BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0381c
Length=302
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607522|ref|NP_214895.1| hypothetical protein Rv0381c [Mycob... 603 1e-170
gi|323721234|gb|EGB30294.1| hypothetical protein TMMG_03137 [Myc... 602 3e-170
gi|339630451|ref|YP_004722093.1| hypothetical protein MAF_03830 ... 601 4e-170
gi|289572966|ref|ZP_06453193.1| conserved hypothetical protein [... 597 1e-168
gi|15839765|ref|NP_334802.1| hypothetical protein MT0394 [Mycoba... 508 3e-142
gi|289568294|ref|ZP_06448521.1| hypothetical protein TBJG_03398 ... 474 8e-132
gi|296167820|ref|ZP_06850005.1| conserved hypothetical protein [... 440 1e-121
gi|240172150|ref|ZP_04750809.1| hypothetical protein MkanA1_2274... 434 6e-120
gi|118616020|ref|YP_904352.1| hypothetical protein MUL_0122 [Myc... 430 1e-118
gi|183980675|ref|YP_001848966.1| hypothetical protein MMAR_0650 ... 428 5e-118
gi|254777226|ref|ZP_05218742.1| hypothetical protein MaviaA2_215... 428 5e-118
gi|118463170|ref|YP_883916.1| hypothetical protein MAV_4789 [Myc... 427 1e-117
gi|336460402|gb|EGO39302.1| hypothetical protein MAPs_42000 [Myc... 427 1e-117
gi|254822867|ref|ZP_05227868.1| hypothetical protein MintA_23259... 426 1e-117
gi|41409956|ref|NP_962792.1| hypothetical protein MAP3858 [Mycob... 426 2e-117
gi|342859146|ref|ZP_08715800.1| hypothetical protein MCOL_09718 ... 421 8e-116
gi|120401677|ref|YP_951506.1| hypothetical protein Mvan_0662 [My... 369 2e-100
gi|145220848|ref|YP_001131526.1| hypothetical protein Mflv_0243 ... 366 3e-99
gi|315442198|ref|YP_004075077.1| hypothetical protein Mspyr1_053... 364 8e-99
gi|126433082|ref|YP_001068773.1| hypothetical protein Mjls_0470 ... 344 8e-93
gi|118469952|ref|YP_885144.1| hypothetical protein MSMEG_0738 [M... 338 5e-91
gi|108797461|ref|YP_637658.1| hypothetical protein Mmcs_0481 [My... 325 4e-87
gi|169631337|ref|YP_001704986.1| hypothetical protein MAB_4259c ... 314 1e-83
gi|333988992|ref|YP_004521606.1| hypothetical protein JDM601_035... 308 7e-82
gi|289756448|ref|ZP_06515826.1| conserved hypothetical protein [... 251 1e-64
gi|289756449|ref|ZP_06515827.1| conserved hypothetical protein [... 241 1e-61
gi|308487682|ref|XP_003106036.1| hypothetical protein CRE_20357 ... 40.4 0.30
gi|325001603|ref|ZP_08122715.1| arabinosyl transferase [Pseudono... 38.1 1.7
>gi|15607522|ref|NP_214895.1| hypothetical protein Rv0381c [Mycobacterium tuberculosis H37Rv]
gi|31791558|ref|NP_854051.1| hypothetical protein Mb0388c [Mycobacterium bovis AF2122/97]
gi|121636294|ref|YP_976517.1| hypothetical protein BCG_0419c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
67 more sequence titles
Length=302
Score = 603 bits (1555), Expect = 1e-170, Method: Compositional matrix adjust.
Identities = 301/302 (99%), Positives = 302/302 (100%), Gaps = 0/302 (0%)
Query 1 VRILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDY 60
+RILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDY
Sbjct 1 MRILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDY 60
Query 61 VLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPA 120
VLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPA
Sbjct 61 VLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPA 120
Query 121 GRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDAGLVVKTT 180
GRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDAGLVVKTT
Sbjct 121 GRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDAGLVVKTT 180
Query 181 SVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPT 240
SVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPT
Sbjct 181 SVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPT 240
Query 241 LPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWT 300
LPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWT
Sbjct 241 LPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWT 300
Query 301 SR 302
SR
Sbjct 301 SR 302
>gi|323721234|gb|EGB30294.1| hypothetical protein TMMG_03137 [Mycobacterium tuberculosis CDC1551A]
Length=302
Score = 602 bits (1551), Expect = 3e-170, Method: Compositional matrix adjust.
Identities = 300/302 (99%), Positives = 301/302 (99%), Gaps = 0/302 (0%)
Query 1 VRILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDY 60
+RILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDY
Sbjct 1 MRILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDY 60
Query 61 VLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPA 120
VLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPA
Sbjct 61 VLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPA 120
Query 121 GRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDAGLVVKTT 180
GRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDAGLVVKTT
Sbjct 121 GRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDAGLVVKTT 180
Query 181 SVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPT 240
SVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPT
Sbjct 181 SVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPT 240
Query 241 LPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWT 300
LPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVAT GTHAALWT
Sbjct 241 LPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATAGTHAALWT 300
Query 301 SR 302
SR
Sbjct 301 SR 302
>gi|339630451|ref|YP_004722093.1| hypothetical protein MAF_03830 [Mycobacterium africanum GM041182]
gi|339329807|emb|CCC25455.1| hypothetical protein MAF_03830 [Mycobacterium africanum GM041182]
Length=302
Score = 601 bits (1550), Expect = 4e-170, Method: Compositional matrix adjust.
Identities = 300/302 (99%), Positives = 301/302 (99%), Gaps = 0/302 (0%)
Query 1 VRILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDY 60
+RILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDY
Sbjct 1 MRILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDY 60
Query 61 VLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPA 120
VLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPA
Sbjct 61 VLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPA 120
Query 121 GRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDAGLVVKTT 180
GRLTGTVCLGPLKERSAVRGVYTYSPRDRI GTAAAYPAAFPVGMLPTNQNDAGLVVKTT
Sbjct 121 GRLTGTVCLGPLKERSAVRGVYTYSPRDRIQGTAAAYPAAFPVGMLPTNQNDAGLVVKTT 180
Query 181 SVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPT 240
SVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPT
Sbjct 181 SVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPT 240
Query 241 LPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWT 300
LPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWT
Sbjct 241 LPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWT 300
Query 301 SR 302
SR
Sbjct 301 SR 302
>gi|289572966|ref|ZP_06453193.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289537397|gb|EFD41975.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
Length=302
Score = 597 bits (1538), Expect = 1e-168, Method: Compositional matrix adjust.
Identities = 299/302 (99%), Positives = 300/302 (99%), Gaps = 0/302 (0%)
Query 1 VRILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDY 60
+RILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDY
Sbjct 1 MRILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDY 60
Query 61 VLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPA 120
VLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPA
Sbjct 61 VLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPA 120
Query 121 GRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDAGLVVKTT 180
GRLTGTVCLGPLKERSAVRGVYTYSPRDRI GTAAAYPAAFPVGMLPTNQNDAGLVVKTT
Sbjct 121 GRLTGTVCLGPLKERSAVRGVYTYSPRDRIQGTAAAYPAAFPVGMLPTNQNDAGLVVKTT 180
Query 181 SVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPT 240
SVSA RADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPT
Sbjct 181 SVSACRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPT 240
Query 241 LPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWT 300
LPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWT
Sbjct 241 LPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWT 300
Query 301 SR 302
SR
Sbjct 301 SR 302
>gi|15839765|ref|NP_334802.1| hypothetical protein MT0394 [Mycobacterium tuberculosis CDC1551]
gi|13879893|gb|AAK44616.1| hypothetical protein MT0394 [Mycobacterium tuberculosis CDC1551]
Length=254
Score = 508 bits (1309), Expect = 3e-142, Method: Compositional matrix adjust.
Identities = 253/254 (99%), Positives = 253/254 (99%), Gaps = 0/254 (0%)
Query 49 MSVSNLRWSGDYVLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAH 108
MSVSNLRWSGDYVLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAH
Sbjct 1 MSVSNLRWSGDYVLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAH 60
Query 109 VRDVVSPLSAPAGRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPT 168
VRDVVSPLSAPAGRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPT
Sbjct 61 VRDVVSPLSAPAGRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPT 120
Query 169 NQNDAGLVVKTTSVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAA 228
NQNDAGLVVKTTSVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAA
Sbjct 121 NQNDAGLVVKTTSVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAA 180
Query 229 RGGPMMLLAAPTLPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYAT 288
RGGPMMLLAAPTLPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYAT
Sbjct 181 RGGPMMLLAAPTLPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYAT 240
Query 289 VATVGTHAALWTSR 302
VAT GTHAALWTSR
Sbjct 241 VATAGTHAALWTSR 254
>gi|289568294|ref|ZP_06448521.1| hypothetical protein TBJG_03398 [Mycobacterium tuberculosis T17]
gi|289542047|gb|EFD45696.1| hypothetical protein TBJG_03398 [Mycobacterium tuberculosis T17]
Length=235
Score = 474 bits (1220), Expect = 8e-132, Method: Compositional matrix adjust.
Identities = 234/235 (99%), Positives = 235/235 (100%), Gaps = 0/235 (0%)
Query 1 VRILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDY 60
+RILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDY
Sbjct 1 MRILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDY 60
Query 61 VLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPA 120
VLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPA
Sbjct 61 VLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPA 120
Query 121 GRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDAGLVVKTT 180
GRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDAGLVVKTT
Sbjct 121 GRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDAGLVVKTT 180
Query 181 SVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMML 235
SVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMML
Sbjct 181 SVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMML 235
>gi|296167820|ref|ZP_06850005.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897018|gb|EFG76639.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=293
Score = 440 bits (1132), Expect = 1e-121, Method: Compositional matrix adjust.
Identities = 217/291 (75%), Positives = 242/291 (84%), Gaps = 0/291 (0%)
Query 12 AVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDYVLIDVDASPTD 71
A +L+ + GCSG S R YGAQ AR GE+LA+LGWNM+VSNLRW GD+VL+DVDAS D
Sbjct 3 ACLLALVMGCSGGSQPVRPYGAQGARFGEALALLGWNMAVSNLRWDGDFVLVDVDASAAD 62
Query 72 PHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPAGRLTGTVCLGP 131
P PHAKPEDIRFGLYGAL+HPMES LGSC A A + DV SPLSAP RLTGTVCLGP
Sbjct 63 PRGPHAKPEDIRFGLYGALSHPMESTGLGSCDRATAKMPDVRSPLSAPGDRLTGTVCLGP 122
Query 132 LKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDAGLVVKTTSVSAWRADGMQ 191
LK+RS VRGVY YSPRDRIP T+AAYPAAFPVG++PTN ND GL ++TTS+SAWRADG
Sbjct 123 LKDRSQVRGVYGYSPRDRIPNTSAAYPAAFPVGLMPTNPNDTGLAIRTTSLSAWRADGAP 182
Query 192 LGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPTLPGRGLSPACA 251
+ K QLGDP AFTG G+MLLGLE D + RYRDDSA RGGP+MLLA+PTLPG GL+PACA
Sbjct 183 VTKAQLGDPAAFTGTGFMLLGLEADGLAARYRDDSAKRGGPLMLLASPTLPGAGLNPACA 242
Query 252 TYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWTSR 302
YGSSVLILPDA LDAVH+SASLCTQGEINEALLYATVA GTHA +WT R
Sbjct 243 AYGSSVLILPDASLDAVHVSASLCTQGEINEALLYATVAVDGTHAGVWTPR 293
>gi|240172150|ref|ZP_04750809.1| hypothetical protein MkanA1_22744 [Mycobacterium kansasii ATCC
12478]
Length=296
Score = 434 bits (1117), Expect = 6e-120, Method: Compositional matrix adjust.
Identities = 238/302 (79%), Positives = 257/302 (86%), Gaps = 6/302 (1%)
Query 1 VRILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDY 60
+R+LVA VVLS L CS S+ R YGAQSAR GESL VLGWNM+VSNLRWSGDY
Sbjct 1 MRVLVALI----VVLSCL-ACSRSA-PDRIYGAQSARLGESLPVLGWNMAVSNLRWSGDY 54
Query 61 VLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPA 120
VL+DVDASP+DPHAPHAKPED+R+GLYGAL+HP+ES LGSC DAM V D+ PLSAP
Sbjct 55 VLVDVDASPSDPHAPHAKPEDVRYGLYGALSHPLESTGLGSCDDAMTKVHDIAKPLSAPP 114
Query 121 GRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDAGLVVKTT 180
RLTGTVCLGPL +RSAVRGVYTYSP DRI TAAAYPAAFPVGMLPTNQND GL VKTT
Sbjct 115 DRLTGTVCLGPLTDRSAVRGVYTYSPHDRIANTAAAYPAAFPVGMLPTNQNDTGLTVKTT 174
Query 181 SVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPT 240
S+SAWRADG + K QLGDP AFTGNGYMLLGL DA+ RYRDDSAARGGPMMLLAAPT
Sbjct 175 SLSAWRADGTPVTKIQLGDPAAFTGNGYMLLGLAADALATRYRDDSAARGGPMMLLAAPT 234
Query 241 LPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWT 300
LPGRGLSPACATYG+SVLILPDA DAVH+ ASLCTQGEIN+ALLYATVA VGTHAA+WT
Sbjct 235 LPGRGLSPACATYGASVLILPDASRDAVHVDASLCTQGEINQALLYATVAIVGTHAAVWT 294
Query 301 SR 302
SR
Sbjct 295 SR 296
>gi|118616020|ref|YP_904352.1| hypothetical protein MUL_0122 [Mycobacterium ulcerans Agy99]
gi|118568130|gb|ABL02881.1| conserved membrane protein [Mycobacterium ulcerans Agy99]
Length=297
Score = 430 bits (1106), Expect = 1e-118, Method: Compositional matrix adjust.
Identities = 224/302 (75%), Positives = 248/302 (83%), Gaps = 5/302 (1%)
Query 1 VRILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDY 60
+R L+A A + LS L CS S S YGAQ AR G++L VLGWNM VSNLRWSGDY
Sbjct 1 MRFLIALA----IALSCLVACS-RSESDLVYGAQRARFGQALPVLGWNMRVSNLRWSGDY 55
Query 61 VLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPA 120
VL++VDASPT PHAKPED+R+GLYGAL+HPME+ LGSC DAM VRD+ SPLS
Sbjct 56 VLVNVDASPTQQDTPHAKPEDVRYGLYGALSHPMEANGLGSCDDAMTKVRDIGSPLSGAQ 115
Query 121 GRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDAGLVVKTT 180
RL GTVCLGPL +RSAVRGVY YSP DRI TAAAYPAAFPVGMLPTNQND GL VKTT
Sbjct 116 DRLLGTVCLGPLTDRSAVRGVYAYSPHDRIAKTAAAYPAAFPVGMLPTNQNDTGLTVKTT 175
Query 181 SVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPT 240
S+SAWRADG L K QLGDP AFTGNG+MLLGL+VDA+ RYRDDSAARGGPMMLL +PT
Sbjct 176 SLSAWRADGTPLTKAQLGDPAAFTGNGFMLLGLQVDALVARYRDDSAARGGPMMLLTSPT 235
Query 241 LPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWT 300
LPGRGLSP+CA YGSSVLILPDA +DAV ++ASLCTQGEIN+ALLYATVA VGTHAA+WT
Sbjct 236 LPGRGLSPSCAVYGSSVLILPDASIDAVQVNASLCTQGEINDALLYATVAVVGTHAAVWT 295
Query 301 SR 302
SR
Sbjct 296 SR 297
>gi|183980675|ref|YP_001848966.1| hypothetical protein MMAR_0650 [Mycobacterium marinum M]
gi|183174001|gb|ACC39111.1| conserved membrane protein [Mycobacterium marinum M]
Length=297
Score = 428 bits (1100), Expect = 5e-118, Method: Compositional matrix adjust.
Identities = 223/302 (74%), Positives = 247/302 (82%), Gaps = 5/302 (1%)
Query 1 VRILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDY 60
+R L+A A + S L CS S S YGAQ AR G++L VLGWNM VSNLRWSGDY
Sbjct 1 MRFLIALA----IAFSCLVACS-RSESDLVYGAQRARFGQALPVLGWNMRVSNLRWSGDY 55
Query 61 VLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPA 120
VL++VDASPT PHAKPED+R+GLYGAL+HPME+ LGSC DAM VRD+ SPLS
Sbjct 56 VLVNVDASPTQQDTPHAKPEDVRYGLYGALSHPMEANGLGSCDDAMTKVRDIGSPLSGAP 115
Query 121 GRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDAGLVVKTT 180
RL GTVCLGPL +RSAVRGVY YSP DRI TAAAYPAAFPVGMLPTNQND GL VKTT
Sbjct 116 DRLLGTVCLGPLTDRSAVRGVYAYSPHDRIAKTAAAYPAAFPVGMLPTNQNDTGLTVKTT 175
Query 181 SVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPT 240
S+SAWRADG L K QLGDP AFTGNG+MLLGL+VDA+ RYRDDSAARGGPMMLL +PT
Sbjct 176 SLSAWRADGTPLTKAQLGDPAAFTGNGFMLLGLQVDALAARYRDDSAARGGPMMLLTSPT 235
Query 241 LPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWT 300
LPGRGLSP+CA YGSSVLILPDA +DAV ++ASLCTQGEIN+ALLYATVA VGTHAA+WT
Sbjct 236 LPGRGLSPSCAVYGSSVLILPDASMDAVQVNASLCTQGEINDALLYATVAVVGTHAAVWT 295
Query 301 SR 302
SR
Sbjct 296 SR 297
>gi|254777226|ref|ZP_05218742.1| hypothetical protein MaviaA2_21514 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=303
Score = 428 bits (1100), Expect = 5e-118, Method: Compositional matrix adjust.
Identities = 213/292 (73%), Positives = 240/292 (83%), Gaps = 1/292 (0%)
Query 12 AVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDYVLIDVDASPTD 71
A +L+ +T CS + R YGAQ AR GE+LA+LGWNMS+SNLRW GDYVL+DVDASP
Sbjct 12 ACLLACVTACSNPHPAARPYGAQGARLGEALALLGWNMSLSNLRWDGDYVLVDVDASPAS 71
Query 72 PHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPAGRLTGTVCLGP 131
PHAKPEDIRFGLYGALAHPME+A LGSC +RDV +PLSAP RLTGTVCLGP
Sbjct 72 AKGPHAKPEDIRFGLYGALAHPMEAAGLGSCDSTTTSLRDVPAPLSAPPDRLTGTVCLGP 131
Query 132 LKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDA-GLVVKTTSVSAWRADGM 190
LK+RS VRGVY YSPRDRIP +++AYP AFPVG+LPTN ND+ GL VKT S+SAWRADG
Sbjct 132 LKDRSQVRGVYGYSPRDRIPNSSSAYPVAFPVGLLPTNPNDSGGLAVKTASLSAWRADGT 191
Query 191 QLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPTLPGRGLSPAC 250
+ K QLGDP AFTGNGYMLLGLE AV RYRD+S RGGPMMLLA+PTLPGRGL+PAC
Sbjct 192 PVTKAQLGDPGAFTGNGYMLLGLEATAVAARYRDESVQRGGPMMLLASPTLPGRGLNPAC 251
Query 251 ATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWTSR 302
A YGSSVLILPDA LDAVH++ASLCTQGEIN+ALLYAT+A GTHA +WT R
Sbjct 252 AAYGSSVLILPDASLDAVHVNASLCTQGEINDALLYATLAIDGTHAGVWTQR 303
>gi|118463170|ref|YP_883916.1| hypothetical protein MAV_4789 [Mycobacterium avium 104]
gi|118164457|gb|ABK65354.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=286
Score = 427 bits (1097), Expect = 1e-117, Method: Compositional matrix adjust.
Identities = 211/286 (74%), Positives = 236/286 (83%), Gaps = 1/286 (0%)
Query 18 LTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDYVLIDVDASPTDPHAPHA 77
+T CS + R YGAQ AR GE+LA+LGWNMS+SNLRW GDYVL+DVDASP PHA
Sbjct 1 MTACSNPHPAARPYGAQGARLGEALALLGWNMSLSNLRWDGDYVLVDVDASPASAKGPHA 60
Query 78 KPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPAGRLTGTVCLGPLKERSA 137
KPEDIRFGLYGALAHPME+A LGSC +RDV +PLSAP RLTGTVCLGPLK+RS
Sbjct 61 KPEDIRFGLYGALAHPMEAAGLGSCDSTTTSLRDVPAPLSAPPDRLTGTVCLGPLKDRSQ 120
Query 138 VRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDA-GLVVKTTSVSAWRADGMQLGKPQ 196
VRGVY YSPRDRIP +++AYP AFPVG+LPTN ND+ GL VKT S+SAWRADG + K Q
Sbjct 121 VRGVYGYSPRDRIPNSSSAYPVAFPVGLLPTNPNDSGGLAVKTASLSAWRADGTPVTKAQ 180
Query 197 LGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPTLPGRGLSPACATYGSS 256
LGDP AFTGNGYMLLGLE AV RYRD+S RGGPMMLLA+PTLPGRGL+PACA YGSS
Sbjct 181 LGDPGAFTGNGYMLLGLEATAVAARYRDESVQRGGPMMLLASPTLPGRGLNPACAAYGSS 240
Query 257 VLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWTSR 302
VLILPDA LDAVH++ASLCTQGEIN+ALLYAT+A GTHA +WT R
Sbjct 241 VLILPDASLDAVHVNASLCTQGEINDALLYATLAIDGTHAGVWTQR 286
>gi|336460402|gb|EGO39302.1| hypothetical protein MAPs_42000 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=293
Score = 427 bits (1097), Expect = 1e-117, Method: Compositional matrix adjust.
Identities = 213/292 (73%), Positives = 238/292 (82%), Gaps = 1/292 (0%)
Query 12 AVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDYVLIDVDASPTD 71
A +L+ +T CS + R YGAQ AR GESLA+LGWNMSVSNLRW GDYVL+DVDASP
Sbjct 2 ACLLACVTACSNPHPAARPYGAQGARLGESLALLGWNMSVSNLRWDGDYVLVDVDASPAS 61
Query 72 PHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPAGRLTGTVCLGP 131
PHAKPEDIRFGLYGALAHPME+ LGSC + DV +PLSAP RLTGTVCLGP
Sbjct 62 AKGPHAKPEDIRFGLYGALAHPMEATGLGSCDSTTTSLHDVPAPLSAPPDRLTGTVCLGP 121
Query 132 LKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDA-GLVVKTTSVSAWRADGM 190
LK+RS VRGVY YSPRDRIP +++AYP AFPVG+LPTN ND+ GL VKT S+SAWRADG
Sbjct 122 LKDRSQVRGVYGYSPRDRIPNSSSAYPVAFPVGLLPTNPNDSGGLAVKTASLSAWRADGT 181
Query 191 QLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPTLPGRGLSPAC 250
+ K QLGDP AFTGNGYMLLGLE AV RYRD+S RGGPMMLLA+PTLPGRGL+PAC
Sbjct 182 PVTKAQLGDPGAFTGNGYMLLGLEATAVAARYRDESVQRGGPMMLLASPTLPGRGLNPAC 241
Query 251 ATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWTSR 302
A YGSSVLILPDA LDAVH++ASLCTQGEIN+ALLYAT+A GTHA +WT R
Sbjct 242 AAYGSSVLILPDASLDAVHVNASLCTQGEINDALLYATLAIDGTHAGVWTQR 293
>gi|254822867|ref|ZP_05227868.1| hypothetical protein MintA_23259 [Mycobacterium intracellulare
ATCC 13950]
Length=300
Score = 426 bits (1096), Expect = 1e-117, Method: Compositional matrix adjust.
Identities = 214/303 (71%), Positives = 247/303 (82%), Gaps = 4/303 (1%)
Query 1 VRILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDY 60
+R ++A A C A+ L+G CS ++ + YGAQ AR GESLA+LGWNMSVSNLRW GDY
Sbjct 1 MRTILAIAACLALCLAG---CSSTNPAAAPYGAQGARLGESLALLGWNMSVSNLRWDGDY 57
Query 61 VLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPA 120
VL+DVDASP PHAKPEDIRFGLYGALAHPME+ LGSC +A V D+ +PLSAP
Sbjct 58 VLVDVDASPASTKDPHAKPEDIRFGLYGALAHPMEADGLGSCENAKTGVHDIRAPLSAPP 117
Query 121 GRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDA-GLVVKT 179
RLTGTVCLGPLK+RS VRG+Y YSPRDRIP +++AYP AFPVG+LPTN ND+ GL VKT
Sbjct 118 DRLTGTVCLGPLKDRSQVRGIYGYSPRDRIPNSSSAYPVAFPVGLLPTNPNDSGGLAVKT 177
Query 180 TSVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAP 239
S++AWRADG + K QLGDP AFTGNGYMLLGLE A+ RYRD+SA RGGPMMLLA+P
Sbjct 178 ASLTAWRADGKPVTKVQLGDPGAFTGNGYMLLGLEATAIAARYRDESAKRGGPMMLLASP 237
Query 240 TLPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALW 299
TLP GL+PACATYGSSVLILPDA LDAVH++ASLCTQGEIN+ALLYAT+A GTHA +W
Sbjct 238 TLPAPGLNPACATYGSSVLILPDASLDAVHVNASLCTQGEINDALLYATLAIDGTHAGVW 297
Query 300 TSR 302
T R
Sbjct 298 TQR 300
>gi|41409956|ref|NP_962792.1| hypothetical protein MAP3858 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398789|gb|AAS06408.1| hypothetical protein MAP_3858 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=303
Score = 426 bits (1095), Expect = 2e-117, Method: Compositional matrix adjust.
Identities = 213/292 (73%), Positives = 238/292 (82%), Gaps = 1/292 (0%)
Query 12 AVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDYVLIDVDASPTD 71
A +L+ +T CS + R YGAQ AR GESLA+LGWNMSVSNLRW GDYVL+DVDASP
Sbjct 12 ACLLACVTACSNPHPAARPYGAQGARLGESLALLGWNMSVSNLRWDGDYVLVDVDASPAS 71
Query 72 PHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPAGRLTGTVCLGP 131
PHAKPEDIRFGLYGALAHPME+ LGSC + DV +PLSAP RLTGTVCLGP
Sbjct 72 AKGPHAKPEDIRFGLYGALAHPMEATGLGSCDSTTTSLHDVPAPLSAPPDRLTGTVCLGP 131
Query 132 LKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDA-GLVVKTTSVSAWRADGM 190
LK+RS VRGVY YSPRDRIP +++AYP AFPVG+LPTN ND+ GL VKT S+SAWRADG
Sbjct 132 LKDRSQVRGVYGYSPRDRIPNSSSAYPVAFPVGLLPTNPNDSGGLAVKTASLSAWRADGT 191
Query 191 QLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPTLPGRGLSPAC 250
+ K QLGDP AFTGNGYMLLGLE AV RYRD+S RGGPMMLLA+PTLPGRGL+PAC
Sbjct 192 PVTKAQLGDPGAFTGNGYMLLGLEATAVAARYRDESVQRGGPMMLLASPTLPGRGLNPAC 251
Query 251 ATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWTSR 302
A YGSSVLILPDA LDAVH++ASLCTQGEIN+ALLYAT+A GTHA +WT R
Sbjct 252 AAYGSSVLILPDASLDAVHVNASLCTQGEINDALLYATLAIDGTHAGVWTQR 303
>gi|342859146|ref|ZP_08715800.1| hypothetical protein MCOL_09718 [Mycobacterium colombiense CECT
3035]
gi|342133387|gb|EGT86590.1| hypothetical protein MCOL_09718 [Mycobacterium colombiense CECT
3035]
Length=276
Score = 421 bits (1082), Expect = 8e-116, Method: Compositional matrix adjust.
Identities = 209/275 (76%), Positives = 233/275 (85%), Gaps = 1/275 (0%)
Query 29 RTYGAQSARTGESLAVLGWNMSVSNLRWSGDYVLIDVDASPTDPHAPHAKPEDIRFGLYG 88
R YGAQ AR GESLA+LGWNMSVSNLRW G+YVL+DVDASPT PHAKPEDIRFGLYG
Sbjct 2 RPYGAQGARFGESLALLGWNMSVSNLRWDGEYVLVDVDASPTSAKDPHAKPEDIRFGLYG 61
Query 89 ALAHPMESAALGSCGDAMAHVRDVVSPLSAPAGRLTGTVCLGPLKERSAVRGVYTYSPRD 148
ALAHPME A LGSC A RD+ +PLSAP RLTGTVCLGPLK+RS VRGVY YSPRD
Sbjct 62 ALAHPMEVAGLGSCDAAKISARDIPAPLSAPRDRLTGTVCLGPLKDRSQVRGVYGYSPRD 121
Query 149 RIPGTAAAYPAAFPVGMLPTNQNDA-GLVVKTTSVSAWRADGMQLGKPQLGDPVAFTGNG 207
RIP +++AYP AFPVG+LPTN ND+ GL VKT S+SAWRADG + K QLGDP AFTGNG
Sbjct 122 RIPNSSSAYPVAFPVGLLPTNPNDSGGLAVKTASLSAWRADGTPVTKTQLGDPGAFTGNG 181
Query 208 YMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPTLPGRGLSPACATYGSSVLILPDALLDA 267
YMLLG+E A+ RYRD+SAARGGPMMLLA+PTLPG GL+PACATYGSSVLILPDA LD+
Sbjct 182 YMLLGVEATAIAARYRDESAARGGPMMLLASPTLPGPGLNPACATYGSSVLILPDASLDS 241
Query 268 VHISASLCTQGEINEALLYATVATVGTHAALWTSR 302
VH++ASLCTQGEIN+ALLYAT+A GTHA +WT R
Sbjct 242 VHVNASLCTQGEINDALLYATLAIDGTHAGVWTQR 276
>gi|120401677|ref|YP_951506.1| hypothetical protein Mvan_0662 [Mycobacterium vanbaalenii PYR-1]
gi|119954495|gb|ABM11500.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=297
Score = 369 bits (948), Expect = 2e-100, Method: Compositional matrix adjust.
Identities = 187/289 (65%), Positives = 216/289 (75%), Gaps = 4/289 (1%)
Query 14 VLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDYVLIDVDASPTDPH 73
+L +T CS + A +A+ GESLA+LGWNMSVSNLR+ + VLIDVDASP
Sbjct 10 LLLAVTSCSEPQRRDDVFSAATAKIGESLAILGWNMSVSNLRFDAENVLIDVDASPAAEG 69
Query 74 APHAKPEDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPA-GRLTGTVCLGPL 132
PHA PEDIRFGLYGALAHP+E+ ALG C D + + PLSAP RLTGTVCLGPL
Sbjct 70 EPHAAPEDIRFGLYGALAHPLEANALGGCRDVTSLD---IQPLSAPTPDRLTGTVCLGPL 126
Query 133 KERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDAGLVVKTTSVSAWRADGMQL 192
++RS VRGVY YSPRDR+PGT AYPAAFPVG+ PT D GL +KTTSV A+RADG +L
Sbjct 127 RDRSQVRGVYVYSPRDRMPGTTVAYPAAFPVGLPPTTGTDTGLALKTTSVDAFRADGAKL 186
Query 193 GKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPTLPGRGLSPACAT 252
LGDP AF G+GYMLLGLE+ + RYRDDSA RGGPMM+L APT PG+GLS AC
Sbjct 187 SPTALGDPAAFQGDGYMLLGLEISGLAARYRDDSAQRGGPMMVLTAPTRPGKGLSHACDV 246
Query 253 YGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWTS 301
YGSSVL+LPDA D+V + SLCTQGEIN ALLYATV+ GTHAALWT+
Sbjct 247 YGSSVLVLPDAARDSVQVGVSLCTQGEINAALLYATVSLTGTHAALWTT 295
>gi|145220848|ref|YP_001131526.1| hypothetical protein Mflv_0243 [Mycobacterium gilvum PYR-GCK]
gi|145213334|gb|ABP42738.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=300
Score = 366 bits (939), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 183/282 (65%), Positives = 217/282 (77%), Gaps = 4/282 (1%)
Query 21 CSGSSHSGR-TYGAQSARTGESLAVLGWNMSVSNLRWSGDYVLIDVDASPTDPHAPHAKP 79
CSG S R + +A GES +LGWNMSV+NLR+ +YVL+DVDA+P PHA P
Sbjct 19 CSGDSADRRDVFSVPTATLGESQTLLGWNMSVANLRFEAEYVLVDVDAAPAREGEPHAAP 78
Query 80 EDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPAGRLTGTVCLGPLKERSAVR 139
ED+RFGLYGAL HP+E+ LGSC D + V+P+SA R++GTVC+GPL++RS VR
Sbjct 79 EDLRFGLYGALVHPLEADGLGSCEDVTSLG---VNPVSASPDRMSGTVCIGPLRDRSQVR 135
Query 140 GVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDAGLVVKTTSVSAWRADGMQLGKPQLGD 199
GVY YSPRDRI T AYPAAFPVG+LPTN ++ GL VKT+SV A+RADG QL LGD
Sbjct 136 GVYAYSPRDRIAETTVAYPAAFPVGVLPTNSSETGLSVKTSSVDAFRADGAQLNPTALGD 195
Query 200 PVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPTLPGRGLSPACATYGSSVLI 259
P AFTGNGYMLLGLEVD + RYRDDSA RGGPMM+L APT+PG+GLS AC YGSSVL+
Sbjct 196 PAAFTGNGYMLLGLEVDGLAARYRDDSAQRGGPMMVLTAPTIPGKGLSHACDVYGSSVLV 255
Query 260 LPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWTS 301
LP+A +AV + ASLCTQGEIN ALLYATV+ VGTHAALWT+
Sbjct 256 LPEASREAVQLRASLCTQGEINAALLYATVSLVGTHAALWTT 297
>gi|315442198|ref|YP_004075077.1| hypothetical protein Mspyr1_05330 [Mycobacterium sp. Spyr1]
gi|315260501|gb|ADT97242.1| hypothetical protein Mspyr1_05330 [Mycobacterium sp. Spyr1]
Length=300
Score = 364 bits (935), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 183/282 (65%), Positives = 217/282 (77%), Gaps = 4/282 (1%)
Query 21 CSGSSHSGR-TYGAQSARTGESLAVLGWNMSVSNLRWSGDYVLIDVDASPTDPHAPHAKP 79
CSG S R + +A GES +LGWNMSV+NLR+ +YVL+DVDA+P PHA P
Sbjct 19 CSGDSADRRDVFLVPTATLGESQTLLGWNMSVANLRFEAEYVLVDVDAAPAREGEPHAAP 78
Query 80 EDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPAGRLTGTVCLGPLKERSAVR 139
ED+RFGLYGAL HP+E+ LGSC D + V+P+SA R++GTVC+GPL++RS VR
Sbjct 79 EDLRFGLYGALVHPLEADGLGSCEDVTSLG---VNPVSASPDRMSGTVCIGPLRDRSQVR 135
Query 140 GVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDAGLVVKTTSVSAWRADGMQLGKPQLGD 199
GVY YSPRDRI T AYPAAFPVG+LPTN ++ GL VKT+SV A+RADG QL LGD
Sbjct 136 GVYAYSPRDRIAETTVAYPAAFPVGVLPTNSSETGLSVKTSSVDAFRADGAQLNPTALGD 195
Query 200 PVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPTLPGRGLSPACATYGSSVLI 259
P AFTGNGYMLLGLEVD + RYRDDSA RGGPMM+L APT+PG+GLS AC YGSSVL+
Sbjct 196 PAAFTGNGYMLLGLEVDGLAARYRDDSAQRGGPMMVLTAPTIPGKGLSHACDVYGSSVLV 255
Query 260 LPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWTS 301
LP+A +AV + ASLCTQGEIN ALLYATV+ VGTHAALWT+
Sbjct 256 LPEASREAVQLRASLCTQGEINAALLYATVSLVGTHAALWTT 297
>gi|126433082|ref|YP_001068773.1| hypothetical protein Mjls_0470 [Mycobacterium sp. JLS]
gi|126232882|gb|ABN96282.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=298
Score = 344 bits (883), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 172/283 (61%), Positives = 219/283 (78%), Gaps = 5/283 (1%)
Query 20 GCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDYVLIDVDASPTDPHAPHAKP 79
GCS + TY A +A+ GESLAV GWN+SVSNLR+ D+VL+DVDAS + P A P
Sbjct 18 GCSKAEGRSDTYSAPTAKVGESLAVSGWNISVSNLRFEADHVLVDVDASHSGEGEPVA-P 76
Query 80 EDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPA-GRLTGTVCLGPLKERSAV 138
E +RFGLYGAL HP+E+ LGSC + A V+P+SAP+ RL+GTVCLGP +++S V
Sbjct 77 ESLRFGLYGALVHPIEANGLGSCQNVDALN---VNPVSAPSPDRLSGTVCLGPQRDQSQV 133
Query 139 RGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDAGLVVKTTSVSAWRADGMQLGKPQLG 198
RG+Y YSP+DR+ GT AY AAFPVG+LPT + GL +KTTS+ A+RADG QL + LG
Sbjct 134 RGIYAYSPQDRMAGTTVAYAAAFPVGLLPTRDTETGLTLKTTSLDAFRADGAQLNQAALG 193
Query 199 DPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPTLPGRGLSPACATYGSSVL 258
DP AF+GNGYMLLGL++D + RYR+DS RGGP+M++ APTLPG+GLS ACA YG+SVL
Sbjct 194 DPEAFSGNGYMLLGLQIDGLASRYREDSMRRGGPLMVVVAPTLPGKGLSYACAAYGASVL 253
Query 259 ILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWTS 301
+LP+A +AV++ ASLCTQGEIN ALL+A+V+ VGTHAALWT+
Sbjct 254 VLPEASREAVNMRASLCTQGEINRALLFASVSVVGTHAALWTT 296
>gi|118469952|ref|YP_885144.1| hypothetical protein MSMEG_0738 [Mycobacterium smegmatis str.
MC2 155]
gi|118171239|gb|ABK72135.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=300
Score = 338 bits (868), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 174/304 (58%), Positives = 223/304 (74%), Gaps = 7/304 (2%)
Query 1 VRILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDY 60
+R L+A T +V++ T CS RTY A + G++L +LGW++++S+LR+ D
Sbjct 1 MRALIAVVTTLMLVVT--TACSDDHTPTRTYEALTTTVGQALDILGWHITLSDLRFEADR 58
Query 61 VLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGD--AMAHVRDVVSPLSA 118
VL+DVDA+P+ AKPED+RFGLYGALAHP+E+ +G+C D ++A SP
Sbjct 59 VLVDVDATPSADQ--RAKPEDLRFGLYGALAHPIEATGIGACSDVPSLALQPLAASPAQN 116
Query 119 PAGRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDAGLVVK 178
P +L+GTVCLGP +++S VRGVY YSPRDRI GT AY AAFPVG+LPTN ND GL +K
Sbjct 117 P-DKLSGTVCLGPQRDQSQVRGVYVYSPRDRISGTTVAYAAAFPVGVLPTNPNDTGLSIK 175
Query 179 TTSVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAA 238
TTSV + ADG QL LG+P AF+GNGYMLLGLE+ + RYRDDSA RGGP+M++AA
Sbjct 176 TTSVDGFSADGAQLAPTALGEPEAFSGNGYMLLGLEITGLAQRYRDDSAQRGGPLMVVAA 235
Query 239 PTLPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAAL 298
PTLP GLS AC+ YGSSVL+LPDA + V++ ASLCTQGEIN ALLYA+V+ +GTHAAL
Sbjct 236 PTLPPPGLSHACSVYGSSVLVLPDASREGVNMRASLCTQGEINAALLYASVSVIGTHAAL 295
Query 299 WTSR 302
WT+
Sbjct 296 WTNH 299
>gi|108797461|ref|YP_637658.1| hypothetical protein Mmcs_0481 [Mycobacterium sp. MCS]
gi|119866546|ref|YP_936498.1| hypothetical protein Mkms_0492 [Mycobacterium sp. KMS]
gi|108767880|gb|ABG06602.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119692635|gb|ABL89708.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=298
Score = 325 bits (834), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 169/283 (60%), Positives = 216/283 (77%), Gaps = 5/283 (1%)
Query 20 GCSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDYVLIDVDASPTDPHAPHAKP 79
GCS + TY A +A+ GESLAV GWN+SVSNLR+ D+VL+DVDAS + P
Sbjct 18 GCSKAEGRSDTYSAPTAKVGESLAVSGWNISVSNLRFEADHVLVDVDASHSG-EGESVAP 76
Query 80 EDIRFGLYGALAHPMESAALGSCGDAMAHVRDVVSPLSAPA-GRLTGTVCLGPLKERSAV 138
E +RFGLYGAL HP+E+ LGSC + A V+P+SAP+ RL+GTVCLGP +++S V
Sbjct 77 ESLRFGLYGALVHPIEANGLGSCQNVDALN---VNPMSAPSPDRLSGTVCLGPQRDQSQV 133
Query 139 RGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDAGLVVKTTSVSAWRADGMQLGKPQLG 198
RG+Y YSP+DR+ GT AY AAFPVG+LPT + GL + TTS+ A+RADG QL + LG
Sbjct 134 RGIYAYSPQDRMAGTTVAYAAAFPVGLLPTRDTETGLTLTTTSLDAFRADGAQLNQAALG 193
Query 199 DPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPTLPGRGLSPACATYGSSVL 258
DP AF+GNGYMLLGL++D + RYR+DS RGGP+M++ APTLPG+GLS ACA YG+SVL
Sbjct 194 DPEAFSGNGYMLLGLQIDGLASRYREDSMRRGGPLMVVVAPTLPGKGLSYACAAYGASVL 253
Query 259 ILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWTS 301
+LP+A +AV++ ASLCTQGEIN ALL+A+V+ VGTHAALWT+
Sbjct 254 VLPEASREAVNMRASLCTQGEINRALLFASVSVVGTHAALWTT 296
>gi|169631337|ref|YP_001704986.1| hypothetical protein MAB_4259c [Mycobacterium abscessus ATCC
19977]
gi|169243304|emb|CAM64332.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=300
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 156/285 (55%), Positives = 201/285 (71%), Gaps = 8/285 (2%)
Query 21 CSGSSHSGRTYGAQSARTGESLAVLGWNMSVSNLRWSGDYVLIDVDASPTDPHAPHAKPE 80
CS YGAQSA+ GE+ ++LGWN+SV+NLR+ YVLIDV + +
Sbjct 20 CSKEPEKQLVYGAQSAKIGETQSLLGWNLSVANLRFQNGYVLIDVTGAAARAGDKPSPAA 79
Query 81 DIRFGLYGALAHPMESAALGSCG---DAMAHVRDVVSPLSAPAGRLTGTVCLGPLKERSA 137
++RFGLYG+L+HP+E+ AL C D H V++P +L+GTVCLGP++ +SA
Sbjct 80 ELRFGLYGSLSHPLEAPALSGCAGLADLSIHPLAVLAP-----DQLSGTVCLGPMQNQSA 134
Query 138 VRGVYTYSPRDRIPGTAAAYPAAFPVGMLPTNQNDAGLVVKTTSVSAWRADGMQLGKPQL 197
VRGVY YS +DRI GT AYP A+P+G+LPT QND+GLV+ T S+ AWRA G Q+ + L
Sbjct 135 VRGVYAYSAKDRIAGTTVAYPVAYPMGLLPTPQNDSGLVITTKSMEAWRASGQQISQVDL 194
Query 198 GDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPTLPGRGLSPACATYGSSV 257
GDP AFTGNGY LLGL + V RYRD+SAARGGP+M+ APTLPG GL +CA YG+SV
Sbjct 195 GDPNAFTGNGYSLLGLNISGVAARYRDESAARGGPLMVTVAPTLPGPGLPRSCAVYGASV 254
Query 258 LILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAALWTSR 302
L+LPDA LDAV + SLC QGEIN A+L T++ +GTHAA+W +R
Sbjct 255 LVLPDAALDAVQLQPSLCLQGEINAAVLAGTLSVIGTHAAVWMNR 299
>gi|333988992|ref|YP_004521606.1| hypothetical protein JDM601_0352 [Mycobacterium sp. JDM601]
gi|333484960|gb|AEF34352.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=297
Score = 308 bits (789), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 161/272 (60%), Positives = 196/272 (73%), Gaps = 4/272 (1%)
Query 31 YGAQSARTGESLAVLGWNMSVSNLRWSGDYVLIDVDASPTDPHAPHAKPEDIRFGLYGAL 90
YGAQ AR GE+L +LGW ++++NLRW D+VLIDV A DP PHA ++RFG+YG
Sbjct 28 YGAQGARIGEALPLLGWELTLTNLRWEVDHVLIDVKAHVPDPGGPHAAAGEMRFGIYGTP 87
Query 91 AHPMESAALGSCGDAMAHVRDVVSPLSA-PAGRLTGTVCLGPLKERSAVRGVYTYSPRDR 149
A P+E+ LGSC DA+ + +PLS RL GTVCLGPLKERSAVRGVY YSP DR
Sbjct 88 ARPVEATGLGSC-DALGQLTP--APLSTREPDRLDGTVCLGPLKERSAVRGVYAYSPADR 144
Query 150 IPGTAAAYPAAFPVGMLPTNQNDAGLVVKTTSVSAWRADGMQLGKPQLGDPVAFTGNGYM 209
I T AYPAAFPVG+ P N D GLV+ V+A+RADG+ L LGDP AF+GNGYM
Sbjct 145 IKDTTVAYPAAFPVGLPPINPYDTGLVLTPQGVAAYRADGVPLAPSALGDPKAFSGNGYM 204
Query 210 LLGLEVDAVPDRYRDDSAARGGPMMLLAAPTLPGRGLSPACATYGSSVLILPDALLDAVH 269
+L L DAV +YRDD+ ARGGP+ML+A P P GL P C GSSVLILP+A L++VH
Sbjct 205 VLSLAADAVAGQYRDDADARGGPLMLVAGPATPMPGLGPDCLASGSSVLILPEASLNSVH 264
Query 270 ISASLCTQGEINEALLYATVATVGTHAALWTS 301
+ SLCT GEIN A+LYA+V+ VGTHAA+WT+
Sbjct 265 VPTSLCTHGEINAAVLYASVSVVGTHAAVWTT 296
>gi|289756448|ref|ZP_06515826.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289712012|gb|EFD76024.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length=127
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/127 (99%), Positives = 126/127 (99%), Gaps = 0/127 (0%)
Query 176 VVKTTSVSAWRADGMQLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMML 235
+VKTTSVSAWRADGM LGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMML
Sbjct 1 MVKTTSVSAWRADGMHLGKPQLGDPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMML 60
Query 236 LAAPTLPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTH 295
LAAPTLPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTH
Sbjct 61 LAAPTLPGRGLSPACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTH 120
Query 296 AALWTSR 302
AALWTSR
Sbjct 121 AALWTSR 127
>gi|289756449|ref|ZP_06515827.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289712013|gb|EFD76025.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length=118
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/118 (100%), Positives = 118/118 (100%), Gaps = 0/118 (0%)
Query 49 MSVSNLRWSGDYVLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAH 108
MSVSNLRWSGDYVLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAH
Sbjct 1 MSVSNLRWSGDYVLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALGSCGDAMAH 60
Query 109 VRDVVSPLSAPAGRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGML 166
VRDVVSPLSAPAGRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGML
Sbjct 61 VRDVVSPLSAPAGRLTGTVCLGPLKERSAVRGVYTYSPRDRIPGTAAAYPAAFPVGML 118
>gi|308487682|ref|XP_003106036.1| hypothetical protein CRE_20357 [Caenorhabditis remanei]
gi|308254610|gb|EFO98562.1| hypothetical protein CRE_20357 [Caenorhabditis remanei]
Length=856
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/72 (30%), Positives = 33/72 (46%), Gaps = 1/72 (1%)
Query 222 YRDDSAARGGPMMLLAAPTLPGRGLSPACATYGSSVLILPDALLDAVHISASLCT-QGEI 280
Y D+ R P+M + P +P +G+SP+ A G ++ P L+ H S QG
Sbjct 490 YESDAQNRASPVMPIMMPQMPQQGVSPSSAVQGPHIIPTPVGLVQVQHFPRSQHHLQGNA 549
Query 281 NEALLYATVATV 292
N + L V +
Sbjct 550 NNSFLQPGVIQI 561
>gi|325001603|ref|ZP_08122715.1| arabinosyl transferase [Pseudonocardia sp. P1]
Length=847
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/81 (38%), Positives = 41/81 (51%), Gaps = 5/81 (6%)
Query 151 PGTAAAYPAAFPVGMLPTNQNDAGLVVKTTSVSAWRADGMQLGKPQLGDPVAFTGNGYML 210
PG + A PA P G++P N +A L+ T+ S +R DG+ P G +G Y+L
Sbjct 527 PGESTATPAPLPPGVVPANSPEAQLLEPTSGGSGFRRDGV----PPTGGGSGVSGFEYVL 582
Query 211 L-GLEVDAVPDRYRDDSAARG 230
GL DA P DS+ RG
Sbjct 583 SGGLGSDAAPAFGSYDSSGRG 603
Lambda K H
0.317 0.133 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 505781532318
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40