BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0383c
Length=284
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607524|ref|NP_214897.1| hypothetical protein Rv0383c [Mycob... 575 2e-162
gi|289748867|ref|ZP_06508245.1| conserved secreted protein [Myco... 531 4e-149
gi|306970581|ref|ZP_07483242.1| conserved secreted protein [Myco... 497 9e-139
gi|289760494|ref|ZP_06519872.1| conserved hypothetical protein [... 477 9e-133
gi|183980672|ref|YP_001848963.1| hypothetical protein MMAR_0647 ... 471 7e-131
gi|118616023|ref|YP_904355.1| hypothetical protein MUL_0125 [Myc... 470 9e-131
gi|41409953|ref|NP_962789.1| hypothetical protein MAP3855 [Mycob... 469 2e-130
gi|306787380|ref|ZP_07425702.1| hypothetical protein TMDG_02578 ... 469 2e-130
gi|240172147|ref|ZP_04750806.1| putative secreted protein [Mycob... 468 3e-130
gi|342859149|ref|ZP_08715803.1| hypothetical protein MCOL_09733 ... 466 2e-129
gi|289441762|ref|ZP_06431506.1| conserved hypothetical protein [... 460 1e-127
gi|15828344|ref|NP_302607.1| hypothetical protein ML2489 [Mycoba... 458 5e-127
gi|118470708|ref|YP_885142.1| hypothetical protein MSMEG_0736 [M... 413 2e-113
gi|294995140|ref|ZP_06800831.1| secreted protein [Mycobacterium ... 410 2e-112
gi|254777229|ref|ZP_05218745.1| hypothetical protein MaviaA2_215... 399 2e-109
gi|108797459|ref|YP_637656.1| hypothetical protein Mmcs_0479 [My... 394 1e-107
gi|307082867|ref|ZP_07491980.1| hypothetical protein TMLG_01805 ... 388 6e-106
gi|120401675|ref|YP_951504.1| hypothetical protein Mvan_0660 [My... 386 2e-105
gi|254820197|ref|ZP_05225198.1| hypothetical protein MintA_09731... 382 3e-104
gi|296167816|ref|ZP_06850002.1| conserved hypothetical protein [... 367 8e-100
gi|333988989|ref|YP_004521603.1| hypothetical protein JDM601_034... 365 4e-99
gi|315442196|ref|YP_004075075.1| hypothetical protein Mspyr1_053... 365 6e-99
gi|169631342|ref|YP_001704991.1| hypothetical protein MAB_4264c ... 318 6e-85
gi|254549326|ref|ZP_05139773.1| secreted protein [Mycobacterium ... 222 4e-56
gi|325673846|ref|ZP_08153536.1| hypothetical protein HMPREF0724_... 198 6e-49
gi|312141317|ref|YP_004008653.1| hypothetical protein REQ_39930 ... 197 2e-48
gi|111022482|ref|YP_705454.1| hypothetical protein RHA1_ro05516 ... 185 6e-45
gi|54027374|ref|YP_121616.1| hypothetical protein nfa54000 [Noca... 176 3e-42
gi|226364999|ref|YP_002782782.1| hypothetical protein ROP_55900 ... 174 1e-41
gi|226304882|ref|YP_002764840.1| hypothetical protein RER_13930 ... 173 3e-41
gi|326384124|ref|ZP_08205807.1| hypothetical protein SCNU_14374 ... 171 1e-40
gi|229493072|ref|ZP_04386867.1| conserved hypothetical protein [... 170 2e-40
gi|262203921|ref|YP_003275129.1| hypothetical protein Gbro_4070 ... 159 4e-37
gi|343928547|ref|ZP_08767994.1| hypothetical protein GOALK_118_0... 158 9e-37
gi|296138239|ref|YP_003645482.1| hypothetical protein Tpau_0502 ... 130 2e-28
gi|308395298|ref|ZP_07491979.2| hypothetical protein TMLG_01804 ... 123 4e-26
gi|333921728|ref|YP_004495309.1| hypothetical protein AS9A_4075 ... 102 9e-20
gi|305680489|ref|ZP_07403297.1| conserved hypothetical protein [... 98.2 1e-18
gi|225022534|ref|ZP_03711726.1| hypothetical protein CORMATOL_02... 97.4 2e-18
gi|296394018|ref|YP_003658902.1| hypothetical protein Srot_1609 ... 96.3 4e-18
gi|317507293|ref|ZP_07965036.1| hypothetical protein HMPREF9336_... 90.5 3e-16
gi|300859283|ref|YP_003784266.1| hypothetical protein cpfrc_0186... 89.7 5e-16
gi|337291702|ref|YP_004630723.1| hypothetical protein CULC22_020... 89.0 8e-16
gi|334697675|gb|AEG82472.1| putative secreted protein [Corynebac... 88.6 9e-16
gi|227505886|ref|ZP_03935935.1| conserved hypothetical protein [... 87.8 2e-15
gi|306836993|ref|ZP_07469942.1| conserved hypothetical protein [... 84.7 1e-14
gi|311740467|ref|ZP_07714295.1| conserved hypothetical protein [... 84.7 2e-14
gi|255325553|ref|ZP_05366653.1| conserved hypothetical protein [... 84.0 3e-14
gi|227501999|ref|ZP_03932048.1| conserved hypothetical protein [... 83.6 3e-14
gi|302531163|ref|ZP_07283505.1| predicted protein [Streptomyces ... 80.9 2e-13
>gi|15607524|ref|NP_214897.1| hypothetical protein Rv0383c [Mycobacterium tuberculosis H37Rv]
gi|15839767|ref|NP_334804.1| hypothetical protein MT0396 [Mycobacterium tuberculosis CDC1551]
gi|31791560|ref|NP_854053.1| hypothetical protein Mb0390c [Mycobacterium bovis AF2122/97]
64 more sequence titles
Length=284
Score = 575 bits (1482), Expect = 2e-162, Method: Compositional matrix adjust.
Identities = 284/284 (100%), Positives = 284/284 (100%), Gaps = 0/284 (0%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV
Sbjct 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD
Sbjct 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA
Sbjct 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELPPRRAQPDP 240
QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELPPRRAQPDP
Sbjct 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELPPRRAQPDP 240
Query 241 ATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQATNYQH 284
ATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQATNYQH
Sbjct 241 ATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQATNYQH 284
>gi|289748867|ref|ZP_06508245.1| conserved secreted protein [Mycobacterium tuberculosis T92]
gi|289689454|gb|EFD56883.1| conserved secreted protein [Mycobacterium tuberculosis T92]
Length=263
Score = 531 bits (1368), Expect = 4e-149, Method: Compositional matrix adjust.
Identities = 263/263 (100%), Positives = 263/263 (100%), Gaps = 0/263 (0%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV
Sbjct 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD
Sbjct 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA
Sbjct 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELPPRRAQPDP 240
QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELPPRRAQPDP
Sbjct 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELPPRRAQPDP 240
Query 241 ATTVLPDPARRAPEPIRRDEGRS 263
ATTVLPDPARRAPEPIRRDEGRS
Sbjct 241 ATTVLPDPARRAPEPIRRDEGRS 263
>gi|306970581|ref|ZP_07483242.1| conserved secreted protein [Mycobacterium tuberculosis SUMu010]
gi|308359888|gb|EFP48739.1| conserved secreted protein [Mycobacterium tuberculosis SUMu010]
Length=315
Score = 497 bits (1279), Expect = 9e-139, Method: Compositional matrix adjust.
Identities = 260/285 (92%), Positives = 265/285 (93%), Gaps = 2/285 (0%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV
Sbjct 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD
Sbjct 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA
Sbjct 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELPPRRAQPDP 240
QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELPPRRAQPDP
Sbjct 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELPPRRAQPDP 240
Query 241 ATTVLPDPARRAP--EPIRRDEGRSEGVRRPPPAGRNGQQATNYQ 283
ATTVLPDPARRAP + ++ G RR P A + TN +
Sbjct 241 ATTVLPDPARRAPSRSAAMKAAPKAFGARRRPDATASRPPTTNTE 285
>gi|289760494|ref|ZP_06519872.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|289708000|gb|EFD72016.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
Length=261
Score = 477 bits (1228), Expect = 9e-133, Method: Compositional matrix adjust.
Identities = 237/245 (97%), Positives = 238/245 (98%), Gaps = 0/245 (0%)
Query 40 SHGFDYERESTEILKRWTRGVMSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRK 99
+ G R TEILKRWTRGVMSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRK
Sbjct 17 ATGSTTNRNPTEILKRWTRGVMSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRK 76
Query 100 VGTNVVVDLRLKGLKEPRESDIWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCA 159
VGTNVVVDLRLKGLKEPRESDIWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCA
Sbjct 77 VGTNVVVDLRLKGLKEPRESDIWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCA 136
Query 160 EIMWNEQNWTLVSMPIASTRAQWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAP 219
EIMWNEQNWTLVSMPIASTRAQWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAP
Sbjct 137 EIMWNEQNWTLVSMPIASTRAQWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAP 196
Query 220 GRPVAPGGPAELPPRRAQPDPATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQA 279
GRPVAPGGPAELPPRRAQPDPATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQA
Sbjct 197 GRPVAPGGPAELPPRRAQPDPATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQA 256
Query 280 TNYQH 284
TNYQH
Sbjct 257 TNYQH 261
>gi|183980672|ref|YP_001848963.1| hypothetical protein MMAR_0647 [Mycobacterium marinum M]
gi|183173998|gb|ACC39108.1| conserved secreted protein [Mycobacterium marinum M]
Length=284
Score = 471 bits (1211), Expect = 7e-131, Method: Compositional matrix adjust.
Identities = 243/283 (86%), Positives = 254/283 (90%), Gaps = 0/283 (0%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
MVPLWFTLSALCFV AVVLLYVDIDRRRGRSRRRKSWARSHGFDYEREST+IL+RWTRGV
Sbjct 1 MVPLWFTLSALCFVSAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTDILQRWTRGV 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
MSTVG+V A NVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD
Sbjct 61 MSTVGEVPAKNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIAS+RA
Sbjct 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASSRA 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELPPRRAQPDP 240
QWDEGLRTVRQFNDLLRVLPPLPQE PQ+ + R + P ELPPRRAQ DP
Sbjct 181 QWDEGLRTVRQFNDLLRVLPPLPQESPQEAEESEPAQSGNRSLTPSRRPELPPRRAQVDP 240
Query 241 ATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQATNYQ 283
A +LPD +RR PEP+RR+EGRSEG RRPP GRNGQQAT YQ
Sbjct 241 AAGLLPDASRRTPEPMRREEGRSEGSRRPPLGGRNGQQATKYQ 283
>gi|118616023|ref|YP_904355.1| hypothetical protein MUL_0125 [Mycobacterium ulcerans Agy99]
gi|118568133|gb|ABL02884.1| conserved secreted protein [Mycobacterium ulcerans Agy99]
Length=284
Score = 470 bits (1210), Expect = 9e-131, Method: Compositional matrix adjust.
Identities = 242/283 (86%), Positives = 254/283 (90%), Gaps = 0/283 (0%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
M+PLWFTLSALCFV AVVLLYVDIDRRRGRSRRRKSWARSHGFDYEREST+IL+RWTRGV
Sbjct 1 MIPLWFTLSALCFVSAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTDILQRWTRGV 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
MSTVG+V A NVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD
Sbjct 61 MSTVGEVPAKNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIAS+RA
Sbjct 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASSRA 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELPPRRAQPDP 240
QWDEGLRTVRQFNDLLRVLPPLPQE PQ+ + R + P ELPPRRAQ DP
Sbjct 181 QWDEGLRTVRQFNDLLRVLPPLPQESPQEAEESEPAQSGNRSLTPSRRPELPPRRAQVDP 240
Query 241 ATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQATNYQ 283
A +LPD +RR PEP+RR+EGRSEG RRPP GRNGQQAT YQ
Sbjct 241 AAGLLPDASRRTPEPMRREEGRSEGSRRPPLGGRNGQQATKYQ 283
>gi|41409953|ref|NP_962789.1| hypothetical protein MAP3855 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118464891|ref|YP_883919.1| hypothetical protein MAV_4792 [Mycobacterium avium 104]
gi|41398786|gb|AAS06405.1| hypothetical protein MAP_3855 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118166178|gb|ABK67075.1| conserved hypothetical protein [Mycobacterium avium 104]
gi|336460405|gb|EGO39305.1| hypothetical protein MAPs_42030 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=290
Score = 469 bits (1208), Expect = 2e-130, Method: Compositional matrix adjust.
Identities = 246/289 (86%), Positives = 257/289 (89%), Gaps = 6/289 (2%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
MVPLWFTLSALCFVGA VLLYVDIDRRRGRSRRRKSWARSHGFDYEREST+ILKRW RGV
Sbjct 1 MVPLWFTLSALCFVGAGVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTDILKRWKRGV 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
MSTVGDVAA NVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD
Sbjct 61 MSTVGDVAAQNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLV+MPI STR
Sbjct 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVAMPITSTRT 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELPPRRAQPDP 240
QWDEGLRTVRQFNDLLRVLPPLP+E PQ+ PR ++P RP+AP G AELPPRRAQ D
Sbjct 181 QWDEGLRTVRQFNDLLRVLPPLPEETPQEAPAAPRNSSPSRPLAPAGRAELPPRRAQQDV 240
Query 241 ATTVLPD--PARRAPEPIRRD----EGRSEGVRRPPPAGRNGQQATNYQ 283
A + PD P RRA EP+RRD E R + +RRPPP GRNG QATNYQ
Sbjct 241 AGLLGPDVQPGRRAAEPVRRDQPRPEARPDTLRRPPPGGRNGHQATNYQ 289
>gi|306787380|ref|ZP_07425702.1| hypothetical protein TMDG_02578 [Mycobacterium tuberculosis SUMu004]
gi|308335936|gb|EFP24787.1| hypothetical protein TMDG_02578 [Mycobacterium tuberculosis SUMu004]
Length=230
Score = 469 bits (1207), Expect = 2e-130, Method: Compositional matrix adjust.
Identities = 230/230 (100%), Positives = 230/230 (100%), Gaps = 0/230 (0%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV
Sbjct 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD
Sbjct 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA
Sbjct 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAE 230
QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAE
Sbjct 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAE 230
>gi|240172147|ref|ZP_04750806.1| putative secreted protein [Mycobacterium kansasii ATCC 12478]
Length=285
Score = 468 bits (1205), Expect = 3e-130, Method: Compositional matrix adjust.
Identities = 249/285 (88%), Positives = 259/285 (91%), Gaps = 1/285 (0%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRR+SWARSHGFDYERESTEIL RW RGV
Sbjct 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRRSWARSHGFDYERESTEILHRWKRGV 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
MSTVGDV A NVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD
Sbjct 61 MSTVGDVPAKNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPI+STR
Sbjct 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPISSTRT 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGP-RGAAPGRPVAPGGPAELPPRRAQPD 239
QWDEGLRTVRQFNDLLRVLPPLPQ+ P R AAPGRP+A AELPPRRAQ D
Sbjct 181 QWDEGLRTVRQFNDLLRVLPPLPQDETSPESAEPARNAAPGRPLASARQAELPPRRAQVD 240
Query 240 PATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQATNYQH 284
PA ++PDPARR EP+RRDEGR EG RRPPPAGRNG+QA+N+QH
Sbjct 241 PAAGLIPDPARRVAEPVRRDEGRPEGFRRPPPAGRNGRQASNFQH 285
>gi|342859149|ref|ZP_08715803.1| hypothetical protein MCOL_09733 [Mycobacterium colombiense CECT
3035]
gi|342133390|gb|EGT86593.1| hypothetical protein MCOL_09733 [Mycobacterium colombiense CECT
3035]
Length=292
Score = 466 bits (1198), Expect = 2e-129, Method: Compositional matrix adjust.
Identities = 246/291 (85%), Positives = 260/291 (90%), Gaps = 8/291 (2%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
MVPLWFTLSALCFVGA VLLYVDIDRRRGRSRRRKSWARSHGFDYERES +ILKRW RGV
Sbjct 1 MVPLWFTLSALCFVGAGVLLYVDIDRRRGRSRRRKSWARSHGFDYERESADILKRWKRGV 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
MSTVG+VAA NVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD
Sbjct 61 MSTVGNVAAQNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPD AEIMWNEQNWTLV++PI STR
Sbjct 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDSAEIMWNEQNWTLVALPITSTRT 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGV--GPRGAAPGRPVAPGGPAELPPRRAQP 238
+WDEGLRTVRQFNDLLRVLPPLP+E PQ+TG G R A+P RP+AP G AELPPRRAQ
Sbjct 181 EWDEGLRTVRQFNDLLRVLPPLPEEAPQETGAPSGLRNASPSRPLAPAGRAELPPRRAQQ 240
Query 239 DPATTVLPD--PARRAPEPIRRDE----GRSEGVRRPPPAGRNGQQATNYQ 283
D A + PD P RRA EP+RRD+ GRSE VRRPPP+GRNG QA+NYQ
Sbjct 241 DVAGLLGPDLQPGRRAAEPVRRDQPRPDGRSETVRRPPPSGRNGHQASNYQ 291
>gi|289441762|ref|ZP_06431506.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289414681|gb|EFD11921.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length=259
Score = 460 bits (1184), Expect = 1e-127, Method: Compositional matrix adjust.
Identities = 226/228 (99%), Positives = 226/228 (99%), Gaps = 0/228 (0%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV
Sbjct 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD
Sbjct 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA
Sbjct 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGP 228
QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPV PG P
Sbjct 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVGPGRP 228
>gi|15828344|ref|NP_302607.1| hypothetical protein ML2489 [Mycobacterium leprae TN]
gi|221230821|ref|YP_002504237.1| putative secreted protein [Mycobacterium leprae Br4923]
gi|13094037|emb|CAC32006.1| possible secreted protein [Mycobacterium leprae]
gi|219933928|emb|CAR72588.1| possible secreted protein [Mycobacterium leprae Br4923]
Length=286
Score = 458 bits (1178), Expect = 5e-127, Method: Compositional matrix adjust.
Identities = 235/286 (83%), Positives = 248/286 (87%), Gaps = 2/286 (0%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEIL+RW RGV
Sbjct 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILQRWKRGV 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
MSTVGD++AHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTN+VVDLRLKGLKEPRESD
Sbjct 61 MSTVGDISAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNIVVDLRLKGLKEPRESD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAE+MWNEQNWTLVSMPI STR
Sbjct 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEVMWNEQNWTLVSMPIGSTRV 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELPPRRAQPDP 240
QWDEGLRTVRQFNDLLRVLPPLP + Q+ G R AAP RP+A G AELPP R
Sbjct 181 QWDEGLRTVRQFNDLLRVLPPLPADTSQEAGASARNAAPSRPLASVGRAELPPDRGVESD 240
Query 241 ATTVLPD--PARRAPEPIRRDEGRSEGVRRPPPAGRNGQQATNYQH 284
+L A R+ EPI RDEGR +G+RRPP RNG Q TNYQ+
Sbjct 241 VAGLLGSGVQAGRSAEPISRDEGRWDGIRRPPSVERNGHQTTNYQY 286
>gi|118470708|ref|YP_885142.1| hypothetical protein MSMEG_0736 [Mycobacterium smegmatis str.
MC2 155]
gi|118171995|gb|ABK72891.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=278
Score = 413 bits (1061), Expect = 2e-113, Method: Compositional matrix adjust.
Identities = 221/285 (78%), Positives = 241/285 (85%), Gaps = 10/285 (3%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
MVPLWFTLSALCFVGA VLLYVDIDRRRG RRRKSWA+SHGFDYE ES ++LKRW RGV
Sbjct 1 MVPLWFTLSALCFVGAAVLLYVDIDRRRGLGRRRKSWAKSHGFDYEYESEDLLKRWKRGV 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
MSTVGDV A NVVLGQIRGEAV+IFD+EEVATVIALHRKVGTNVVVDLRLKGLKEPRE+D
Sbjct 61 MSTVGDVTAKNVVLGQIRGEAVFIFDIEEVATVIALHRKVGTNVVVDLRLKGLKEPREND 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLV+MP+ S RA
Sbjct 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVAMPVTSNRA 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVA--PGGPAELPPRRAQP 238
QWDEGLRTVRQFNDLLRVLPP+PQ Q + RG +P RP+A P G ELPP RA
Sbjct 181 QWDEGLRTVRQFNDLLRVLPPVPQNG-SQAALPRRGGSPSRPLAPTPAGRRELPPGRADV 239
Query 239 DPATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQATNYQ 283
PA D +R AP P + GRS+ RRPPPA RNG++A+++Q
Sbjct 240 PPARG---DVSRFAPRP---EAGRSDAFRRPPPA-RNGREASHFQ 277
>gi|294995140|ref|ZP_06800831.1| secreted protein [Mycobacterium tuberculosis 210]
Length=315
Score = 410 bits (1053), Expect = 2e-112, Method: Compositional matrix adjust.
Identities = 210/211 (99%), Positives = 210/211 (99%), Gaps = 0/211 (0%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV
Sbjct 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD
Sbjct 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA
Sbjct 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTG 211
QWDEGLRTVRQFNDLLRVLPPLPQEMPQQ G
Sbjct 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQPG 211
>gi|254777229|ref|ZP_05218745.1| hypothetical protein MaviaA2_21529 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=221
Score = 399 bits (1026), Expect = 2e-109, Method: Compositional matrix adjust.
Identities = 203/221 (92%), Positives = 209/221 (95%), Gaps = 0/221 (0%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
MVPLWFTLSALCFVGA VLLYVDIDRRRGRSRRRKSWARSHGFDYEREST+ILKRW RGV
Sbjct 1 MVPLWFTLSALCFVGAGVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTDILKRWKRGV 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
MSTVGDVAA NVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD
Sbjct 61 MSTVGDVAAQNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLV+MPI STR
Sbjct 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVAMPITSTRT 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGR 221
QWDEGLRTVRQFNDLLRVLPPLP+E PQ+ PR ++P R
Sbjct 181 QWDEGLRTVRQFNDLLRVLPPLPEETPQEAPAAPRNSSPSR 221
>gi|108797459|ref|YP_637656.1| hypothetical protein Mmcs_0479 [Mycobacterium sp. MCS]
gi|119866544|ref|YP_936496.1| hypothetical protein Mkms_0490 [Mycobacterium sp. KMS]
gi|126433080|ref|YP_001068771.1| hypothetical protein Mjls_0468 [Mycobacterium sp. JLS]
gi|108767878|gb|ABG06600.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119692633|gb|ABL89706.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126232880|gb|ABN96280.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=288
Score = 394 bits (1011), Expect = 1e-107, Method: Compositional matrix adjust.
Identities = 212/289 (74%), Positives = 232/289 (81%), Gaps = 8/289 (2%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
MVPLWFTLSALCFVGA VLLYVDIDRRRG RRRKSWA+SHGFDYE ES +ILKRW RGV
Sbjct 1 MVPLWFTLSALCFVGAAVLLYVDIDRRRGLGRRRKSWAKSHGFDYEHESADILKRWKRGV 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
MSTVGDV A NVVLGQIRGEAV+IFDLE+VATVIALHRKVGTNVVVD+RLKG+KEPRE+D
Sbjct 61 MSTVGDVTAKNVVLGQIRGEAVFIFDLEDVATVIALHRKVGTNVVVDMRLKGIKEPREND 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQ+WTL+SMP+ STRA
Sbjct 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQHWTLISMPVTSTRA 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELPPRRAQPD- 239
QWDEGLRTVRQFNDLLRVLPP+PQ Q V R +P RP+ P P + +PD
Sbjct 181 QWDEGLRTVRQFNDLLRVLPPIPQTDSVQ-AVARRSGSPSRPINPAPHRPPEPPQGRPDV 239
Query 240 --PATTVLPDPARRAPEPIRRD---EGRSEGVRRPPPAGRNGQQATNYQ 283
P + P + PE R D R + RR PPA RNG Q+ N+Q
Sbjct 240 GRPGSAAPARPYAQRPEAGRPDGPPAARPDTARRTPPA-RNGHQSANFQ 287
>gi|307082867|ref|ZP_07491980.1| hypothetical protein TMLG_01805 [Mycobacterium tuberculosis SUMu012]
gi|308367410|gb|EFP56261.1| hypothetical protein TMLG_01805 [Mycobacterium tuberculosis SUMu012]
Length=188
Score = 388 bits (996), Expect = 6e-106, Method: Compositional matrix adjust.
Identities = 188/188 (100%), Positives = 188/188 (100%), Gaps = 0/188 (0%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV
Sbjct 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD
Sbjct 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA
Sbjct 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
Query 181 QWDEGLRT 188
QWDEGLRT
Sbjct 181 QWDEGLRT 188
>gi|120401675|ref|YP_951504.1| hypothetical protein Mvan_0660 [Mycobacterium vanbaalenii PYR-1]
gi|119954493|gb|ABM11498.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=259
Score = 386 bits (991), Expect = 2e-105, Method: Compositional matrix adjust.
Identities = 211/287 (74%), Positives = 227/287 (80%), Gaps = 33/287 (11%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
MVPLWFTLSALCFVGA VLLYVD+DRRRG RRRKSWA+SHGFDYE EST+ILKRW RGV
Sbjct 1 MVPLWFTLSALCFVGAAVLLYVDLDRRRGLGRRRKSWAKSHGFDYEHESTDILKRWKRGV 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
MSTVGDV A NVVLGQIRGEAV+IFDL++VATVIALHRKVGTNVVVD+RLKG+KEPRESD
Sbjct 61 MSTVGDVTARNVVLGQIRGEAVFIFDLDDVATVIALHRKVGTNVVVDMRLKGIKEPRESD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTL+SMP+ STRA
Sbjct 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLISMPVTSTRA 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELPPRRAQPDP 240
QWDEGLRTVRQFNDLLRVLPPLP Q V R +P RP+ P
Sbjct 181 QWDEGLRTVRQFNDLLRVLPPLPSAATGQP-VARRSGSPSRPLTPA-------------- 225
Query 241 ATTVLPDPARRAPEPIRRDEGRSEGVRR-PPPAG---RNGQQATNYQ 283
P R + GR + VRR PPPAG RNG+Q+ NYQ
Sbjct 226 --------------PARPEAGRPDPVRRTPPPAGPPQRNGRQSPNYQ 258
>gi|254820197|ref|ZP_05225198.1| hypothetical protein MintA_09731 [Mycobacterium intracellulare
ATCC 13950]
Length=209
Score = 382 bits (981), Expect = 3e-104, Method: Compositional matrix adjust.
Identities = 194/209 (93%), Positives = 200/209 (96%), Gaps = 0/209 (0%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
MVPLWFTLSALCFVGA VLLYVD+DRRRGRSRRRKSWARSHGFDYERES +ILKRW RGV
Sbjct 1 MVPLWFTLSALCFVGAGVLLYVDVDRRRGRSRRRKSWARSHGFDYERESADILKRWKRGV 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
MSTVGDV A NVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD
Sbjct 61 MSTVGDVTAQNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPD AEIMWNEQNWTLV+MPI STR
Sbjct 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDSAEIMWNEQNWTLVAMPITSTRT 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQ 209
+WDEGLRTVRQFNDLLRVLPPLP+E PQ+
Sbjct 181 EWDEGLRTVRQFNDLLRVLPPLPEETPQE 209
>gi|296167816|ref|ZP_06850002.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897046|gb|EFG76666.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=221
Score = 367 bits (943), Expect = 8e-100, Method: Compositional matrix adjust.
Identities = 196/221 (89%), Positives = 205/221 (93%), Gaps = 2/221 (0%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
MVPLWFTLSALCFVGA VLLYVD+DRRRGRSRRR+SWARSHGFDYERES +ILKRW RGV
Sbjct 1 MVPLWFTLSALCFVGAGVLLYVDLDRRRGRSRRRRSWARSHGFDYERESADILKRWKRGV 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
+STVGD+AA NVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD
Sbjct 61 ISTVGDIAAENVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPD AEIMWNEQNWTLV+MPI STR
Sbjct 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDSAEIMWNEQNWTLVAMPITSTRT 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTG--VGPRGAAP 219
QWDEGLRTVRQFNDLLRVLPPL +E Q+ G G R A+P
Sbjct 181 QWDEGLRTVRQFNDLLRVLPPLLEETQQEAGAPAGLRSASP 221
>gi|333988989|ref|YP_004521603.1| hypothetical protein JDM601_0349 [Mycobacterium sp. JDM601]
gi|333484957|gb|AEF34349.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=300
Score = 365 bits (937), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 209/300 (70%), Positives = 228/300 (76%), Gaps = 18/300 (6%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
MVPLWFTLSALCFVGA VLLYVD+D+RRGRSRRR+SWARS GFD+E ESTEIL+RW RGV
Sbjct 1 MVPLWFTLSALCFVGAGVLLYVDLDQRRGRSRRRRSWARSQGFDFELESTEILQRWKRGV 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
+ST GD NVVLGQIRGEAVYIFDL+EVATVIALHRKV TNVVVD+RLKGLKEPRE+D
Sbjct 61 ISTAGDAPVRNVVLGQIRGEAVYIFDLDEVATVIALHRKVSTNVVVDVRLKGLKEPREND 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNE NWTLVSMPI STRA
Sbjct 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEANWTLVSMPITSTRA 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGP------RGAAPGRPVAPGGPAEL--- 231
QWDEGLR+VRQFNDLLRVLPP P+ P + G R P RP+ GG A+
Sbjct 181 QWDEGLRSVRQFNDLLRVLPPTPRREPFEAATGAAKPASRRNGQPSRPLGSGGAADSAED 240
Query 232 -------PPRRAQPDPATTVLPDPARRAPEPIRRDEGRSEGVRRPPP-AGRNGQQATNYQ 283
P RA PA R+ RDE +S + P P AGRNG+Q +YQ
Sbjct 241 SAADQASSPSRASAPPAGNTAAAAEPRSRRRAARDE-QSGMLHAPSPGAGRNGRQTAHYQ 299
>gi|315442196|ref|YP_004075075.1| hypothetical protein Mspyr1_05310 [Mycobacterium sp. Spyr1]
gi|315260499|gb|ADT97240.1| hypothetical protein Mspyr1_05310 [Mycobacterium sp. Spyr1]
Length=265
Score = 365 bits (936), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 187/226 (83%), Positives = 201/226 (89%), Gaps = 1/226 (0%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
MVPLWFTLSALCFVGA VLLYVD+DRRRG RRRKSWA+SHGFDYE EST+I+KRW RGV
Sbjct 1 MVPLWFTLSALCFVGAAVLLYVDLDRRRGLGRRRKSWAKSHGFDYEHESTDIIKRWKRGV 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
MSTVGDV A NVVLGQIRGEAV+IFDL++VATVIALHRKVGTNV VD+RLK +KEPRESD
Sbjct 61 MSTVGDVTARNVVLGQIRGEAVFIFDLDDVATVIALHRKVGTNVTVDMRLKDVKEPRESD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNE NWTL+SMP+ STRA
Sbjct 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEGNWTLISMPVTSTRA 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPG 226
QWDEGLRTVRQFNDLLRVLPP+P Q V R +P RP+ P
Sbjct 181 QWDEGLRTVRQFNDLLRVLPPVPTAATGQP-VARRTGSPSRPLTPA 225
>gi|169631342|ref|YP_001704991.1| hypothetical protein MAB_4264c [Mycobacterium abscessus ATCC
19977]
gi|169243309|emb|CAM64337.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=243
Score = 318 bits (815), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 172/240 (72%), Positives = 189/240 (79%), Gaps = 6/240 (2%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
M LWFTLSALCFV A VLLYVDI RRR R RRKSWARSHGFDY + EI+KRW RGV
Sbjct 1 MALLWFTLSALCFVCAGVLLYVDIGRRRSRGHRRKSWARSHGFDYMPQDKEIVKRWNRGV 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
MS+ G AA NVVLGQIRGEAVY+FDLE+VAT+IALHRKVGTNV+VDLRLK ++EPRESD
Sbjct 61 MSSAGSAAAANVVLGQIRGEAVYVFDLEDVATIIALHRKVGTNVMVDLRLKVMQEPRESD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAP+ AE++WNEQ+WTL ++PI S R
Sbjct 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPETAEVLWNEQHWTLAALPINSNRE 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELPPRRAQPDP 240
QWDEGL+ VRQFNDLLRVLPP + P R P RPV G P QP P
Sbjct 181 QWDEGLKAVRQFNDLLRVLPPSGESAPSPIQAAAR---PSRPV---GSNAAPVADRQPAP 234
>gi|254549326|ref|ZP_05139773.1| secreted protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=112
Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 112/112 (100%), Positives = 112/112 (100%), Gaps = 0/112 (0%)
Query 173 MPIASTRAQWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELP 232
MPIASTRAQWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELP
Sbjct 1 MPIASTRAQWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELP 60
Query 233 PRRAQPDPATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQATNYQH 284
PRRAQPDPATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQATNYQH
Sbjct 61 PRRAQPDPATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQATNYQH 112
>gi|325673846|ref|ZP_08153536.1| hypothetical protein HMPREF0724_11318 [Rhodococcus equi ATCC
33707]
gi|325555111|gb|EGD24783.1| hypothetical protein HMPREF0724_11318 [Rhodococcus equi ATCC
33707]
Length=226
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/225 (44%), Positives = 141/225 (63%), Gaps = 4/225 (1%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
M +WF L+ + GAVVLLYVD RR R R+ WA++ G+ Y + +W R
Sbjct 1 MTAMWFGLAVIALAGAVVLLYVDRSRRDQTGRVRQIWAKAQGYTYNTADEHLPSQWHRAA 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
++ + A +VV G RGE +FDLE+ AT++A+HR+VG++V +DLRLK PR+SD
Sbjct 61 LAKQEYLGAVDVVRGVRRGEQFVLFDLEDTATIVAVHREVGSDVDIDLRLKSTPPPRDSD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
+ LLGAIGPR+V++T+L+ ARR CD+RMV F + P +++W+E WTL S+PI ST
Sbjct 121 LNLLGAIGPRVVFATDLEIARRVCDQRMVAFTESVPPQLQMLWSEGEWTLGSLPIGSTGR 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAP 225
WD + V + + +LRVLPP + Q P PGRP+AP
Sbjct 181 DWDAAIEVVARLSGMLRVLPPAVEPPAMQ----PAAHDPGRPIAP 221
>gi|312141317|ref|YP_004008653.1| hypothetical protein REQ_39930 [Rhodococcus equi 103S]
gi|311890656|emb|CBH49975.1| putative secreted protein [Rhodococcus equi 103S]
Length=223
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/222 (45%), Positives = 140/222 (64%), Gaps = 4/222 (1%)
Query 4 LWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGVMST 63
+WF L+ + GAVVLLYVD RR R R+ WA++ G+ Y + +W R ++
Sbjct 1 MWFGLAVIALAGAVVLLYVDRSRRDQTGRVRQIWAKAQGYTYNTADEHLPSQWHRAALAK 60
Query 64 VGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESDIWL 123
+ A +VV G RGE +FDLE+ AT++A+HR+VG++V +DLRLK PR+SD+ L
Sbjct 61 QEYLGAVDVVRGVRRGEQFVLFDLEDTATIVAVHREVGSDVDIDLRLKSTPPPRDSDLNL 120
Query 124 LGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRAQWD 183
LGAIGPR+V++T+L+ ARR CD+RMV F + P +++W+E WTL S+PI ST WD
Sbjct 121 LGAIGPRVVFATDLEIARRVCDQRMVAFTESVPPQLQMLWSEGEWTLGSLPIGSTGRDWD 180
Query 184 EGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAP 225
+ V + + +LRVLPP + Q P PGRP+AP
Sbjct 181 AAIEVVARLSGMLRVLPPAVEPPAMQ----PAAHDPGRPIAP 218
>gi|111022482|ref|YP_705454.1| hypothetical protein RHA1_ro05516 [Rhodococcus jostii RHA1]
gi|110822012|gb|ABG97296.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=270
Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 96/241 (40%), Positives = 146/241 (61%), Gaps = 15/241 (6%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
M +WF L+ + GA LLY D RR R R+ WA++ G+ Y+ ++ ++ R
Sbjct 1 MTGMWFVLALIALAGACALLYFDRSRRDQTGRVRQIWAKAQGYTYDNVEEKLPGQFHRAA 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
++ ++A +VV G+ RGE+ +FDLEE AT++A+ R+VG++V +DLRLK P++SD
Sbjct 61 LAKQEYLSAIDVVKGERRGESFILFDLEETATIVAVRRRVGSDVDIDLRLKSTPPPKDSD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
+ LLGAIGPR+V++T+L+ ARR CD+RMV F + P ++W+E WTL S+PI S+
Sbjct 121 LELLGAIGPRVVFATDLEIARRVCDQRMVAFTESVPPHVNMLWSEGEWTLGSLPIGSSGR 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGA-----APGRP-VAPGGPAELPPR 234
+WD + V + + +L VLPP+ + PRG P RP + G PAE P
Sbjct 181 EWDSAIEAVARLSGILHVLPPITE---------PRGLDRGHHDPSRPRLREGAPAEARPA 231
Query 235 R 235
R
Sbjct 232 R 232
>gi|54027374|ref|YP_121616.1| hypothetical protein nfa54000 [Nocardia farcinica IFM 10152]
gi|54018882|dbj|BAD60252.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=353
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 80/209 (39%), Positives = 133/209 (64%), Gaps = 0/209 (0%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
M +WF L+A+ VGA+VLLY D +R+ R+ WA++ G+ Y + W RG
Sbjct 1 MTAMWFGLAAIALVGAIVLLYFDRVQRQRSGHARQVWAKAQGYTYVSVEPALTSTWRRGA 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
++ +G ++A +VV G +GE +FDLE+ AT++A+ R++G+++ +D+RLK P+++D
Sbjct 61 LAKLGYLSAVDVVTGIRKGEKFVLFDLEDAATLVAVRRQIGSDIDIDMRLKTASPPKDAD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
+ LLGAIG R+V++TN + AR A D+RMV F T PD +++W+E NWTL + + ++
Sbjct 121 LELLGAIGDRVVFATNPEIARHAVDQRMVAFIETLPDTVQMLWSEGNWTLGMLNVGTSAR 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQ 209
W+ + V + + LL VLPP+ + P
Sbjct 181 DWETAIDVVLRLSGLLHVLPPVSEPRPND 209
>gi|226364999|ref|YP_002782782.1| hypothetical protein ROP_55900 [Rhodococcus opacus B4]
gi|226243489|dbj|BAH53837.1| hypothetical protein [Rhodococcus opacus B4]
Length=281
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/280 (39%), Positives = 162/280 (58%), Gaps = 17/280 (6%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
M +WF L+ + GA LLY D RR R R+ WA++ G+ Y+ + ++ R
Sbjct 1 MTGMWFLLALIALAGACALLYFDRSRRDQTGRVRQIWAKAQGYTYDNVEERLPAQFHRAA 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
++ ++A +VV G+ RGE+ +FDLEE AT++A+ R+VG++V +DLRLK P++SD
Sbjct 61 LAKQEYLSAIDVVKGERRGESFILFDLEETATIVAVRRRVGSDVDIDLRLKSTPPPKDSD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
+ LLGAIGPR+V++T+L+ ARR CD+RMV F + P ++W+E WTL S+PI S+
Sbjct 121 LDLLGAIGPRVVFATDLEIARRVCDQRMVAFTESVPPHVNMLWSEGEWTLGSLPIGSSGR 180
Query 181 QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRP-VAPGGPAELPPRRAQPD 239
+WD + V + + +L VLPP+ + +G+ P RP + G PAE A+P
Sbjct 181 EWDSAIEAVARLSGILHVLPPVTEP----SGLDRGHHDPSRPRLRDGAPAE-----ARPA 231
Query 240 PATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQA 279
P P AR AP +GR RP P GR QA
Sbjct 232 PEGRPSPQ-ARPAP------QGRPASQGRPAPQGRPAPQA 264
>gi|226304882|ref|YP_002764840.1| hypothetical protein RER_13930 [Rhodococcus erythropolis PR4]
gi|226183997|dbj|BAH32101.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=299
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/286 (38%), Positives = 157/286 (55%), Gaps = 17/286 (5%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
M +WF L+A+ GA LLYVD RR R R+ WA++ G+ Y ++ W R V
Sbjct 2 MTGMWFGLAAIALAGAGALLYVDRTRRDQSGRVRQIWAKAQGYTYTATDDQLAGEWHRAV 61
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
M+ + A +VV G+ RGE +FDLEE AT++A+ R++G++V +DLRLK P++ D
Sbjct 62 MAKQDYLTATDVVRGRRRGEQFVLFDLEETATIVAVRREIGSDVDIDLRLKSTAPPKDGD 121
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
+ LLGAIG R+V++T+L+ ARR CD+RMV F + P ++W+E WTL S+P+ S
Sbjct 122 LNLLGAIGSRVVFATDLEIARRVCDQRMVAFTESVPPSISMLWSEGQWTLGSLPVTSNGR 181
Query 181 QWDEGLRTVRQFNDLLRVLPPL--PQEMP-QQTGVGPR-GAAPGRPV----------APG 226
WD + +V + + +L VLPP+ P E+ PR GA RP
Sbjct 182 DWDAAIESVARLSGILHVLPPVTDPNELEVDHDPSRPRPGAEKSRPTPDPVEQPRSRQEQ 241
Query 227 GPAELPPRRAQPDPATTVLPDPARRAPEP---IRRDEGRSEGVRRP 269
P E PPR P + P P AP P +R+ E + +RP
Sbjct 242 PPREAPPREFAPRESAPREPAPRESAPRPDQSLRKPEAADKPAQRP 287
>gi|326384124|ref|ZP_08205807.1| hypothetical protein SCNU_14374 [Gordonia neofelifaecis NRRL
B-59395]
gi|326197284|gb|EGD54475.1| hypothetical protein SCNU_14374 [Gordonia neofelifaecis NRRL
B-59395]
Length=302
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/210 (41%), Positives = 123/210 (59%), Gaps = 2/210 (0%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
M ++F ++ L VGA LL++D +R + +R W +H F + +++ + R
Sbjct 1 MAIVYFVIAVLALVGAGALLWLDRNRSQQVHHQRAVWGETHSFKFRETDSKLRTVFHRAA 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
M V +V G G +FDLEE ATV+A+ R + V VDLR + + P E D
Sbjct 61 MDAPEHVQVRDVAYGVYEGAEAVVFDLEETATVVAVRRPAASAVTVDLRYEDVLAPAEDD 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
+ LLGA+G R+++++NLDAARR CDRRMVT A P EI+WNE NW L +MP+ +
Sbjct 121 VDLLGAMGSRVMFASNLDAARRICDRRMVTLATDTPAYVEILWNEGNWALGAMPVTTEDE 180
Query 181 QWDEGLRTVRQFNDLLRVLPP--LPQEMPQ 208
+ D L VR+F DLLRVLPP +PQ+ P
Sbjct 181 RLDVALDAVRRFADLLRVLPPAVVPQDAPD 210
>gi|229493072|ref|ZP_04386867.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229320102|gb|EEN85928.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=295
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/283 (38%), Positives = 156/283 (56%), Gaps = 17/283 (6%)
Query 4 LWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGVMST 63
+WF L+A+ GA LLYVD RR R R+ WA++ G+ Y ++ W R VM+
Sbjct 1 MWFGLAAIALAGAGALLYVDRTRRDQSGRVRQIWAKAQGYTYTATDDQLAGEWHRAVMAK 60
Query 64 VGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESDIWL 123
+ A +VV G+ RGE +FDLEE AT++A+ R++G++V +DLRLK P++ D+ L
Sbjct 61 QDYLTATDVVRGRRRGEQFVLFDLEETATIVAVRREIGSDVDIDLRLKSTAPPKDGDLNL 120
Query 124 LGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRAQWD 183
LGAIG R+V++T+L+ ARR CD+RMV F + P ++W+E WTL S+P+ S WD
Sbjct 121 LGAIGSRVVFATDLEIARRVCDQRMVAFTESVPPSISMLWSEGQWTLGSLPVTSNGRDWD 180
Query 184 EGLRTVRQFNDLLRVLPPL--PQEMP-QQTGVGPR-GAAPGRPV----------APGGPA 229
+ +V + + +L VLPP+ P E+ PR GA RP P
Sbjct 181 AAIESVARLSGILHVLPPVTDPNELEVDHDPSRPRPGAEKSRPTPDPVEQPRSRQEQPPR 240
Query 230 ELPPRRAQPDPATTVLPDPARRAPEP---IRRDEGRSEGVRRP 269
+ PPR P + P P AP P +R+ E + +RP
Sbjct 241 DAPPREFAPRESAPREPAPRESAPRPDQSLRKPEAADKPAQRP 283
>gi|262203921|ref|YP_003275129.1| hypothetical protein Gbro_4070 [Gordonia bronchialis DSM 43247]
gi|262087268|gb|ACY23236.1| hypothetical protein Gbro_4070 [Gordonia bronchialis DSM 43247]
Length=335
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/207 (43%), Positives = 125/207 (61%), Gaps = 2/207 (0%)
Query 4 LWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGVMST 63
++F ++AL GAVVLL++D R +R W H F + T++ K + R M+
Sbjct 5 VYFVIAALALAGAVVLLWLDRQRSNVARHQRAVWGDEHDFKFRESDTKLRKVFHRATMNV 64
Query 64 VGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESDIWL 123
VA +V G G +FDL + ATV+A+ R + VV+DLR + + P E D+ L
Sbjct 65 PDHVAVRDVAFGHYGGVEAVVFDLVDTATVVAVRRAGPSPVVIDLRHEDVLAPIEEDVEL 124
Query 124 LGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRAQWD 183
LGA+GPR+++S NLD ARR CDRRMV A+ AP E++WNE NW L SMP+ + + +
Sbjct 125 LGAMGPRVMFSNNLDVARRVCDRRMVALANKAPAFVEVLWNEGNWALGSMPLTNDVGELN 184
Query 184 EGLRTVRQFNDLLRVLPPL--PQEMPQ 208
GL VR+F DLLRVLPP+ PQ+ P
Sbjct 185 TGLDVVRRFADLLRVLPPMRDPQDTPD 211
>gi|343928547|ref|ZP_08767994.1| hypothetical protein GOALK_118_00380 [Gordonia alkanivorans NBRC
16433]
gi|343761558|dbj|GAA14920.1| hypothetical protein GOALK_118_00380 [Gordonia alkanivorans NBRC
16433]
Length=306
Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/210 (43%), Positives = 125/210 (60%), Gaps = 2/210 (0%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
M ++F ++A+ GA VLL++D R +R W H F + T++ K + R
Sbjct 1 MTTVYFLIAAVALAGAGVLLWLDRQRSSVARHQRAIWGDEHEFKFRETDTKLRKVFRRAT 60
Query 61 MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD 120
M+ V +V G+ G +FDL E ATVIA+ R + VVVDLR + + P E D
Sbjct 61 MNVPDHVEVRDVAYGRYGGVETVVFDLAETATVIAVRRSSPSPVVVDLRHEDVLAPAEED 120
Query 121 IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA 180
+ LLGA+GPR+++S NLD ARR CDRRMV A+ AP E++WNE NW L S+P+ + A
Sbjct 121 VELLGAMGPRVMFSNNLDVARRVCDRRMVALANKAPAFVEVLWNEGNWALGSLPLTNDPA 180
Query 181 QWDEGLRTVRQFNDLLRVLPPL--PQEMPQ 208
+ GL VR+F DLLRVLPP+ P++ P
Sbjct 181 TLNTGLEVVRRFADLLRVLPPVREPEDSPD 210
>gi|296138239|ref|YP_003645482.1| hypothetical protein Tpau_0502 [Tsukamurella paurometabola DSM
20162]
gi|296026373|gb|ADG77143.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length=230
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/190 (42%), Positives = 102/190 (54%), Gaps = 3/190 (1%)
Query 34 RKSWARSHGFDYERESTEILKRWTRGVMSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATV 93
R +WA S F Y + + RG M GD +V G G Y+FDL E AT+
Sbjct 35 RAAWATSREFVYRPSDESLRDEFHRGGMVMPGDPPVVDVAHGTYFGANAYVFDLAESATI 94
Query 94 IALHRKVGTNVVVDLRLKGLKEPRESDIWLLGAIGPRMVYSTNLDAARRACDRRMVTFAH 153
A+HR + ++DLR + P E+ + LGA+G R++Y+ N D ARR DRRM+TFA
Sbjct 95 AAVHRGSASGALMDLRPENAHPPVEAGMEPLGALGTRILYTNNADVARRVADRRMITFAE 154
Query 154 TAPDCAEIMWNEQNWTLVSMPIASTRAQWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVG 213
P E +WNE WTL MP+ DE L VR+F DLLRVLPP +G G
Sbjct 155 QVPAHIESLWNEGPWTLGQMPLTDDPDDLDEALEAVRRFGDLLRVLPPEGHARVVTSG-G 213
Query 214 PRGAAPGRPV 223
PR PG+PV
Sbjct 214 PRD--PGQPV 221
>gi|308395298|ref|ZP_07491979.2| hypothetical protein TMLG_01804 [Mycobacterium tuberculosis SUMu012]
gi|308367459|gb|EFP56310.1| hypothetical protein TMLG_01804 [Mycobacterium tuberculosis SUMu012]
Length=62
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/62 (99%), Positives = 62/62 (100%), Gaps = 0/62 (0%)
Query 223 VAPGGPAELPPRRAQPDPATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQATNY 282
+APGGPAELPPRRAQPDPATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQATNY
Sbjct 1 MAPGGPAELPPRRAQPDPATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQATNY 60
Query 283 QH 284
QH
Sbjct 61 QH 62
>gi|333921728|ref|YP_004495309.1| hypothetical protein AS9A_4075 [Amycolicicoccus subflavus DQS3-9A1]
gi|333483949|gb|AEF42509.1| hypothetical protein AS9A_4075 [Amycolicicoccus subflavus DQS3-9A1]
Length=223
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/214 (31%), Positives = 103/214 (49%), Gaps = 13/214 (6%)
Query 1 MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV 60
M +WF L + +GA+++L +D RR + + R W G ++ R+ I +W G
Sbjct 1 MAVMWFLLGGMALIGAIIVLRIDSRRRAWQRKVRSIWGARRGLEFTRKVPRIAVQWRFGT 60
Query 61 MSTVGDVAAHNVVLGQIR-----GEAVYIFDLEEVATVIALHRKVGTNV---VVDLRLKG 112
+ NVV G R G +FDL++ AT++A + + VV +G
Sbjct 61 VGRHTLTDGRNVVQGVPRLSRDEGCQELLFDLDDAATILAFEVPIEAGIAFEVVRTDPEG 120
Query 113 LKEPRESDIWLLG-----AIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQN 167
P + G IG +YS +++AARRA D R+V+F P C +++W E +
Sbjct 121 RPAPAIAARPAPGTSPVAVIGEWTIYSDDVEAARRAADLRLVSFLDAVPACVDVIWAEAD 180
Query 168 WTLVSMPIASTRAQWDEGLRTVRQFNDLLRVLPP 201
W L SM + A+WD + +F L+RVLPP
Sbjct 181 WVLASMDPGMSWAEWDAAEEWLTRFAGLMRVLPP 214
>gi|305680489|ref|ZP_07403297.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
gi|305660020|gb|EFM49519.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
Length=551
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/182 (33%), Positives = 95/182 (53%), Gaps = 6/182 (3%)
Query 28 RGRSRRRKSWARSHGFDYERESTEILKRWTRGVMSTVGDVAAHNVVLGQIRGEAVYIFDL 87
R +R R++WA+ H F+Y++E + W+ G S+ ++ A +VV G G +++ DL
Sbjct 270 RSATRARRNWAQEHEFEYQKEDPYLSDEWSHGFASS--NLTAKDVVSGFAAGYELWLVDL 327
Query 88 EEVATVIALHRKVGTNVVVDLR--LKGLKEPRESDIWLLGAIGPRMVYSTNLDAARRACD 145
+V TV+A+ RK ++VV+D+R L+ E+ + + G V+S N AA+R D
Sbjct 328 GQV-TVMAMRRKATSDVVIDIRRILQSDTYKFENLVSVTTFQG-FHVFSNNPGAAQRFID 385
Query 146 RRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRAQWDEGLRTVRQFNDLLRVLPPLPQE 205
R+ T T P MW E +W L + P S WD ++ + D VLPP P
Sbjct 386 DRVGTAFATMPAKVTAMWLESSWVLAATPKGSVEEDWDAMIQPLALLADAAYVLPPAPGA 445
Query 206 MP 207
MP
Sbjct 446 MP 447
>gi|225022534|ref|ZP_03711726.1| hypothetical protein CORMATOL_02574 [Corynebacterium matruchotii
ATCC 33806]
gi|224944657|gb|EEG25866.1| hypothetical protein CORMATOL_02574 [Corynebacterium matruchotii
ATCC 33806]
Length=394
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/182 (33%), Positives = 95/182 (53%), Gaps = 6/182 (3%)
Query 28 RGRSRRRKSWARSHGFDYERESTEILKRWTRGVMSTVGDVAAHNVVLGQIRGEAVYIFDL 87
R +R R++WA+ H F+Y++E + W+ G S+ ++ A +VV G G +++ DL
Sbjct 113 RSATRARRNWAQEHEFEYQKEDPYLSDEWSHGFASS--NLTAKDVVSGFAAGYELWLVDL 170
Query 88 EEVATVIALHRKVGTNVVVDLR--LKGLKEPRESDIWLLGAIGPRMVYSTNLDAARRACD 145
+V TV+A+ RK ++VV+D+R L+ E+ + + G V+S N AA+R D
Sbjct 171 GQV-TVMAMRRKATSDVVIDIRRILQSDTYKFENLVSVTTFQG-FHVFSNNPGAAQRFID 228
Query 146 RRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRAQWDEGLRTVRQFNDLLRVLPPLPQE 205
R+ T T P MW E +W L + P S WD ++ + D VLPP P
Sbjct 229 DRVGTAFATMPAKVTAMWLESSWVLAATPKGSVEEDWDAMIQPLALLADAAYVLPPAPGA 288
Query 206 MP 207
MP
Sbjct 289 MP 290
>gi|296394018|ref|YP_003658902.1| hypothetical protein Srot_1609 [Segniliparus rotundus DSM 44985]
gi|296181165|gb|ADG98071.1| hypothetical protein Srot_1609 [Segniliparus rotundus DSM 44985]
Length=381
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/175 (30%), Positives = 88/175 (51%), Gaps = 1/175 (0%)
Query 28 RGRSRRRKSWARSHGFDYERESTEILKRWTRGVMSTVGDVAAHNVVLGQIRGEAVYIFDL 87
+ ++R WA GF+++ ++ RW RGV + AA +V + + FD+
Sbjct 179 KAERQKRHQWANERGFEHQASDAALVHRWRRGVFAARQAKAARAIVRAETDIGILEFFDV 238
Query 88 EEVATVIALHRKVGTNVVVDLRLKGLKEPRESDIWLLGAIGPRMVYSTNLDAARRAC-DR 146
+++ + ALH + ++V+V+LR P SD+ +G +G Y++++ A +R D
Sbjct 239 DDLVAIAALHTEHPSSVLVELRAGWAGPPVLSDVARVGELGGYEFYASDVGAGQRFLWDP 298
Query 147 RMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRAQWDEGLRTVRQFNDLLRVLPP 201
R+ F P ++WNE W L +P+ A D VR+ DLLRVLPP
Sbjct 299 RLEGFIARLPQFVRVLWNEGPWVLAELPLDIPDADLDSAAVVVRELADLLRVLPP 353
>gi|317507293|ref|ZP_07965036.1| hypothetical protein HMPREF9336_01408 [Segniliparus rugosus ATCC
BAA-974]
gi|316254422|gb|EFV13749.1| hypothetical protein HMPREF9336_01408 [Segniliparus rugosus ATCC
BAA-974]
Length=240
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/196 (29%), Positives = 95/196 (49%), Gaps = 5/196 (2%)
Query 28 RGRSRRRKSWARSHGFDYERESTEILKRWTRGVMSTVGDVAAHNVVLGQIRGEAVYIFDL 87
+ ++R+ WA F YE + ++ RW RGV + AA +V + + FD+
Sbjct 38 KAERQKRQQWASERNFQYESSDSALVHRWRRGVFAARQAKAARAIVRAETDIGILEFFDV 97
Query 88 EEVATVIALHRKVGTNVVVDLRLKGLKEPRESDIWLLGAIGPRMVYSTNLDAARRAC-DR 146
+++ + ALH + ++V ++LR P +D+ +G +G V+++++ A +R D
Sbjct 98 DDLVAIAALHTEHPSSVRIELRAGWAGPPVLADVTRVGELGGYEVHASDVGAGQRFLWDP 157
Query 147 RMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRAQWDEGLRTVRQFNDLLRVLPPLPQEM 206
R+ F P ++WNE W L +P+ + D VR+ DLLRVLPP
Sbjct 158 RLEGFIARLPQFVRVLWNEGPWVLAELPLDIPDSDLDSAAVVVRELADLLRVLPPELDPE 217
Query 207 PQQTGVGPRGAAPGRP 222
P V +G PG P
Sbjct 218 P----VDRQGFDPGAP 229
>gi|300859283|ref|YP_003784266.1| hypothetical protein cpfrc_01866 [Corynebacterium pseudotuberculosis
FRC41]
gi|300686737|gb|ADK29659.1| putative secreted protein [Corynebacterium pseudotuberculosis
FRC41]
gi|302206971|gb|ADL11313.1| Hypothetical protein CpC231_1857 [Corynebacterium pseudotuberculosis
C231]
gi|302331531|gb|ADL21725.1| Hypothetical protein Cp1002_1864 [Corynebacterium pseudotuberculosis
1002]
gi|308277222|gb|ADO27121.1| Putative secreted protein [Corynebacterium pseudotuberculosis
I19]
gi|341825664|gb|AEK93185.1| Hypothetical protein CpPAT10_1868 [Corynebacterium pseudotuberculosis
PAT10]
Length=332
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/176 (32%), Positives = 86/176 (49%), Gaps = 9/176 (5%)
Query 28 RGRSRRRKSWARSHGFDYERESTEILKRWTRGVMSTVGDVAAHNVVLGQIRGEAVYIFDL 87
+G + +K+WA +HGFDY +E + W+R + V A NVV G G +Y+ +L
Sbjct 50 KGGRKEKKTWAEAHGFDYTKEDAFLSDEWSR--EAAVDGAIARNVVSGIAGGYEMYLVEL 107
Query 88 EEVATVIALHRKVGTNVVVDLRLKGLKEPRES--DIWLLGAIGPRMVYSTNLDAARRACD 145
V +V+AL R V ++VVV G +E E D+ + I +YS + A R D
Sbjct 108 GGV-SVMALRRAVSSDVVV----VGRREAHEDTEDLRQVSCIEGFTLYSNDQGATERMLD 162
Query 146 RRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRAQWDEGLRTVRQFNDLLRVLPP 201
R+ P ++W E +W L + ST W+ ++ + F D RVLPP
Sbjct 163 ERVDKAFADMPSAVSVVWEESDWVLAQLERGSTHEDWEALIQPLTLFADATRVLPP 218
>gi|337291702|ref|YP_004630723.1| hypothetical protein CULC22_02099 [Corynebacterium ulcerans BR-AD22]
gi|334700008|gb|AEG84804.1| putative secreted protein [Corynebacterium ulcerans BR-AD22]
Length=332
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/174 (31%), Positives = 86/174 (50%), Gaps = 5/174 (2%)
Query 28 RGRSRRRKSWARSHGFDYERESTEILKRWTRGVMSTVGDVAAHNVVLGQIRGEAVYIFDL 87
RG + +K+WA S GFDY +E + W+RGV + A +VV G G +++ +L
Sbjct 50 RGSRKEKKAWAESKGFDYTKEDAFLADEWSRGVAAE--GAVARDVVSGIAGGYEMHLVEL 107
Query 88 EEVATVIALHRKVGTNVVVDLRLKGLKEPRESDIWLLGAIGPRMVYSTNLDAARRACDRR 147
V +V+AL R ++VVV R + ++ D+ + I ++Y + A R D R
Sbjct 108 GGV-SVMALRRAATSDVVVVARREAQEDAE--DLMQVSRIEGFILYGNDQGAIERMLDER 164
Query 148 MVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRAQWDEGLRTVRQFNDLLRVLPP 201
+ + P ++W E +W L + ST WD ++ + F D RVLPP
Sbjct 165 VDKAFASMPSAVSVVWEESDWVLAQLERGSTHEDWDALIQPLALFADAARVLPP 218
>gi|334697675|gb|AEG82472.1| putative secreted protein [Corynebacterium ulcerans 809]
Length=332
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/174 (31%), Positives = 86/174 (50%), Gaps = 5/174 (2%)
Query 28 RGRSRRRKSWARSHGFDYERESTEILKRWTRGVMSTVGDVAAHNVVLGQIRGEAVYIFDL 87
RG + +K+WA S GFDY +E + W+RGV + A +VV G G +++ +L
Sbjct 50 RGSRKEKKAWAESKGFDYTKEDAFLADEWSRGVAAE--GAVARDVVSGIAGGYEMHLVEL 107
Query 88 EEVATVIALHRKVGTNVVVDLRLKGLKEPRESDIWLLGAIGPRMVYSTNLDAARRACDRR 147
V +V+AL R ++VVV R + ++ D+ + I ++Y + A R D R
Sbjct 108 GGV-SVMALRRAATSDVVVVARREAQEDAE--DLMQVSRIEGFILYGNDQGAIERMLDER 164
Query 148 MVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRAQWDEGLRTVRQFNDLLRVLPP 201
+ + P ++W E +W L + ST WD ++ + F D RVLPP
Sbjct 165 VDKAFASMPSAVSVVWEESDWVLAQLERGSTHEDWDALIQPLALFADAARVLPP 218
>gi|227505886|ref|ZP_03935935.1| conserved hypothetical protein [Corynebacterium striatum ATCC
6940]
gi|227197514|gb|EEI77562.1| conserved hypothetical protein [Corynebacterium striatum ATCC
6940]
Length=282
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/171 (29%), Positives = 86/171 (51%), Gaps = 4/171 (2%)
Query 32 RRRKSWARSHGFDYERESTEILKRWTRGVMSTVGDVAAHNVVLGQIRGEAVYIFDLEEVA 91
R R++W HGF+Y ++ + W RG + +G A ++V G + G + + DL +
Sbjct 3 RGRRAWGEEHGFEYTKQDDYLADEWMRGA-AALG-AAPKDIVAGFVHGHEMLMMDLGGI- 59
Query 92 TVIALHRKVGTNVVVDLRLKGLKEPRES-DIWLLGAIGPRMVYSTNLDAARRACDRRMVT 150
V+A+ +++VVD R G++E S D++++ I V++T++ +R D R+
Sbjct 60 NVMAMRTGATSDIVVDFRRVGIEEDSASEDLFMVDEIEGFEVFATDVGVGKRLIDERLEV 119
Query 151 FAHTAPDCAEIMWNEQNWTLVSMPIASTRAQWDEGLRTVRQFNDLLRVLPP 201
H P +W E W L + A+WD L + + D+ RVLPP
Sbjct 120 ALHLLPAEVTAVWMESEWVLAQTTKHARAAEWDAMLAPMAKLADVARVLPP 170
>gi|306836993|ref|ZP_07469942.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
gi|304567132|gb|EFM42748.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
Length=673
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/171 (31%), Positives = 81/171 (48%), Gaps = 4/171 (2%)
Query 32 RRRKSWARSHGFDYERESTEILKRWTRGVMSTVGDVAAHNVVLGQIRGEAVYIFDLEEVA 91
R RK+WA + GF+Y + ++ WTRGV S+ A ++V G + G + + D++ V
Sbjct 314 RERKNWAETRGFEYMKSDQYLVDEWTRGVASSG--AAPKDIVAGNVYGHEMLLMDIDGV- 370
Query 92 TVIALHRKVGTNVVVDLRLKGLKEPRES-DIWLLGAIGPRMVYSTNLDAARRACDRRMVT 150
V+A+ ++VV+D + +EP S D+ L I VYS++ R D R+
Sbjct 371 NVMAMRTGAASDVVIDFQRFDSQEPEMSEDLLLAMNIEGFEVYSSDRGVTERMVDERVRI 430
Query 151 FAHTAPDCAEIMWNEQNWTLVSMPIASTRAQWDEGLRTVRQFNDLLRVLPP 201
P+ +W E W L S A W+ L + D RVLPP
Sbjct 431 ALQRMPEVVSALWLETEWVLAQTTKHSRTADWEAMLPPLALLADAARVLPP 481
>gi|311740467|ref|ZP_07714295.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311304513|gb|EFQ80588.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
Length=478
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/171 (30%), Positives = 81/171 (48%), Gaps = 4/171 (2%)
Query 32 RRRKSWARSHGFDYERESTEILKRWTRGVMSTVGDVAAHNVVLGQIRGEAVYIFDLEEVA 91
R R++WA + GF++ + ++ WTRGV ST A ++V G + G + + D++ V
Sbjct 167 RERRNWAEAKGFEFMKADPYLVDEWTRGVAST--GAAPKDIVAGNVYGHEMLLMDIDGV- 223
Query 92 TVIALHRKVGTNVVVDLRLKGLKEPRES-DIWLLGAIGPRMVYSTNLDAARRACDRRMVT 150
V+A+ +++VVD R + + S D+ L I VYS++ R D R+
Sbjct 224 NVMAMRTGAASDMVVDFRRFDRDDAKASEDLLLAMTIEGFDVYSSDSAVTERMVDERVHV 283
Query 151 FAHTAPDCAEIMWNEQNWTLVSMPIASTRAQWDEGLRTVRQFNDLLRVLPP 201
P+ +W E W L + A+WD L + D RVLPP
Sbjct 284 ALQQMPEAVTALWMETEWVLAQTTKQARSAEWDAMLPPLALLADAARVLPP 334
>gi|255325553|ref|ZP_05366653.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
gi|255297341|gb|EET76658.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
Length=314
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/171 (30%), Positives = 81/171 (48%), Gaps = 4/171 (2%)
Query 32 RRRKSWARSHGFDYERESTEILKRWTRGVMSTVGDVAAHNVVLGQIRGEAVYIFDLEEVA 91
R R++WA + GF++ + ++ WTRGV ST A ++V G + G + + D++ V
Sbjct 3 RERRNWAEAKGFEFMKADPYLVDEWTRGVAST--GAAPKDIVAGNVYGHEMLLMDIDGV- 59
Query 92 TVIALHRKVGTNVVVDLRLKGLKEPRES-DIWLLGAIGPRMVYSTNLDAARRACDRRMVT 150
V+A+ +++VVD R + + S D+ L I VYS++ R D R+
Sbjct 60 NVMAMRTGAASDMVVDFRRFDRDDAKASEDLLLAMTIEGFDVYSSDSAVTERMVDERVHV 119
Query 151 FAHTAPDCAEIMWNEQNWTLVSMPIASTRAQWDEGLRTVRQFNDLLRVLPP 201
P+ +W E W L + A+WD L + D RVLPP
Sbjct 120 ALQQMPETVTALWMETEWVLAQTTKQARSAEWDAMLPPLALLADAARVLPP 170
>gi|227501999|ref|ZP_03932048.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49725]
gi|227077283|gb|EEI15246.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49725]
Length=688
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/171 (31%), Positives = 81/171 (48%), Gaps = 4/171 (2%)
Query 32 RRRKSWARSHGFDYERESTEILKRWTRGVMSTVGDVAAHNVVLGQIRGEAVYIFDLEEVA 91
R RK+WA + GF+Y + ++ WTRGV S+ A ++V G + G + + D++ V
Sbjct 328 RERKNWAETRGFEYMKSDQYLVDEWTRGVASSG--AAPKDIVAGNVYGHEMLLMDIDGV- 384
Query 92 TVIALHRKVGTNVVVDLRLKGLKEPRES-DIWLLGAIGPRMVYSTNLDAARRACDRRMVT 150
V+A+ ++VV+D + +EP S D+ L I VYS++ R D R+
Sbjct 385 NVMAMRTGAASDVVIDFQRFDSQEPEMSEDLLLAMNIEGFEVYSSDRGVTERMVDERVRI 444
Query 151 FAHTAPDCAEIMWNEQNWTLVSMPIASTRAQWDEGLRTVRQFNDLLRVLPP 201
P+ +W E W L S A W+ L + D RVLPP
Sbjct 445 ALQRMPEVVSALWLETEWVLAQTTKHSRTADWEAMLPPLALLADAARVLPP 495
>gi|302531163|ref|ZP_07283505.1| predicted protein [Streptomyces sp. AA4]
gi|302440058|gb|EFL11874.1| predicted protein [Streptomyces sp. AA4]
Length=303
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/201 (27%), Positives = 96/201 (48%), Gaps = 8/201 (3%)
Query 4 LWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGVMST 63
+WF ++A+ V + LL+ D + R+R R+ WA+ G+ + E + ++W+ G +
Sbjct 7 IWFVIAAVALVAGLGLLFADRAKEGSRNRERQRWAQLRGWQFVEEDERLPRQWSGGAIGY 66
Query 64 VGDVAAHNVVLGQIRGEA----VYIFDLEEV----ATVIALHRKVGTNVVVDLRLKGLKE 115
G AA NVV G V+IFD+E A V+A+ V V++ L +
Sbjct 67 FGADAAVNVVAGSTFTSDGRRPVFIFDIESQGQVPAVVVAVRCNKTHRVPVEMWLSSVPF 126
Query 116 PRESDIWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPI 175
RE+ +LG IG R ++ + + AR+ + +V A + W E W L S+
Sbjct 127 QRENMPEMLGPIGQRYAFADDSEGARQVITQDLVDAADQLGGDVGVAWLENEWVLASVVP 186
Query 176 ASTRAQWDEGLRTVRQFNDLL 196
+ ++ + LR + + D++
Sbjct 187 GAGPSRLERLLRDLGEIADIV 207
Lambda K H
0.321 0.137 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 455254791584
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40