BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0379
Length=71
Score E
Sequences producing significant alignments: (Bits) Value
gi|294995136|ref|ZP_06800827.1| preprotein translocase subunit s... 153 9e-36
gi|31791556|ref|NP_854049.1| protein transport protein [Mycobact... 142 2e-32
gi|2149409|gb|AAB58554.1| unknown [Mycobacterium tuberculosis] 141 2e-32
gi|183980677|ref|YP_001848968.1| protein transport protein SecE2... 137 4e-31
gi|326327941|pdb|3ONR|A Chain A, Crystal Structure Of The Calciu... 137 6e-31
gi|308231536|ref|ZP_07412810.2| preprotein translocase subunit s... 136 9e-31
gi|240172152|ref|ZP_04750811.1| protein transport protein SecE2 ... 135 3e-30
gi|118616018|ref|YP_904350.1| protein transport protein SecE2 [M... 134 5e-30
gi|2149405|gb|AAB58552.1| unknown [Mycobacterium tuberculosis] 109 1e-22
gi|333990822|ref|YP_004523436.1| protein transport protein SecE2... 102 2e-20
gi|75676644|ref|YP_319065.1| hypothetical protein Nwi_2460 [Nitr... 77.4 6e-13
gi|298247528|ref|ZP_06971333.1| protein of unknown function DUF1... 77.0 8e-13
gi|92118386|ref|YP_578115.1| hypothetical protein Nham_2887 [Nit... 74.7 4e-12
gi|218778803|ref|YP_002430121.1| hypothetical protein Dalk_0950 ... 71.2 4e-11
gi|148656199|ref|YP_001276404.1| hypothetical protein RoseRS_207... 71.2 4e-11
gi|2078401|gb|AAB54027.1| unknown [Mycobacterium tuberculosis] 69.7 1e-10
gi|2078403|gb|AAB54028.1| unknown [Mycobacterium tuberculosis] 68.9 2e-10
gi|94265612|ref|ZP_01289356.1| Protein of unknown function DUF14... 68.2 4e-10
gi|156741771|ref|YP_001431900.1| hypothetical protein Rcas_1790 ... 67.4 6e-10
gi|88810417|ref|ZP_01125674.1| hypothetical protein NB231_15093 ... 66.2 2e-09
gi|224370361|ref|YP_002604525.1| hypothetical protein HRM2_32840... 64.7 4e-09
gi|82703367|ref|YP_412933.1| hypothetical protein Nmul_A2249 [Ni... 64.7 4e-09
gi|291614897|ref|YP_003525054.1| hypothetical protein Slit_2442 ... 63.9 8e-09
gi|330508936|ref|YP_004385364.1| hypothetical protein MCON_3276 ... 62.8 2e-08
gi|116749251|ref|YP_845938.1| hypothetical protein Sfum_1818 [Sy... 61.6 4e-08
gi|27380463|ref|NP_771992.1| hypothetical protein bll5352 [Brady... 60.8 5e-08
gi|158520982|ref|YP_001528852.1| hypothetical protein Dole_0965 ... 60.1 1e-07
gi|308271413|emb|CBX28021.1| hypothetical protein N47_G33450 [un... 59.7 1e-07
gi|330509001|ref|YP_004385429.1| hypothetical protein MCON_3357 ... 58.2 4e-07
gi|153003182|ref|YP_001377507.1| hypothetical protein Anae109_03... 56.6 1e-06
gi|116754596|ref|YP_843714.1| hypothetical protein Mthe_1296 [Me... 55.8 2e-06
gi|330507421|ref|YP_004383849.1| hypothetical protein MCON_1348 ... 55.1 4e-06
gi|86132026|ref|ZP_01050622.1| conserved hypothetical protein [D... 54.7 5e-06
gi|332292244|ref|YP_004430853.1| protein of unknown function DUF... 53.1 1e-05
gi|163753912|ref|ZP_02161035.1| hypothetical protein KAOT1_19857... 53.1 1e-05
gi|305665214|ref|YP_003861501.1| hypothetical protein FB2170_029... 50.8 6e-05
gi|260060627|ref|YP_003193707.1| hypothetical protein RB2501_034... 49.7 1e-04
gi|86140722|ref|ZP_01059281.1| hypothetical protein MED217_16260... 49.7 2e-04
gi|340618380|ref|YP_004736833.1| hypothetical protein zobellia_2... 47.8 5e-04
gi|154251968|ref|YP_001412792.1| hypothetical protein Plav_1516 ... 47.4 7e-04
gi|222479657|ref|YP_002565894.1| hypothetical protein Hlac_1232 ... 47.0 8e-04
gi|319953625|ref|YP_004164892.1| hypothetical protein Celal_2099... 47.0 0.001
gi|119355968|ref|YP_910612.1| hypothetical protein Cpha266_0118 ... 47.0 0.001
gi|298206806|ref|YP_003714985.1| hypothetical protein CA2559_010... 47.0 0.001
gi|344047059|gb|EGV42700.1| hypothetical protein BZARG_1961 [Biz... 46.6 0.001
gi|345017622|ref|YP_004819975.1| hypothetical protein Thewi_1268... 46.2 0.001
gi|326391065|ref|ZP_08212612.1| protein of unknown function DUF1... 46.2 0.002
gi|89900230|ref|YP_522701.1| hypothetical protein Rfer_1437 [Rho... 46.2 0.002
gi|170739564|ref|YP_001768219.1| hypothetical protein M446_1265 ... 45.8 0.002
gi|153004828|ref|YP_001379153.1| hypothetical protein Anae109_19... 45.8 0.002
>gi|294995136|ref|ZP_06800827.1| preprotein translocase subunit secE2 [Mycobacterium tuberculosis
210]
Length=135
Score = 153 bits (386), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 71/71 (100%), Positives = 71/71 (100%), Gaps = 0/71 (0%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 60
MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE
Sbjct 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 60
Query 61 VSFKMRPAQPR 71
VSFKMRPAQPR
Sbjct 61 VSFKMRPAQPR 71
>gi|31791556|ref|NP_854049.1| protein transport protein [Mycobacterium bovis AF2122/97]
gi|57116727|ref|YP_177722.1| protein transport protein [Mycobacterium tuberculosis H37Rv]
gi|121636292|ref|YP_976515.1| putative protein transport protein secE2 [Mycobacterium bovis
BCG str. Pasteur 1173P2]
60 more sequence titles
Length=71
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/71 (100%), Positives = 71/71 (100%), Gaps = 0/71 (0%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 60
MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE
Sbjct 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 60
Query 61 VSFKMRPAQPR 71
VSFKMRPAQPR
Sbjct 61 VSFKMRPAQPR 71
>gi|2149409|gb|AAB58554.1| unknown [Mycobacterium tuberculosis]
Length=116
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/71 (99%), Positives = 70/71 (99%), Gaps = 0/71 (0%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 60
MSVYKVIDIIGTSPTSWEQAAAEAV RARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE
Sbjct 46 MSVYKVIDIIGTSPTSWEQAAAEAVHRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 105
Query 61 VSFKMRPAQPR 71
VSFKMRPAQPR
Sbjct 106 VSFKMRPAQPR 116
>gi|183980677|ref|YP_001848968.1| protein transport protein SecE2 [Mycobacterium marinum M]
gi|183174003|gb|ACC39113.1| protein transport protein SecE2 [Mycobacterium marinum M]
Length=71
Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/71 (95%), Positives = 71/71 (100%), Gaps = 0/71 (0%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 60
MSVYKVIDIIGTSPTSWEQAAAEAVQRAR+SVDDIRVARVIEQDMAVDS+GKITYRIKLE
Sbjct 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARESVDDIRVARVIEQDMAVDSSGKITYRIKLE 60
Query 61 VSFKMRPAQPR 71
+SFKMRP+QPR
Sbjct 61 ISFKMRPSQPR 71
>gi|326327941|pdb|3ONR|A Chain A, Crystal Structure Of The Calcium Chelating Immunodominant
Antigen, Calcium Dodecin (Rv0379),From Mycobacterium Tuberculosis
With A Novel Calcium-Binding Site
gi|326327942|pdb|3ONR|B Chain B, Crystal Structure Of The Calcium Chelating Immunodominant
Antigen, Calcium Dodecin (Rv0379),From Mycobacterium Tuberculosis
With A Novel Calcium-Binding Site
gi|326327943|pdb|3ONR|C Chain C, Crystal Structure Of The Calcium Chelating Immunodominant
Antigen, Calcium Dodecin (Rv0379),From Mycobacterium Tuberculosis
With A Novel Calcium-Binding Site
9 more sequence titles
gi|326327944|pdb|3ONR|D Chain D, Crystal Structure Of The Calcium Chelating Immunodominant
Antigen, Calcium Dodecin (Rv0379),From Mycobacterium Tuberculosis
With A Novel Calcium-Binding Site
gi|326327945|pdb|3ONR|E Chain E, Crystal Structure Of The Calcium Chelating Immunodominant
Antigen, Calcium Dodecin (Rv0379),From Mycobacterium Tuberculosis
With A Novel Calcium-Binding Site
gi|326327946|pdb|3ONR|F Chain F, Crystal Structure Of The Calcium Chelating Immunodominant
Antigen, Calcium Dodecin (Rv0379),From Mycobacterium Tuberculosis
With A Novel Calcium-Binding Site
gi|326327947|pdb|3ONR|G Chain G, Crystal Structure Of The Calcium Chelating Immunodominant
Antigen, Calcium Dodecin (Rv0379),From Mycobacterium Tuberculosis
With A Novel Calcium-Binding Site
gi|326327948|pdb|3ONR|H Chain H, Crystal Structure Of The Calcium Chelating Immunodominant
Antigen, Calcium Dodecin (Rv0379),From Mycobacterium Tuberculosis
With A Novel Calcium-Binding Site
gi|326327949|pdb|3ONR|I Chain I, Crystal Structure Of The Calcium Chelating Immunodominant
Antigen, Calcium Dodecin (Rv0379),From Mycobacterium Tuberculosis
With A Novel Calcium-Binding Site
gi|326327950|pdb|3ONR|J Chain J, Crystal Structure Of The Calcium Chelating Immunodominant
Antigen, Calcium Dodecin (Rv0379),From Mycobacterium Tuberculosis
With A Novel Calcium-Binding Site
gi|326327951|pdb|3ONR|K Chain K, Crystal Structure Of The Calcium Chelating Immunodominant
Antigen, Calcium Dodecin (Rv0379),From Mycobacterium Tuberculosis
With A Novel Calcium-Binding Site
gi|326327952|pdb|3ONR|L Chain L, Crystal Structure Of The Calcium Chelating Immunodominant
Antigen, Calcium Dodecin (Rv0379),From Mycobacterium Tuberculosis
With A Novel Calcium-Binding Site
Length=72
Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/70 (98%), Positives = 70/70 (100%), Gaps = 0/70 (0%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 60
+SVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE
Sbjct 2 VSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 61
Query 61 VSFKMRPAQP 70
VSFKMRP+QP
Sbjct 62 VSFKMRPSQP 71
>gi|308231536|ref|ZP_07412810.2| preprotein translocase subunit secE2 [Mycobacterium tuberculosis
SUMu001]
gi|308372876|ref|ZP_07430229.2| preprotein translocase subunit secE2 [Mycobacterium tuberculosis
SUMu005]
gi|308377408|ref|ZP_07479042.2| preprotein translocase subunit secE2 [Mycobacterium tuberculosis
SUMu009]
7 more sequence titles
Length=69
Score = 136 bits (343), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 68/69 (99%), Positives = 69/69 (100%), Gaps = 0/69 (0%)
Query 3 VYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEVS 62
+YKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEVS
Sbjct 1 MYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEVS 60
Query 63 FKMRPAQPR 71
FKMRPAQPR
Sbjct 61 FKMRPAQPR 69
>gi|240172152|ref|ZP_04750811.1| protein transport protein SecE2 [Mycobacterium kansasii ATCC
12478]
Length=72
Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/71 (92%), Positives = 71/71 (100%), Gaps = 0/71 (0%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 60
MSVYKVIDIIGTSPTSWEQAAAEAVQRAR+SVDDIRVARVIEQDM+VDS+GKIT+RIKLE
Sbjct 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARESVDDIRVARVIEQDMSVDSSGKITFRIKLE 60
Query 61 VSFKMRPAQPR 71
+SFKMRPA+PR
Sbjct 61 ISFKMRPAKPR 71
>gi|118616018|ref|YP_904350.1| protein transport protein SecE2 [Mycobacterium ulcerans Agy99]
gi|118568128|gb|ABL02879.1| protein transport protein SecE2 [Mycobacterium ulcerans Agy99]
Length=71
Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/71 (93%), Positives = 70/71 (99%), Gaps = 0/71 (0%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 60
MSVYKVIDIIGTSPTSWEQAAAEAVQRAR+SVDDIRVARVIEQDMAVDS+ KITYRIKLE
Sbjct 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARESVDDIRVARVIEQDMAVDSSVKITYRIKLE 60
Query 61 VSFKMRPAQPR 71
+SFKMRP+QPR
Sbjct 61 ISFKMRPSQPR 71
>gi|2149405|gb|AAB58552.1| unknown [Mycobacterium tuberculosis]
Length=65
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/64 (86%), Positives = 57/64 (90%), Gaps = 0/64 (0%)
Query 7 IDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEVSFKMR 66
IDIIGTSPTSWEQAAAEAV RARD V DIRVARVIEQDMAVDSAG ITYRIKL+ FK+
Sbjct 1 IDIIGTSPTSWEQAAAEAVHRARDIVYDIRVARVIEQDMAVDSAGNITYRIKLQSVFKIM 60
Query 67 PAQP 70
PAQP
Sbjct 61 PAQP 64
>gi|333990822|ref|YP_004523436.1| protein transport protein SecE2 [Mycobacterium sp. JDM601]
gi|333486790|gb|AEF36182.1| protein transport protein SecE2 [Mycobacterium sp. JDM601]
Length=75
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/72 (67%), Positives = 60/72 (84%), Gaps = 1/72 (1%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 60
MSVY+VIDIIGTSP+SWE AAAEAV RA+ ++DDIRVA+V+EQD+ +D G I YR KL
Sbjct 1 MSVYRVIDIIGTSPSSWENAAAEAVHRAKQTIDDIRVAQVVEQDLTLDDKGGIIYRTKLR 60
Query 61 VSFKMRPAQ-PR 71
+SFK+RP + PR
Sbjct 61 ISFKIRPPKSPR 72
>gi|75676644|ref|YP_319065.1| hypothetical protein Nwi_2460 [Nitrobacter winogradskyi Nb-255]
gi|74421514|gb|ABA05713.1| Protein of unknown function DUF1458 [Nitrobacter winogradskyi
Nb-255]
Length=70
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/65 (59%), Positives = 51/65 (79%), Gaps = 1/65 (1%)
Query 2 SVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKI-TYRIKLE 60
SVYKVI++IGTS SWE+AA AV+RA +S+ D+RVA +++ DM +D GK+ TYR KL+
Sbjct 4 SVYKVIELIGTSKDSWEKAAKGAVERAGESLRDLRVAEIVKLDMQLDEEGKVETYRAKLK 63
Query 61 VSFKM 65
VSFK
Sbjct 64 VSFKF 68
>gi|298247528|ref|ZP_06971333.1| protein of unknown function DUF1458 [Ktedonobacter racemifer
DSM 44963]
gi|297550187|gb|EFH84053.1| protein of unknown function DUF1458 [Ktedonobacter racemifer
DSM 44963]
Length=71
Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/63 (51%), Positives = 50/63 (80%), Gaps = 0/63 (0%)
Query 2 SVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEV 61
SVYKVI ++GTS SWE+AAA +++A ++ D+RVAR++EQD+ ++ +TYR+K+E+
Sbjct 4 SVYKVIQLVGTSNESWEKAAAATIEQASQTLRDLRVARIVEQDIHIEPGKSLTYRVKMEL 63
Query 62 SFK 64
SFK
Sbjct 64 SFK 66
>gi|92118386|ref|YP_578115.1| hypothetical protein Nham_2887 [Nitrobacter hamburgensis X14]
gi|91801280|gb|ABE63655.1| protein of unknown function DUF1458 [Nitrobacter hamburgensis
X14]
Length=70
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/65 (59%), Positives = 49/65 (76%), Gaps = 1/65 (1%)
Query 2 SVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKI-TYRIKLE 60
SVYKVI++IGTS SWE+AA AV+RA S+ D+RVA V++ DM +D GK+ YR KL+
Sbjct 4 SVYKVIELIGTSKESWEKAATTAVERAGQSLRDLRVAEVVKLDMQLDDEGKVEAYRAKLK 63
Query 61 VSFKM 65
VSFK
Sbjct 64 VSFKF 68
>gi|218778803|ref|YP_002430121.1| hypothetical protein Dalk_0950 [Desulfatibacillum alkenivorans
AK-01]
gi|218760187|gb|ACL02653.1| protein of unknown function DUF1458 [Desulfatibacillum alkenivorans
AK-01]
Length=67
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/65 (56%), Positives = 50/65 (77%), Gaps = 2/65 (3%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKIT-YRIKL 59
MSVYK+I+++G+SPTSWE+AA AV+ A S+ D+RVA V E D+ ++ GK+T YR K+
Sbjct 1 MSVYKIIELVGSSPTSWEEAAKLAVETASQSLKDLRVAEVKELDLKIED-GKVTAYRAKV 59
Query 60 EVSFK 64
VSFK
Sbjct 60 SVSFK 64
>gi|148656199|ref|YP_001276404.1| hypothetical protein RoseRS_2071 [Roseiflexus sp. RS-1]
gi|148568309|gb|ABQ90454.1| protein of unknown function DUF1458 [Roseiflexus sp. RS-1]
Length=71
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/63 (48%), Positives = 45/63 (72%), Gaps = 0/63 (0%)
Query 2 SVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEV 61
SVYKVI+++GTSP SWE+AAA A++ A + D+RV V++ D+ ++ + YR KL +
Sbjct 4 SVYKVIELVGTSPESWEKAAANAIETASRHLQDLRVGEVVQMDIHLEDGKNLVYRTKLRL 63
Query 62 SFK 64
SFK
Sbjct 64 SFK 66
>gi|2078401|gb|AAB54027.1| unknown [Mycobacterium tuberculosis]
Length=110
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/47 (96%), Positives = 45/47 (96%), Gaps = 0/47 (0%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAV 47
MSVYKVIDIIGTSPTSWEQAAAEAVQ ARDSV DIRVARVIEQDMAV
Sbjct 48 MSVYKVIDIIGTSPTSWEQAAAEAVQXARDSVHDIRVARVIEQDMAV 94
>gi|2078403|gb|AAB54028.1| unknown [Mycobacterium tuberculosis]
Length=96
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/41 (86%), Positives = 37/41 (91%), Gaps = 0/41 (0%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVI 41
+SVYKVIDII TSPTSWEQAAAEAVQ ARDSV +IRV RVI
Sbjct 56 LSVYKVIDIIRTSPTSWEQAAAEAVQPARDSVYNIRVPRVI 96
>gi|94265612|ref|ZP_01289356.1| Protein of unknown function DUF1458 [delta proteobacterium MLMS-1]
gi|94266759|ref|ZP_01290427.1| Protein of unknown function DUF1458 [delta proteobacterium MLMS-1]
gi|93452581|gb|EAT03158.1| Protein of unknown function DUF1458 [delta proteobacterium MLMS-1]
gi|93453891|gb|EAT04249.1| Protein of unknown function DUF1458 [delta proteobacterium MLMS-1]
Length=70
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/67 (44%), Positives = 47/67 (71%), Gaps = 0/67 (0%)
Query 2 SVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEV 61
SVYK+I+++GTSP SWE+AA AV+ A +S+ ++RV + + DM +D + YR ++ V
Sbjct 4 SVYKIIELVGTSPNSWEEAAKNAVETAGESLKELRVGEITKLDMKMDDGKIVAYRARVSV 63
Query 62 SFKMRPA 68
SFK + +
Sbjct 64 SFKYQKS 70
>gi|156741771|ref|YP_001431900.1| hypothetical protein Rcas_1790 [Roseiflexus castenholzii DSM
13941]
gi|156233099|gb|ABU57882.1| protein of unknown function DUF1458 [Roseiflexus castenholzii
DSM 13941]
Length=70
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/66 (49%), Positives = 45/66 (69%), Gaps = 1/66 (1%)
Query 2 SVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEV 61
SVYK+I+++GTS SWE+AA A++ A + D+RV V E D+ ++ GKI YR KL+V
Sbjct 4 SVYKIIELVGTSAESWEKAAVNAIETASRHLKDLRVGEVAEMDIHLED-GKIMYRTKLKV 62
Query 62 SFKMRP 67
SFK
Sbjct 63 SFKYHE 68
>gi|88810417|ref|ZP_01125674.1| hypothetical protein NB231_15093 [Nitrococcus mobilis Nb-231]
gi|88792047|gb|EAR23157.1| hypothetical protein NB231_15093 [Nitrococcus mobilis Nb-231]
Length=72
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/68 (48%), Positives = 46/68 (68%), Gaps = 1/68 (1%)
Query 2 SVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKI-TYRIKLE 60
S YKV+++IGTS SWE+AA AV+ A S+ +R+A V E DM V + G++ +YR K+
Sbjct 4 SAYKVVEVIGTSENSWEEAARNAVETAAQSLKHMRIAEVKELDMTVGADGRVMSYRAKMS 63
Query 61 VSFKMRPA 68
+SFK P
Sbjct 64 LSFKYVPG 71
>gi|224370361|ref|YP_002604525.1| hypothetical protein HRM2_32840 [Desulfobacterium autotrophicum
HRM2]
gi|223693078|gb|ACN16361.1| hypothetical protein HRM2_32840 [Desulfobacterium autotrophicum
HRM2]
Length=69
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (69%), Gaps = 0/64 (0%)
Query 2 SVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEV 61
SVYK+I+++G S SWE AA A+ +SV DIRVA VI DM +++ + YR KL+V
Sbjct 4 SVYKIIEVVGMSEKSWEDAAKAAIATVDNSVRDIRVAEVIMMDMRLEANRIVAYRTKLKV 63
Query 62 SFKM 65
SFK+
Sbjct 64 SFKL 67
>gi|82703367|ref|YP_412933.1| hypothetical protein Nmul_A2249 [Nitrosospira multiformis ATCC
25196]
gi|82411432|gb|ABB75541.1| Protein of unknown function DUF1458 [Nitrosospira multiformis
ATCC 25196]
Length=72
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/68 (43%), Positives = 45/68 (67%), Gaps = 0/68 (0%)
Query 2 SVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEV 61
SVYK+ +IIGTS TSWE AA AV+ A ++ D+RVA +++ D+ V+ + YR ++ +
Sbjct 5 SVYKITEIIGTSTTSWEDAAKNAVETASKTLRDLRVAEIVKLDLVVEDGKVVAYRARVNL 64
Query 62 SFKMRPAQ 69
SFK +
Sbjct 65 SFKYESGK 72
>gi|291614897|ref|YP_003525054.1| hypothetical protein Slit_2442 [Sideroxydans lithotrophicus ES-1]
gi|291585009|gb|ADE12667.1| protein of unknown function DUF1458 [Sideroxydans lithotrophicus
ES-1]
Length=72
Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/68 (46%), Positives = 45/68 (67%), Gaps = 0/68 (0%)
Query 2 SVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEV 61
SVY++ +I+GTS SWE AA+ AV+ A ++ D+RVA VI+ DM V+ YR K+ +
Sbjct 5 SVYRITEIVGTSKKSWEDAASNAVKAASQTLRDLRVAEVIKLDMVVEGGKVAAYRAKVAL 64
Query 62 SFKMRPAQ 69
SFK P +
Sbjct 65 SFKYDPKK 72
>gi|330508936|ref|YP_004385364.1| hypothetical protein MCON_3276 [Methanosaeta concilii GP6]
gi|328929744|gb|AEB69546.1| Protein of unknown function (DUF1458) [Methanosaeta concilii
GP6]
Length=90
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 42/64 (66%), Gaps = 1/64 (1%)
Query 2 SVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGK-ITYRIKLE 60
SVY+ I+++G+SP WE AA A+ A S+ ++R+ARV E D +D G I YRIKL
Sbjct 5 SVYRAIELVGSSPIGWEDAAKNAIDTAHKSIWNLRIARVAELDAKLDEKGNIILYRIKLR 64
Query 61 VSFK 64
+S K
Sbjct 65 ISLK 68
>gi|116749251|ref|YP_845938.1| hypothetical protein Sfum_1818 [Syntrophobacter fumaroxidans
MPOB]
gi|116698315|gb|ABK17503.1| protein of unknown function DUF1458 [Syntrophobacter fumaroxidans
MPOB]
Length=71
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/66 (43%), Positives = 44/66 (67%), Gaps = 0/66 (0%)
Query 2 SVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEV 61
S+YKVI+++GTS SWE AA + + A ++ D+R+A V + D+ V++ I YR +L+V
Sbjct 4 SIYKVIELVGTSTVSWEDAAKKVIDTASKTLKDLRIAEVSKLDVKVENGKVIAYRARLQV 63
Query 62 SFKMRP 67
SFK
Sbjct 64 SFKYHS 69
>gi|27380463|ref|NP_771992.1| hypothetical protein bll5352 [Bradyrhizobium japonicum USDA 110]
gi|27353627|dbj|BAC50617.1| bll5352 [Bradyrhizobium japonicum USDA 110]
Length=247
Score = 60.8 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/64 (58%), Positives = 50/64 (79%), Gaps = 1/64 (1%)
Query 2 SVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKI-TYRIKLE 60
SVYKVI++IGTS SWE+AAA AV++A S+ D+RVA V++ D+ +D+ GK+ YR KL
Sbjct 180 SVYKVIELIGTSNDSWEKAAANAVEQAAKSLRDLRVAEVVKLDIQLDAKGKVEAYRAKLN 239
Query 61 VSFK 64
VSFK
Sbjct 240 VSFK 243
>gi|158520982|ref|YP_001528852.1| hypothetical protein Dole_0965 [Desulfococcus oleovorans Hxd3]
gi|158509808|gb|ABW66775.1| protein of unknown function DUF1458 [Desulfococcus oleovorans
Hxd3]
Length=70
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/65 (44%), Positives = 43/65 (67%), Gaps = 0/65 (0%)
Query 2 SVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEV 61
SVYK+I+++GTS SWE AA AV +A S+ D+R+A V + D+ ++ + YR + V
Sbjct 4 SVYKIINLVGTSDKSWEDAAKAAVDQAGKSLQDLRIAEVEKLDLKLEDGKVVAYRANVRV 63
Query 62 SFKMR 66
SFK +
Sbjct 64 SFKYK 68
>gi|308271413|emb|CBX28021.1| hypothetical protein N47_G33450 [uncultured Desulfobacterium
sp.]
Length=71
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (40%), Positives = 44/68 (65%), Gaps = 0/68 (0%)
Query 2 SVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEV 61
SVYK+I+++GTS SWE+AA AV A S+ ++R+A + + DM ++ YR +++V
Sbjct 4 SVYKIIELVGTSTKSWEEAAKSAVDMASKSLRELRIAEITKLDMKLEDGKIAAYRARVQV 63
Query 62 SFKMRPAQ 69
SFK +
Sbjct 64 SFKYEAGK 71
>gi|330509001|ref|YP_004385429.1| hypothetical protein MCON_3357 [Methanosaeta concilii GP6]
gi|328929809|gb|AEB69611.1| Protein of unknown function (DUF1458) [Methanosaeta concilii
GP6]
Length=75
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/62 (47%), Positives = 41/62 (67%), Gaps = 0/62 (0%)
Query 3 VYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEVS 62
VYKVI+++GTS TSWE A V RA ++ D+R+A V E D+ +D+ YR K+ +S
Sbjct 8 VYKVIELVGTSTTSWEDAVKTVVDRATKTLRDLRIAEVKELDVRLDNGKIAEYRAKVCLS 67
Query 63 FK 64
FK
Sbjct 68 FK 69
>gi|153003182|ref|YP_001377507.1| hypothetical protein Anae109_0307 [Anaeromyxobacter sp. Fw109-5]
gi|152026755|gb|ABS24523.1| protein of unknown function DUF1458 [Anaeromyxobacter sp. Fw109-5]
Length=69
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/64 (49%), Positives = 44/64 (69%), Gaps = 0/64 (0%)
Query 2 SVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEV 61
S+YKVI+++G+SP SWE+AA AV+ A S+ D+RVA V D+ +D YR KL++
Sbjct 4 SIYKVIEVVGSSPESWEKAAQAAVEAASKSLRDLRVAEVSALDIHLDGGKIAAYRTKLKL 63
Query 62 SFKM 65
SFK
Sbjct 64 SFKF 67
>gi|116754596|ref|YP_843714.1| hypothetical protein Mthe_1296 [Methanosaeta thermophila PT]
gi|116666047|gb|ABK15074.1| protein of unknown function DUF1458 [Methanosaeta thermophila
PT]
Length=82
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/62 (42%), Positives = 39/62 (63%), Gaps = 0/62 (0%)
Query 3 VYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEVS 62
VYK I+++GTS WE A V+ A ++ D+RVA V E D+ +D + YR K+++S
Sbjct 15 VYKFIELVGTSTVGWEDAVKTVVETASKTLRDLRVAEVTELDVRLDKGKIVEYRAKVKLS 74
Query 63 FK 64
FK
Sbjct 75 FK 76
>gi|330507421|ref|YP_004383849.1| hypothetical protein MCON_1348 [Methanosaeta concilii GP6]
gi|328928229|gb|AEB68031.1| Protein of unknown function (DUF1458) [Methanosaeta concilii
GP6]
Length=78
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/63 (39%), Positives = 37/63 (59%), Gaps = 0/63 (0%)
Query 2 SVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEV 61
SVY ID++GTS SWE A A+ A + ++R+A V D + G + YR+++ +
Sbjct 8 SVYNFIDLVGTSNESWEDAVQSAINTANRKLTNVRIAEVTRMDTRLREGGIMEYRVRVTL 67
Query 62 SFK 64
SFK
Sbjct 68 SFK 70
>gi|86132026|ref|ZP_01050622.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
gi|85817360|gb|EAQ38540.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
Length=67
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/67 (39%), Positives = 43/67 (65%), Gaps = 1/67 (1%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKIT-YRIKL 59
M+V KVI+++ +S SWE AA A++ A S+ +IR V EQ+ V GKI YR+
Sbjct 1 MAVLKVIEVLASSEKSWENAAENALKHASKSLKNIRSLYVNEQNCVVGEDGKIKEYRMNC 60
Query 60 EVSFKMR 66
+++F+++
Sbjct 61 KITFEVK 67
>gi|332292244|ref|YP_004430853.1| protein of unknown function DUF1458 [Krokinobacter diaphorus
4H-3-7-5]
gi|332170330|gb|AEE19585.1| protein of unknown function DUF1458 [Krokinobacter sp. 4H-3-7-5]
Length=67
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (38%), Positives = 43/67 (65%), Gaps = 1/67 (1%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKIT-YRIKL 59
M+V KVI+++ +S SWE AA A++ A S+ +I+ V EQ+ V GKI YR+
Sbjct 1 MAVLKVIEVLASSEKSWENAAENALKHASKSIKNIKSLYVNEQNCVVGDDGKIKEYRMNC 60
Query 60 EVSFKMR 66
+++F+++
Sbjct 61 KITFEVK 67
>gi|163753912|ref|ZP_02161035.1| hypothetical protein KAOT1_19857 [Kordia algicida OT-1]
gi|161326126|gb|EDP97452.1| hypothetical protein KAOT1_19857 [Kordia algicida OT-1]
Length=66
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (40%), Positives = 42/66 (64%), Gaps = 0/66 (0%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 60
M+V KVI+++ S SWE A A+AV++A SV +IR V EQ V+ YR+ L+
Sbjct 1 MAVLKVIEVLSNSKKSWEDATAKAVKQASKSVKNIRSVYVQEQSAIVNGDAVTEYRVNLK 60
Query 61 VSFKMR 66
++F+++
Sbjct 61 LTFEVK 66
>gi|305665214|ref|YP_003861501.1| hypothetical protein FB2170_02910 [Maribacter sp. HTCC2170]
gi|88709967|gb|EAR02199.1| hypothetical protein FB2170_02910 [Maribacter sp. HTCC2170]
Length=66
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/66 (38%), Positives = 40/66 (61%), Gaps = 0/66 (0%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 60
MSV KVI+++ S SWE AA AV++A SV +IR + EQ V YR+ ++
Sbjct 1 MSVLKVIEVLANSDKSWEDAAQTAVEQASKSVKNIRSVYINEQSATVKDGKMDNYRVNVK 60
Query 61 VSFKMR 66
++F+++
Sbjct 61 ITFEVK 66
>gi|260060627|ref|YP_003193707.1| hypothetical protein RB2501_03490 [Robiginitalea biformata HTCC2501]
gi|88784757|gb|EAR15926.1| hypothetical protein RB2501_03490 [Robiginitalea biformata HTCC2501]
Length=66
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/66 (37%), Positives = 40/66 (61%), Gaps = 0/66 (0%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 60
M+V KVI+++ S SWE AA +A+ +A SVD IR + EQ V +YR+ +
Sbjct 1 MAVLKVIEVLANSDKSWEDAAEKALAQASKSVDHIRSIYINEQSCTVKDGKIASYRVNTK 60
Query 61 VSFKMR 66
++F+++
Sbjct 61 ITFEVK 66
>gi|86140722|ref|ZP_01059281.1| hypothetical protein MED217_16260 [Leeuwenhoekiella blandensis
MED217]
gi|85832664|gb|EAQ51113.1| hypothetical protein MED217_16260 [Leeuwenhoekiella blandensis
MED217]
Length=66
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/66 (35%), Positives = 41/66 (63%), Gaps = 0/66 (0%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 60
M+V KVI+++ +S SWEQA A AV+ A ++ +IR V EQ V +R+ ++
Sbjct 1 MAVLKVIEVLASSNKSWEQATANAVKEASKTIKNIRSVYVNEQSAVVTGDTVSEFRVNVK 60
Query 61 VSFKMR 66
++F+++
Sbjct 61 ITFEVK 66
>gi|340618380|ref|YP_004736833.1| hypothetical protein zobellia_2399 [Zobellia galactanivorans]
gi|339733177|emb|CAZ96552.1| Conserved hypothetical protein [Zobellia galactanivorans]
Length=66
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/66 (34%), Positives = 40/66 (61%), Gaps = 0/66 (0%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 60
M+V KVI+++ S WE AA +AV++A SV +I+ + EQ V YR+ ++
Sbjct 1 MAVLKVIEVLANSDKGWEDAAKQAVEQASKSVKNIKSVYINEQSATVKDGKLDNYRVNVK 60
Query 61 VSFKMR 66
++F+++
Sbjct 61 ITFEVK 66
>gi|154251968|ref|YP_001412792.1| hypothetical protein Plav_1516 [Parvibaculum lavamentivorans
DS-1]
gi|154155918|gb|ABS63135.1| protein of unknown function DUF1458 [Parvibaculum lavamentivorans
DS-1]
Length=68
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/63 (35%), Positives = 41/63 (66%), Gaps = 0/63 (0%)
Query 3 VYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEVS 62
VYKV++I+G+SP E A + AV++A S+ ++R V+E ++ + Y++KL+V+
Sbjct 5 VYKVVEIVGSSPKGIEDAISNAVEKAGKSLRELRWFEVVETRGHIEGSKVGHYQVKLKVA 64
Query 63 FKM 65
F +
Sbjct 65 FTL 67
>gi|222479657|ref|YP_002565894.1| hypothetical protein Hlac_1232 [Halorubrum lacusprofundi ATCC
49239]
gi|222452559|gb|ACM56824.1| protein of unknown function DUF1458 [Halorubrum lacusprofundi
ATCC 49239]
Length=74
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/62 (36%), Positives = 35/62 (57%), Gaps = 0/62 (0%)
Query 5 KVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEVSFK 64
K I++IG SP SWE AA A+ A +++DIR + Q V+ Y+ L V+F+
Sbjct 11 KTIELIGNSPKSWEDAAQNALDEANKTIEDIRGVEIESQTANVEDGQIERYKTTLHVAFE 70
Query 65 MR 66
++
Sbjct 71 LQ 72
>gi|319953625|ref|YP_004164892.1| hypothetical protein Celal_2099 [Cellulophaga algicola DSM 14237]
gi|319422285|gb|ADV49394.1| protein of unknown function DUF1458 [Cellulophaga algicola DSM
14237]
Length=66
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/66 (34%), Positives = 41/66 (63%), Gaps = 0/66 (0%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 60
M++ KVI+++ S SWE A +AV +A SV +IR V EQ +V+ +R+ ++
Sbjct 1 MAILKVIEVLANSEKSWEDATRKAVSQASKSVKNIRSVYVNEQSASVEDGDVKEFRVNVK 60
Query 61 VSFKMR 66
++F+++
Sbjct 61 ITFEIK 66
>gi|119355968|ref|YP_910612.1| hypothetical protein Cpha266_0118 [Chlorobium phaeobacteroides
DSM 266]
gi|119353317|gb|ABL64188.1| protein of unknown function DUF1458 [Chlorobium phaeobacteroides
DSM 266]
Length=70
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/63 (29%), Positives = 42/63 (67%), Gaps = 0/63 (0%)
Query 3 VYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEVS 62
+YK I+++G+SPTS E+A A+++A +S+ +IR ++E V++ + +++ +++
Sbjct 5 IYKKIELVGSSPTSIEEAVNNAIEKASESIRNIRWVEILETRCHVENQKLMYWQVTVKIG 64
Query 63 FKM 65
F +
Sbjct 65 FTL 67
>gi|298206806|ref|YP_003714985.1| hypothetical protein CA2559_01085 [Croceibacter atlanticus HTCC2559]
gi|83849438|gb|EAP87306.1| hypothetical protein CA2559_01085 [Croceibacter atlanticus HTCC2559]
Length=66
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/65 (37%), Positives = 39/65 (60%), Gaps = 0/65 (0%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 60
MSV KVI+++ S SWE AA +AV+ A SV +IR + EQ+ V +R+ +
Sbjct 1 MSVLKVIEVLANSDKSWEDAARKAVKHAGKSVKNIRSVYINEQNAVVKGDEITEFRVNAK 60
Query 61 VSFKM 65
++F++
Sbjct 61 ITFEV 65
>gi|344047059|gb|EGV42700.1| hypothetical protein BZARG_1961 [Bizionia argentinensis JUB59]
Length=66
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/65 (33%), Positives = 39/65 (60%), Gaps = 0/65 (0%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 60
M++ KVI+++ S SWE A +AV+ A +V +IR + EQ V+ +R+ L+
Sbjct 1 MAILKVIEVLANSEKSWEDATRKAVKEASKTVKNIRSVYIKEQSAIVNGDNVTEFRVNLK 60
Query 61 VSFKM 65
++F++
Sbjct 61 ITFEV 65
>gi|345017622|ref|YP_004819975.1| hypothetical protein Thewi_1268 [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344032965|gb|AEM78691.1| protein of unknown function DUF1458 [Thermoanaerobacter wiegelii
Rt8.B1]
Length=119
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (32%), Positives = 39/64 (61%), Gaps = 0/64 (0%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 60
M+V KV++++G S SWE A +AV+ A S+D+I +I Q V + + Y+ ++
Sbjct 50 MAVVKVLNVVGDSTVSWEDAIHKAVEEAAKSIDNISGIEIINQTANVKNGKIVEYKANIQ 109
Query 61 VSFK 64
++++
Sbjct 110 IAYR 113
>gi|326391065|ref|ZP_08212612.1| protein of unknown function DUF1458 [Thermoanaerobacter ethanolicus
JW 200]
gi|325992850|gb|EGD51295.1| protein of unknown function DUF1458 [Thermoanaerobacter ethanolicus
JW 200]
Length=119
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (32%), Positives = 39/64 (61%), Gaps = 0/64 (0%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 60
M+V KV++++G S SWE A +AV+ A S+D+I V+ Q V + + Y+ ++
Sbjct 50 MAVVKVLNVVGDSTVSWEDAIHKAVEEAAKSIDNISGIEVVNQTANVKNGKIVEYKANIQ 109
Query 61 VSFK 64
++++
Sbjct 110 IAYR 113
>gi|89900230|ref|YP_522701.1| hypothetical protein Rfer_1437 [Rhodoferax ferrireducens T118]
gi|89344967|gb|ABD69170.1| protein of unknown function DUF1458 [Rhodoferax ferrireducens
T118]
Length=69
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (37%), Positives = 40/63 (64%), Gaps = 0/63 (0%)
Query 1 MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLE 60
MSV KVI++ TS S+E A + + RA D+V ++R A + EQ ++++ YR+ ++
Sbjct 1 MSVAKVIEVSATSKISFEDAINQGITRACDTVSNVRGAWIKEQKVSIEDGRISAYRVNMQ 60
Query 61 VSF 63
V+F
Sbjct 61 VTF 63
>gi|170739564|ref|YP_001768219.1| hypothetical protein M446_1265 [Methylobacterium sp. 4-46]
gi|168193838|gb|ACA15785.1| protein of unknown function DUF1458 [Methylobacterium sp. 4-46]
Length=70
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/66 (34%), Positives = 39/66 (60%), Gaps = 0/66 (0%)
Query 3 VYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEVS 62
+YKVI+++G+S S E A +A++RA +V ++R V+E ++ Y++ L+V
Sbjct 5 IYKVIELVGSSKVSIEDAIQQAIERASQTVRNLRWFEVLETRGQIEGGKVQHYQVTLKVG 64
Query 63 FKMRPA 68
F M A
Sbjct 65 FTMEKA 70
>gi|153004828|ref|YP_001379153.1| hypothetical protein Anae109_1966 [Anaeromyxobacter sp. Fw109-5]
gi|152028401|gb|ABS26169.1| protein of unknown function DUF1458 [Anaeromyxobacter sp. Fw109-5]
Length=67
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (39%), Positives = 42/65 (65%), Gaps = 2/65 (3%)
Query 2 SVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKIT-YRIKLE 60
+YK I+I+GTSPTS+ +A AV++A S+ + V+EQ A+ GK++ +++ L
Sbjct 3 GIYKKIEIVGTSPTSFAEATRMAVEQASKSIRHMAWFEVVEQRGAIKD-GKVSEFQVTLR 61
Query 61 VSFKM 65
V FK+
Sbjct 62 VGFKL 66
Lambda K H
0.318 0.129 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 127819123992
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40