaps = 21/288 (7%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDIN------DLAPELGYVVVG 54 ++ A+ LL + G A+++AGGHSLLPMMKLR+ PE L+D+ D+ E GY+ Sbjct 14 LEEALALLQQHGPMAKILAGGHSLLPMMKLRLLEPEVLIDLRRVPGLADIREENGYL--- 70 Query 55 GINNPNLVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPA 114 +GAM R E+ + + P+ + R IADP VRN GT+GG+L DP Sbjct 71 --------HIGAMVREVELEEHPLIREKYPLLHETTRWIADPQVRNMGTVGGNLAHGDPG 122 Query 115 EDLSTVCTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLRHNTS-SA 173 D DA + GP GER I +F + Y TAL +E+L +RIP S A Sbjct 123 NDHPATMMAYDAQFVVVGPRGERVIPAREFFLDFYTTALESDEILTAIRIPTPPPRSGGA 182 Query 174 YAKVERRVGDWAITAAGAAVTL--DGQTILAARVGLTAVNPDPVALAELSAGLVGQPATE 231 Y K+ER+VGD+A A ++L DG T+ +GLT V P+ A A L GQ T Sbjct 183 YEKLERKVGDYAAAAVAVQLSLAEDG-TLSYVGIGLTNVAHVPLFAARSCAHLQGQRPTP 241 Query 232 EVFAEAGRRAAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGRVLG 279 E EA R A++ C P +D+RG+AEYKR + ELT R R A R G Sbjct 242 ERIDEAARMASEDCNPRSDLRGSAEYKRAMVRELTHRAFRRALERAQG 289 >gi|315427100|dbj|BAJ48716.1| molybdopterin dehydrogenase FAD-binding [Candidatus Caldiarchaeum subterraneum] gi|315427131|dbj|BAJ48746.1| molybdopterin dehydrogenase FAD-binding [Candidatus Caldiarchaeum subterraneum] gi|343485765|dbj|BAJ51419.1| molybdopterin dehydrogenase FAD-binding [Candidatus Caldiarchaeum subterraneum] Length=291 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 108/279 (39%), Positives = 160/279 (58%), Gaps = 9/279 (3%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 V A+ LL + + A++++GG SL+PMMKLR+ +P+ ++DIN++ L Y+ GG Sbjct 14 VSEAVSLLRKYRDSAKILSGGMSLIPMMKLRVLSPQVIIDINNIK-SLNYIKDGG----K 68 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 VR+GA+ RH +I S + P+ DA IAD VRN GT G+L ADPA D Sbjct 69 TVRIGALVRHADIEHSPIIKEKFPMMADAAPHIADMQVRNLGTFLGALAHADPAADWPAS 128 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIPLR--HNTSSAYAKVE 178 LDA +A+G + +R I F GP+ETAL E+L+E +P+ AY K E Sbjct 129 ALALDAELVAQG-TAKRVIKATKFFKGPFETALKPTEMLVEAVLPVPRGEKVGQAYLKFE 187 Query 179 RRVGDWAITAAGAAVTLDGQTIL-AARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEA 237 R+ GD+AI + +TL+ + ++ A + LTAVNP P + LVGQ ++++ +A Sbjct 188 RKAGDYAIVGVASLLTLNRENVIQKAAIALTAVNPFPFRATDAEELLVGQKPSKDLIEQA 247 Query 238 GRRAAQACTPVTDVRGTAEYKRHLAGELTVRTLRTAAGR 276 + AA P +D+RG+AEYKR +A T R+L A R Sbjct 248 AKAAAAMADPSSDLRGSAEYKREMAKVFTRRSLNRALER 286 >gi|14601920|ref|NP_148465.1| aldehyde dehydrogenase, middle subunit [Aeropyrum pernix K1] gi|5105919|dbj|BAA81231.1| aldehyde dehydrogenase, middle subunit [Aeropyrum pernix K1] Length=292 Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 112/282 (40%), Positives = 164/282 (59%), Gaps = 11/282 (3%) Query 1 VDHAIGLLDRLGEGARVVAGGHSLLPMMKLRIANPEYLVDINDLAPELGYVVVGGINNPN 60 +D A+ +L++ G+ A+V+AGGHSL+PMM+LR+ P Y++ I + P L Y+ G Sbjct 14 LDEALDMLEKYGDNAKVLAGGHSLIPMMRLRLVKPTYVIYIGRI-PGLSYIREEG----G 68 Query 61 LVRLGAMTRHREILDSDALAAVCPIFRDAERVIADPVVRNRGTLGGSLCQADPAEDLSTV 120 +R+GA+T H EI +S L P+ + I D VRN GT+GGSL ADPA D Sbjct 69 EIRIGALTTHNEIEESSLLKEKNPLLSETASKIGDLQVRNMGTIGGSLAHADPAADYPAA 128 Query 121 CTVLDAVCLAKGPSGEREIAIDDFLVGPYETALAHNEVLIEVRIP-LRHNTSSAYAKVER 179 L+A + + +GER + ++DF++GPY T L +E+L+EVR+P L +AY K+ Sbjct 129 LAALEASVVLRSKAGERVVKLEDFIIGPYITDLQPSELLVEVRVPSLSGRFGTAYEKLVF 188 Query 180 RVGDWAITAAGAAVTLDGQ-TILAARVGLTAVNPDPVALAELSAGLVGQPATEEVFAEAG 238 R D+AI A V L G T RVGLT V+ PV + L G+ +E++ A A Sbjct 189 RASDFAIVGVAALVQLSGDGTAEKVRVGLTGVDEKPVRARGVEEELEGKRLSEDLIARAA 248 Query 239 RRAAQACTPVTDVRGTAEYKRHLAGELTVRTL----RTAAGR 276 RA++ P TD+R +AEY++ +A LT R L R AAG+ Sbjct 249 ERASEGINPPTDIRASAEYRKRMARALTKRALTRAFRKAAGK 290 Lambda K H 0.319 0.136 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 461491158592 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40