BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0380c
Length=183
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607521|ref|NP_214894.1| RNA methyltransferase [Mycobacteriu... 366 1e-99
gi|148660146|ref|YP_001281669.1| RNA methyltransferase [Mycobact... 365 1e-99
gi|289552629|ref|ZP_06441839.1| RNA methyltransferase [Mycobacte... 365 1e-99
gi|254549323|ref|ZP_05139770.1| RNA methyltransferase [Mycobacte... 365 2e-99
gi|289756447|ref|ZP_06515825.1| RNA methyltransferase [Mycobacte... 363 5e-99
gi|289445918|ref|ZP_06435662.1| RNA methyltransferase [Mycobacte... 363 5e-99
gi|254363345|ref|ZP_04979391.1| hypothetical RNA methyltransfera... 362 9e-99
gi|289744077|ref|ZP_06503455.1| RNA methyltransferase [Mycobacte... 361 2e-98
gi|294995137|ref|ZP_06800828.1| putative RNA methyltransferase [... 358 1e-97
gi|289568293|ref|ZP_06448520.1| RNA methyltransferase [Mycobacte... 346 8e-94
gi|254777225|ref|ZP_05218741.1| spou rRNA methylase family prote... 340 4e-92
gi|118462459|ref|YP_883915.1| spou rRNA methylase [Mycobacterium... 340 7e-92
gi|336460401|gb|EGO39301.1| rRNA methylase [Mycobacterium avium ... 339 1e-91
gi|41409957|ref|NP_962793.1| hypothetical protein MAP3859 [Mycob... 339 1e-91
gi|254822868|ref|ZP_05227869.1| hypothetical protein MintA_23264... 337 4e-91
gi|240172151|ref|ZP_04750810.1| spou rRNA methylase family prote... 336 9e-91
gi|15828342|ref|NP_302605.1| RNA methyltransferase [Mycobacteriu... 335 2e-90
gi|342859145|ref|ZP_08715799.1| hypothetical protein MCOL_09713 ... 333 6e-90
gi|183980676|ref|YP_001848967.1| RNA methyltransferase [Mycobact... 331 3e-89
gi|254230740|ref|ZP_04924067.1| hypothetical protein TBCG_00375 ... 331 3e-89
gi|120401678|ref|YP_951507.1| tRNA/rRNA methyltransferase SpoU [... 329 1e-88
gi|118616019|ref|YP_904351.1| RNA methyltransferase [Mycobacteri... 327 4e-88
gi|145220847|ref|YP_001131525.1| tRNA/rRNA methyltransferase Spo... 324 4e-87
gi|296167821|ref|ZP_06850006.1| SpoU rRNA methylase [Mycobacteri... 319 1e-85
gi|126433083|ref|YP_001068774.1| tRNA/rRNA methyltransferase Spo... 313 5e-84
gi|108797462|ref|YP_637659.1| tRNA/rRNA methyltransferase SpoU [... 313 9e-84
gi|118468653|ref|YP_885145.1| spou rRNA methylase [Mycobacterium... 312 1e-83
gi|169631336|ref|YP_001704985.1| putative RNA methyltransferase ... 299 9e-80
gi|333988993|ref|YP_004521607.1| RNA methyltransferase [Mycobact... 294 3e-78
gi|343928549|ref|ZP_08767996.1| putative RNA methyltransferase [... 293 5e-78
gi|145296765|ref|YP_001139586.1| hypothetical protein cgR_2669 [... 291 4e-77
gi|334564199|ref|ZP_08517190.1| putative RNA methyltransferase [... 290 6e-77
gi|62391607|ref|YP_227009.1| SPOU rRNA methylase family protein ... 288 2e-76
gi|19553964|ref|NP_601966.1| rRNA methylase [Corynebacterium glu... 288 3e-76
gi|111022496|ref|YP_705468.1| RNA methyltransferase [Rhodococcus... 286 1e-75
gi|227505888|ref|ZP_03935937.1| RNA methyltransferase [Corynebac... 286 1e-75
gi|262203919|ref|YP_003275127.1| tRNA/rRNA methyltransferase Spo... 285 2e-75
gi|25029159|ref|NP_739213.1| putative RNA methyltransferase [Cor... 284 3e-75
gi|334697673|gb|AEG82470.1| hypothetical protein CULC809_01943 [... 284 5e-75
gi|337291700|ref|YP_004630721.1| hypothetical protein CULC22_020... 284 5e-75
gi|319949900|ref|ZP_08023903.1| putative RNA methyltransferase [... 282 1e-74
gi|172041466|ref|YP_001801180.1| putative rRNA methylase [Coryne... 281 2e-74
gi|227489272|ref|ZP_03919588.1| RNA methyltransferase [Corynebac... 281 2e-74
gi|300859281|ref|YP_003784264.1| hypothetical protein cpfrc_0186... 281 4e-74
gi|336324850|ref|YP_004604816.1| putative rRNA methylase [Coryne... 281 4e-74
gi|226365015|ref|YP_002782798.1| RNA methyltransferase [Rhodococ... 280 5e-74
gi|68535279|ref|YP_249984.1| putative rRNA methylase [Corynebact... 280 7e-74
gi|296119026|ref|ZP_06837599.1| SpoU rRNA methylase family prote... 280 8e-74
gi|302531148|ref|ZP_07283490.1| RNA methyltransferase [Streptomy... 279 2e-73
gi|260578510|ref|ZP_05846422.1| TrmH family RNA methyltransferas... 279 2e-73
>gi|15607521|ref|NP_214894.1| RNA methyltransferase [Mycobacterium tuberculosis H37Rv]
gi|15839764|ref|NP_334801.1| spoU rRNA methylase family protein [Mycobacterium tuberculosis
CDC1551]
gi|31791557|ref|NP_854050.1| RNA methyltransferase [Mycobacterium bovis AF2122/97]
25 more sequence titles
Length=183
Score = 366 bits (939), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 182/183 (99%), Positives = 183/183 (100%), Gaps = 0/183 (0%)
Query 1 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 60
+LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH
Sbjct 1 MLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 60
Query 61 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 120
TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA
Sbjct 61 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 120
Query 121 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 180
LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG
Sbjct 121 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 180
Query 181 RAW 183
RAW
Sbjct 181 RAW 183
>gi|148660146|ref|YP_001281669.1| RNA methyltransferase [Mycobacterium tuberculosis H37Ra]
gi|148821576|ref|YP_001286330.1| RNA methyltransferase [Mycobacterium tuberculosis F11]
gi|253797303|ref|YP_003030304.1| RNA methyltransferase [Mycobacterium tuberculosis KZN 1435]
gi|148504298|gb|ABQ72107.1| RNA methyltransferase [Mycobacterium tuberculosis H37Ra]
gi|148720103|gb|ABR04728.1| hypothetical RNA methyltransferase (RNA methylase) [Mycobacterium
tuberculosis F11]
gi|253318806|gb|ACT23409.1| RNA methyltransferase [Mycobacterium tuberculosis KZN 1435]
Length=220
Score = 365 bits (937), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 183/183 (100%), Positives = 183/183 (100%), Gaps = 0/183 (0%)
Query 1 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 60
VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH
Sbjct 38 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 97
Query 61 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 120
TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA
Sbjct 98 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 157
Query 121 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 180
LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG
Sbjct 158 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 217
Query 181 RAW 183
RAW
Sbjct 218 RAW 220
>gi|289552629|ref|ZP_06441839.1| RNA methyltransferase [Mycobacterium tuberculosis KZN 605]
gi|298523855|ref|ZP_07011264.1| spou rRNA methylase family protein [Mycobacterium tuberculosis
94_M4241A]
gi|308231537|ref|ZP_07412811.2| RNA methyltransferase [Mycobacterium tuberculosis SUMu001]
27 more sequence titles
Length=216
Score = 365 bits (937), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 183/183 (100%), Positives = 183/183 (100%), Gaps = 0/183 (0%)
Query 1 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 60
VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH
Sbjct 34 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 93
Query 61 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 120
TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA
Sbjct 94 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 153
Query 121 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 180
LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG
Sbjct 154 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 213
Query 181 RAW 183
RAW
Sbjct 214 RAW 216
>gi|254549323|ref|ZP_05139770.1| RNA methyltransferase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=199
Score = 365 bits (936), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 183/183 (100%), Positives = 183/183 (100%), Gaps = 0/183 (0%)
Query 1 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 60
VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH
Sbjct 17 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 76
Query 61 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 120
TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA
Sbjct 77 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 136
Query 121 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 180
LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG
Sbjct 137 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 196
Query 181 RAW 183
RAW
Sbjct 197 RAW 199
>gi|289756447|ref|ZP_06515825.1| RNA methyltransferase [Mycobacterium tuberculosis T85]
gi|289712011|gb|EFD76023.1| RNA methyltransferase [Mycobacterium tuberculosis T85]
gi|326902206|gb|EGE49139.1| RNA methyltransferase [Mycobacterium tuberculosis W-148]
gi|339293434|gb|AEJ45545.1| RNA methyltransferase [Mycobacterium tuberculosis CCDC5079]
gi|339297078|gb|AEJ49188.1| RNA methyltransferase [Mycobacterium tuberculosis CCDC5180]
Length=183
Score = 363 bits (933), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 181/183 (99%), Positives = 183/183 (100%), Gaps = 0/183 (0%)
Query 1 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 60
+LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH
Sbjct 1 MLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 60
Query 61 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 120
TVHIVGRRRWNRRGA+VTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA
Sbjct 61 TVHIVGRRRWNRRGAVVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 120
Query 121 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 180
LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG
Sbjct 121 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 180
Query 181 RAW 183
RAW
Sbjct 181 RAW 183
>gi|289445918|ref|ZP_06435662.1| RNA methyltransferase [Mycobacterium tuberculosis CPHL_A]
gi|289418876|gb|EFD16077.1| RNA methyltransferase [Mycobacterium tuberculosis CPHL_A]
Length=183
Score = 363 bits (933), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 181/183 (99%), Positives = 182/183 (99%), Gaps = 0/183 (0%)
Query 1 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 60
+LLRDGDARNVVDAYRYWTREAIIADIDT RHPLHVAIENFGHDANIGSVVRTANAFAVH
Sbjct 1 MLLRDGDARNVVDAYRYWTREAIIADIDTHRHPLHVAIENFGHDANIGSVVRTANAFAVH 60
Query 61 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 120
TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA
Sbjct 61 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 120
Query 121 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 180
LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG
Sbjct 121 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 180
Query 181 RAW 183
RAW
Sbjct 181 RAW 183
>gi|254363345|ref|ZP_04979391.1| hypothetical RNA methyltransferase (RNA methylase) [Mycobacterium
tuberculosis str. Haarlem]
gi|134148859|gb|EBA40904.1| hypothetical RNA methyltransferase (RNA methylase) [Mycobacterium
tuberculosis str. Haarlem]
Length=220
Score = 362 bits (930), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 182/183 (99%), Positives = 182/183 (99%), Gaps = 0/183 (0%)
Query 1 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 60
VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH
Sbjct 38 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 97
Query 61 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 120
TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA
Sbjct 98 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 157
Query 121 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 180
LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADL
Sbjct 158 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLD 217
Query 181 RAW 183
RAW
Sbjct 218 RAW 220
>gi|289744077|ref|ZP_06503455.1| RNA methyltransferase [Mycobacterium tuberculosis 02_1987]
gi|289684605|gb|EFD52093.1| RNA methyltransferase [Mycobacterium tuberculosis 02_1987]
Length=220
Score = 361 bits (927), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 181/183 (99%), Positives = 182/183 (99%), Gaps = 0/183 (0%)
Query 1 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 60
VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH
Sbjct 38 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 97
Query 61 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 120
TVHIVGRRRWNRRGA+VTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA
Sbjct 98 TVHIVGRRRWNRRGAVVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 157
Query 121 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 180
LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWI QHADLG
Sbjct 158 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIPQHADLG 217
Query 181 RAW 183
RAW
Sbjct 218 RAW 220
>gi|294995137|ref|ZP_06800828.1| putative RNA methyltransferase [Mycobacterium tuberculosis 210]
Length=192
Score = 358 bits (920), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 179/181 (99%), Positives = 181/181 (100%), Gaps = 0/181 (0%)
Query 1 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 60
+LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH
Sbjct 1 MLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 60
Query 61 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 120
TVHIVGRRRWNRRGA+VTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA
Sbjct 61 TVHIVGRRRWNRRGAVVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 120
Query 121 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 180
LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG
Sbjct 121 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 180
Query 181 R 181
R
Sbjct 181 R 181
>gi|289568293|ref|ZP_06448520.1| RNA methyltransferase [Mycobacterium tuberculosis T17]
gi|289542046|gb|EFD45695.1| RNA methyltransferase [Mycobacterium tuberculosis T17]
Length=172
Score = 346 bits (888), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 172/172 (100%), Positives = 172/172 (100%), Gaps = 0/172 (0%)
Query 12 VDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHTVHIVGRRRWN 71
VDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHTVHIVGRRRWN
Sbjct 1 VDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHTVHIVGRRRWN 60
Query 72 RRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTALPRECLLLFGQ 131
RRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTALPRECLLLFGQ
Sbjct 61 RRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTALPRECLLLFGQ 120
Query 132 EGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGRAW 183
EGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGRAW
Sbjct 121 EGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGRAW 172
>gi|254777225|ref|ZP_05218741.1| spou rRNA methylase family protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length=218
Score = 340 bits (873), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 167/183 (92%), Positives = 173/183 (95%), Gaps = 0/183 (0%)
Query 1 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 60
+LLRDGD RNVVDAYRYWTREAIIADID RRHPLHVAIENFGHDANIGSVVRTANAFAVH
Sbjct 36 ILLRDGDTRNVVDAYRYWTREAIIADIDRRRHPLHVAIENFGHDANIGSVVRTANAFAVH 95
Query 61 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 120
TVHIVGRRRWNRRGAMVTDRYQRLCHHDST LL+FAA AGLTVVAVDNVPGAARLE+T
Sbjct 96 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTAELLDFAATAGLTVVAVDNVPGAARLEETT 155
Query 121 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 180
LPRECLL+FGQEGPGITDD R GA +TVSIAQFGSTRSINAGVAAGIAMHAWI+QHADL
Sbjct 156 LPRECLLVFGQEGPGITDDTRTGATLTVSIAQFGSTRSINAGVAAGIAMHAWIQQHADLS 215
Query 181 RAW 183
RAW
Sbjct 216 RAW 218
>gi|118462459|ref|YP_883915.1| spou rRNA methylase [Mycobacterium avium 104]
gi|118163746|gb|ABK64643.1| spou rRNA methylase family protein [Mycobacterium avium 104]
Length=214
Score = 340 bits (871), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 167/183 (92%), Positives = 173/183 (95%), Gaps = 0/183 (0%)
Query 1 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 60
+LLRDGD RNVVDAYRYWTREAIIADID RRHPLHVAIENFGHDANIGSVVRTANAFAVH
Sbjct 32 ILLRDGDTRNVVDAYRYWTREAIIADIDRRRHPLHVAIENFGHDANIGSVVRTANAFAVH 91
Query 61 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 120
TVHIVGRRRWNRRGAMVTDRYQRLCHHDST LL+FAA AGLTVVAVDNVPGAARLE+T
Sbjct 92 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTAELLDFAATAGLTVVAVDNVPGAARLEETT 151
Query 121 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 180
LPRECLL+FGQEGPGITDD R GA +TVSIAQFGSTRSINAGVAAGIAMHAWI+QHADL
Sbjct 152 LPRECLLVFGQEGPGITDDTRTGATLTVSIAQFGSTRSINAGVAAGIAMHAWIQQHADLS 211
Query 181 RAW 183
RAW
Sbjct 212 RAW 214
>gi|336460401|gb|EGO39301.1| rRNA methylase [Mycobacterium avium subsp. paratuberculosis S397]
Length=215
Score = 339 bits (869), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 165/183 (91%), Positives = 173/183 (95%), Gaps = 0/183 (0%)
Query 1 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 60
+LLRDGD RNVVDAYRYW+REAIIADID RRHPLHVAIENFGHDANIGSVVRTANAFAVH
Sbjct 33 ILLRDGDTRNVVDAYRYWSREAIIADIDRRRHPLHVAIENFGHDANIGSVVRTANAFAVH 92
Query 61 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 120
TVHIVGRRRWNRRGAMVTDRYQRLCHHDST LL+FAA AGLTVVAVDNVPGAARLE+T
Sbjct 93 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTAELLDFAAAAGLTVVAVDNVPGAARLEETT 152
Query 121 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 180
LPRECLL+FGQEGPGITDD R GA +TVSIAQFGSTRSINAGVAAGIAMHAWI+QHADL
Sbjct 153 LPRECLLVFGQEGPGITDDTRTGATLTVSIAQFGSTRSINAGVAAGIAMHAWIQQHADLS 212
Query 181 RAW 183
+AW
Sbjct 213 QAW 215
>gi|41409957|ref|NP_962793.1| hypothetical protein MAP3859 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398790|gb|AAS06409.1| hypothetical protein MAP_3859 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=219
Score = 339 bits (869), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 165/183 (91%), Positives = 173/183 (95%), Gaps = 0/183 (0%)
Query 1 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 60
+LLRDGD RNVVDAYRYW+REAIIADID RRHPLHVAIENFGHDANIGSVVRTANAFAVH
Sbjct 37 ILLRDGDTRNVVDAYRYWSREAIIADIDRRRHPLHVAIENFGHDANIGSVVRTANAFAVH 96
Query 61 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 120
TVHIVGRRRWNRRGAMVTDRYQRLCHHDST LL+FAA AGLTVVAVDNVPGAARLE+T
Sbjct 97 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTAELLDFAAAAGLTVVAVDNVPGAARLEETT 156
Query 121 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 180
LPRECLL+FGQEGPGITDD R GA +TVSIAQFGSTRSINAGVAAGIAMHAWI+QHADL
Sbjct 157 LPRECLLVFGQEGPGITDDTRTGATLTVSIAQFGSTRSINAGVAAGIAMHAWIQQHADLS 216
Query 181 RAW 183
+AW
Sbjct 217 QAW 219
>gi|254822868|ref|ZP_05227869.1| hypothetical protein MintA_23264 [Mycobacterium intracellulare
ATCC 13950]
Length=219
Score = 337 bits (864), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 163/183 (90%), Positives = 172/183 (94%), Gaps = 0/183 (0%)
Query 1 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 60
+LLR+GD RNVVDAYRYWTREAI+ADID RRHPLHVAIENFGHDANIGSVVRTANAFAVH
Sbjct 37 ILLREGDTRNVVDAYRYWTREAIVADIDRRRHPLHVAIENFGHDANIGSVVRTANAFAVH 96
Query 61 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 120
TVHIVGRRRWNRRGAMVTDRYQRLCHHDST L +FAA AGLTVVAVDNVPGAARLE+TA
Sbjct 97 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTAELFDFAADAGLTVVAVDNVPGAARLEETA 156
Query 121 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 180
LPRECLL+FGQEGPGITDD R+GA +TVSIAQFGSTRSINAGVAAGIAMH W+ QHADL
Sbjct 157 LPRECLLVFGQEGPGITDDTRSGATLTVSIAQFGSTRSINAGVAAGIAMHTWVEQHADLS 216
Query 181 RAW 183
RAW
Sbjct 217 RAW 219
>gi|240172151|ref|ZP_04750810.1| spou rRNA methylase family protein [Mycobacterium kansasii ATCC
12478]
Length=218
Score = 336 bits (861), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 167/182 (92%), Positives = 173/182 (96%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LLRDGD RNVVDAYRYWTREAI+ADIDTRRH LHVAIENFGHDANIGSVVRTANAFAVHT
Sbjct 37 LLRDGDTRNVVDAYRYWTREAIVADIDTRRHSLHVAIENFGHDANIGSVVRTANAFAVHT 96
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQRL HHDST LL+FA+GAGLTVVAVDNVPGA RLE+T L
Sbjct 97 VHIVGRRRWNRRGAMVTDRYQRLRHHDSTAELLDFASGAGLTVVAVDNVPGAVRLEETTL 156
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
PRECLLLFGQEGPGIT DARAGA+VT+SIAQFGSTRSINAGVAAGIAMHAWIRQHADL R
Sbjct 157 PRECLLLFGQEGPGITADARAGASVTLSIAQFGSTRSINAGVAAGIAMHAWIRQHADLSR 216
Query 182 AW 183
AW
Sbjct 217 AW 218
>gi|15828342|ref|NP_302605.1| RNA methyltransferase [Mycobacterium leprae TN]
gi|221230819|ref|YP_002504235.1| putative RNA methyltransferase [Mycobacterium leprae Br4923]
gi|13094035|emb|CAC32002.1| possible RNA methyltransferase [Mycobacterium leprae]
gi|219933926|emb|CAR72584.1| possible RNA methyltransferase [Mycobacterium leprae Br4923]
Length=182
Score = 335 bits (859), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 161/182 (89%), Positives = 171/182 (94%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
+LRDGD RNVVDAYRYWTREAII DID RRHP HVAIENFGHDANIGSVVRTANAFAV T
Sbjct 1 MLRDGDTRNVVDAYRYWTREAIIVDIDRRRHPFHVAIENFGHDANIGSVVRTANAFAVDT 60
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
+HIVGRRRWNRRGAMVTDRYQRLCHHDST +L+FAAGAGLTVVAVDN+PGAARLEQT L
Sbjct 61 MHIVGRRRWNRRGAMVTDRYQRLCHHDSTASMLDFAAGAGLTVVAVDNIPGAARLEQTTL 120
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
PR+CLL+FGQEGPGITD+AR GAA+ VSIAQFGSTRSINAGVAAGIAMHAWIRQHAD+ R
Sbjct 121 PRQCLLVFGQEGPGITDEARTGAAMIVSIAQFGSTRSINAGVAAGIAMHAWIRQHADMSR 180
Query 182 AW 183
AW
Sbjct 181 AW 182
>gi|342859145|ref|ZP_08715799.1| hypothetical protein MCOL_09713 [Mycobacterium colombiense CECT
3035]
gi|342133386|gb|EGT86589.1| hypothetical protein MCOL_09713 [Mycobacterium colombiense CECT
3035]
Length=216
Score = 333 bits (855), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 164/183 (90%), Positives = 169/183 (93%), Gaps = 0/183 (0%)
Query 1 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 60
VLLR+GD RNVVDAYRYW+REAIIADID RRHPLHVAIENFGHDANIGSVVRTANAFAVH
Sbjct 34 VLLREGDTRNVVDAYRYWSREAIIADIDRRRHPLHVAIENFGHDANIGSVVRTANAFAVH 93
Query 61 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 120
TVHIVGRRRWNRRGAMVTDRYQRLCHHDST LL FAA AGLTVVAVDNVPGA RLE+ A
Sbjct 94 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTAELLAFAADAGLTVVAVDNVPGAVRLEEAA 153
Query 121 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 180
LPRECLL+FGQEGPGITDD R GA +TVSIAQFGSTRSINAGVAAGIAMH WI QHADL
Sbjct 154 LPRECLLVFGQEGPGITDDTRTGAGLTVSIAQFGSTRSINAGVAAGIAMHTWIEQHADLS 213
Query 181 RAW 183
RAW
Sbjct 214 RAW 216
>gi|183980676|ref|YP_001848967.1| RNA methyltransferase [Mycobacterium marinum M]
gi|183174002|gb|ACC39112.1| RNA methyltransferase [Mycobacterium marinum M]
Length=214
Score = 331 bits (849), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 164/182 (91%), Positives = 169/182 (93%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LLRDGDARNVVDAYRYWTREAI+ADID RRHPLH+AIENFGHDANIGSVVRTANAFAV T
Sbjct 33 LLRDGDARNVVDAYRYWTREAIVADIDKRRHPLHIAIENFGHDANIGSVVRTANAFAVDT 92
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQRL HHDST LLEFA GAGLTVVAVDNVPGAARLE+T L
Sbjct 93 VHIVGRRRWNRRGAMVTDRYQRLRHHDSTAELLEFAVGAGLTVVAVDNVPGAARLEETTL 152
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
PR+CLL+FGQEGPGITDD R GA VTVSIAQFGSTRSINAGVAAGIAMHAWIRQH DL
Sbjct 153 PRDCLLVFGQEGPGITDDTRVGAVVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHGDLSH 212
Query 182 AW 183
AW
Sbjct 213 AW 214
>gi|254230740|ref|ZP_04924067.1| hypothetical protein TBCG_00375 [Mycobacterium tuberculosis C]
gi|124599799|gb|EAY58809.1| hypothetical protein TBCG_00375 [Mycobacterium tuberculosis C]
Length=246
Score = 331 bits (848), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 166/166 (100%), Positives = 166/166 (100%), Gaps = 0/166 (0%)
Query 1 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 60
VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH
Sbjct 38 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 97
Query 61 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 120
TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA
Sbjct 98 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 157
Query 121 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAG 166
LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAG
Sbjct 158 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAG 203
>gi|120401678|ref|YP_951507.1| tRNA/rRNA methyltransferase SpoU [Mycobacterium vanbaalenii PYR-1]
gi|119954496|gb|ABM11501.1| tRNA/rRNA methyltransferase (SpoU) [Mycobacterium vanbaalenii
PYR-1]
Length=214
Score = 329 bits (843), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 160/182 (88%), Positives = 173/182 (96%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LLR GD RNVVDAYRYWTR+AIIADID RRHPLH+AIENFG+DANIGSVVRTANAFAVHT
Sbjct 33 LLRAGDTRNVVDAYRYWTRDAIIADIDARRHPLHIAIENFGNDANIGSVVRTANAFAVHT 92
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQRLCHHD+T LL+FA AGLTVVAVDNVPGA+R+E+ +L
Sbjct 93 VHIVGRRRWNRRGAMVTDRYQRLCHHDTTAELLDFATRAGLTVVAVDNVPGASRIEEASL 152
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
PR+CLL+FGQEGPGITDDA+AGA +TVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR
Sbjct 153 PRDCLLIFGQEGPGITDDAKAGAPLTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 212
Query 182 AW 183
AW
Sbjct 213 AW 214
>gi|118616019|ref|YP_904351.1| RNA methyltransferase [Mycobacterium ulcerans Agy99]
gi|118568129|gb|ABL02880.1| RNA methyltransferase [Mycobacterium ulcerans Agy99]
Length=218
Score = 327 bits (838), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 162/182 (90%), Positives = 168/182 (93%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LLRDGDARNVVDAYRYWTREAI+ADID RRHPLH+AIENFGHDANIGSVVRTANAFAV T
Sbjct 37 LLRDGDARNVVDAYRYWTREAIVADIDKRRHPLHIAIENFGHDANIGSVVRTANAFAVDT 96
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQRL HHDS LLEFA GAGLTVVAVDNVPGAARLE+T L
Sbjct 97 VHIVGRRRWNRRGAMVTDRYQRLRHHDSIAELLEFAVGAGLTVVAVDNVPGAARLEETTL 156
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
PR+CLL+FG+EGPGITDD R GA VTVSIAQFGSTRSINAGVAAGIAMHAWIRQH DL
Sbjct 157 PRDCLLVFGREGPGITDDTRVGAVVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHGDLSH 216
Query 182 AW 183
AW
Sbjct 217 AW 218
>gi|145220847|ref|YP_001131525.1| tRNA/rRNA methyltransferase SpoU [Mycobacterium gilvum PYR-GCK]
gi|315442199|ref|YP_004075078.1| rRNA methylase [Mycobacterium sp. Spyr1]
gi|145213333|gb|ABP42737.1| tRNA/rRNA methyltransferase (SpoU) [Mycobacterium gilvum PYR-GCK]
gi|315260502|gb|ADT97243.1| rRNA methylase [Mycobacterium sp. Spyr1]
Length=215
Score = 324 bits (830), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 159/182 (88%), Positives = 169/182 (93%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LLRDGD+RNVVDAYRYWTREAIIADIDTRRHPLHVAIENFG+DANIG VVRTANAFAV T
Sbjct 34 LLRDGDSRNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGNDANIGGVVRTANAFAVDT 93
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQRLCHHD+T GLL FAA AGLTVVAVDNVPGA R+E+ +L
Sbjct 94 VHIVGRRRWNRRGAMVTDRYQRLCHHDTTAGLLGFAAEAGLTVVAVDNVPGAVRVEEVSL 153
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
PRECLL+FG EGPGIT+DA+ GAA+ VSIAQFGSTRSINA VAAGI MHAWIRQHADL R
Sbjct 154 PRECLLIFGAEGPGITEDAKTGAALAVSIAQFGSTRSINASVAAGIVMHAWIRQHADLSR 213
Query 182 AW 183
AW
Sbjct 214 AW 215
>gi|296167821|ref|ZP_06850006.1| SpoU rRNA methylase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897019|gb|EFG76640.1| SpoU rRNA methylase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=218
Score = 319 bits (817), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 169/183 (93%), Positives = 174/183 (96%), Gaps = 0/183 (0%)
Query 1 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 60
+LLR+GD RNVVDAYRYWTREAIIADID RRHPLHVAIENFGHDANIGSVVR ANAFAVH
Sbjct 36 ILLREGDTRNVVDAYRYWTREAIIADIDRRRHPLHVAIENFGHDANIGSVVRAANAFAVH 95
Query 61 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 120
TVHIVGRRRWNRRGAMVTDRYQRL HHDST LL FAAGAGLTVVAVDNVPGAARLE+TA
Sbjct 96 TVHIVGRRRWNRRGAMVTDRYQRLRHHDSTAALLAFAAGAGLTVVAVDNVPGAARLEETA 155
Query 121 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 180
LPRECLL+FGQEGPGITDD R+GAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADL
Sbjct 156 LPRECLLVFGQEGPGITDDVRSGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLT 215
Query 181 RAW 183
RAW
Sbjct 216 RAW 218
>gi|126433083|ref|YP_001068774.1| tRNA/rRNA methyltransferase SpoU [Mycobacterium sp. JLS]
gi|126232883|gb|ABN96283.1| tRNA/rRNA methyltransferase (SpoU) [Mycobacterium sp. JLS]
Length=214
Score = 313 bits (803), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 155/182 (86%), Positives = 164/182 (91%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LLRDGD RNVVDAYRYWTREAIIADID RRHPLH+AIENFG+DANIGSVVRTANAFAV T
Sbjct 33 LLRDGDTRNVVDAYRYWTREAIIADIDRRRHPLHIAIENFGNDANIGSVVRTANAFAVDT 92
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQRL HHDST +L+FAA AGLT VAVDN+PGA LE T L
Sbjct 93 VHIVGRRRWNRRGAMVTDRYQRLRHHDSTAEMLDFAAEAGLTAVAVDNIPGAVPLEHTDL 152
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
PRECLL+FGQEGPGITDDA+ GA +TVSIA FGSTRSINA VAAGIAMH WI QHADLG+
Sbjct 153 PRECLLIFGQEGPGITDDAKTGARLTVSIAAFGSTRSINAAVAAGIAMHTWIVQHADLGK 212
Query 182 AW 183
AW
Sbjct 213 AW 214
>gi|108797462|ref|YP_637659.1| tRNA/rRNA methyltransferase SpoU [Mycobacterium sp. MCS]
gi|119866547|ref|YP_936499.1| tRNA/rRNA methyltransferase SpoU [Mycobacterium sp. KMS]
gi|108767881|gb|ABG06603.1| tRNA/rRNA methyltransferase (SpoU) [Mycobacterium sp. MCS]
gi|119692636|gb|ABL89709.1| tRNA/rRNA methyltransferase (SpoU) [Mycobacterium sp. KMS]
Length=214
Score = 313 bits (801), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 155/182 (86%), Positives = 164/182 (91%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LLRDGD RNVVDAYRYWTREAIIADID RRHPLH+AIENFG+DANIGSVVRTANAFAV T
Sbjct 33 LLRDGDTRNVVDAYRYWTREAIIADIDRRRHPLHIAIENFGNDANIGSVVRTANAFAVDT 92
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQRL HHDST LL+FAA AGLT VAVDN+PGA LE T L
Sbjct 93 VHIVGRRRWNRRGAMVTDRYQRLRHHDSTAELLDFAAEAGLTAVAVDNIPGAVPLEHTDL 152
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
PRECLL+FGQEGPGIT+DA+ GA +TVSIA FGSTRSINA VAAGIAMH WI QHADLG+
Sbjct 153 PRECLLIFGQEGPGITEDAKTGARLTVSIAAFGSTRSINAAVAAGIAMHTWIVQHADLGK 212
Query 182 AW 183
AW
Sbjct 213 AW 214
>gi|118468653|ref|YP_885145.1| spou rRNA methylase [Mycobacterium smegmatis str. MC2 155]
gi|118169940|gb|ABK70836.1| spou rRNA methylase family protein [Mycobacterium smegmatis str.
MC2 155]
Length=214
Score = 312 bits (800), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/182 (85%), Positives = 166/182 (92%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LLRDGD RNVVDAYRYWTR AI+ADIDTRRHPLH+AIENFG DANIG+VVRTANAFAV T
Sbjct 33 LLRDGDYRNVVDAYRYWTRPAIVADIDTRRHPLHIAIENFGSDANIGTVVRTANAFAVDT 92
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQRL HHD+T LL+FA AGL VVAVDNVPG+ RLE+T L
Sbjct 93 VHIVGRRRWNRRGAMVTDRYQRLRHHDTTADLLDFADDAGLVVVAVDNVPGSVRLEETEL 152
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
PR CLL+FGQEGPGIT +A+AGAAVTVSIAQFGSTRSINAGVAAGIAMHAWI +HAD+ +
Sbjct 153 PRNCLLIFGQEGPGITPEAQAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWITRHADMSK 212
Query 182 AW 183
AW
Sbjct 213 AW 214
>gi|169631336|ref|YP_001704985.1| putative RNA methyltransferase [Mycobacterium abscessus ATCC
19977]
gi|169243303|emb|CAM64331.1| Putative RNA methyltransferase [Mycobacterium abscessus]
Length=224
Score = 299 bits (766), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 147/182 (81%), Positives = 162/182 (90%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LLRDGDARNVVDAYRYW REAI+ADID RRH LH+AIENF +DANIG+VVRTANAFAVHT
Sbjct 43 LLRDGDARNVVDAYRYWRREAIVADIDRRRHRLHIAIENFENDANIGTVVRTANAFAVHT 102
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQ L HHDST LL++A AGLTVVAVDNVPG+ LE L
Sbjct 103 VHIVGRRRWNRRGAMVTDRYQHLMHHDSTDELLDYAKRAGLTVVAVDNVPGSVPLETAEL 162
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
P +CLL+FGQEGPG+TD +++GA +TVSIAQFGSTRSINAGVAAGIAMHAW+RQHADL
Sbjct 163 PVDCLLVFGQEGPGVTDASKSGAVMTVSIAQFGSTRSINAGVAAGIAMHAWVRQHADLDG 222
Query 182 AW 183
AW
Sbjct 223 AW 224
>gi|333988993|ref|YP_004521607.1| RNA methyltransferase [Mycobacterium sp. JDM601]
gi|333484961|gb|AEF34353.1| RNA methyltransferase [Mycobacterium sp. JDM601]
Length=222
Score = 294 bits (753), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/182 (82%), Positives = 156/182 (86%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LLRDGD RNVVDAYRYWTREAIIADID+RRH LHVAIENF HDANIGSVVRTANAFAV T
Sbjct 41 LLRDGDRRNVVDAYRYWTREAIIADIDSRRHRLHVAIENFEHDANIGSVVRTANAFAVDT 100
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQRL HHD GLLEFAA GLTVVAVDNV GA RLEQT L
Sbjct 101 VHIVGRRRWNRRGAMVTDRYQRLRHHDQVAGLLEFAAQQGLTVVAVDNVAGAQRLEQTVL 160
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
P +CLL+FG EGPGI+D+ RAGA + VSIA FGSTRSIN GVAAGI MH WI +H +L
Sbjct 161 PSDCLLVFGSEGPGISDEMRAGAGLLVSIAAFGSTRSINVGVAAGIVMHTWIARHGNLEN 220
Query 182 AW 183
AW
Sbjct 221 AW 222
>gi|343928549|ref|ZP_08767996.1| putative RNA methyltransferase [Gordonia alkanivorans NBRC 16433]
gi|343761560|dbj|GAA14922.1| putative RNA methyltransferase [Gordonia alkanivorans NBRC 16433]
Length=228
Score = 293 bits (751), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 144/182 (80%), Positives = 157/182 (87%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LL GD RNVVDAYRYW RE I+ADIDTRRHPLHVAIENF HDANIG+VVRTANAFAV
Sbjct 47 LLATGDTRNVVDAYRYWKREEIVADIDTRRHPLHVAIENFAHDANIGTVVRTANAFAVAA 106
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQ L HHD+ LL++A G GL+VVAVDN PG+ LE L
Sbjct 107 VHIVGRRRWNRRGAMVTDRYQHLMHHDTVGDLLDWARGEGLSVVAVDNTPGSRPLETVEL 166
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
PREC+LLFGQEGPG++DDA+ A +TVSIAQFGSTRSINAGVAAGIAMHAWIRQHADL +
Sbjct 167 PRECVLLFGQEGPGVSDDAQRQADMTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLDQ 226
Query 182 AW 183
AW
Sbjct 227 AW 228
>gi|145296765|ref|YP_001139586.1| hypothetical protein cgR_2669 [Corynebacterium glutamicum R]
gi|140846685|dbj|BAF55684.1| hypothetical protein [Corynebacterium glutamicum R]
Length=206
Score = 291 bits (744), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 141/182 (78%), Positives = 156/182 (86%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LL +GD RNVVDAYRYWTREAI+ DIDTRRH LHVAIENF +DANIG+VVRTANAFAV+T
Sbjct 25 LLNEGDRRNVVDAYRYWTREAIVEDIDTRRHSLHVAIENFENDANIGTVVRTANAFAVNT 84
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQ L HH+ LL +A GLT+VA+DN PG+ LE L
Sbjct 85 VHIVGRRRWNRRGAMVTDRYQHLMHHEDVDSLLAWAIAEGLTIVAIDNTPGSVPLETAEL 144
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
P+ CLLLFGQEGPG+T+ ARAGA +T SIAQFGSTRSINAGVAAGIAMHAWIRQHADL +
Sbjct 145 PKNCLLLFGQEGPGVTEAARAGALMTCSIAQFGSTRSINAGVAAGIAMHAWIRQHADLSQ 204
Query 182 AW 183
AW
Sbjct 205 AW 206
>gi|334564199|ref|ZP_08517190.1| putative RNA methyltransferase [Corynebacterium bovis DSM 20582]
Length=247
Score = 290 bits (742), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 145/182 (80%), Positives = 157/182 (87%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LL +GD RNVVDAYRYWTREAI+ DID RRHPLHVAIENFG+DANIG+VVRTANAFAV T
Sbjct 66 LLAEGDRRNVVDAYRYWTREAIVRDIDARRHPLHVAIENFGNDANIGTVVRTANAFAVDT 125
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQ L HH G+LEFA GLTVVAVDN PG+ LE T L
Sbjct 126 VHIVGRRRWNRRGAMVTDRYQHLRHHADVAGVLEFARAHGLTVVAVDNTPGSVPLETTDL 185
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
P CLLLFGQEGPG+T+ AR GAA+TVSIAQFGSTRS+NAGVAAGIAMHAW+R+HADL
Sbjct 186 PERCLLLFGQEGPGVTEAARDGAALTVSIAQFGSTRSVNAGVAAGIAMHAWVRRHADLRA 245
Query 182 AW 183
AW
Sbjct 246 AW 247
>gi|62391607|ref|YP_227009.1| SPOU rRNA methylase family protein [Corynebacterium glutamicum
ATCC 13032]
gi|41326949|emb|CAF20793.1| SPOU RRNA METHYLASE FAMILY PROTEIN [Corynebacterium glutamicum
ATCC 13032]
Length=222
Score = 288 bits (737), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/183 (77%), Positives = 155/183 (85%), Gaps = 0/183 (0%)
Query 1 VLLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVH 60
LL +GD RNVVDAYRYWTREAI+ DIDTRRH LHVAIENF +DANIG+VVRTANAFAV+
Sbjct 40 TLLNEGDRRNVVDAYRYWTREAIVEDIDTRRHSLHVAIENFENDANIGTVVRTANAFAVN 99
Query 61 TVHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTA 120
TVHIVGRRRWNRRGAMVTDRYQ L HH+ LL +A LT+VA+DN PG+ LE
Sbjct 100 TVHIVGRRRWNRRGAMVTDRYQHLMHHEDVDSLLAWAIAERLTIVAIDNTPGSVPLETAE 159
Query 121 LPRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLG 180
LP+ CLLLFGQEGPG+T+ ARAGA +T SIAQFGSTRSINAGVAAGIAMHAWIRQHADL
Sbjct 160 LPKNCLLLFGQEGPGVTEAARAGALMTCSIAQFGSTRSINAGVAAGIAMHAWIRQHADLS 219
Query 181 RAW 183
+AW
Sbjct 220 QAW 222
>gi|19553964|ref|NP_601966.1| rRNA methylase [Corynebacterium glutamicum ATCC 13032]
gi|21325544|dbj|BAC00166.1| rRNA methylases [Corynebacterium glutamicum ATCC 13032]
gi|344046169|gb|EGV41835.1| SPOU rRNA methylase family protein [Corynebacterium glutamicum
S9114]
Length=206
Score = 288 bits (737), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/182 (77%), Positives = 155/182 (86%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LL +GD RNVVDAYRYWTREAI+ DIDTRRH LHVAIENF +DANIG+VVRTANAFAV+T
Sbjct 25 LLNEGDRRNVVDAYRYWTREAIVEDIDTRRHSLHVAIENFENDANIGTVVRTANAFAVNT 84
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQ L HH+ LL +A LT+VA+DN PG+ LE L
Sbjct 85 VHIVGRRRWNRRGAMVTDRYQHLMHHEDVDSLLAWAIAERLTIVAIDNTPGSVPLETAEL 144
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
P+ CLLLFGQEGPG+T+ ARAGA +T SIAQFGSTRSINAGVAAGIAMHAWIRQHADL +
Sbjct 145 PKNCLLLFGQEGPGVTEAARAGALMTCSIAQFGSTRSINAGVAAGIAMHAWIRQHADLSQ 204
Query 182 AW 183
AW
Sbjct 205 AW 206
>gi|111022496|ref|YP_705468.1| RNA methyltransferase [Rhodococcus jostii RHA1]
gi|110822026|gb|ABG97310.1| probable RNA methyltransferase [Rhodococcus jostii RHA1]
Length=230
Score = 286 bits (731), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 144/182 (80%), Positives = 158/182 (87%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LL GD RNVVDAYRYWTREAI+ADID+RRHPLHVAIENFGHDANIG+VVRTANAFA
Sbjct 49 LLAGGDRRNVVDAYRYWTREAIVADIDSRRHPLHVAIENFGHDANIGTVVRTANAFAAAA 108
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQ + HH GL+EFA GLT+VAVDN PG+ LE +L
Sbjct 109 VHIVGRRRWNRRGAMVTDRYQHVLHHSDVDGLVEFARERGLTIVAVDNTPGSVPLETASL 168
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
PR+C+LLFGQEGPG+TD A+ AA+TVSIAQFGSTRSINAGVAAGIAMHAW+RQHADL R
Sbjct 169 PRDCVLLFGQEGPGVTDQAKKVAAMTVSIAQFGSTRSINAGVAAGIAMHAWVRQHADLDR 228
Query 182 AW 183
AW
Sbjct 229 AW 230
>gi|227505888|ref|ZP_03935937.1| RNA methyltransferase [Corynebacterium striatum ATCC 6940]
gi|227197516|gb|EEI77564.1| RNA methyltransferase [Corynebacterium striatum ATCC 6940]
Length=229
Score = 286 bits (731), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/182 (77%), Positives = 153/182 (85%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LLRDGD RNVVDAYRYW+REAI ADID RRH LH+AIENF +D+NIG+VVRTANAFAV T
Sbjct 48 LLRDGDHRNVVDAYRYWSREAITADIDKRRHALHIAIENFENDSNIGTVVRTANAFAVDT 107
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQ L HH + LLE+A+ GLTVVA+DN PG LE L
Sbjct 108 VHIVGRRRWNRRGAMVTDRYQHLMHHATVAELLEWASDKGLTVVAIDNTPGCVPLETAEL 167
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
P CLLLFGQEGPG+T +A+ A +T SIAQFGSTRSINAGVAAGIAMHAWIRQHADL +
Sbjct 168 PERCLLLFGQEGPGVTQEAQDAAMMTCSIAQFGSTRSINAGVAAGIAMHAWIRQHADLEQ 227
Query 182 AW 183
AW
Sbjct 228 AW 229
>gi|262203919|ref|YP_003275127.1| tRNA/rRNA methyltransferase SpoU [Gordonia bronchialis DSM 43247]
gi|262087266|gb|ACY23234.1| tRNA/rRNA methyltransferase (SpoU) [Gordonia bronchialis DSM
43247]
Length=225
Score = 285 bits (729), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/182 (79%), Positives = 159/182 (88%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LL +GD RNVVDAYRYWTREAI+AD+DTRRHP HVAIENF HDANIG+VVRTANAFA
Sbjct 44 LLAEGDTRNVVDAYRYWTREAIVADLDTRRHPFHVAIENFAHDANIGTVVRTANAFAAAA 103
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQ L HH++ + LL +A AGL+VVAVDN PGA LE L
Sbjct 104 VHIVGRRRWNRRGAMVTDRYQHLMHHETVSDLLAWARVAGLSVVAVDNTPGARPLETVEL 163
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
PREC+LLFGQEGPG++DDA+A A +TVSIAQFGSTRSINAGVAAGIAMH+W+RQHADLG
Sbjct 164 PRECVLLFGQEGPGVSDDAQAQADLTVSIAQFGSTRSINAGVAAGIAMHSWVRQHADLGS 223
Query 182 AW 183
AW
Sbjct 224 AW 225
>gi|25029159|ref|NP_739213.1| putative RNA methyltransferase [Corynebacterium efficiens YS-314]
gi|259505846|ref|ZP_05748748.1| TrmH family RNA methyltransferase [Corynebacterium efficiens
YS-314]
gi|23494447|dbj|BAC19413.1| putative RNA methyltransferase [Corynebacterium efficiens YS-314]
gi|259166520|gb|EEW51074.1| TrmH family RNA methyltransferase [Corynebacterium efficiens
YS-314]
Length=230
Score = 284 bits (727), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 141/182 (78%), Positives = 152/182 (84%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LL +GD RNVVDAYRYWTREAI+ADID RRHPLHVAIENF +DANIG+VVRTANAFAV T
Sbjct 49 LLANGDRRNVVDAYRYWTREAIVADIDARRHPLHVAIENFENDANIGTVVRTANAFAVDT 108
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQ L HH LL +A LTVVA+DN PG+ LE L
Sbjct 109 VHIVGRRRWNRRGAMVTDRYQHLEHHPDVHSLLVWALRNDLTVVAIDNTPGSVPLETAQL 168
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
P CLLLFGQEGPG+TD+ARAGA +T SIAQFGSTRSINAGVAAGIAMH WIRQHADL
Sbjct 169 PERCLLLFGQEGPGVTDEARAGALMTCSIAQFGSTRSINAGVAAGIAMHTWIRQHADLEN 228
Query 182 AW 183
+W
Sbjct 229 SW 230
>gi|334697673|gb|AEG82470.1| hypothetical protein CULC809_01943 [Corynebacterium ulcerans
809]
Length=223
Score = 284 bits (726), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 138/182 (76%), Positives = 152/182 (84%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LL GD RNVVDAYRYW+R AII DIDTRRH LH+AIENF +DANIG+VVRTANAFAV T
Sbjct 42 LLESGDRRNVVDAYRYWSRPAIIKDIDTRRHALHIAIENFENDANIGTVVRTANAFAVDT 101
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQ L HH T L+++A GLT+VA+DN PG LE L
Sbjct 102 VHIVGRRRWNRRGAMVTDRYQHLMHHPDTQTLVDWALAEGLTIVAIDNTPGCVPLETAEL 161
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
P +CLLLFGQEGPG+T A+ GA +T SIAQFGSTRSINAGVAAGIAMHAWIRQHADLG+
Sbjct 162 PEKCLLLFGQEGPGVTQAAQEGALMTCSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGK 221
Query 182 AW 183
AW
Sbjct 222 AW 223
>gi|337291700|ref|YP_004630721.1| hypothetical protein CULC22_02097 [Corynebacterium ulcerans BR-AD22]
gi|334700006|gb|AEG84802.1| hypothetical protein CULC22_02097 [Corynebacterium ulcerans BR-AD22]
Length=223
Score = 284 bits (726), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 138/182 (76%), Positives = 152/182 (84%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LL GD RNVVDAYRYW+R AII DIDTRRH LH+AIENF +DANIG+VVRTANAFAV T
Sbjct 42 LLESGDRRNVVDAYRYWSRPAIIQDIDTRRHALHIAIENFENDANIGTVVRTANAFAVDT 101
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQ L HH T L+++A GLT+VA+DN PG LE L
Sbjct 102 VHIVGRRRWNRRGAMVTDRYQHLMHHPDTQTLVDWALAEGLTIVAIDNTPGCVPLETAEL 161
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
P +CLLLFGQEGPG+T A+ GA +T SIAQFGSTRSINAGVAAGIAMHAWIRQHADLG+
Sbjct 162 PEKCLLLFGQEGPGVTQAAQEGALMTCSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGK 221
Query 182 AW 183
AW
Sbjct 222 AW 223
>gi|319949900|ref|ZP_08023903.1| putative RNA methyltransferase [Dietzia cinnamea P4]
gi|319436438|gb|EFV91555.1| putative RNA methyltransferase [Dietzia cinnamea P4]
Length=227
Score = 282 bits (722), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 139/176 (79%), Positives = 151/176 (86%), Gaps = 0/176 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LL GD RNVVD YRYW REAI+AD+DTRRHP HVAIENFGHDANIG+VVRTANAF
Sbjct 50 LLDAGDRRNVVDRYRYWRREAIVADLDTRRHPFHVAIENFGHDANIGTVVRTANAFLAAE 109
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQ L HHD + L+E+AA GL VVAVDN+PGA LE +L
Sbjct 110 VHIVGRRRWNRRGAMVTDRYQHLRHHDDVSALMEWAASEGLPVVAVDNLPGAEPLEAVSL 169
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHA 177
PREC+LLFGQEGPG++DDAR AA TVSIAQFGSTRSINAGVAAGIAMHAWIR+HA
Sbjct 170 PRECVLLFGQEGPGVSDDARLRAARTVSIAQFGSTRSINAGVAAGIAMHAWIREHA 225
>gi|172041466|ref|YP_001801180.1| putative rRNA methylase [Corynebacterium urealyticum DSM 7109]
gi|171852770|emb|CAQ05746.1| putative rRNA methylase [Corynebacterium urealyticum DSM 7109]
Length=243
Score = 281 bits (720), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/182 (75%), Positives = 155/182 (86%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LL +GD RNVVDAYRYW +AI+ADID+RRH LH+AIENF +DANIG+VVRTANAFAV T
Sbjct 62 LLDNGDRRNVVDAYRYWKMDAIVADIDSRRHELHIAIENFENDANIGTVVRTANAFAVDT 121
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGR+RWNRRGAMVTDRYQ L HH + +L++AA L VVAVDN PG+ LE L
Sbjct 122 VHIVGRKRWNRRGAMVTDRYQHLEHHKTVAEVLDYAAEQDLAVVAVDNTPGSVPLETAEL 181
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
PR CLLLFGQEGPG+T++A+ GA +TVSIAQFGSTRSINAGVAAGIAMHAWIRQHADL +
Sbjct 182 PRRCLLLFGQEGPGVTEEAQRGARMTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLSQ 241
Query 182 AW 183
AW
Sbjct 242 AW 243
>gi|227489272|ref|ZP_03919588.1| RNA methyltransferase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227540862|ref|ZP_03970911.1| RNA methyltransferase [Corynebacterium glucuronolyticum ATCC
51866]
gi|227090803|gb|EEI26115.1| RNA methyltransferase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227183394|gb|EEI64366.1| RNA methyltransferase [Corynebacterium glucuronolyticum ATCC
51866]
Length=213
Score = 281 bits (720), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/182 (75%), Positives = 152/182 (84%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LL +GD RNVVDAYRYWTREAI+ DIDTRRHPLH+AIENF +D NIG+VVRTANAFAV T
Sbjct 32 LLAEGDHRNVVDAYRYWTREAIVEDIDTRRHPLHIAIENFENDMNIGTVVRTANAFAVDT 91
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQ L HHD+ L+ +A L V+A+DN+PG+ LE L
Sbjct 92 VHIVGRRRWNRRGAMVTDRYQHLMHHDTIADLISWANEQDLQVLAIDNIPGSVPLETATL 151
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
P CLLLFGQEGPG+T +A+ A +T+SIAQFGSTRSINAGVAAGIAMH WIRQHADL R
Sbjct 152 PERCLLLFGQEGPGVTPEAQDAAVMTLSIAQFGSTRSINAGVAAGIAMHTWIRQHADLSR 211
Query 182 AW 183
AW
Sbjct 212 AW 213
>gi|300859281|ref|YP_003784264.1| hypothetical protein cpfrc_01864 [Corynebacterium pseudotuberculosis
FRC41]
gi|300686735|gb|ADK29657.1| hypothetical protein cpfrc_01864 [Corynebacterium pseudotuberculosis
FRC41]
gi|302206969|gb|ADL11311.1| tRNA/rRNA methyltransferase [Corynebacterium pseudotuberculosis
C231]
gi|302331529|gb|ADL21723.1| tRNA/rRNA methyltransferase [Corynebacterium pseudotuberculosis
1002]
gi|308277220|gb|ADO27119.1| SpoU rRNA Methylase family protein [Corynebacterium pseudotuberculosis
I19]
gi|341825662|gb|AEK93183.1| tRNA/rRNA methyltransferase [Corynebacterium pseudotuberculosis
PAT10]
Length=223
Score = 281 bits (718), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 137/182 (76%), Positives = 151/182 (83%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LL GD RNVVDAYRYW+R AII DIDTRRH LHVAIENF +DANIG+VVRTANAFAV T
Sbjct 42 LLEAGDRRNVVDAYRYWSRPAIIKDIDTRRHALHVAIENFENDANIGTVVRTANAFAVDT 101
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQ L HH T L+++A GLT+VA+DN PG LE L
Sbjct 102 VHIVGRRRWNRRGAMVTDRYQHLMHHPDTQSLVDWALSEGLTIVAIDNTPGCIPLETAEL 161
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
P +C+LLFGQEGPG+T A+ GA +T SIAQFGSTRSINAGVAAGIAMH WIRQHADLG+
Sbjct 162 PEKCILLFGQEGPGVTQAAQKGALMTCSIAQFGSTRSINAGVAAGIAMHTWIRQHADLGK 221
Query 182 AW 183
AW
Sbjct 222 AW 223
>gi|336324850|ref|YP_004604816.1| putative rRNA methylase [Corynebacterium resistens DSM 45100]
gi|336100832|gb|AEI08652.1| putative rRNA methylase [Corynebacterium resistens DSM 45100]
Length=224
Score = 281 bits (718), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 138/182 (76%), Positives = 153/182 (85%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LL +GD RNVVD YRYW EAIIADIDTRRH LH+AIENF +D+NIG+VVRTANAFAV T
Sbjct 43 LLDNGDRRNVVDEYRYWRMEAIIADIDTRRHSLHIAIENFENDSNIGTVVRTANAFAVDT 102
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGR+RWNRRGAMVTDRYQ L HH + +LE+A LTVVAVDN PG+ LE L
Sbjct 103 VHIVGRKRWNRRGAMVTDRYQHLEHHPTVADVLEYARKHDLTVVAVDNTPGSVPLETADL 162
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
P+ CLLLFGQEGPG+T +A+AGA TVSIAQFGSTRSINAGVAAGIAMHAWIRQHADL +
Sbjct 163 PKRCLLLFGQEGPGVTPEAQAGATQTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLSQ 222
Query 182 AW 183
AW
Sbjct 223 AW 224
>gi|226365015|ref|YP_002782798.1| RNA methyltransferase [Rhodococcus opacus B4]
gi|226243505|dbj|BAH53853.1| putative RNA methyltransferase [Rhodococcus opacus B4]
Length=230
Score = 280 bits (717), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 142/182 (79%), Positives = 156/182 (86%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LL GD RNVVDAYRYWTREAI+ADID+RRHPLHVAIENFGHDANIG+VVRTANAFA
Sbjct 49 LLAGGDRRNVVDAYRYWTREAIVADIDSRRHPLHVAIENFGHDANIGTVVRTANAFAAAA 108
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQ + HH GL++FA LT+VAVDN PG+ LE L
Sbjct 109 VHIVGRRRWNRRGAMVTDRYQHVLHHPDVDGLVDFARERDLTIVAVDNTPGSVPLETANL 168
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
PR+C+LLFGQEGPG+TD A+ AA+TVSIAQFGSTRSINAGVAAGIAMHAW+RQHADL R
Sbjct 169 PRDCVLLFGQEGPGVTDQAKGVAAMTVSIAQFGSTRSINAGVAAGIAMHAWVRQHADLDR 228
Query 182 AW 183
AW
Sbjct 229 AW 230
>gi|68535279|ref|YP_249984.1| putative rRNA methylase [Corynebacterium jeikeium K411]
gi|68262878|emb|CAI36366.1| putative rRNA methylase [Corynebacterium jeikeium K411]
Length=227
Score = 280 bits (716), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 139/182 (77%), Positives = 151/182 (83%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LL GD RNVVDAYRYW + AIIADIDTRRH LH+AIENF +D+NIG+VVRTANAFAV T
Sbjct 46 LLDAGDTRNVVDAYRYWKQSAIIADIDTRRHALHIAIENFENDSNIGTVVRTANAFAVDT 105
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQ L HH + +LEFAA GL VVAVDN PG LE L
Sbjct 106 VHIVGRRRWNRRGAMVTDRYQHLQHHATVGEVLEFAAREGLVVVAVDNTPGCVPLETAEL 165
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
P CLLLFGQEGPG+T +A+ A +TVSIAQFGSTRSINAGVAAGIAMHAWIRQHADL +
Sbjct 166 PERCLLLFGQEGPGVTQEAQDAARMTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLSQ 225
Query 182 AW 183
AW
Sbjct 226 AW 227
>gi|296119026|ref|ZP_06837599.1| SpoU rRNA methylase family protein [Corynebacterium ammoniagenes
DSM 20306]
gi|295968124|gb|EFG81376.1| SpoU rRNA methylase family protein [Corynebacterium ammoniagenes
DSM 20306]
Length=216
Score = 280 bits (715), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 137/182 (76%), Positives = 153/182 (85%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LL +GD RNVVDAYRYWTREAI+ADIDTRRH LH+AIENF +DANIG+VVRTANAFAV+T
Sbjct 35 LLANGDRRNVVDAYRYWTREAIVADIDTRRHSLHIAIENFENDANIGTVVRTANAFAVNT 94
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQ L HHD+ T L+ +A + VVA+DN PG+ LE L
Sbjct 95 VHIVGRRRWNRRGAMVTDRYQHLEHHDTVTELMAWAREHEIAVVAIDNTPGSVPLETAQL 154
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
P CLLLFGQEGPG+T +A+ A +T SIAQFGSTRSINAGVAAGIAMH WIRQHADL R
Sbjct 155 PERCLLLFGQEGPGVTAEAQESAEMTCSIAQFGSTRSINAGVAAGIAMHTWIRQHADLSR 214
Query 182 AW 183
AW
Sbjct 215 AW 216
>gi|302531148|ref|ZP_07283490.1| RNA methyltransferase [Streptomyces sp. AA4]
gi|302440043|gb|EFL11859.1| RNA methyltransferase [Streptomyces sp. AA4]
Length=219
Score = 279 bits (713), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/182 (75%), Positives = 149/182 (82%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LL +GD RNVVDAYRYW REAI++D+DTRRHP HVAIENF HD NIG+VVRTANAFA
Sbjct 38 LLANGDRRNVVDAYRYWRREAIVSDVDTRRHPFHVAIENFQHDHNIGTVVRTANAFAAAE 97
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQ L HH+ LL FA GLTVVAVDN PGA +E L
Sbjct 98 VHIVGRRRWNRRGAMVTDRYQHLRHHEDVASLLNFATAEGLTVVAVDNTPGAEPVETAEL 157
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
PR CLLLFGQEGPG+++ A+ +A VSIAQFG+TRSINAGVAAGI MHAWIRQHADL +
Sbjct 158 PRNCLLLFGQEGPGLSEAAQTDSAKVVSIAQFGTTRSINAGVAAGIVMHAWIRQHADLSQ 217
Query 182 AW 183
AW
Sbjct 218 AW 219
>gi|260578510|ref|ZP_05846422.1| TrmH family RNA methyltransferase [Corynebacterium jeikeium ATCC
43734]
gi|258603349|gb|EEW16614.1| TrmH family RNA methyltransferase [Corynebacterium jeikeium ATCC
43734]
Length=227
Score = 279 bits (713), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/182 (77%), Positives = 151/182 (83%), Gaps = 0/182 (0%)
Query 2 LLRDGDARNVVDAYRYWTREAIIADIDTRRHPLHVAIENFGHDANIGSVVRTANAFAVHT 61
LL GD RNVVDAYRYW + AIIADIDTRRH LH+AIENF +D+NIG+VVRTANAFAV T
Sbjct 46 LLDAGDRRNVVDAYRYWKQSAIIADIDTRRHALHIAIENFENDSNIGTVVRTANAFAVDT 105
Query 62 VHIVGRRRWNRRGAMVTDRYQRLCHHDSTTGLLEFAAGAGLTVVAVDNVPGAARLEQTAL 121
VHIVGRRRWNRRGAMVTDRYQ L HH + +LEFAA GL VVAVDN PG LE L
Sbjct 106 VHIVGRRRWNRRGAMVTDRYQHLQHHATVGEVLEFAAREGLVVVAVDNTPGCVPLETAEL 165
Query 122 PRECLLLFGQEGPGITDDARAGAAVTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLGR 181
P CLLLFGQEGPG+T +A+ A +TVSIAQFGSTRSINAGVAAGIAMHAWIRQHADL +
Sbjct 166 PERCLLLFGQEGPGVTQEAQDAARMTVSIAQFGSTRSINAGVAAGIAMHAWIRQHADLSQ 225
Query 182 AW 183
AW
Sbjct 226 AW 227
Lambda K H
0.324 0.136 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 167689013960
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40