BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0384c Length=848 Score E Sequences producing significant alignments: (Bits) Value gi|308370390|ref|ZP_07421333.2| endopeptidase subunit ATP bindin... 1685 0.0 gi|15607525|ref|NP_214898.1| endopeptidase ATP binding protein [... 1684 0.0 gi|340625415|ref|YP_004743867.1| putative endopeptidase ATP bind... 1683 0.0 gi|306796119|ref|ZP_07434421.1| endopeptidase subunit ATP bindin... 1680 0.0 gi|240172144|ref|ZP_04750803.1| putative endopeptidase ATP bindi... 1618 0.0 gi|183980670|ref|YP_001848961.1| endopeptidase ATP binding prote... 1592 0.0 gi|118616025|ref|YP_904357.1| endopeptidase ATP binding protein ... 1590 0.0 gi|296167815|ref|ZP_06850001.1| chaperone protein ClpB [Mycobact... 1582 0.0 gi|254820195|ref|ZP_05225196.1| chaperone ClpB [Mycobacterium in... 1582 0.0 gi|118470039|ref|YP_885138.1| chaperone ClpB [Mycobacterium smeg... 1566 0.0 gi|118466771|ref|YP_883920.1| chaperone ClpB [Mycobacterium aviu... 1558 0.0 gi|41409951|ref|NP_962787.1| ClpB [Mycobacterium avium subsp. pa... 1556 0.0 gi|108797458|ref|YP_637655.1| ATPase AAA-2 [Mycobacterium sp. MC... 1552 0.0 gi|342859150|ref|ZP_08715804.1| chaperone ClpB [Mycobacterium co... 1541 0.0 gi|333988986|ref|YP_004521600.1| endopeptidase ATP binding prote... 1532 0.0 gi|120401674|ref|YP_951503.1| ATPase [Mycobacterium vanbaalenii ... 1531 0.0 gi|145220850|ref|YP_001131528.1| ATPase [Mycobacterium gilvum PY... 1528 0.0 gi|15828345|ref|NP_302608.1| heat shock protein [Mycobacterium l... 1511 0.0 gi|169631343|ref|YP_001704992.1| chaperone ClpB [Mycobacterium a... 1458 0.0 gi|226364997|ref|YP_002782780.1| chaperone ClpB [Rhodococcus opa... 1410 0.0 gi|111022480|ref|YP_705452.1| ATP-binding subunit of heat shock ... 1409 0.0 gi|312141323|ref|YP_004008659.1| clp peptidase ATP-binding subun... 1401 0.0 gi|343927304|ref|ZP_08766780.1| chaperone ClpB [Gordonia alkaniv... 1396 0.0 gi|262203952|ref|YP_003275160.1| ATP-dependent chaperone ClpB [G... 1391 0.0 gi|333921729|ref|YP_004495310.1| chaperone protein ClpB [Amycoli... 1384 0.0 gi|296138231|ref|YP_003645474.1| ATP-dependent chaperone ClpB [T... 1382 0.0 gi|226304880|ref|YP_002764838.1| chaperone ClpB [Rhodococcus ery... 1376 0.0 gi|326384837|ref|ZP_08206513.1| ATP-dependent chaperone ClpB [Go... 1375 0.0 gi|229492957|ref|ZP_04386752.1| ATP-dependent chaperone protein ... 1364 0.0 gi|54027376|ref|YP_121618.1| putative Clp protease ATP-binding s... 1349 0.0 gi|289568297|ref|ZP_06448524.1| endopeptidase subunit ATP bindin... 1323 0.0 gi|317507295|ref|ZP_07965037.1| ATP-dependent chaperone ClpB [Se... 1308 0.0 gi|325002495|ref|ZP_08123607.1| ATP-dependent chaperone ClpB [Ps... 1307 0.0 gi|296394017|ref|YP_003658901.1| ATP-dependent chaperone ClpB [S... 1302 0.0 gi|331700249|ref|YP_004336488.1| ATP-dependent chaperone ClpB [P... 1301 0.0 gi|145296772|ref|YP_001139593.1| hypothetical protein cgR_2676 [... 1281 0.0 gi|19553971|ref|NP_601973.1| ATPase with chaperone activity, ATP... 1280 0.0 gi|256380924|ref|YP_003104584.1| ATP-dependent chaperone ClpB [A... 1276 0.0 gi|134103621|ref|YP_001109282.1| putative Clp protease ATP-bindi... 1270 0.0 gi|300859293|ref|YP_003784276.1| ATP-dependent Clp protease ATP-... 1267 0.0 gi|302206981|gb|ADL11323.1| ATP-dependent chaperone protein ClpB... 1265 0.0 gi|302531164|ref|ZP_07283506.1| ATP-dependent chaperone ClpB [St... 1265 0.0 gi|257057792|ref|YP_003135624.1| ATP-dependent chaperone ClpB [S... 1264 0.0 gi|260578525|ref|ZP_05846437.1| chaperone protein ClpB [Coryneba... 1260 0.0 gi|336324863|ref|YP_004604829.1| ATP-dependent Clp protease [Cor... 1259 0.0 gi|68535266|ref|YP_249971.1| ATP-dependent Clp protease, ATP-bin... 1259 0.0 gi|213965100|ref|ZP_03393298.1| ATP-dependent chaperone ClpB [Co... 1258 0.0 gi|334697684|gb|AEG82481.1| ATP-dependent Clp protease ATP-bindi... 1257 0.0 gi|25029169|ref|NP_739223.1| putative endopeptidase Clp ATP-bind... 1256 0.0 gi|227834132|ref|YP_002835839.1| ATP-dependent Clp protease, ATP... 1256 0.0 >gi|308370390|ref|ZP_07421333.2| endopeptidase subunit ATP binding protein B clpB [Mycobacterium tuberculosis SUMu003] gi|308375144|ref|ZP_07442858.2| endopeptidase subunit ATP binding protein B clpB [Mycobacterium tuberculosis SUMu007] gi|4098131|gb|AAD00218.1| clpB [Mycobacterium bovis] gi|308332178|gb|EFP21029.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium tuberculosis SUMu003] gi|308347335|gb|EFP36186.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium tuberculosis SUMu007] gi|323721237|gb|EGB30297.1| endopeptidase subunit ATP binding protein B ClpB [Mycobacterium tuberculosis CDC1551A] gi|339297082|gb|AEJ49192.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium tuberculosis CCDC5180] Length=877 Score = 1685 bits (4363), Expect = 0.0, Method: Compositional matrix adjust. Identities = 848/848 (100%), Positives = 848/848 (100%), Gaps = 0/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV Sbjct 30 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 89 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS Sbjct 90 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 149 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV Sbjct 150 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 209 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL Sbjct 210 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 269 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI Sbjct 270 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 329 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV Sbjct 330 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 389 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV Sbjct 390 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 449 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL Sbjct 450 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 509 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD Sbjct 510 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 569 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT Sbjct 570 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 629 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA Sbjct 630 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 689 Query 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS Sbjct 690 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 749 Query 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR Sbjct 750 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 809 Query 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP Sbjct 810 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 869 Query 841 DADSLILG 848 DADSLILG Sbjct 870 DADSLILG 877 >gi|15607525|ref|NP_214898.1| endopeptidase ATP binding protein [Mycobacterium tuberculosis H37Rv] gi|15839768|ref|NP_334805.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Mycobacterium tuberculosis CDC1551] gi|31791561|ref|NP_854054.1| endopeptidase ATP-binding protein ClpB [Mycobacterium bovis AF2122/97] 64 more sequence titles Length=848 Score = 1684 bits (4362), Expect = 0.0, Method: Compositional matrix adjust. Identities = 847/848 (99%), Positives = 848/848 (100%), Gaps = 0/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV Sbjct 1 MDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS Sbjct 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV Sbjct 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL Sbjct 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI Sbjct 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV Sbjct 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV Sbjct 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL Sbjct 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD Sbjct 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT Sbjct 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA Sbjct 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 Query 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS Sbjct 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 Query 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR Sbjct 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 Query 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP Sbjct 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 Query 841 DADSLILG 848 DADSLILG Sbjct 841 DADSLILG 848 >gi|340625415|ref|YP_004743867.1| putative endopeptidase ATP binding protein subunit B [Mycobacterium canettii CIPT 140010059] gi|340003605|emb|CCC42726.1| putative endopeptidase ATP binding protein (chain B) CLPB (CLPB protein) (heat shock protein F84.1) [Mycobacterium canettii CIPT 140010059] Length=848 Score = 1683 bits (4359), Expect = 0.0, Method: Compositional matrix adjust. Identities = 846/848 (99%), Positives = 848/848 (100%), Gaps = 0/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV Sbjct 1 MDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS Sbjct 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV Sbjct 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL Sbjct 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI Sbjct 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV Sbjct 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV Sbjct 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMALSKEED+ASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL Sbjct 421 RRLEIEEMALSKEEDDASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD Sbjct 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT Sbjct 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA Sbjct 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 Query 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS Sbjct 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 Query 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR Sbjct 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 Query 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP Sbjct 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 Query 841 DADSLILG 848 DADSLILG Sbjct 841 DADSLILG 848 >gi|306796119|ref|ZP_07434421.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium tuberculosis SUMu006] gi|308343443|gb|EFP32294.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium tuberculosis SUMu006] Length=848 Score = 1680 bits (4352), Expect = 0.0, Method: Compositional matrix adjust. Identities = 846/848 (99%), Positives = 847/848 (99%), Gaps = 0/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV Sbjct 1 MDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS Sbjct 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV Sbjct 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL Sbjct 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI Sbjct 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV Sbjct 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV Sbjct 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL Sbjct 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD Sbjct 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT Sbjct 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA Sbjct 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 Query 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS Sbjct 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 Query 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFE LNPEELVRIVDIQLAQLGKRLAQRR Sbjct 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEVLNPEELVRIVDIQLAQLGKRLAQRR 780 Query 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP Sbjct 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 Query 841 DADSLILG 848 DADSLILG Sbjct 841 DADSLILG 848 >gi|240172144|ref|ZP_04750803.1| putative endopeptidase ATP binding protein chain b [Mycobacterium kansasii ATCC 12478] Length=848 Score = 1618 bits (4189), Expect = 0.0, Method: Compositional matrix adjust. Identities = 808/848 (96%), Positives = 830/848 (98%), Gaps = 0/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTKTQAALT+ALQAAS AGNPEIRPAHLLMALLTQ DGIAAPLLEAVGVEPA + Sbjct 1 MDSFNPTTKTQAALTSALQAASAAGNPEIRPAHLLMALLTQADGIAAPLLEAVGVEPAGI 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 RAE QRLLDRLPQA+GASTQPQLSRESLAAIT AQQLATELDDEYVSTEHVMVGLATGDS Sbjct 61 RAEAQRLLDRLPQASGASTQPQLSRESLAAITAAQQLATELDDEYVSTEHVMVGLATGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DVAKLL GHGASPQALREAFVKVRGSARVTSPEPEATYQAL+KYSTDLTARAREGKLDPV Sbjct 121 DVAKLLNGHGASPQALREAFVKVRGSARVTSPEPEATYQALEKYSTDLTARAREGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTI+AL Sbjct 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIIAL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI Sbjct 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTLDEYRK+IEKDAALERRFQQV+VGEPSVEDTIGILRGLKDRYEV Sbjct 301 KPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDTIGILRGLKDRYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDE+ASRLRMEIDSRPVEIDEVERLV Sbjct 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDESASRLRMEIDSRPVEIDEVERLV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMAL+KEEDEAS ERL KLR+ELADQKEKLAELT RWQNEKNAIEIVR+LKEQL Sbjct 421 RRLEIEEMALAKEEDEASKERLEKLRAELADQKEKLAELTARWQNEKNAIEIVRELKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALP+AQAREQVMLKEEVGPDDIAD Sbjct 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPEAQAREQVMLKEEVGPDDIAD 540 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRV+GQK AV AVSDAVRRSRAGVSDPNRPT Sbjct 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVVGQKKAVQAVSDAVRRSRAGVSDPNRPT 600 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA Sbjct 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 Query 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 GGQLTE+VRRRPYTVVLFDE+EKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS Sbjct 661 GGQLTESVRRRPYTVVLFDEVEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 Query 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 NLGSGGS EQV+AAVRATFKPEFINRLDDVLIFEGLNPEELV+IVDIQLAQL KRLAQRR Sbjct 721 NLGSGGSEEQVMAAVRATFKPEFINRLDDVLIFEGLNPEELVQIVDIQLAQLQKRLAQRR 780 Query 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 LQL+VSL AK+WLA RGFDPVYGARPLRRLVQQAIGDQLAKMLLAG+VHDGD VPVNVS Sbjct 781 LQLEVSLQAKQWLAHRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGEVHDGDVVPVNVSA 840 Query 841 DADSLILG 848 D D+LILG Sbjct 841 DGDALILG 848 >gi|183980670|ref|YP_001848961.1| endopeptidase ATP binding protein (chain B) ClpB [Mycobacterium marinum M] gi|183173996|gb|ACC39106.1| endopeptidase ATP binding protein (chain B) ClpB [Mycobacterium marinum M] Length=848 Score = 1592 bits (4121), Expect = 0.0, Method: Compositional matrix adjust. Identities = 788/848 (93%), Positives = 827/848 (98%), Gaps = 0/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTKTQAALT+ALQAAS AGNPEIRPAHLLMALLTQ DGIAAPLLEAVGV+PAT+ Sbjct 1 MDSFNPTTKTQAALTSALQAASAAGNPEIRPAHLLMALLTQADGIAAPLLEAVGVDPATI 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 R E QRL+DRLPQA+GASTQPQLSRESLAAITTAQQLATE+DDEYVSTEHV+VGLATGDS Sbjct 61 RTEAQRLVDRLPQASGASTQPQLSRESLAAITTAQQLATEMDDEYVSTEHVLVGLATGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 +VAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQAL+KYSTDLTARAREGKLDPV Sbjct 121 EVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALEKYSTDLTARAREGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL Sbjct 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI Sbjct 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPS EDTIGILRGLKDRYEV Sbjct 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSAEDTIGILRGLKDRYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV Sbjct 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMALSKEED+AS +RL KLR+ELAD+KE+LAELTTRWQNEKN+IEIVR+LKEQL Sbjct 421 RRLEIEEMALSKEEDDASKDRLEKLRAELADKKEELAELTTRWQNEKNSIEIVRELKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 +ALRGESERAERDGDLAKAAELRYGRIPE+EKKLDAA+P AQAREQVMLKEEVGPDDIA+ Sbjct 481 DALRGESERAERDGDLAKAAELRYGRIPEMEKKLDAAVPHAQAREQVMLKEEVGPDDIAE 540 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VVSAWTGIPAGR+LEGETAKLLRMEDELG RVIGQK AV AVSDAVRRSRAGV+DPNRPT Sbjct 541 VVSAWTGIPAGRMLEGETAKLLRMEDELGHRVIGQKKAVQAVSDAVRRSRAGVADPNRPT 600 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 G+FMFLGPTGVGKTELAKALA+FLFDDERAMVRIDMSEYGEKH+VARL+GAPPGY+GY+ Sbjct 601 GSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYIGYDQ 660 Query 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 GGQLTEAVRRRPYTV+LFDEIEKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTILILTS Sbjct 661 GGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTS 720 Query 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 NLGSGG+ +QV+AAVRA FKPEFINRLDDVLIF+ LNP+ELV+IVDIQL QL KRLAQRR Sbjct 721 NLGSGGTPDQVMAAVRAAFKPEFINRLDDVLIFDALNPDELVQIVDIQLQQLDKRLAQRR 780 Query 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 LQL+VSLPAK WLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVS Sbjct 781 LQLEVSLPAKEWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSA 840 Query 841 DADSLILG 848 D +SL+LG Sbjct 841 DGESLVLG 848 >gi|118616025|ref|YP_904357.1| endopeptidase ATP binding protein (chain B) ClpB [Mycobacterium ulcerans Agy99] gi|118568135|gb|ABL02886.1| endopeptidase ATP binding protein (chain B) ClpB [Mycobacterium ulcerans Agy99] Length=848 Score = 1590 bits (4116), Expect = 0.0, Method: Compositional matrix adjust. Identities = 787/848 (93%), Positives = 826/848 (98%), Gaps = 0/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTKTQAALT+ALQAAS AGNPEIRPAHLLMALLTQ DGIAAPLLEAVGV+PAT+ Sbjct 1 MDSFNPTTKTQAALTSALQAASAAGNPEIRPAHLLMALLTQADGIAAPLLEAVGVDPATI 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 R E QRL+DRLPQA+GASTQPQLSRESLAAITTAQQLATE+DDEYVSTEHV+VGLATGDS Sbjct 61 RTEAQRLVDRLPQASGASTQPQLSRESLAAITTAQQLATEMDDEYVSTEHVLVGLATGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 +VAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQAL+KYSTDLTARAREGKLDPV Sbjct 121 EVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALEKYSTDLTARAREGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL Sbjct 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI Sbjct 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPS EDTIGILRGLKDRYEV Sbjct 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSAEDTIGILRGLKDRYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV Sbjct 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMALSKEED+AS +RL KLR+ELAD+KE+LAELTTRWQNEKN+IEIVR+LKEQL Sbjct 421 RRLEIEEMALSKEEDDASKDRLEKLRAELADKKEELAELTTRWQNEKNSIEIVRELKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 +ALRGESERAERDGDLAKAAELRYGRIPE+EKKLDAA+P AQAREQVMLKEEVGPDDIA+ Sbjct 481 DALRGESERAERDGDLAKAAELRYGRIPEMEKKLDAAVPHAQAREQVMLKEEVGPDDIAE 540 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VVSAWTGIPAGR+LEGETAKLLRMEDELG RVIGQK AV AVSDAVRRSRAGV+DPNRPT Sbjct 541 VVSAWTGIPAGRMLEGETAKLLRMEDELGHRVIGQKKAVQAVSDAVRRSRAGVADPNRPT 600 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 G+FMFLGPTGVGKTELAKALA+FLFDDERAMVRIDMSEYGEKH+VARL+GAPPGY+GY+ Sbjct 601 GSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYIGYDH 660 Query 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 GGQLTEAVRRRPYTV+LFDEIEKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTILILTS Sbjct 661 GGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTS 720 Query 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 NLGSGG+ +QV+AAVRA FKPEFINRLDDVLIF+ LNP+ELV+IVDIQL QL KRLAQRR Sbjct 721 NLGSGGTPDQVMAAVRAAFKPEFINRLDDVLIFDALNPDELVQIVDIQLQQLDKRLAQRR 780 Query 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 LQL+VSLPAK WLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVS Sbjct 781 LQLEVSLPAKEWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSA 840 Query 841 DADSLILG 848 D +SL+ G Sbjct 841 DGESLVFG 848 >gi|296167815|ref|ZP_06850001.1| chaperone protein ClpB [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897045|gb|EFG76665.1| chaperone protein ClpB [Mycobacterium parascrofulaceum ATCC BAA-614] Length=848 Score = 1582 bits (4097), Expect = 0.0, Method: Compositional matrix adjust. Identities = 785/848 (93%), Positives = 823/848 (98%), Gaps = 0/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTKTQAALT+ALQAAS AGNPEIRPAHLLMALLTQ DGIA PLLEAVGV PAT+ Sbjct 1 MDSFNPTTKTQAALTSALQAASAAGNPEIRPAHLLMALLTQADGIAGPLLEAVGVAPATI 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 RAE +RL+ +LPQA+GAS+QPQLSRESLAAITTAQQLATE+DDEYVSTEHVMVGLATGDS Sbjct 61 RAEAERLVAQLPQASGASSQPQLSRESLAAITTAQQLATEMDDEYVSTEHVMVGLATGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQAL+KYSTDLTARAREGKLDPV Sbjct 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALEKYSTDLTARAREGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKT+++L Sbjct 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTVISL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAG+KYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI Sbjct 241 DLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTLDEYRK+IEKDAALERRFQQV VGEPSVEDT+GILRGLKDRYEV Sbjct 301 KPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKDRYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRL+MEIDSRPVEIDEVERLV Sbjct 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLKMEIDSRPVEIDEVERLV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMAL+KEEDEAS ERL KLRSELADQKEKLAELTTRWQNEK+AI++VR+LKEQL Sbjct 421 RRLEIEEMALAKEEDEASKERLEKLRSELADQKEKLAELTTRWQNEKSAIDVVRELKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALP A+ARE VMLKEEVGPDDIA+ Sbjct 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPHAEARENVMLKEEVGPDDIAE 540 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VVSAWTGIPAGR+LEGETAKLLRMEDELGKRVIGQK AVTAVSDAVRRSRAGV+DPNRPT Sbjct 541 VVSAWTGIPAGRMLEGETAKLLRMEDELGKRVIGQKRAVTAVSDAVRRSRAGVADPNRPT 600 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 G+FMFLGPTGVGKTELAKALA+FLFDDERAMVRIDMSEYGEKH+VARL+GAPPGY+GY+ Sbjct 601 GSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYIGYDQ 660 Query 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 GGQLTEAVRRRPYTV+LFDEIEKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTILILTS Sbjct 661 GGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTS 720 Query 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 NLGSGGS EQV+AAVR+ FKPEFINRLDDV+IF GL P ELV IVDIQLAQL KRLAQRR Sbjct 721 NLGSGGSEEQVMAAVRSAFKPEFINRLDDVIIFHGLEPGELVSIVDIQLAQLQKRLAQRR 780 Query 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 L L+VSLPAK+WLAQRGFDPVYGARPLRRLVQQAIGDQLAK LLAG VHDGDTVPVNVSP Sbjct 781 LTLEVSLPAKQWLAQRGFDPVYGARPLRRLVQQAIGDQLAKQLLAGDVHDGDTVPVNVSP 840 Query 841 DADSLILG 848 D DSLILG Sbjct 841 DGDSLILG 848 >gi|254820195|ref|ZP_05225196.1| chaperone ClpB [Mycobacterium intracellulare ATCC 13950] Length=848 Score = 1582 bits (4097), Expect = 0.0, Method: Compositional matrix adjust. Identities = 783/848 (93%), Positives = 825/848 (98%), Gaps = 0/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTKTQAALT+ALQAAS AGNPEIRPAHLLMALLTQ DGIAAPLLEAVGV PAT+ Sbjct 1 MDSFNPTTKTQAALTSALQAASAAGNPEIRPAHLLMALLTQADGIAAPLLEAVGVAPATI 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 RAE +RLL+RLPQA+GAS+QPQLSRESLAAITTAQQLATE+DDEYVSTEH+MVGLATGDS Sbjct 61 RAEAERLLERLPQASGASSQPQLSRESLAAITTAQQLATEMDDEYVSTEHLMVGLATGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DVAKLLTGHGASPQALREAFVKVRGSARVTS +PEATYQAL+KYSTDLTARAREGKLDPV Sbjct 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSADPEATYQALEKYSTDLTARAREGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKT+++L Sbjct 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTVISL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAG+KYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI Sbjct 241 DLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTLDEYRK+IEKDAALERRFQQV VGEPSVEDT+GILRGLKDRYEV Sbjct 301 KPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKDRYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRL+MEIDSRPVEIDEVERLV Sbjct 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLKMEIDSRPVEIDEVERLV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMAL+KEEDEAS ERL KLRSELADQKEKLAELTTRWQNEKNAI++VR+LKEQL Sbjct 421 RRLEIEEMALAKEEDEASKERLEKLRSELADQKEKLAELTTRWQNEKNAIDVVRELKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQA+ARE VMLKEEVGPDDIAD Sbjct 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAEARENVMLKEEVGPDDIAD 540 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VVSAWTGIPAGR+LEGETAKLLRMEDELGKRVIGQ+ AVTAVSDAVRR+RAGV+DPNRPT Sbjct 541 VVSAWTGIPAGRMLEGETAKLLRMEDELGKRVIGQRKAVTAVSDAVRRARAGVADPNRPT 600 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 G+FMFLGPTGVGKTELAKALA+FLFDDERAMVRIDMSEYGEKH+VARL+GAPPGY+GY+ Sbjct 601 GSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYIGYDQ 660 Query 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 GGQLTEAVRRRPYTV+LFDEIEKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTILILTS Sbjct 661 GGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTS 720 Query 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 NLGSGG+ EQV+AAVR+ FKPEFINRLDDV++F GL P ELV IVDIQLAQL KRLAQRR Sbjct 721 NLGSGGTEEQVMAAVRSAFKPEFINRLDDVIVFAGLEPGELVAIVDIQLAQLQKRLAQRR 780 Query 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 L L+VSLPAK+WLA RGFDPVYGARPLRRLVQQAIGDQLAK+LLAG VHDGDTVPVNVSP Sbjct 781 LTLEVSLPAKQWLAHRGFDPVYGARPLRRLVQQAIGDQLAKLLLAGDVHDGDTVPVNVSP 840 Query 841 DADSLILG 848 D DSLILG Sbjct 841 DGDSLILG 848 >gi|118470039|ref|YP_885138.1| chaperone ClpB [Mycobacterium smegmatis str. MC2 155] gi|118171326|gb|ABK72222.1| chaperone ClpB [Mycobacterium smegmatis str. MC2 155] Length=848 Score = 1566 bits (4054), Expect = 0.0, Method: Compositional matrix adjust. Identities = 766/848 (91%), Positives = 822/848 (97%), Gaps = 0/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTKTQAALT+ALQAAS+AGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPAT+ Sbjct 1 MDSFNPTTKTQAALTSALQAASSAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATI 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 R ETQRLLDRLP A+GAS+QPQLSRESLAAITTAQ LATE+DDEYVSTEH+MVGLATGDS Sbjct 61 RTETQRLLDRLPSASGASSQPQLSRESLAAITTAQNLATEMDDEYVSTEHLMVGLATGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 +VAKLLTGHGASPQALREAFVKVRGSARVTSP+PE TYQAL+KYSTDLTARAREGKLDPV Sbjct 121 EVAKLLTGHGASPQALREAFVKVRGSARVTSPDPEGTYQALEKYSTDLTARAREGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKT++AL Sbjct 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTVIAL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAG+KYRGEFEERLKAVLDDIKNSAGQ+ITFIDELHTIVGAGATGE AMDAGNMI Sbjct 241 DLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQVITFIDELHTIVGAGATGESAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTLDEYRK+IEKDAALERRFQQV+VGEPSVEDT+GILRGLKDRYEV Sbjct 301 KPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDTVGILRGLKDRYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV Sbjct 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMAL KEEDEAS +RL KLR+ELAD KEKL+ELTTRWQNEKNAI +VR+LKEQL Sbjct 421 RRLEIEEMALEKEEDEASKDRLEKLRAELADHKEKLSELTTRWQNEKNAINVVRELKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 + LRGE++RAERDGDLAKAAELRYGRIPEVEKKLDAALP A+ARE +MLKEEVGPDDIA+ Sbjct 481 DTLRGEADRAERDGDLAKAAELRYGRIPEVEKKLDAALPAAEARENLMLKEEVGPDDIAE 540 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VV AWTGIP+GR+LEGETAKLLRME+ELGKRV+GQ+ AV AVSDAVRRSRAGV+DPNRPT Sbjct 541 VVEAWTGIPSGRMLEGETAKLLRMEEELGKRVVGQRKAVQAVSDAVRRSRAGVADPNRPT 600 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 G+FMFLGPTGVGKTELAKALA+FLFDDERAMVRIDMSEYGEKH+VARL+GAPPGY+GY+ Sbjct 601 GSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYIGYDQ 660 Query 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 GGQLTEAVRRRPYTV+LFDEIEKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTILILTS Sbjct 661 GGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTS 720 Query 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 NLG+GG+ +QV+AAVR+ FKPEFINRLDDV+IF+GLNPEELV+IVDIQLAQL KRL QRR Sbjct 721 NLGAGGNEDQVMAAVRSAFKPEFINRLDDVIIFDGLNPEELVQIVDIQLAQLAKRLEQRR 780 Query 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 L L+VSLPAK+WL QRGFDP+YGARPLRRLVQQAIGDQLAKMLLAG+VHDGD VPVNVSP Sbjct 781 LTLEVSLPAKKWLGQRGFDPLYGARPLRRLVQQAIGDQLAKMLLAGEVHDGDIVPVNVSP 840 Query 841 DADSLILG 848 D +SL+LG Sbjct 841 DGESLVLG 848 >gi|118466771|ref|YP_883920.1| chaperone ClpB [Mycobacterium avium 104] gi|254777230|ref|ZP_05218746.1| chaperone ClpB [Mycobacterium avium subsp. avium ATCC 25291] gi|118168058|gb|ABK68955.1| chaperone ClpB [Mycobacterium avium 104] gi|336460294|gb|EGO39195.1| ATP-dependent chaperone ClpB [Mycobacterium avium subsp. paratuberculosis S397] Length=848 Score = 1558 bits (4034), Expect = 0.0, Method: Compositional matrix adjust. Identities = 785/848 (93%), Positives = 825/848 (98%), Gaps = 0/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTKTQAALTAALQAAS AGNPEIRPAHLLMALLTQ DGIAAPLLEAVGVEPAT+ Sbjct 1 MDSFNPTTKTQAALTAALQAASAAGNPEIRPAHLLMALLTQADGIAAPLLEAVGVEPATI 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 RAE +R+L RLPQA+GAS+QPQLSRESLAAITTAQ LATELDDEYVSTEH+MVGLATGDS Sbjct 61 RAEAERMLARLPQASGASSQPQLSRESLAAITTAQHLATELDDEYVSTEHLMVGLATGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DVAKLLTGHGASPQALREAFVKVRGSARVTSP+PEATYQAL+KYSTDLTARAREGKLDPV Sbjct 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPDPEATYQALEKYSTDLTARAREGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKT++AL Sbjct 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTVIAL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAG+KYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI Sbjct 241 DLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTLDEYRK+IEKDAALERRFQQV+VGEPSVEDT+GILRGLKDRYEV Sbjct 301 KPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDTVGILRGLKDRYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRL+MEIDSRPVEIDEVERLV Sbjct 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLKMEIDSRPVEIDEVERLV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMAL+KEEDEAS ERL KLRSELADQKEKLAELTTRWQNEKNAI++VR+LKEQL Sbjct 421 RRLEIEEMALAKEEDEASKERLEKLRSELADQKEKLAELTTRWQNEKNAIDVVRELKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 E LRGES+RAERDGDLAKAAELRYGRIPEVEKKL+AALPQA+ARE VMLKEEVGPDDIA+ Sbjct 481 ETLRGESDRAERDGDLAKAAELRYGRIPEVEKKLEAALPQAEARENVMLKEEVGPDDIAE 540 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VVSAWTGIPAGR+LEGETAKLLRMEDELGKRV+GQK AV AVSDAVRR+RAGV+DPNRPT Sbjct 541 VVSAWTGIPAGRMLEGETAKLLRMEDELGKRVVGQKRAVQAVSDAVRRARAGVADPNRPT 600 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 G+FMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKH+VARL+GAPPGY+GY+ Sbjct 601 GSFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYIGYDQ 660 Query 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 GGQLTEAVRRRPYTV+LFDEIEKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTILILTS Sbjct 661 GGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTS 720 Query 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 NLGSGGS EQV+AAVR+ FKPEFINRLDDV+IF GL P ELV+IVDIQLAQL KRLAQRR Sbjct 721 NLGSGGSEEQVMAAVRSAFKPEFINRLDDVIIFHGLEPGELVQIVDIQLAQLQKRLAQRR 780 Query 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 L L+VSLPAK+WLA RGFDPVYGARPLRRLVQQAIGDQLAK LLAGQVHDGDTVPVNVSP Sbjct 781 LTLEVSLPAKQWLAHRGFDPVYGARPLRRLVQQAIGDQLAKQLLAGQVHDGDTVPVNVSP 840 Query 841 DADSLILG 848 D DSLILG Sbjct 841 DGDSLILG 848 >gi|41409951|ref|NP_962787.1| ClpB [Mycobacterium avium subsp. paratuberculosis K-10] gi|54035777|sp|Q73T66.1|CLPB_MYCPA RecName: Full=Chaperone protein ClpB gi|41398784|gb|AAS06403.1| ClpB [Mycobacterium avium subsp. paratuberculosis K-10] Length=848 Score = 1556 bits (4029), Expect = 0.0, Method: Compositional matrix adjust. Identities = 784/848 (93%), Positives = 825/848 (98%), Gaps = 0/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTKTQAALTAALQAAS AGNPEIRPAHLLMALLTQ DGIAAPLLEAVGVEPAT+ Sbjct 1 MDSFNPTTKTQAALTAALQAASAAGNPEIRPAHLLMALLTQADGIAAPLLEAVGVEPATI 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 RAE +R+L RLPQA+GAS+QPQLSRESLAAITTAQ LATELDDEYVSTEH+MVGLATGDS Sbjct 61 RAEAERMLARLPQASGASSQPQLSRESLAAITTAQHLATELDDEYVSTEHLMVGLATGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DVAKLLTGHGASPQALREAFVKVRGSARVTSP+PEATYQAL+KYSTDLTARAREGKLDPV Sbjct 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPDPEATYQALEKYSTDLTARAREGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKT++AL Sbjct 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTVIAL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAG+KYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI Sbjct 241 DLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTLDEYRK+IEKDAALERRFQQV+VGEPSVEDT+GILRGLKDRYEV Sbjct 301 KPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDTVGILRGLKDRYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRL+MEIDSRPVEIDEVERLV Sbjct 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLKMEIDSRPVEIDEVERLV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMAL+KEEDEAS ERL KLRSELADQKEKLAELTTRWQNEKNAI++VR+LKEQL Sbjct 421 RRLEIEEMALAKEEDEASKERLEKLRSELADQKEKLAELTTRWQNEKNAIDVVRELKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 E LRGES+RAERDGDLAKAAELRYGRIPEVEKKL+AALPQA+ARE VMLKEEVGPDDIA+ Sbjct 481 ETLRGESDRAERDGDLAKAAELRYGRIPEVEKKLEAALPQAEARENVMLKEEVGPDDIAE 540 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VVSAWTGIPAGR+LEGETAKLLRMEDELGKRV+GQK AV AVSDAVRR+RAGV+DPNRPT Sbjct 541 VVSAWTGIPAGRMLEGETAKLLRMEDELGKRVVGQKRAVQAVSDAVRRARAGVADPNRPT 600 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 G+FMFLGPTGVGKTELAKALADFLFDD+RAMVRIDMSEYGEKH+VARL+GAPPGY+GY+ Sbjct 601 GSFMFLGPTGVGKTELAKALADFLFDDKRAMVRIDMSEYGEKHSVARLVGAPPGYIGYDQ 660 Query 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 GGQLTEAVRRRPYTV+LFDEIEKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTILILTS Sbjct 661 GGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTS 720 Query 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 NLGSGGS EQV+AAVR+ FKPEFINRLDDV+IF GL P ELV+IVDIQLAQL KRLAQRR Sbjct 721 NLGSGGSEEQVMAAVRSAFKPEFINRLDDVIIFHGLEPGELVQIVDIQLAQLQKRLAQRR 780 Query 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 L L+VSLPAK+WLA RGFDPVYGARPLRRLVQQAIGDQLAK LLAGQVHDGDTVPVNVSP Sbjct 781 LTLEVSLPAKQWLAHRGFDPVYGARPLRRLVQQAIGDQLAKQLLAGQVHDGDTVPVNVSP 840 Query 841 DADSLILG 848 D DSLILG Sbjct 841 DGDSLILG 848 >gi|108797458|ref|YP_637655.1| ATPase AAA-2 [Mycobacterium sp. MCS] gi|119866543|ref|YP_936495.1| ATPase [Mycobacterium sp. KMS] gi|126433079|ref|YP_001068770.1| ATPase [Mycobacterium sp. JLS] gi|108767877|gb|ABG06599.1| ATPase AAA-2 [Mycobacterium sp. MCS] gi|119692632|gb|ABL89705.1| ATPase AAA-2 domain protein [Mycobacterium sp. KMS] gi|126232879|gb|ABN96279.1| ATPase AAA-2 domain protein [Mycobacterium sp. JLS] Length=848 Score = 1552 bits (4019), Expect = 0.0, Method: Compositional matrix adjust. Identities = 761/848 (90%), Positives = 819/848 (97%), Gaps = 0/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTKTQAALT+ALQAAS AGNP+I PAHLLMALLTQNDGIAAPLLEAVGVEPATV Sbjct 1 MDSFNPTTKTQAALTSALQAASAAGNPQIAPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 RAETQRLLDRLP A+GAS+QPQLSRESLAA+T AQQLATE+DDEYVSTEH+MVGLATGDS Sbjct 61 RAETQRLLDRLPSASGASSQPQLSRESLAAVTAAQQLATEIDDEYVSTEHLMVGLATGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DVAKLLTGHGASPQALREAFVKVRGSARVTSP+PE +YQAL+KYSTDLTARAREG+LDPV Sbjct 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPDPEGSYQALEKYSTDLTARAREGQLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRD EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLR KT+++L Sbjct 181 IGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKTVISL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATG+ +MDAGNMI Sbjct 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGDSSMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTLDEYRK+IEKDAALERRFQQVYVGEPSVEDT+GILRGLK+RYEV Sbjct 301 KPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVYVGEPSVEDTVGILRGLKERYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALV+AATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV Sbjct 361 HHGVRITDSALVSAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMAL+KEED+AS ERL KLR ELAD KEKLAELTTRWQNEKNAI+IVR+LKEQL Sbjct 421 RRLEIEEMALAKEEDDASKERLEKLRGELADYKEKLAELTTRWQNEKNAIDIVRELKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 EALRGE++RAERDG+L KAAELRYGRIPEVEKKLDAA+PQA+AR+ VMLKEEVGPDDIA+ Sbjct 481 EALRGEADRAERDGNLEKAAELRYGRIPEVEKKLDAAVPQAEARDDVMLKEEVGPDDIAE 540 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VVSAWTGIPAGR+LEGETAKLLRMEDELGKRV+GQ+ AV AVSDAVRR+RAGV+DPNRPT Sbjct 541 VVSAWTGIPAGRMLEGETAKLLRMEDELGKRVVGQRRAVQAVSDAVRRTRAGVADPNRPT 600 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 G+FMFLGPTGVGKTELAKALA+FLFDDERAMVRIDMSEYGEKH+VARL+GAPPGY+GY+ Sbjct 601 GSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYIGYDQ 660 Query 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTILILTS Sbjct 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTS 720 Query 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 NLG+GG+ + V+AAVR+ FKPEFINRLDDV++F+GLNPEELV IVDIQL QL KRLAQRR Sbjct 721 NLGAGGTEDMVMAAVRSAFKPEFINRLDDVIVFDGLNPEELVSIVDIQLQQLAKRLAQRR 780 Query 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 L L+VSLPAK+WLA RGFDP+YGARPLRRL+QQ+IGDQLAKMLLAG VHDGD VPVNVSP Sbjct 781 LTLEVSLPAKKWLADRGFDPLYGARPLRRLIQQSIGDQLAKMLLAGDVHDGDIVPVNVSP 840 Query 841 DADSLILG 848 D +SL+LG Sbjct 841 DGESLVLG 848 >gi|342859150|ref|ZP_08715804.1| chaperone ClpB [Mycobacterium colombiense CECT 3035] gi|342133391|gb|EGT86594.1| chaperone ClpB [Mycobacterium colombiense CECT 3035] Length=848 Score = 1541 bits (3991), Expect = 0.0, Method: Compositional matrix adjust. Identities = 775/848 (92%), Positives = 821/848 (97%), Gaps = 0/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTKTQAALTAALQAAS AGNPEIRPAHLLMALLTQ DGIAAPLLEAVGV+PA + Sbjct 1 MDSFNPTTKTQAALTAALQAASAAGNPEIRPAHLLMALLTQADGIAAPLLEAVGVDPAVI 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 RAET+R+L+RLPQ +GAS+QPQLSRESLAA+TTAQQLATE++DEYVSTEH++VGLATGDS Sbjct 61 RAETERVLERLPQISGASSQPQLSRESLAAVTTAQQLATEMNDEYVSTEHLLVGLATGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DVAKLLTGHGASPQALR+ FVKVRGS RVTSPEPEATYQAL+KYSTDLT RAREGKLDPV Sbjct 121 DVAKLLTGHGASPQALRDGFVKVRGSGRVTSPEPEATYQALEKYSTDLTERAREGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKT+++L Sbjct 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTVISL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAG+KYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI Sbjct 241 DLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTLDEYRK+IEKDAALERRFQQV VGEPSVEDT+GILRGLKDRYEV Sbjct 301 KPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKDRYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRL+MEIDSRPVEIDEVERLV Sbjct 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLKMEIDSRPVEIDEVERLV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMAL+KEEDEAS ERL KLRSELADQKEKL+ELTTRWQNEKNAI++VR+LKEQL Sbjct 421 RRLEIEEMALAKEEDEASKERLEKLRSELADQKEKLSELTTRWQNEKNAIDVVRELKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 + LRGESERAERDGDLAKAAELRYGRIPEVEKKL+AALPQA+ARE VMLKEEVGPDDIA+ Sbjct 481 DTLRGESERAERDGDLAKAAELRYGRIPEVEKKLEAALPQAEARENVMLKEEVGPDDIAE 540 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VVSAWTGIPAGR+LEGETAKLLRMEDELGKRVIGQK AVTAVSDAVRRSRAGV+DPNRPT Sbjct 541 VVSAWTGIPAGRMLEGETAKLLRMEDELGKRVIGQKRAVTAVSDAVRRSRAGVADPNRPT 600 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 G+FMFLGPTGVGKTELAKALA+FLFDDERAMVRIDMSEYGEKH+VARL+GAPPGY+GY+ Sbjct 601 GSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYIGYDQ 660 Query 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 GGQLTEAVRRRPYTV+LFDEIEKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTILILTS Sbjct 661 GGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTS 720 Query 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 NLGSGGS EQV+AAVR+ FKPEFINRLDDV+IF GL P ELV IVDIQLAQL KRLAQRR Sbjct 721 NLGSGGSEEQVMAAVRSAFKPEFINRLDDVIIFHGLEPGELVSIVDIQLAQLQKRLAQRR 780 Query 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 L L+VSLPAK+WLA RGFDPVYGARPLRRLVQQAIGDQLAK LLAG VHDGDTVPVNVSP Sbjct 781 LTLEVSLPAKQWLAHRGFDPVYGARPLRRLVQQAIGDQLAKQLLAGDVHDGDTVPVNVSP 840 Query 841 DADSLILG 848 D +SLILG Sbjct 841 DGESLILG 848 >gi|333988986|ref|YP_004521600.1| endopeptidase ATP binding protein (chain B) ClpB [Mycobacterium sp. JDM601] gi|333484954|gb|AEF34346.1| endopeptidase ATP binding protein (chain B) ClpB [Mycobacterium sp. JDM601] Length=848 Score = 1532 bits (3967), Expect = 0.0, Method: Compositional matrix adjust. Identities = 767/848 (91%), Positives = 819/848 (97%), Gaps = 0/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTKTQAALTAALQAA+ AGNPEIRPAHLL ALLTQNDGIA PLLEAVGV PAT+ Sbjct 1 MDSFNPTTKTQAALTAALQAATAAGNPEIRPAHLLQALLTQNDGIAVPLLEAVGVNPATI 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 R E Q LLDRLPQA+GAS QPQLSRESLAAIT AQQLATELDDEYVSTEH+MVGLATGDS Sbjct 61 RTENQHLLDRLPQASGASAQPQLSRESLAAITVAQQLATELDDEYVSTEHLMVGLATGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DVAK+LTGHGASPQALR+ FVKVRGSARVT+P+PEA+YQAL+KYSTDLTARAREGKLDPV Sbjct 121 DVAKVLTGHGASPQALRDGFVKVRGSARVTNPDPEASYQALEKYSTDLTARAREGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRD EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKT+V+L Sbjct 181 IGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTVVSL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAG+KYRGEFEERLKAVLD+IKN+AGQ+ITFIDELHTIVGAGATGEGAMDAGNMI Sbjct 241 DLGSMVAGAKYRGEFEERLKAVLDEIKNAAGQVITFIDELHTIVGAGATGEGAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTL+EYRK+IEKDAALERRFQQVYVGEPS EDTIGILRGLK+RYEV Sbjct 301 KPMLARGELRLVGATTLEEYRKYIEKDAALERRFQQVYVGEPSAEDTIGILRGLKERYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV Sbjct 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMALSKEED+ASA+RL KLR+ELAD KEKLAELT RW NEKNAI++VR+LKEQL Sbjct 421 RRLEIEEMALSKEEDDASADRLEKLRAELADYKEKLAELTARWHNEKNAIDVVRELKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 E LRGES+RAERDGDLAKAAELRYGRIPEVEKKL+AALP+A+AREQVMLKEEVGPDDIAD Sbjct 481 ETLRGESDRAERDGDLAKAAELRYGRIPEVEKKLEAALPKAEAREQVMLKEEVGPDDIAD 540 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VVSAWTGIPAGRLLEGETAKLLRMEDEL KRV+GQ+ V AVSDAVRRSRAGV+DPNRPT Sbjct 541 VVSAWTGIPAGRLLEGETAKLLRMEDELAKRVVGQRKPVQAVSDAVRRSRAGVADPNRPT 600 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 G+F+FLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKH+VARL+GAPPGY+GY+ Sbjct 601 GSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYIGYDQ 660 Query 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 GGQLTEAVRRRPYTVVLFDE+EKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTILILTS Sbjct 661 GGQLTEAVRRRPYTVVLFDEVEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTS 720 Query 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 NLGSGG+ E+V+AAVRA FKPEFINRLDDVLIFEGLNPEELVRIVDIQL QL KRLAQRR Sbjct 721 NLGSGGTDEEVMAAVRAAFKPEFINRLDDVLIFEGLNPEELVRIVDIQLEQLDKRLAQRR 780 Query 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 L L+VSLPAK+WLA+RGFDP+YGARPLRRL+QQAIGDQLAK+LLAG+VHDGDTVPVN+SP Sbjct 781 LALEVSLPAKKWLAERGFDPIYGARPLRRLIQQAIGDQLAKLLLAGEVHDGDTVPVNISP 840 Query 841 DADSLILG 848 D D+LILG Sbjct 841 DGDALILG 848 >gi|120401674|ref|YP_951503.1| ATPase [Mycobacterium vanbaalenii PYR-1] gi|119954492|gb|ABM11497.1| ATPase AAA-2 domain protein [Mycobacterium vanbaalenii PYR-1] Length=848 Score = 1531 bits (3964), Expect = 0.0, Method: Compositional matrix adjust. Identities = 756/848 (90%), Positives = 815/848 (97%), Gaps = 0/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTKTQAALT+ALQAA+ AGNP+I PAHLLMALLTQNDGIAAPLLEAVGVEPAT+ Sbjct 1 MDSFNPTTKTQAALTSALQAATAAGNPQIAPAHLLMALLTQNDGIAAPLLEAVGVEPATI 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 RAETQRLLDRLP ATG+S+QPQL+ +++AAIT A LA+E+DDEYVSTEH++VGLATGD+ Sbjct 61 RAETQRLLDRLPSATGSSSQPQLAPQAIAAITAATHLASEMDDEYVSTEHLLVGLATGDA 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 D AKLLTGHGASPQALREAFVKVRGSARVTSP+PE TYQAL+KYSTDLTARAREGKLDPV Sbjct 121 DTAKLLTGHGASPQALREAFVKVRGSARVTSPDPEGTYQALEKYSTDLTARAREGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRI+AGDVPESLRDKT+V+L Sbjct 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIIAGDVPESLRDKTVVSL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAG+KYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGE AMDAGNMI Sbjct 241 DLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGESAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTLDEYRK+IEKDAALERRFQQV VGEPSVEDT+GILRGLK+RYEV Sbjct 301 KPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVMVGEPSVEDTVGILRGLKERYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALV+AATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV Sbjct 361 HHGVRITDSALVSAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMAL KE D AS +RL KLRSELADQKEKL+ELTTRWQNEK AI++VR+LKEQL Sbjct 421 RRLEIEEMALEKESDAASKDRLEKLRSELADQKEKLSELTTRWQNEKGAIDVVRELKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 E LRG ++RAERDGDLAKAAELRYGRIPEVEKKLDAA+PQA+AR+ VMLKEEVGPDDIAD Sbjct 481 EELRGAADRAERDGDLAKAAELRYGRIPEVEKKLDAAVPQAEARDNVMLKEEVGPDDIAD 540 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VVSAWTGIPAGR+LEGETAKLLRMEDELGKRV+GQK AV AVSDAVRRSRAGV+DPNRPT Sbjct 541 VVSAWTGIPAGRMLEGETAKLLRMEDELGKRVVGQKNAVQAVSDAVRRSRAGVADPNRPT 600 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 G+FMFLGPTGVGKTELAKALA+FLFDDERAMVRIDMSEYGEKH+VARL+GAPPGYVGY+ Sbjct 601 GSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYVGYDQ 660 Query 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 GGQLTEAVRRRPYTV+LFDEIEKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTILILTS Sbjct 661 GGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTS 720 Query 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 NLG+GG+ EQV+AAVRA FKPEFINRLDDV++F+ LNPE+LV IVDIQLAQL KRLAQRR Sbjct 721 NLGAGGNEEQVMAAVRAAFKPEFINRLDDVIMFDALNPEQLVSIVDIQLAQLQKRLAQRR 780 Query 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 L L+VSLPAK+WLA+RGFDP+YGARPLRRL+QQAIGDQLAK+LLAG VHDGD VPVNVSP Sbjct 781 LTLEVSLPAKKWLAERGFDPLYGARPLRRLIQQAIGDQLAKLLLAGDVHDGDVVPVNVSP 840 Query 841 DADSLILG 848 D DSL+LG Sbjct 841 DGDSLVLG 848 >gi|145220850|ref|YP_001131528.1| ATPase [Mycobacterium gilvum PYR-GCK] gi|315442195|ref|YP_004075074.1| ATP-dependent chaperone ClpB [Mycobacterium sp. Spyr1] gi|145213336|gb|ABP42740.1| ATPase AAA-2 domain protein [Mycobacterium gilvum PYR-GCK] gi|315260498|gb|ADT97239.1| ATP-dependent chaperone ClpB [Mycobacterium sp. Spyr1] Length=848 Score = 1528 bits (3956), Expect = 0.0, Method: Compositional matrix adjust. Identities = 752/848 (89%), Positives = 818/848 (97%), Gaps = 0/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTKTQAALT+ALQAA+ AGNP+I PAHLLMALLTQNDGIAAPLLEAVGVEPAT+ Sbjct 1 MDSFNPTTKTQAALTSALQAATAAGNPQITPAHLLMALLTQNDGIAAPLLEAVGVEPATI 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 RAETQRLLDRLP ATG+++QPQLS ++AAIT A LATE+DDEYVSTEH++VGLATGDS Sbjct 61 RAETQRLLDRLPSATGSASQPQLSPPAIAAITAATHLATEMDDEYVSTEHLLVGLATGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DVAK+LTGHGASPQALREAFVKVRGSARVT+P+PE TYQAL+KYSTDLTARAREGKLDPV Sbjct 121 DVAKVLTGHGASPQALREAFVKVRGSARVTNPDPEGTYQALEKYSTDLTARAREGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRD+EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKT+V+L Sbjct 181 IGRDHEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTVVSL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 D+GSMVAG+KYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGE AMDAGNMI Sbjct 241 DMGSMVAGAKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGESAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTLDEYRK+IEKDAALERRFQQV VGEPSVEDT+GILRGLKDRYEV Sbjct 301 KPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKDRYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDS+LVAAATLSDRYIT+RFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV Sbjct 361 HHGVRITDSSLVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMAL+KEED AS +RL KLR+ELAD+KE+LAELTTRWQNEK+AI++VR+LKEQL Sbjct 421 RRLEIEEMALAKEEDAASKDRLEKLRAELADKKEQLAELTTRWQNEKSAIDVVRELKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 E+LRGE++RAERDGDLAKAAELRYGRIPEVEKKLDAALP A+ARE VMLKEEVGPDDIA+ Sbjct 481 ESLRGEADRAERDGDLAKAAELRYGRIPEVEKKLDAALPHAEARENVMLKEEVGPDDIAE 540 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VV AWTGIPAGR+LEGETAKLLRME+ELGKRV+GQ+ AVTAVSDAVRRSRAGV+DPNRPT Sbjct 541 VVEAWTGIPAGRMLEGETAKLLRMEEELGKRVVGQRKAVTAVSDAVRRSRAGVADPNRPT 600 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 G+FMFLGPTGVGKTELAKALA+FLFDDERAMVRIDMSEYGEKH+VARL+GAPPGYVGY+ Sbjct 601 GSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYVGYDQ 660 Query 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 GGQLTEAVRRRPYTV+LFDEIEKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTILILTS Sbjct 661 GGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTS 720 Query 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 NLG+GGS EQV+AAVRA FKPEFINRLDDV++F+ L+PE+LV IVDIQL QL KRLAQRR Sbjct 721 NLGAGGSEEQVMAAVRAAFKPEFINRLDDVIMFDALDPEQLVSIVDIQLEQLAKRLAQRR 780 Query 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 L L+VSLPAK+WLA+RGFDP+YGARPLRRLVQQAIGDQLA+MLL+GQVHDGD VPVN+S Sbjct 781 LTLEVSLPAKKWLAERGFDPLYGARPLRRLVQQAIGDQLARMLLSGQVHDGDVVPVNLSA 840 Query 841 DADSLILG 848 D DSL+LG Sbjct 841 DGDSLVLG 848 >gi|15828345|ref|NP_302608.1| heat shock protein [Mycobacterium leprae TN] gi|221230822|ref|YP_002504238.1| heat shock protein [Mycobacterium leprae Br4923] gi|54035895|sp|Q9CB26.1|CLPB_MYCLE RecName: Full=Chaperone protein ClpB gi|13094038|emb|CAC32007.1| heat shock protein [Mycobacterium leprae] gi|219933929|emb|CAR72589.1| heat shock protein [Mycobacterium leprae Br4923] Length=848 Score = 1511 bits (3913), Expect = 0.0, Method: Compositional matrix adjust. Identities = 755/848 (90%), Positives = 807/848 (96%), Gaps = 0/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTK Q ALT+ALQAAS+AGNPEIRP HLL+A+L QNDGIAAPLLE VGVEP V Sbjct 1 MDSFNPTTKMQVALTSALQAASSAGNPEIRPVHLLLAMLMQNDGIAAPLLETVGVEPDIV 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 R E QRLL+RLPQA+G S+QPQLSRESLAAITTAQQLATE+DDEYVSTEH+M+GLA GDS Sbjct 61 RNEAQRLLERLPQASGCSSQPQLSRESLAAITTAQQLATEMDDEYVSTEHLMLGLAMGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DVAKLLTGHGASPQ LREAFVK+RGSARVTS +PE TYQAL+KYSTDLTA++ EGKLDPV Sbjct 121 DVAKLLTGHGASPQVLREAFVKIRGSARVTSSDPEFTYQALEKYSTDLTAQSGEGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKT+VAL Sbjct 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTLVAL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAG+KYRGEFE+RLK VLDDIK SAGQIITFIDELHTIVGAGATGE AMDAGNMI Sbjct 241 DLGSMVAGAKYRGEFEQRLKVVLDDIKFSAGQIITFIDELHTIVGAGATGESAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTLDEYR++IEKDAALERRFQQ++VGEPSVEDT+GILRGLKDRYEV Sbjct 301 KPMLARGELRLVGATTLDEYRRYIEKDAALERRFQQIFVGEPSVEDTVGILRGLKDRYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAA LSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV Sbjct 361 HHGVRITDSALVAAAALSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RR EIEEMAL EEDEAS ERL LR+ELADQKE+LAELT RWQNEKNAI++VR+LKEQL Sbjct 421 RRFEIEEMALVNEEDEASKERLETLRAELADQKERLAELTARWQNEKNAIDVVRELKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 E LRGESERAERDGDLAKAAELRYGRIPEVEKKL+AA+P AQARE VMLKEEVGPDDIA+ Sbjct 481 ETLRGESERAERDGDLAKAAELRYGRIPEVEKKLEAAVPTAQAREDVMLKEEVGPDDIAN 540 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRV+GQK AV AVSDAVRRSRAGV+DPNRPT Sbjct 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVVGQKKAVHAVSDAVRRSRAGVADPNRPT 600 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 G+F+FLGPTGVGKTELAKALADFLFDD+RAMVR+DMSEYGEKH+VARL+GAPPGY+G++ Sbjct 601 GSFLFLGPTGVGKTELAKALADFLFDDQRAMVRVDMSEYGEKHSVARLVGAPPGYIGHDQ 660 Query 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 GGQLTEAVRRRPYTVVLFDE+EKAH DVFDVLLQVLDEGRLTDG GRTVDFRNTI ILTS Sbjct 661 GGQLTEAVRRRPYTVVLFDEVEKAHSDVFDVLLQVLDEGRLTDGQGRTVDFRNTIPILTS 720 Query 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 NLGSGGS EQV+AAVR+ FKPEFINRLDDVLIF+GLNPEELVRIVDIQL QLGKRLAQRR Sbjct 721 NLGSGGSEEQVMAAVRSVFKPEFINRLDDVLIFDGLNPEELVRIVDIQLEQLGKRLAQRR 780 Query 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 LQL+VSLPAKRWLAQ GFDPVYGARPLRRLVQQAIGDQLAKMLLAG+VHDGDT+PVNV P Sbjct 781 LQLEVSLPAKRWLAQHGFDPVYGARPLRRLVQQAIGDQLAKMLLAGEVHDGDTLPVNVRP 840 Query 841 DADSLILG 848 D ++LILG Sbjct 841 DGEALILG 848 >gi|169631343|ref|YP_001704992.1| chaperone ClpB [Mycobacterium abscessus ATCC 19977] gi|169243310|emb|CAM64338.1| Chaperone ClpB [Mycobacterium abscessus] Length=848 Score = 1458 bits (3775), Expect = 0.0, Method: Compositional matrix adjust. Identities = 731/848 (87%), Positives = 796/848 (94%), Gaps = 0/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTKTQAALTAALQAA+TAGNPEIRPAHLL+ALL Q DGIAAPLL+AVGV+P +V Sbjct 1 MDSFNPTTKTQAALTAALQAATTAGNPEIRPAHLLVALLGQTDGIAAPLLQAVGVDPVSV 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 R E Q + DRLPQ + AS PQLSR+S+AA+T AQ LATEL+D+YVSTEH++VGLATGDS Sbjct 61 RNEAQAIADRLPQVSNASANPQLSRDSIAAVTAAQHLATELNDDYVSTEHLLVGLATGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 D+AKLL HGA+PQALR+AFV+VRGS RVTSPEPEAT+QAL+KYSTDLTARAREGKLDPV Sbjct 121 DIAKLLVNHGATPQALRDAFVQVRGSGRVTSPEPEATFQALEKYSTDLTARAREGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRD EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLR KT+++L Sbjct 181 IGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKTVISL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAG+KYRGEFEERLKAVLD+IKNSAGQ+ITFIDELHTIVGAGATGE AMDAGNMI Sbjct 241 DLGSMVAGAKYRGEFEERLKAVLDEIKNSAGQLITFIDELHTIVGAGATGESAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTLDEYRK+IEKDAALERRFQQV VGEPSVEDTIGILRG+K+RYE+ Sbjct 301 KPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVLVGEPSVEDTIGILRGIKERYEI 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAATLSDRYIT+RFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVER+V Sbjct 361 HHGVRITDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERVV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMALSKEEDEAS +RL KLR ELAD+KE+LAELT RWQNEK++I+ VRDLKEQL Sbjct 421 RRLEIEEMALSKEEDEASKQRLEKLRVELADKKERLAELTARWQNEKSSIDAVRDLKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 E L+GES+RAERDGDL KAAELRYGRIPE+EK+L+ ALP VMLKEEV PDD+AD Sbjct 481 ETLKGESDRAERDGDLGKAAELRYGRIPELEKQLEQALPGLDHDGNVMLKEEVSPDDVAD 540 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VVSAWTGIP GRL+EGETAKLLRMEDELGKRV+GQK AV AVSDAVRR+RAGV+DPNRPT Sbjct 541 VVSAWTGIPTGRLMEGETAKLLRMEDELGKRVVGQKKAVEAVSDAVRRARAGVADPNRPT 600 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 G+F+FLGPTGVGKTELAKALADFLFDDE AMVRIDMSEYGEKH+VARL+GAPPGYVGY+A Sbjct 601 GSFLFLGPTGVGKTELAKALADFLFDDEHAMVRIDMSEYGEKHSVARLVGAPPGYVGYDA 660 Query 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 GGQLTEAVRRRPYTVVLFDE+EKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTILILTS Sbjct 661 GGQLTEAVRRRPYTVVLFDEVEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTS 720 Query 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 NLG+GGS EQV+AAVRA FKPEFINRLDDVLIF+GLNPEELV+IVDIQL QL KRLAQRR Sbjct 721 NLGAGGSEEQVMAAVRAKFKPEFINRLDDVLIFDGLNPEELVQIVDIQLGQLQKRLAQRR 780 Query 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 L L+VS PAK+WLA RGFDP+YGARPLRRLVQQ+IGDQLAK LLAG+VHDGD VPVNVS Sbjct 781 LTLEVSAPAKKWLAARGFDPIYGARPLRRLVQQSIGDQLAKQLLAGEVHDGDVVPVNVSA 840 Query 841 DADSLILG 848 D +SLILG Sbjct 841 DGESLILG 848 >gi|226364997|ref|YP_002782780.1| chaperone ClpB [Rhodococcus opacus B4] gi|226243487|dbj|BAH53835.1| chaperone ClpB [Rhodococcus opacus B4] Length=850 Score = 1410 bits (3651), Expect = 0.0, Method: Compositional matrix adjust. Identities = 700/850 (83%), Positives = 773/850 (91%), Gaps = 2/850 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTKTQAA+TAALQ+AS+AGNP+IRPAHLL+ALL Q DGIAAPLL+AVGV+PA + Sbjct 1 MDSFNPTTKTQAAMTAALQSASSAGNPDIRPAHLLVALLDQTDGIAAPLLKAVGVDPAEI 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 E Q L+DRLP+ TGA+T PQL RE+LAA+TTAQ LATELDDEYVSTEH+MVGLA+G+S Sbjct 61 HREAQNLVDRLPKTTGATTTPQLGREALAALTTAQHLATELDDEYVSTEHLMVGLASGES 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DVA +L HGA+P+ALR+AF VRGSARVTSP+PE TYQAL+KYSTDLTA AR GKLDPV Sbjct 121 DVAGILRRHGATPEALRDAFTTVRGSARVTSPDPEGTYQALEKYSTDLTALARNGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLR K++++L Sbjct 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKSVISL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAG+KYRGEFEERLKAVLDDIKNSAGQ+ITFIDELHTIVGAGATGE AMDAGNMI Sbjct 241 DLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQVITFIDELHTIVGAGATGESAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTL+EYRK+IEKDAALERRFQQV VGEPSVEDT+GILRGLK+RYEV Sbjct 301 KPMLARGELRLVGATTLEEYRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKERYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAATLSDRYIT+RFLPDKAIDLVDEAASRLRMEIDSRP EID VER+V Sbjct 361 HHGVRITDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPEEIDTVERIV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMAL KE D AS +RL KLR ELAD++EKL +LTTRWQNEK AI+ VR +KEQL Sbjct 421 RRLEIEEMALQKESDAASKDRLEKLRQELADEREKLNQLTTRWQNEKQAIDSVRGVKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAAL--PQAQAREQVMLKEEVGPDDI 538 E LRGE ERAERDGDL +AAELRYGRIP++EK+L+ A A A VMLKEEVGPDD+ Sbjct 481 ETLRGEEERAERDGDLGRAAELRYGRIPQLEKELEQAARDSGAAADGDVMLKEEVGPDDV 540 Query 539 ADVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNR 598 ADVV+AWTGIPAGR++EGETAKLLRME ELGKRV+GQ+ AV AVSDAVRR+RAGV+DPNR Sbjct 541 ADVVAAWTGIPAGRMMEGETAKLLRMESELGKRVVGQEEAVVAVSDAVRRARAGVADPNR 600 Query 599 PTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGY 658 PTG+F+FLGPTGVGKTELAK+LADFLFDDERAMVRIDMSEY EKH+VARL+GAPPGYVGY Sbjct 601 PTGSFLFLGPTGVGKTELAKSLADFLFDDERAMVRIDMSEYSEKHSVARLVGAPPGYVGY 660 Query 659 EAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILIL 718 EAGGQLTEAVRRRPYTVVLFDE+EKAHPDVFD+LL VLDEGRLTDG GRTVDFRNTILIL Sbjct 661 EAGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLAVLDEGRLTDGQGRTVDFRNTILIL 720 Query 719 TSNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQ 778 TSNLG+GGS EQV+ AVR FKPEFINRLDDV+IFE L E+L IVDIQL QL +RLA Sbjct 721 TSNLGAGGSREQVMDAVRHAFKPEFINRLDDVVIFEPLTEEQLESIVDIQLDQLSRRLAA 780 Query 779 RRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNV 838 RRL L VS A+ WLA RG+DP+YGARPLRRL+QQAIGDQLAK+LLAG V DGDTVPV V Sbjct 781 RRLTLDVSDSARFWLAVRGYDPMYGARPLRRLIQQAIGDQLAKLLLAGDVKDGDTVPVKV 840 Query 839 SPDADSLILG 848 S D+L+LG Sbjct 841 SETGDALVLG 850 >gi|111022480|ref|YP_705452.1| ATP-binding subunit of heat shock protein ClpB [Rhodococcus jostii RHA1] gi|110822010|gb|ABG97294.1| ATP-binding subunit of heat shock protein ClpB [Rhodococcus jostii RHA1] Length=850 Score = 1409 bits (3648), Expect = 0.0, Method: Compositional matrix adjust. Identities = 700/850 (83%), Positives = 772/850 (91%), Gaps = 2/850 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTKTQAA+TAALQ+AS+AGNP+IRPAHLL+ALL Q DGIAAPLL+AVGV+P V Sbjct 1 MDSFNPTTKTQAAMTAALQSASSAGNPDIRPAHLLVALLDQTDGIAAPLLKAVGVDPTVV 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 E Q L+DRLP+ TGA+T PQL RE+LAA+T AQ LATELDDEYVSTEH+MVGLA+G+S Sbjct 61 HREGQDLVDRLPKTTGATTTPQLGREALAALTAAQHLATELDDEYVSTEHLMVGLASGES 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DVA LL HGA+P+ALR+AF VRGSARVTSP+PE TYQAL+KYSTDLTA AR GKLDPV Sbjct 121 DVAGLLKRHGATPEALRDAFTTVRGSARVTSPDPEGTYQALEKYSTDLTALARNGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLR K++++L Sbjct 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKSVISL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAG+KYRGEFEERLKAVLDDIKNSAGQ+ITFIDELHTIVGAGATGE AMDAGNMI Sbjct 241 DLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQVITFIDELHTIVGAGATGESAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTL+EYRK+IEKDAALERRFQQV VGEPSVEDT+GILRGLK+RYEV Sbjct 301 KPMLARGELRLVGATTLEEYRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKERYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAATLSDRYIT+RFLPDKAIDLVDEAASRLRMEIDSRP EID VER+V Sbjct 361 HHGVRITDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPEEIDTVERIV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMAL KE D AS +RL KLR ELAD++EKL +LTTRWQNEK AI+ VR +KEQL Sbjct 421 RRLEIEEMALQKESDAASKDRLEKLRQELADEREKLNQLTTRWQNEKQAIDSVRGVKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQ--AQAREQVMLKEEVGPDDI 538 E LRGE ERAERDGDL +AAELRYGRIP++EK+L+ A + A A VMLKEEVGPDD+ Sbjct 481 ETLRGEEERAERDGDLGRAAELRYGRIPQLEKELEQAARESGAAADGDVMLKEEVGPDDV 540 Query 539 ADVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNR 598 ADVV+AWTGIPAGR++EGETAKLLRME ELGKRV+GQ+ AV AVSDAVRR+RAGV+DPNR Sbjct 541 ADVVAAWTGIPAGRMMEGETAKLLRMESELGKRVVGQEEAVVAVSDAVRRARAGVADPNR 600 Query 599 PTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGY 658 PTG+F+FLGPTGVGKTELAK+LADFLFDDERAMVRIDMSEY EKH+VARL+GAPPGYVGY Sbjct 601 PTGSFLFLGPTGVGKTELAKSLADFLFDDERAMVRIDMSEYSEKHSVARLVGAPPGYVGY 660 Query 659 EAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILIL 718 EAGGQLTEAVRRRPYTVVLFDE+EKAHPDVFD+LL VLDEGRLTDG GRTVDFRNTILIL Sbjct 661 EAGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLAVLDEGRLTDGQGRTVDFRNTILIL 720 Query 719 TSNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQ 778 TSNLG+GGS EQV+ AVR FKPEFINRLDDV+IFE L E+L IVDIQL QL +RLA Sbjct 721 TSNLGAGGSREQVMDAVRHAFKPEFINRLDDVVIFESLTEEQLESIVDIQLDQLSRRLAA 780 Query 779 RRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNV 838 RRL L VS A+ WLA RG+DP+YGARPLRRL+QQAIGDQLAK+LLAG V DGDTVPV V Sbjct 781 RRLTLDVSDSARFWLAVRGYDPMYGARPLRRLIQQAIGDQLAKLLLAGDVKDGDTVPVKV 840 Query 839 SPDADSLILG 848 S D+L+LG Sbjct 841 SETGDALVLG 850 >gi|312141323|ref|YP_004008659.1| clp peptidase ATP-binding subunit clpb [Rhodococcus equi 103S] gi|325673839|ref|ZP_08153529.1| chaperone protein ClpB [Rhodococcus equi ATCC 33707] gi|311890662|emb|CBH49981.1| putative Clp peptidase ATP-binding subunit ClpB [Rhodococcus equi 103S] gi|325555104|gb|EGD24776.1| chaperone protein ClpB [Rhodococcus equi ATCC 33707] Length=850 Score = 1401 bits (3626), Expect = 0.0, Method: Compositional matrix adjust. Identities = 704/850 (83%), Positives = 778/850 (92%), Gaps = 2/850 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSF+PTTKTQAALTAALQ+A+ AGNP+IRPAHLL+ALL Q DGIAAPLL+AVGV+P V Sbjct 1 MDSFSPTTKTQAALTAALQSAAAAGNPDIRPAHLLVALLDQTDGIAAPLLKAVGVDPTVV 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 R E Q ++DRLP+ATGA+TQPQL RE+LAAIT+AQ LATELDDEYVSTEHVMVGLA DS Sbjct 61 RREAQVIVDRLPRATGATTQPQLGREALAAITSAQHLATELDDEYVSTEHVMVGLAAEDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DVAKLL GHGA+P+ALR+AF VRGSARVTSP+PE +YQAL+KYSTDLTARAREGKLDPV Sbjct 121 DVAKLLVGHGATPEALRDAFTAVRGSARVTSPDPEGSYQALEKYSTDLTARAREGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRD EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLR KT+++L Sbjct 181 IGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKTVISL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAG+KYRGEFEERLKAVLDDIKNSAGQ+ITFIDELHTIVGAGATGE AMDAGNMI Sbjct 241 DLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQVITFIDELHTIVGAGATGESAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTL+EYR++IEKDAALERRFQQV VGEPSVEDT+GILRGLK+RYEV Sbjct 301 KPMLARGELRLVGATTLEEYRQYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKERYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAATLSDRYIT+RFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVER V Sbjct 361 HHGVRITDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERTV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMAL+KE D AS ERL KLR ELAD +EKL +LT RWQNEKNAI+ VR++KEQL Sbjct 421 RRLEIEEMALTKETDAASKERLEKLREELADDREKLRQLTARWQNEKNAIDSVREVKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLD--AALPQAQAREQVMLKEEVGPDDI 538 EALRGE ERAERDGDL K AELRYGRIPE+EK+L+ AA+ + VMLKEEVGPDD+ Sbjct 481 EALRGEEERAERDGDLGKVAELRYGRIPELEKQLEAAAAVSDGASDGAVMLKEEVGPDDV 540 Query 539 ADVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNR 598 ADVV+AWTGIPAGR++EGETAKLLRME EL KRV+GQ AV AVSDAVRR+RAGV+DPNR Sbjct 541 ADVVAAWTGIPAGRMMEGETAKLLRMETELAKRVVGQTEAVQAVSDAVRRARAGVADPNR 600 Query 599 PTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGY 658 PTG+F+FLGPTGVGKTELAK LADFLFDDERAMVRIDMSEY EKH+VARL+GAPPGYVGY Sbjct 601 PTGSFLFLGPTGVGKTELAKGLADFLFDDERAMVRIDMSEYSEKHSVARLVGAPPGYVGY 660 Query 659 EAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILIL 718 E+GGQLTEAVRRRPYTVVLFDE+EKAHPDVFD+LLQVLD+GRLTDG GRTVDFRNTILIL Sbjct 661 ESGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVLDDGRLTDGQGRTVDFRNTILIL 720 Query 719 TSNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQ 778 TSNLG+GG +QV+AAVR+ FKPEF+NRLDDV++F+ L+ E+L IVDIQL QL RLA Sbjct 721 TSNLGAGGDRDQVMAAVRSAFKPEFVNRLDDVVVFDPLSEEQLESIVDIQLDQLATRLAA 780 Query 779 RRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNV 838 RRL L+VS A+ WLA RG+DP+YGARPLRRL+QQAIGDQLAK+LLAG V DGDTVPV V Sbjct 781 RRLTLEVSDGARLWLAVRGYDPLYGARPLRRLIQQAIGDQLAKLLLAGTVRDGDTVPVTV 840 Query 839 SPDADSLILG 848 S D D L+LG Sbjct 841 SEDGDRLVLG 850 >gi|343927304|ref|ZP_08766780.1| chaperone ClpB [Gordonia alkanivorans NBRC 16433] gi|343762797|dbj|GAA13706.1| chaperone ClpB [Gordonia alkanivorans NBRC 16433] Length=850 Score = 1396 bits (3613), Expect = 0.0, Method: Compositional matrix adjust. Identities = 699/850 (83%), Positives = 779/850 (92%), Gaps = 2/850 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSF PTTKTQ AL+AA+QAA++AGNP++RPAH+L+ALL Q+DGIA+PLL+AVGV+P+ + Sbjct 1 MDSFTPTTKTQQALSAAVQAAASAGNPDVRPAHILVALLDQSDGIASPLLKAVGVDPSNI 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 RA+ Q L+DR+P AS PQLSRES+AA++ AQQLA EL DEYVSTEH++VGLATGDS Sbjct 61 RAQAQMLVDRMPTVAQASATPQLSRESIAAVSAAQQLAGELGDEYVSTEHIVVGLATGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DVAKLL GA+PQALR+AFV VRGS RVTS +PE+TYQAL+KYSTDLTA AREGKLDPV Sbjct 121 DVAKLLHNAGATPQALRDAFVAVRGSRRVTSEDPESTYQALEKYSTDLTAAAREGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRD EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQR+VAGDVPESLR+KT+++L Sbjct 181 IGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRVVAGDVPESLRNKTVISL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 D+GSMVAG+KYRGEFEERLKAVLD+IKNS GQIITFIDELHTIVGAGATG+ AMDAGNMI Sbjct 241 DMGSMVAGAKYRGEFEERLKAVLDEIKNSDGQIITFIDELHTIVGAGATGDSAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTL+EYRK+IEKDAALERRFQQVYVGEPSVED IGILRGLKDRYE+ Sbjct 301 KPMLARGELRLVGATTLEEYRKYIEKDAALERRFQQVYVGEPSVEDAIGILRGLKDRYEL 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAATLSDRYIT+RFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVER+V Sbjct 361 HHGVRITDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERIV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLE+EE+AL KE D AS ERL KLR+ELADQKEKL EL+ RWQ+EK AI+ VRDLKE+L Sbjct 421 RRLEVEEVALQKETDAASKERLEKLRAELADQKEKLNELSARWQSEKTAIDAVRDLKEEL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAR--EQVMLKEEVGPDDI 538 + LRGE+ERAERDGDL +AAELRYGRIP +EK+L+AAL + + VML+EEVGPDD+ Sbjct 481 DRLRGEAERAERDGDLGRAAELRYGRIPGLEKELEAALEKTGTDPGQDVMLQEEVGPDDV 540 Query 539 ADVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNR 598 A VVSAWTGIPAGR+LEGETAKLLRMEDELG+RVIGQKAAV AVSDAVRR+RAGV+DPNR Sbjct 541 AQVVSAWTGIPAGRMLEGETAKLLRMEDELGRRVIGQKAAVEAVSDAVRRARAGVADPNR 600 Query 599 PTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGY 658 P G+FMFLGPTGVGKTELAKALA+FLFDDERAMVRIDMSEYGEKH+VARL+GAPPGYVGY Sbjct 601 PLGSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYVGY 660 Query 659 EAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILIL 718 EAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTILIL Sbjct 661 EAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILIL 720 Query 719 TSNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQ 778 TSNLG+GG +QV+ AVR+ FKPEFINRLDDV+IF+ L+PEELV IVDIQL QL KRLAQ Sbjct 721 TSNLGAGGDKDQVMMAVRSAFKPEFINRLDDVVIFDALSPEELVSIVDIQLGQLKKRLAQ 780 Query 779 RRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNV 838 RRL L+VS AK WL RGFDP YGARPLRRLVQQ+IGDQLAK LL+G + DGD VPVNV Sbjct 781 RRLDLEVSPKAKEWLGARGFDPQYGARPLRRLVQQSIGDQLAKQLLSGDIRDGDVVPVNV 840 Query 839 SPDADSLILG 848 S D +SL+LG Sbjct 841 SADGESLVLG 850 >gi|262203952|ref|YP_003275160.1| ATP-dependent chaperone ClpB [Gordonia bronchialis DSM 43247] gi|262087299|gb|ACY23267.1| ATP-dependent chaperone ClpB [Gordonia bronchialis DSM 43247] Length=850 Score = 1391 bits (3600), Expect = 0.0, Method: Compositional matrix adjust. Identities = 704/850 (83%), Positives = 786/850 (93%), Gaps = 2/850 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSF PTTKTQ AL+AA+QAA++AGNP++RPAH+L+ALL Q+DGIA+PLL+AVGV+P+ V Sbjct 1 MDSFTPTTKTQQALSAAVQAAASAGNPDVRPAHILVALLDQSDGIASPLLKAVGVDPSNV 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 RA+ Q ++DR+P +GAS+ PQLSRES+AAI+ AQQLA ELDDEYVSTEH++VGLATGDS Sbjct 61 RAQAQAMVDRMPTVSGASSTPQLSRESIAAISAAQQLAGELDDEYVSTEHMVVGLATGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DVAKLL GA+PQALREAFV VRG+ARVTS +PE+TYQAL+KYSTDLTA AREGKLDPV Sbjct 121 DVAKLLHNAGATPQALREAFVAVRGNARVTSEDPESTYQALEKYSTDLTAAAREGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRD EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLR KT+++L Sbjct 181 IGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKTVISL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 D+GSMVAG+KYRGEFEERLKAVLD+IK SAGQ+ITFIDELHTIVGAGATG+ AMDAGNMI Sbjct 241 DMGSMVAGAKYRGEFEERLKAVLDEIKGSAGQVITFIDELHTIVGAGATGDSAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTL+EYRK+IEKDAALERRFQQVYVGEPSVED IGILRGLKDRYEV Sbjct 301 KPMLARGELRLVGATTLEEYRKYIEKDAALERRFQQVYVGEPSVEDAIGILRGLKDRYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAATLSDRYIT+RFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVER+V Sbjct 361 HHGVRITDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERIV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLE+EE+AL KE D AS ERL KLR ELADQKEKL EL+ RWQ+EK AI+ VRDLKE+L Sbjct 421 RRLEVEEVALQKETDAASKERLEKLRQELADQKEKLNELSARWQSEKTAIDAVRDLKEEL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAR--EQVMLKEEVGPDDI 538 E LRGE++RAERDGDL +AAELRYG+IP +EK L+AA+ + + VML+EEVGPDD+ Sbjct 481 ERLRGEADRAERDGDLGRAAELRYGKIPGLEKNLEAAIEKTGTDPGQDVMLQEEVGPDDV 540 Query 539 ADVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNR 598 A VVS+WTGIPAGR+LEGETAKLLRME+ELG RVIGQKAAV AVSDAVRR+RAGV+DPNR Sbjct 541 AQVVSSWTGIPAGRMLEGETAKLLRMEEELGHRVIGQKAAVVAVSDAVRRARAGVADPNR 600 Query 599 PTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGY 658 P G+FMFLGPTGVGKTELAKALA+FLFDDERAMVRIDMSEYGEKH+VARL+GAPPGYVGY Sbjct 601 PLGSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYVGY 660 Query 659 EAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILIL 718 EAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTIL+L Sbjct 661 EAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILVL 720 Query 719 TSNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQ 778 TSNLG+GG +QV+AAVR+ FKPEFINRLDDV+IF+ L+PEELV IVDIQLAQLGKRLAQ Sbjct 721 TSNLGAGGDKDQVMAAVRSRFKPEFINRLDDVIIFDALSPEELVSIVDIQLAQLGKRLAQ 780 Query 779 RRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNV 838 RRL+LQV+ AK WLA+RGFDP+YGARPLRRLVQQAIGD LAK LLAG + DGD VPVNV Sbjct 781 RRLELQVTPKAKEWLAERGFDPLYGARPLRRLVQQAIGDSLAKALLAGDIRDGDVVPVNV 840 Query 839 SPDADSLILG 848 S D +SL+LG Sbjct 841 SADGESLVLG 850 >gi|333921729|ref|YP_004495310.1| chaperone protein ClpB [Amycolicicoccus subflavus DQS3-9A1] gi|333483950|gb|AEF42510.1| Chaperone protein ClpB [Amycolicicoccus subflavus DQS3-9A1] Length=851 Score = 1384 bits (3583), Expect = 0.0, Method: Compositional matrix adjust. Identities = 684/851 (81%), Positives = 766/851 (91%), Gaps = 3/851 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 ++SF+PTTK QAAL+ A+QAAS AGNP+IRP HLL ALL Q DG+AAPLL+AV +P +V Sbjct 1 MESFSPTTKVQAALSTAMQAASAAGNPDIRPVHLLAALLDQADGVAAPLLKAVSADPGSV 60 Query 61 RAETQRLLDRLPQATGAST-QPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGD 119 RAET L DRLP TG+S PQL+RE+L AIT AQ+LATELDDEYVS EHV+VGLA GD Sbjct 61 RAETAALADRLPVVTGSSVATPQLNREALGAITAAQKLATELDDEYVSAEHVLVGLAEGD 120 Query 120 SDVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDP 179 DVA+LL HGA+PQALR+AF VRG++RVTSP+PE TYQAL+KYSTDLT +AREGKLDP Sbjct 121 GDVARLLQRHGATPQALRDAFTAVRGNSRVTSPDPEGTYQALEKYSTDLTKQAREGKLDP 180 Query 180 VIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVA 239 VIGRDNEIRRV+QVLSRRTKNNPVLIGEPGVGKTAIVEGLAQR+VAGDVPESLR KT++ Sbjct 181 VIGRDNEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRVVAGDVPESLRGKTVIV 240 Query 240 LDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNM 299 LDLGSMVAG+KYRGEFEERLKAVLD+IK SAGQI+TFIDE+HTIVGAGATGE AMDAGNM Sbjct 241 LDLGSMVAGAKYRGEFEERLKAVLDEIKKSAGQIVTFIDEMHTIVGAGATGESAMDAGNM 300 Query 300 IKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYE 359 IKPMLARGELR+VGATTLDEYRK+IEKDAALERRFQQV VGEPSVEDT+GILRGLK+RYE Sbjct 301 IKPMLARGELRMVGATTLDEYRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKERYE 360 Query 360 VHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERL 419 VHHGVRITDS+LVAAATLSDRYIT+RFLPDKAIDLVDEAASRLRMEIDSRPVE+DE+ER Sbjct 361 VHHGVRITDSSLVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPVEVDEIERA 420 Query 420 VRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQ 479 VRRLEIEEMAL+KE DE S +RL KLR ELAD +E+L+ELT RWQNEK +IE VR++KEQ Sbjct 421 VRRLEIEEMALTKETDEGSKDRLEKLRKELADARERLSELTARWQNEKKSIESVREIKEQ 480 Query 480 LEALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQARE--QVMLKEEVGPDD 537 LE LRGESERAERDGDL KAAELRYGRIPE+EK+L+AA + + +VMLKEEVGPDD Sbjct 481 LENLRGESERAERDGDLGKAAELRYGRIPELEKQLEAAEAASHGGDSGEVMLKEEVGPDD 540 Query 538 IADVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPN 597 +ADVVSAWTGIPAGRL+EGETAKLLRMEDEL RV+GQ AV AVSDAVRR+RAGV+DP+ Sbjct 541 VADVVSAWTGIPAGRLMEGETAKLLRMEDELRHRVVGQDNAVQAVSDAVRRARAGVADPD 600 Query 598 RPTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVG 657 RPTG+FMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEY EKH VARL+GAPPGYVG Sbjct 601 RPTGSFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYSEKHAVARLVGAPPGYVG 660 Query 658 YEAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILI 717 YEAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFD+LLQVLD+GRLTDG GRTVDFRN ILI Sbjct 661 YEAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDILLQVLDDGRLTDGQGRTVDFRNAILI 720 Query 718 LTSNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLA 777 LTSNLGSGGS E V+AAVR+ FKPEF+NRLDD++IF L ++L IV+IQL L RLA Sbjct 721 LTSNLGSGGSDEMVMAAVRSAFKPEFVNRLDDIVIFRSLAQDQLEAIVEIQLRLLRHRLA 780 Query 778 QRRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVN 837 RRL L VS A+ WLA+RG+DPVYGARPLRRL+QQ+IGDQLAK++L+G +HDGDTVPVN Sbjct 781 GRRLDLAVSERAREWLARRGYDPVYGARPLRRLIQQSIGDQLAKLILSGVIHDGDTVPVN 840 Query 838 VSPDADSLILG 848 VS D +SL+LG Sbjct 841 VSVDGESLVLG 851 >gi|296138231|ref|YP_003645474.1| ATP-dependent chaperone ClpB [Tsukamurella paurometabola DSM 20162] gi|296026365|gb|ADG77135.1| ATP-dependent chaperone ClpB [Tsukamurella paurometabola DSM 20162] Length=846 Score = 1382 bits (3578), Expect = 0.0, Method: Compositional matrix adjust. Identities = 690/849 (82%), Positives = 766/849 (91%), Gaps = 6/849 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTKTQAALT+ALQAAS AGNPEI PAHLL+ALL Q DGIAAPLL+AVGV+P TV Sbjct 1 MDSFNPTTKTQAALTSALQAASAAGNPEISPAHLLVALLDQTDGIAAPLLKAVGVDPVTV 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 R Q L+DR P+A+G++TQPQLSRESLA+IT AQ+LATE+ D+YVSTEHV+ GL S Sbjct 61 RNRAQELVDRKPKASGSTTQPQLSRESLASITAAQKLATEMGDQYVSTEHVLYGL----S 116 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 + A++L GA+PQA++EAF VRGSA+VTS +PE YQAL+KYSTDLTARAREGKLDPV Sbjct 117 EAAQVLGNAGATPQAIQEAFTAVRGSAKVTSQDPEGQYQALEKYSTDLTARAREGKLDPV 176 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQR+V GDVPESLR KT+++L Sbjct 177 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRVVTGDVPESLRGKTVISL 236 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAG+KYRGEFEERLKAVLD+IK S+GQIITFIDELHTIVGAGATG+ AMDAGNMI Sbjct 237 DLGSMVAGAKYRGEFEERLKAVLDEIKASSGQIITFIDELHTIVGAGATGDSAMDAGNMI 296 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTLDEYR++IEKDAALERRFQQV VGEPSVEDTIGILRGLK+RYEV Sbjct 297 KPMLARGELRLVGATTLDEYRQYIEKDAALERRFQQVLVGEPSVEDTIGILRGLKERYEV 356 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALV+AA+LSDRYIT+RFLPDKAIDLVDEAASRLRMEIDSRP EID ER+V Sbjct 357 HHGVRITDSALVSAASLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPEEIDAEERIV 416 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMALSKE D AS +RL KLR ELAD KEKLA+LT+RWQNEK AI+ VR LKEQL Sbjct 417 RRLEIEEMALSKETDAASVDRLEKLRGELADHKEKLAQLTSRWQNEKGAIDSVRTLKEQL 476 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQARE--QVMLKEEVGPDDI 538 E L+GES+RAERDGDL +AAELRYG+IP +EK+LD A+ + A +VMLKEEVGPDD+ Sbjct 477 ENLKGESDRAERDGDLGRAAELRYGQIPALEKELDEAVAASGAASDGEVMLKEEVGPDDV 536 Query 539 ADVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNR 598 ADVVS+WTGIPAGR+LEGETAKLLRME E+GKRVIGQ+AAV AVSDAVRR+RAGV+DPNR Sbjct 537 ADVVSSWTGIPAGRMLEGETAKLLRMESEIGKRVIGQEAAVEAVSDAVRRTRAGVADPNR 596 Query 599 PTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGY 658 PTG+F+FLGPTGVGKTELAK LA+FLFDDERAMVRIDMSEYGEKH+VARL+GAPPGYVGY Sbjct 597 PTGSFLFLGPTGVGKTELAKGLAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYVGY 656 Query 659 EAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILIL 718 EAGGQLTEAVRRRPYTVVLFDE+EKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTILIL Sbjct 657 EAGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILIL 716 Query 719 TSNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQ 778 TSNLG+GG + V+ AVRA FKPEFINRLDDVLIF+ L+ +L IVDIQL QL KRL+Q Sbjct 717 TSNLGAGGDKDHVMNAVRAKFKPEFINRLDDVLIFDSLDSGQLTGIVDIQLDQLRKRLSQ 776 Query 779 RRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNV 838 RRL LQVS AK WLA+RGFDP+YGARPLRRLVQQ+IGDQLAK LLAG V DGD V V V Sbjct 777 RRLDLQVSDEAKGWLAERGFDPLYGARPLRRLVQQSIGDQLAKALLAGDVRDGDPVKVTV 836 Query 839 SPDADSLIL 847 S D D LI+ Sbjct 837 SEDGDRLII 845 >gi|226304880|ref|YP_002764838.1| chaperone ClpB [Rhodococcus erythropolis PR4] gi|226183995|dbj|BAH32099.1| chaperone ClpB [Rhodococcus erythropolis PR4] Length=850 Score = 1376 bits (3561), Expect = 0.0, Method: Compositional matrix adjust. Identities = 698/849 (83%), Positives = 767/849 (91%), Gaps = 2/849 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSF PTTKTQAA+TAALQ+AS+AGNP+IRPAHLL+ALL Q DGIAAPLL+AVGV+P V Sbjct 1 MDSFTPTTKTQAAMTAALQSASSAGNPDIRPAHLLVALLDQTDGIAAPLLKAVGVDPTVV 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 E Q ++DRLP+ TGAS+ PQL RE+LAA+T AQ LATE+DDEYVSTEHV+ GLA GDS Sbjct 61 HREAQAIVDRLPKTTGASSTPQLGREALAALTAAQHLATEMDDEYVSTEHVLYGLAGGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DVA+LL HGA+ ALREAF VRGSARVTSPEPE TYQAL+KYSTDLT AR GKLDPV Sbjct 121 DVAQLLVRHGATQDALREAFTTVRGSARVTSPEPEGTYQALEKYSTDLTEAARSGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRD EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLR KT+V+L Sbjct 181 IGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKTVVSL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAG+K+RGEFEERLKAVLDDIKNSAGQ+ITFIDELHTIVGAGATGE AMDAGNMI Sbjct 241 DLGSMVAGAKFRGEFEERLKAVLDDIKNSAGQVITFIDELHTIVGAGATGESAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTL+EYRK+IEKDAALERRFQQV VGEPSVEDTIGILRGLK+RYEV Sbjct 301 KPMLARGELRLVGATTLEEYRKYIEKDAALERRFQQVLVGEPSVEDTIGILRGLKERYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAA LSDRYIT+RFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVER V Sbjct 361 HHGVRITDSALVAAAALSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERTV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEE+AL KE D+AS RL KLR ELAD +EKL +L+TRWQNEK AI+ VR LKEQL Sbjct 421 RRLEIEEVALEKETDDASKARLEKLRQELADDREKLNQLSTRWQNEKQAIDSVRVLKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKL-DAALPQAQARE-QVMLKEEVGPDDI 538 E LRGESERAERDGDL KAAELRYGRIP +EK+L +AA+ A + VMLKEEVGPDD+ Sbjct 481 ETLRGESERAERDGDLGKAAELRYGRIPALEKELEEAAVASGAASDGDVMLKEEVGPDDV 540 Query 539 ADVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNR 598 ADVV+AWTGIPAGR++EGET KLLRME ELGKRV+GQ AV AVSDAVRR+RAGV+DPNR Sbjct 541 ADVVAAWTGIPAGRMMEGETEKLLRMESELGKRVVGQTDAVVAVSDAVRRARAGVADPNR 600 Query 599 PTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGY 658 PTG+F+FLGPTGVGKTELAKALADFLFDDERAM+RIDMSEYGEKH+VARL+GAPPGYVGY Sbjct 601 PTGSFLFLGPTGVGKTELAKALADFLFDDERAMIRIDMSEYGEKHSVARLVGAPPGYVGY 660 Query 659 EAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILIL 718 EAGGQLTEAVRRRPY+VVLFDE+EKAHPDVFDVLL VLDEGRLTDG GRTVDFRNTILIL Sbjct 661 EAGGQLTEAVRRRPYSVVLFDEVEKAHPDVFDVLLAVLDEGRLTDGQGRTVDFRNTILIL 720 Query 719 TSNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQ 778 TSNLGSGG+ EQV+ AVR FKPEFINRLDDV++F+ L+ E+L IVDIQL QL KRLA Sbjct 721 TSNLGSGGTREQVMDAVRHAFKPEFINRLDDVVVFDSLSEEQLEHIVDIQLEQLQKRLAA 780 Query 779 RRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNV 838 RRL L+V+ A+ WLA RG+DP+YGARPLRRLVQQ+IGDQLAK+LLAG+V DGDTV V V Sbjct 781 RRLTLEVNGAARMWLAVRGYDPLYGARPLRRLVQQSIGDQLAKLLLAGKVQDGDTVHVGV 840 Query 839 SPDADSLIL 847 S DAD L+L Sbjct 841 SEDADQLVL 849 >gi|326384837|ref|ZP_08206513.1| ATP-dependent chaperone ClpB [Gordonia neofelifaecis NRRL B-59395] gi|326196499|gb|EGD53697.1| ATP-dependent chaperone ClpB [Gordonia neofelifaecis NRRL B-59395] Length=850 Score = 1375 bits (3559), Expect = 0.0, Method: Compositional matrix adjust. Identities = 686/850 (81%), Positives = 777/850 (92%), Gaps = 2/850 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSF PTTKTQAAL AA+Q A+ AGNP++RPAH+L+ALL Q DGIA+PLL+AVGV+P + Sbjct 1 MDSFTPTTKTQAALQAAVQDAAAAGNPDVRPAHILVALLEQTDGIASPLLKAVGVDPVRI 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 R E + L+DR P + +S QPQLSRES+AAIT AQ+LATEL DEYVSTEH+MVGLATG+S Sbjct 61 RNEAKNLVDRAPTVSSSSAQPQLSRESIAAITAAQKLATELTDEYVSTEHLMVGLATGES 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 D AKLLTG GA+P+ALR+AFV VRG+ARVTS +PE+TYQ+L+KYSTDLT RAREG+LDPV Sbjct 121 DTAKLLTGAGATPEALRDAFVAVRGTARVTSEDPESTYQSLEKYSTDLTKRAREGELDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRD+EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQR+VAGDVPESLR KT+++L Sbjct 181 IGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRVVAGDVPESLRGKTVISL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAG+KYRGEFEERLKAVLD+IK S GQIITFIDELHTIVGAGATGE AMDAGNMI Sbjct 241 DLGSMVAGAKYRGEFEERLKAVLDEIKASEGQIITFIDELHTIVGAGATGESAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTL+EYRK+IEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV Sbjct 301 KPMLARGELRLVGATTLEEYRKYIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALV+AATLSDRYIT+RFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVER+V Sbjct 361 HHGVRITDSALVSAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERIV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLE+EE+AL KE D AS ERL LR ELAD +EKL EL+ RWQ+EK AI+ VRD+KE+L Sbjct 421 RRLEVEEVALEKETDAASKERLEALRRELADHREKLNELSARWQSEKTAIDAVRDVKEEL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQA--QAREQVMLKEEVGPDDI 538 E LRGE++RAERDGDL KAAELRYG+IP +EK+L+AA+ ++ E VML+EEVGPD + Sbjct 481 ERLRGEADRAERDGDLGKAAELRYGKIPGLEKELEAAVEKSGTDPDEDVMLQEEVGPDQV 540 Query 539 ADVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNR 598 A+VVSAWTG+PAG++LEGETAKLLRMEDELGKRVIGQ AV AVSDAVRR+RAGV+DPNR Sbjct 541 AEVVSAWTGVPAGKMLEGETAKLLRMEDELGKRVIGQLDAVKAVSDAVRRARAGVADPNR 600 Query 599 PTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGY 658 P G+F+FLGPTG GKTELAKALA+F+FDDERA+VRIDMSEYGEKH+VARL+GAPPGYVGY Sbjct 601 PLGSFLFLGPTGTGKTELAKALAEFMFDDERAIVRIDMSEYGEKHSVARLVGAPPGYVGY 660 Query 659 EAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILIL 718 EAGGQLTEAVRRRPY+VVLFDE+EKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTILIL Sbjct 661 EAGGQLTEAVRRRPYSVVLFDEVEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILIL 720 Query 719 TSNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQ 778 TSNLG+GG +QV+AAVRA FKPEFINRLDDV+IF+ L+PE+LVRIVDIQ+ L KRL Q Sbjct 721 TSNLGAGGDNDQVMAAVRAAFKPEFINRLDDVVIFDALSPEQLVRIVDIQIDGLAKRLRQ 780 Query 779 RRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNV 838 RRL+L V+ AK WLA+RGFDP+YGARPLRRLVQQAIGDQLAK LLAG V DGDTVPV+V Sbjct 781 RRLELDVTPKAKEWLAERGFDPLYGARPLRRLVQQAIGDQLAKALLAGDVRDGDTVPVDV 840 Query 839 SPDADSLILG 848 S D ++L++G Sbjct 841 SGDGETLLVG 850 >gi|229492957|ref|ZP_04386752.1| ATP-dependent chaperone protein ClpB [Rhodococcus erythropolis SK121] gi|229319987|gb|EEN85813.1| ATP-dependent chaperone protein ClpB [Rhodococcus erythropolis SK121] Length=850 Score = 1364 bits (3531), Expect = 0.0, Method: Compositional matrix adjust. Identities = 698/849 (83%), Positives = 764/849 (90%), Gaps = 2/849 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSF PTTKTQAA+TAALQ+AS+AGNP+IRPAHLL+ALL Q DGIAAPLL+AVGV+P V Sbjct 1 MDSFTPTTKTQAAMTAALQSASSAGNPDIRPAHLLVALLDQTDGIAAPLLKAVGVDPTVV 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 E Q ++DRLP+ TGAS+ PQL RE+LAA+T AQ LATE+DDEYVSTEHV+ GLA GDS Sbjct 61 HREAQAIVDRLPKTTGASSTPQLGREALAALTAAQHLATEMDDEYVSTEHVLYGLAGGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DVA+LL HGA+ ALREAF VRGSARVTSPEPE TYQAL+KYSTDLT AR GKLDPV Sbjct 121 DVAQLLVRHGATQDALREAFTTVRGSARVTSPEPEGTYQALEKYSTDLTEAARSGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRD EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLR KT+V+L Sbjct 181 IGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKTVVSL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAG+K+RGEFEERLKAVLDDIKNSAGQ+ITFIDELHTIVGAGATGE AMDAGNMI Sbjct 241 DLGSMVAGAKFRGEFEERLKAVLDDIKNSAGQVITFIDELHTIVGAGATGESAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTL+EYRK+IEKDAALERRFQQV VGEPSVEDTIGILRGLK+RYEV Sbjct 301 KPMLARGELRLVGATTLEEYRKYIEKDAALERRFQQVLVGEPSVEDTIGILRGLKERYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAA LSDRYIT+RFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVER+V Sbjct 361 HHGVRITDSALVAAAALSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERMV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEE+AL KE D+AS RL KLR ELAD +EKL +L+TRWQNEK AI+ VR LKEQL Sbjct 421 RRLEIEEVALEKETDDASKARLEKLRQELADDREKLNQLSTRWQNEKQAIDSVRVLKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIP--EVEKKLDAALPQAQAREQVMLKEEVGPDDI 538 E LRGESERAERDGDL KAAELRYGRIP E E + AA A + VMLKEEVGPDD+ Sbjct 481 ETLRGESERAERDGDLGKAAELRYGRIPALEKELEEAAAASGAASDGDVMLKEEVGPDDV 540 Query 539 ADVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNR 598 ADVV+AWTGIPAGR++EGET KLLRME ELGKRV+GQ AV AVSDAVRR+RAGV+DPNR Sbjct 541 ADVVAAWTGIPAGRMMEGETEKLLRMESELGKRVVGQTDAVVAVSDAVRRARAGVADPNR 600 Query 599 PTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGY 658 PTG+F+FLGPTGVGKTELAKALADFLFDDERAM+RIDMSEYGEKH+VARL+GAPPGYVGY Sbjct 601 PTGSFLFLGPTGVGKTELAKALADFLFDDERAMIRIDMSEYGEKHSVARLVGAPPGYVGY 660 Query 659 EAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILIL 718 EAGGQLTEAVRRRPY+VVLFDE+EKAHPDVFDVLL VLDEGRLTDG GRTVDFRNTILIL Sbjct 661 EAGGQLTEAVRRRPYSVVLFDEVEKAHPDVFDVLLAVLDEGRLTDGQGRTVDFRNTILIL 720 Query 719 TSNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQ 778 TSNLGSGG+ EQV+ AVR FKPEFINRLDDV+IF+ L+ E+L IVDIQL QL KRLA Sbjct 721 TSNLGSGGTREQVMDAVRHAFKPEFINRLDDVVIFDSLSEEQLEHIVDIQLEQLQKRLAA 780 Query 779 RRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNV 838 RRL L+V+ A+ WLA RG+DP+YGARPLRRLVQQ+IGDQLAK+LLAG+V DGDTV V V Sbjct 781 RRLTLEVNGAARMWLAVRGYDPLYGARPLRRLVQQSIGDQLAKLLLAGKVQDGDTVHVGV 840 Query 839 SPDADSLIL 847 S DAD L+L Sbjct 841 SEDADQLVL 849 >gi|54027376|ref|YP_121618.1| putative Clp protease ATP-binding subunit [Nocardia farcinica IFM 10152] gi|54018884|dbj|BAD60254.1| putative Clp protease ATP-binding subunit [Nocardia farcinica IFM 10152] Length=853 Score = 1349 bits (3491), Expect = 0.0, Method: Compositional matrix adjust. Identities = 705/849 (84%), Positives = 766/849 (91%), Gaps = 2/849 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTKTQAALTAALQAAS AGNPEIRPAHLL+ALL Q DGIAAPLL+AVGV+PATV Sbjct 1 MDSFNPTTKTQAALTAALQAASAAGNPEIRPAHLLVALLDQTDGIAAPLLKAVGVDPATV 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 R E Q L+DRLP+ATGA+TQPQL RE+LAAIT AQ+LATEL DEYVSTEHV+VGLA GDS Sbjct 61 RREAQDLVDRLPRATGATTQPQLGREALAAITAAQRLATELGDEYVSTEHVLVGLADGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DV LL +GA+ ALREAF VRGSARVT+P+PEATYQAL+KYSTDLT AR GKLDPV Sbjct 121 DVTMLLKKYGATADALREAFTTVRGSARVTTPDPEATYQALEKYSTDLTEAARTGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRD EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLR K +++L Sbjct 181 IGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKKVISL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLG+MVAG+KYRGEFEERLKAVL+DIKNSAGQIITFIDELHTIVGAGATGE AMDAGNMI Sbjct 241 DLGAMVAGAKYRGEFEERLKAVLEDIKNSAGQIITFIDELHTIVGAGATGESAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTL+EYR+HIEKDAALERRFQQV VGEPSVEDT+GILRG+K+RYEV Sbjct 301 KPMLARGELRLVGATTLEEYRQHIEKDAALERRFQQVLVGEPSVEDTVGILRGIKERYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAA LSDRYIT+RFLPDKAIDLVDE+ASRLRMEIDSRPVEIDEVER V Sbjct 361 HHGVRITDSALVAAAALSDRYITSRFLPDKAIDLVDESASRLRMEIDSRPVEIDEVERAV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEE+ALSKE DEAS RL KLR ELAD +EKL +L TRWQNEK+AI+ VR LKEQL Sbjct 421 RRLEIEEVALSKETDEASKLRLEKLRQELADDREKLNQLMTRWQNEKSAIDQVRTLKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAA--LPQAQAREQVMLKEEVGPDDI 538 EALRGESERAERDGDL KAAELRYGRIP +EK+L A A A +VMLKEEVGPDDI Sbjct 481 EALRGESERAERDGDLGKAAELRYGRIPSLEKQLAEAEKASGAAADGEVMLKEEVGPDDI 540 Query 539 ADVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNR 598 A+VVS+WTGIP GRLLEGET KLLRMEDELG+RV+GQK AV AVSDAVRR+RAGV+DPNR Sbjct 541 AEVVSSWTGIPVGRLLEGETQKLLRMEDELGRRVVGQKEAVQAVSDAVRRARAGVADPNR 600 Query 599 PTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGY 658 PTG+FMF+GPTGVGKTELAKALADFLFDDERAMVRIDMSEY EKH VARL+GAPPGYVGY Sbjct 601 PTGSFMFVGPTGVGKTELAKALADFLFDDERAMVRIDMSEYSEKHAVARLVGAPPGYVGY 660 Query 659 EAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILIL 718 + GGQLTEAVRRRPYTVVLFDEIEKAHPDVFD+LLQVLDEGRLTDG GRTVDFRNTILIL Sbjct 661 DQGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDILLQVLDEGRLTDGQGRTVDFRNTILIL 720 Query 719 TSNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQ 778 TSNLG+GG E V+ AVRA FKPEF+NRLDDV++F L+ E+L IVDIQL QL KRLAQ Sbjct 721 TSNLGAGGDQEFVMNAVRAAFKPEFLNRLDDVVMFHALDEEQLEHIVDIQLEQLQKRLAQ 780 Query 779 RRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNV 838 RRL L V+ A+ WLA RG+DPVYGARPLRRL+QQAIGD LAK LLAG V DGDTV V V Sbjct 781 RRLTLDVTGSARFWLAVRGYDPVYGARPLRRLIQQAIGDTLAKELLAGTVTDGDTVKVGV 840 Query 839 SPDADSLIL 847 SPD D+L++ Sbjct 841 SPDGDNLVV 849 >gi|289568297|ref|ZP_06448524.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium tuberculosis T17] gi|289542050|gb|EFD45699.1| endopeptidase subunit ATP binding protein B clpB [Mycobacterium tuberculosis T17] Length=716 Score = 1323 bits (3423), Expect = 0.0, Method: Compositional matrix adjust. Identities = 669/670 (99%), Positives = 670/670 (100%), Gaps = 0/670 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV Sbjct 1 MDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 Query 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS Sbjct 61 RAETQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDS 120 Query 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV Sbjct 121 DVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPV 180 Query 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL Sbjct 181 IGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL 240 Query 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI Sbjct 241 DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMI 300 Query 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV Sbjct 301 KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEV 360 Query 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV Sbjct 361 HHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLV 420 Query 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL Sbjct 421 RRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL 480 Query 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD Sbjct 481 EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIAD 540 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT Sbjct 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA Sbjct 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 Query 661 GGQLTEAVRR 670 GGQLTEAVRR Sbjct 661 GGQLTEAVRR 670 >gi|317507295|ref|ZP_07965037.1| ATP-dependent chaperone ClpB [Segniliparus rugosus ATCC BAA-974] gi|316254398|gb|EFV13726.1| ATP-dependent chaperone ClpB [Segniliparus rugosus ATCC BAA-974] Length=849 Score = 1308 bits (3384), Expect = 0.0, Method: Compositional matrix adjust. Identities = 659/845 (78%), Positives = 749/845 (89%), Gaps = 0/845 (0%) Query 4 FNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATVRAE 63 F PTT+ QAA+++ALQA + AG PE+RP LL+ALL Q+DGIA PLL+A G +P V A Sbjct 3 FQPTTRAQAAISSALQAVTAAGRPEVRPEDLLLALLEQSDGIAVPLLQASGADPKAVTAA 62 Query 64 TQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDSDVA 123 + + LP G ++ P+LSRE +A+ TA +LA EL DEYVSTEH++VGLATGDS A Sbjct 63 VRAAVAALPTVQGGASAPRLSRELASALETASKLAAELRDEYVSTEHLIVGLATGDSPAA 122 Query 124 KLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPVIGR 183 +LL HGA+P ALREAF VRGSAR+T+ +PE +YQAL+KYSTDLTA AR GKLDPVIGR Sbjct 123 RLLAEHGATPAALREAFTAVRGSARITTEDPEGSYQALEKYSTDLTALARAGKLDPVIGR 182 Query 184 DNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVALDLG 243 D EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLR KT+V+LDLG Sbjct 183 DTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKTLVSLDLG 242 Query 244 SMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMIKPM 303 SMVAG+KYRGEFEERLKAVL++IK S GQ+ITF+DELHTIVGAGATGE AMDAGNMIKP+ Sbjct 243 SMVAGAKYRGEFEERLKAVLEEIKASEGQVITFVDELHTIVGAGATGESAMDAGNMIKPL 302 Query 304 LARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEVHHG 363 LARGELRLVGATTLDEYR++IEKDAALERRFQQV VGEPSVEDT+GILRGLK+RYEVHHG Sbjct 303 LARGELRLVGATTLDEYRQYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKERYEVHHG 362 Query 364 VRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLVRRL 423 VRITDSALVAAATLSDRYIT+RFLPDKAIDLVDEAASRLRMEIDSRPVE+DEVER+VRRL Sbjct 363 VRITDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPVEVDEVERVVRRL 422 Query 424 EIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQLEAL 483 E+EE+AL+KE DEAS RLAKLR ELADQ+E+LAELT RWQ EK AI+ VRD+KEQLEAL Sbjct 423 EVEEVALAKETDEASIARLAKLRGELADQRERLAELTARWQREKQAIDSVRDVKEQLEAL 482 Query 484 RGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIADVVS 543 RGE++RAERDGDL KAAELRYGRIPE E++L + +QVMLKEEVGPDDIA+VVS Sbjct 483 RGEADRAERDGDLGKAAELRYGRIPEAERELARLTEASGGDQQVMLKEEVGPDDIAEVVS 542 Query 544 AWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPTGAF 603 AWTG+PAGR++EGETAKLLRME+ELGKRV+ QK A+ AVSDAVRR+RAGV+DPNRPTG+F Sbjct 543 AWTGVPAGRMMEGETAKLLRMEEELGKRVVSQKKAIRAVSDAVRRARAGVADPNRPTGSF 602 Query 604 MFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEAGGQ 663 +FLGPTGVGKTELAKALA+FLFDDERA++RIDMSEY EKH+VARL+GAPPGYVGY+ GGQ Sbjct 603 LFLGPTGVGKTELAKALAEFLFDDERAIIRIDMSEYAEKHSVARLMGAPPGYVGYDQGGQ 662 Query 664 LTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTSNLG 723 LTEAVRRRPY++VLFDE+EKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTILILTSNLG Sbjct 663 LTEAVRRRPYSIVLFDEVEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTSNLG 722 Query 724 SGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRRLQL 783 +GGS E+ + AVR FKPEFINRLDD++IF+GLNPEELV IVDIQL QL +RL QRRL L Sbjct 723 AGGSEEETMLAVRMAFKPEFINRLDDIVIFDGLNPEELVGIVDIQLRQLQQRLGQRRLSL 782 Query 784 QVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSPDAD 843 +V+ AK WLA RGFDPVYGARPLRRL+Q AIGD+LAK+LLAG V DGD V V+V D D Sbjct 783 EVTDKAKHWLASRGFDPVYGARPLRRLIQHAIGDELAKLLLAGSVRDGDEVTVDVGEDPD 842 Query 844 SLILG 848 L++G Sbjct 843 KLVIG 847 >gi|325002495|ref|ZP_08123607.1| ATP-dependent chaperone ClpB [Pseudonocardia sp. P1] Length=873 Score = 1307 bits (3382), Expect = 0.0, Method: Compositional matrix adjust. Identities = 651/853 (77%), Positives = 741/853 (87%), Gaps = 11/853 (1%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +DSFNPTT+TQ A++AA+QAA+ AGNP++ P HLL ALL Q DGIAAPLLEAVG + V Sbjct 1 MDSFNPTTRTQQAISAAVQAATLAGNPDVGPTHLLGALLAQGDGIAAPLLEAVGADAGAV 60 Query 61 RAETQRLLDRLPQATGAS-TQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGD 119 R + L +RLP A+G+S + PQLSR++LAAIT AQQLATE+ DEYVSTEH++VGLA Sbjct 61 RKDVTALGNRLPSASGSSVSAPQLSRDALAAITAAQQLATEMGDEYVSTEHLLVGLAQSG 120 Query 120 SDVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDP 179 VA+LL +GA+P ALREAF +VRGSARV+SP+PE++YQAL+KY DLTARAR+G LDP Sbjct 121 GPVAQLLQRYGATPDALREAFGRVRGSARVSSPDPESSYQALEKYGQDLTARARDGGLDP 180 Query 180 VIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVA 239 VIGRD EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIV GDVPESLR K +VA Sbjct 181 VIGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVDGDVPESLRGKRVVA 240 Query 240 LDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNM 299 LDLGSMVAG+KYRGEFEERLKAVL +I +SAG+IITFIDELHTIVGAGA+GEGAMDAGNM Sbjct 241 LDLGSMVAGAKYRGEFEERLKAVLKEITDSAGEIITFIDELHTIVGAGASGEGAMDAGNM 300 Query 300 IKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYE 359 IKPMLARGELR+VGATTLDEYR+HIEKDAALERRFQQV VGEPSVEDTIGILRGLK+RYE Sbjct 301 IKPMLARGELRMVGATTLDEYRQHIEKDAALERRFQQVLVGEPSVEDTIGILRGLKERYE 360 Query 360 VHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERL 419 VHHGVRITD+ALVAA+TLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEID VER Sbjct 361 VHHGVRITDAALVAASTLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDTVERA 420 Query 420 VRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQ 479 VRRLEIEEMAL KE D ASA+RL LR+ELA+++E+L LT RWQNE+ AIE R+LKEQ Sbjct 421 VRRLEIEEMALEKESDAASADRLVALRAELAEKREELTALTARWQNERGAIESTRELKEQ 480 Query 480 LEALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIA 539 LE LRGES+RAERDGDL +AAELRYGRIP++EK+L + E VMLKEEVGPDD+A Sbjct 481 LEQLRGESDRAERDGDLGRAAELRYGRIPQLEKELAEKTAVVETHEDVMLKEEVGPDDVA 540 Query 540 DVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRP 599 DVVS+WTG+PAGR+LEGETAKLLRMEDELG+RVIGQ AV VSDAVRR+RAG++D NRP Sbjct 541 DVVSSWTGVPAGRMLEGETAKLLRMEDELGRRVIGQAEAVRVVSDAVRRARAGIADENRP 600 Query 600 TGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYE 659 TG+F+FLGPTGVGKTELAKALA+FLFDDERAMVR+DMSEY EKH+VARL+GAPPGYVGY+ Sbjct 601 TGSFLFLGPTGVGKTELAKALAEFLFDDERAMVRVDMSEYSEKHSVARLVGAPPGYVGYD 660 Query 660 AGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILT 719 GGQLTEAVRRRPYTVVL DE+EKAHPDVFD LLQVLD+GRLTDG GRTVDFRNTIL+LT Sbjct 661 QGGQLTEAVRRRPYTVVLLDEVEKAHPDVFDTLLQVLDDGRLTDGQGRTVDFRNTILVLT 720 Query 720 SNLGSGGSAEQ----------VLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQL 769 SNLGS A+Q V+A VR FKPEF+NRLDDV++F L+ +EL IVDIQ+ Sbjct 721 SNLGSQAIADQALDEKAREDAVMAVVRTHFKPEFLNRLDDVVVFHALSTDELTHIVDIQV 780 Query 770 AQLGKRLAQRRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVH 829 LG RLA+RRL L+VS A+ WLA GFDPV+GARPLRRLVQ +IGDQLA+ LL+G V Sbjct 781 GVLGDRLAKRRLTLEVSDAAREWLAMNGFDPVFGARPLRRLVQSSIGDQLARELLSGSVR 840 Query 830 DGDTVPVNVSPDA 842 +GDTV V++ P A Sbjct 841 EGDTVRVDLDPSA 853 >gi|296394017|ref|YP_003658901.1| ATP-dependent chaperone ClpB [Segniliparus rotundus DSM 44985] gi|296181164|gb|ADG98070.1| ATP-dependent chaperone ClpB [Segniliparus rotundus DSM 44985] Length=852 Score = 1302 bits (3369), Expect = 0.0, Method: Compositional matrix adjust. Identities = 658/849 (78%), Positives = 749/849 (89%), Gaps = 5/849 (0%) Query 4 FNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATVRAE 63 F PTTK QAAL++A+QAA+ AG PE+RP +L+ALL Q DGIAAPLL A G +P TV + Sbjct 3 FQPTTKAQAALSSAMQAATAAGRPEVRPEDVLLALLEQTDGIAAPLLRASGADPRTVTEQ 62 Query 64 TQRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDSDVA 123 + + LP G ++ P+LSRE A+ TA +LA EL DEYVSTEH++VGLATGDS A Sbjct 63 ARAAVAALPTVHGGASAPRLSRELAQALETAAKLAAELRDEYVSTEHLIVGLATGDSAAA 122 Query 124 KLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPVIGR 183 K+L HGA+P ALREAF +VRG+ARVT+P+PE++Y+AL+KYSTDLTA AR GKLDPVIGR Sbjct 123 KILAEHGAAPAALREAFTEVRGNARVTTPDPESSYKALEKYSTDLTALARSGKLDPVIGR 182 Query 184 DNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVALDLG 243 D EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLR KT+V+LDLG Sbjct 183 DTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKTLVSLDLG 242 Query 244 SMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMIKPM 303 SM+AG+KYRGEFEERLKAVL++IK S GQ+ITF+DELHTIVG GA+GE AMDAGNMIKP+ Sbjct 243 SMLAGAKYRGEFEERLKAVLEEIKGSEGQVITFVDELHTIVGTGASGESAMDAGNMIKPL 302 Query 304 LARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEVHHG 363 LARGELRLVGATTLDEYR++IEKDAALERRFQQV VGEPSVEDT+GILRGLK+RYEVHHG Sbjct 303 LARGELRLVGATTLDEYRQYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKERYEVHHG 362 Query 364 VRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLVRRL 423 VRITDSALVAAATLSDRYIT+RFLPDKAIDLVDEAASRLRMEIDSRPVE+DEVER+VRRL Sbjct 363 VRITDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPVEVDEVERVVRRL 422 Query 424 EIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQLEAL 483 E+EE+AL+KE DEAS RL KLR ELADQ+E+LAELT RWQ+EK+AI+ VRD+KEQLEAL Sbjct 423 EVEELALAKESDEASVARLDKLRGELADQRERLAELTARWQHEKHAIDAVRDVKEQLEAL 482 Query 484 RGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQ----AREQVMLKEEVGPDDIA 539 RGE++RAERDGDL +AAELRYGRIPE E++L A L A A QVMLKEEVGPDDIA Sbjct 483 RGEADRAERDGDLGRAAELRYGRIPEAEREL-ARLTGANGADGANGQVMLKEEVGPDDIA 541 Query 540 DVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRP 599 +VVS+WTG+PAGR++EGE+AKLLRME ELGKRV+ QK A+ AVSDAVRR+RAGV+D NRP Sbjct 542 EVVSSWTGVPAGRMMEGESAKLLRMEQELGKRVVSQKKAIRAVSDAVRRARAGVADLNRP 601 Query 600 TGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYE 659 TG+F+FLGPTGVGKTELAKALA+FLFDDERA++RIDMSEY EKH+VARL+GAPPGYVGY+ Sbjct 602 TGSFLFLGPTGVGKTELAKALAEFLFDDERAIIRIDMSEYAEKHSVARLMGAPPGYVGYD 661 Query 660 AGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILT 719 GGQLTEAVRRRPY+VVLFDE+EKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTILILT Sbjct 662 QGGQLTEAVRRRPYSVVLFDEVEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILT 721 Query 720 SNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQR 779 SNLG+GG+ E+ + AVR FKPEFINRLDD++IFEGLNPEELV IVDIQL QL KRL QR Sbjct 722 SNLGAGGTEEETMLAVRMAFKPEFINRLDDIVIFEGLNPEELVGIVDIQLGQLQKRLGQR 781 Query 780 RLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVS 839 RL L V+ AK WLA RGFDPVYGARPLRRL+Q AIGD+LAK LL+G V DGD V V V Sbjct 782 RLSLDVTDAAKHWLASRGFDPVYGARPLRRLIQHAIGDELAKQLLSGAVRDGDEVAVGVG 841 Query 840 PDADSLILG 848 D D L++G Sbjct 842 SDPDKLVIG 850 >gi|331700249|ref|YP_004336488.1| ATP-dependent chaperone ClpB [Pseudonocardia dioxanivorans CB1190] gi|326954938|gb|AEA28635.1| ATP-dependent chaperone ClpB [Pseudonocardia dioxanivorans CB1190] Length=871 Score = 1301 bits (3368), Expect = 0.0, Method: Compositional matrix adjust. Identities = 666/853 (79%), Positives = 738/853 (87%), Gaps = 11/853 (1%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +D+FNPTTKTQ A++AA QAA+ AGNP++ P HLL ALL Q DGIAAPLLEAVG + A V Sbjct 1 MDAFNPTTKTQQAISAAAQAATLAGNPDVGPTHLLGALLAQGDGIAAPLLEAVGADAAAV 60 Query 61 RAETQRLLDRLPQATGAS-TQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGD 119 RAE +L RLP A G++ + PQLSRE+LAAIT AQQLATE+ DEYVSTEH++VGLA Sbjct 61 RAELTQLGQRLPAAAGSTVSAPQLSREALAAITAAQQLATEMGDEYVSTEHLLVGLADKG 120 Query 120 SDVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDP 179 VA LL HGA+P ALREAF KVRGS+RVTSP+PE TYQAL+KY DLTARAREGKLDP Sbjct 121 GPVADLLRRHGATPDALREAFTKVRGSSRVTSPDPEGTYQALEKYGQDLTARAREGKLDP 180 Query 180 VIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVA 239 VIGRD EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDK +VA Sbjct 181 VIGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKRVVA 240 Query 240 LDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNM 299 LDLGSMVAG+KYRGEFEERLKAVL +I +SAG+IITFIDELHTIVGAGATGEGAMDAGNM Sbjct 241 LDLGSMVAGAKYRGEFEERLKAVLKEITDSAGEIITFIDELHTIVGAGATGEGAMDAGNM 300 Query 300 IKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYE 359 IKPMLARGELR+VGATTLDEYR+HIEKD ALERRFQQV VGEPSVEDT+GILRGLK+RYE Sbjct 301 IKPMLARGELRMVGATTLDEYRQHIEKDPALERRFQQVLVGEPSVEDTVGILRGLKERYE 360 Query 360 VHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERL 419 VHHGVRITD+ALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEID VER Sbjct 361 VHHGVRITDAALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDTVERA 420 Query 420 VRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQ 479 VRRLEIEEMAL KE D AS ERLA LRSELA+++E+L+ LT RWQNEK AIE R+L Q Sbjct 421 VRRLEIEEMALEKESDAASKERLAALRSELAEKREQLSALTARWQNEKGAIEATRELAAQ 480 Query 480 LEALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIA 539 LE LRGE ERA+RDGDL +A+EL YGRIP +EK+L A + E VMLKEEVGPDD+A Sbjct 481 LEQLRGEYERADRDGDLGRASELLYGRIPALEKELAAKTADVERTEDVMLKEEVGPDDVA 540 Query 540 DVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRP 599 DVVSAWTGIPAGR+LEGETAKLLRMEDELGKRV+GQ AV +VSDAVRR+RAG++D NRP Sbjct 541 DVVSAWTGIPAGRMLEGETAKLLRMEDELGKRVVGQAEAVRSVSDAVRRARAGIADENRP 600 Query 600 TGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYE 659 TG+F+FLGPTGVGKTELAKALA+FLFDDERAMVRIDMSEY EKH+VARL+GAPPGYVGY+ Sbjct 601 TGSFLFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYSEKHSVARLVGAPPGYVGYD 660 Query 660 AGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILT 719 GGQLTEAVRRRPYTVVLFDE+EKAHPDVFD LLQVLD+GRLTDG GRTVDFRNTIL+LT Sbjct 661 QGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDTLLQVLDDGRLTDGQGRTVDFRNTILVLT 720 Query 720 SNLGSGGSA----------EQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQL 769 SNLGS A + V++ V+ FKPEF+NRLDDV++F L+ EEL IVDIQL Sbjct 721 SNLGSQAIADPALDDAARKDAVMSVVQRHFKPEFLNRLDDVVVFHALSTEELTHIVDIQL 780 Query 770 AQLGKRLAQRRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVH 829 LG RLA+RRL L VS A+ WLA GFDPVYGARPLRRLVQ +IGDQLAK LLAG V Sbjct 781 GVLGNRLARRRLTLDVSDAAREWLAMNGFDPVYGARPLRRLVQSSIGDQLAKELLAGAVR 840 Query 830 DGDTVPVNVSPDA 842 +GDTV V++ P A Sbjct 841 EGDTVRVDLDPSA 853 >gi|145296772|ref|YP_001139593.1| hypothetical protein cgR_2676 [Corynebacterium glutamicum R] gi|140846692|dbj|BAF55691.1| hypothetical protein [Corynebacterium glutamicum R] gi|344046162|gb|EGV41828.1| hypothetical protein CgS9114_00385 [Corynebacterium glutamicum S9114] Length=852 Score = 1281 bits (3315), Expect = 0.0, Method: Compositional matrix adjust. Identities = 629/840 (75%), Positives = 730/840 (87%), Gaps = 1/840 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 + SFNPTTKT A+ AALQ AS+AGNP+IRPAHLL A+L QNDG+AAP+L A GV+P + Sbjct 1 MSSFNPTTKTNEAMQAALQQASSAGNPDIRPAHLLAAILEQNDGVAAPVLTATGVDPKEI 60 Query 61 RAETQRLLDRLPQATGAS-TQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGD 119 AE ++L+ P+A+GA+ P +R++L A T AQ+LA EL DEYVSTE ++ G+A G Sbjct 61 LAEAKKLVASYPKASGANMANPNFNRDALNAFTAAQELAGELGDEYVSTEVLLAGIARGK 120 Query 120 SDVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDP 179 SD A LLT GA+ A++EAF VRGS RVT+ +PE +QAL+KYSTDLT AREGK+DP Sbjct 121 SDAADLLTSKGATYDAIKEAFPSVRGSQRVTTQDPEGQFQALEKYSTDLTKLAREGKIDP 180 Query 180 VIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVA 239 VIGRD EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLA+RIVAGDVPESL+ KT+++ Sbjct 181 VIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLIS 240 Query 240 LDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNM 299 LDLGSMVAG+KYRGEFEERLKAVLD+IK + G+++TFIDELHTIVGAGA+GE AMDAGNM Sbjct 241 LDLGSMVAGAKYRGEFEERLKAVLDEIKGANGEVVTFIDELHTIVGAGASGESAMDAGNM 300 Query 300 IKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYE 359 IKP+LARGELRLVGATTL+EYRK+IEKDAALERRFQQVYVGEP+VED IGILRGLK+RYE Sbjct 301 IKPLLARGELRLVGATTLNEYRKYIEKDAALERRFQQVYVGEPTVEDAIGILRGLKERYE 360 Query 360 VHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERL 419 VHHGVRI DSALVAAA LS+RYIT+RFLPDKAIDLVDEAASRLRMEIDS P EIDE+ER+ Sbjct 361 VHHGVRIQDSALVAAAELSNRYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERI 420 Query 420 VRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQ 479 VRRLEIEEMALSKE D AS ERL KLRSELAD++EKL+EL RWQNEK AI+ VR++KE+ Sbjct 421 VRRLEIEEMALSKESDAASKERLEKLRSELADEREKLSELKARWQNEKTAIDDVREMKEE 480 Query 480 LEALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIA 539 LEALR ES+ AERDG+ + AELRYGRIPE+EK+++ A + + E ML EEV PD IA Sbjct 481 LEALRSESDIAERDGNYGRVAELRYGRIPELEKQIEDAESKVEVNENAMLTEEVTPDTIA 540 Query 540 DVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRP 599 DVVSAWTGIPAG++++GET KLL ME LG RV+GQ AVTAVSDAVRRSRAGV+DPNRP Sbjct 541 DVVSAWTGIPAGKMMQGETEKLLNMERVLGNRVVGQLEAVTAVSDAVRRSRAGVADPNRP 600 Query 600 TGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYE 659 TG+F+FLGPTGVGKTELAKA+A+FLFDD+RAM+RIDMSEYGEKH+VARL+GAPPGYVGY+ Sbjct 601 TGSFLFLGPTGVGKTELAKAVAEFLFDDDRAMIRIDMSEYGEKHSVARLVGAPPGYVGYD 660 Query 660 AGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILT 719 GGQLTEAVRRRPYTVVLFDE+EKAH DVFD+LLQVLDEGRLTDG GRTVDFRNTILILT Sbjct 661 QGGQLTEAVRRRPYTVVLFDEVEKAHSDVFDILLQVLDEGRLTDGQGRTVDFRNTILILT 720 Query 720 SNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQR 779 SNLG+GG+ EQ++ AV+ FKPEF+NRLDDV+IF+ L+PE+L IVDIQ+ QL RLA R Sbjct 721 SNLGAGGTREQMMDAVKMAFKPEFVNRLDDVVIFDRLSPEQLTSIVDIQIKQLTDRLADR 780 Query 780 RLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVS 839 RL L+VS AK WLA+RG+DP YGARPLRRL+QQAIGD LAK LLAG V DGD V V+V+ Sbjct 781 RLNLRVSDSAKAWLAERGYDPAYGARPLRRLIQQAIGDTLAKELLAGNVRDGDAVLVDVA 840 >gi|19553971|ref|NP_601973.1| ATPase with chaperone activity, ATP-binding subunit [Corynebacterium glutamicum ATCC 13032] gi|62391615|ref|YP_227017.1| ATP-dependent protease [Corynebacterium glutamicum ATCC 13032] gi|1705922|sp|P53532.1|CLPB_CORGL RecName: Full=Chaperone protein ClpB gi|1163118|gb|AAB49540.1| heat-inducible expression; two ATP-binding domains; ClpB homolog, similar to E. coli ClpB protein, Swiss-Prot Accession Number P03815 [Corynebacterium glutamicum] gi|21325552|dbj|BAC00174.1| ATPases with chaperone activity, ATP-binding subunit [Corynebacterium glutamicum ATCC 13032] gi|41326957|emb|CAF20801.1| PROBABLE ATP-DEPENDENT PROTEASE (HEAT SHOCK PROTEIN) [Corynebacterium glutamicum ATCC 13032] Length=852 Score = 1280 bits (3313), Expect = 0.0, Method: Compositional matrix adjust. Identities = 629/840 (75%), Positives = 730/840 (87%), Gaps = 1/840 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 + SFNPTTKT A+ AALQ AS+AGNP+IRPAHLL A+L Q DG+AAP+L A GV+P + Sbjct 1 MSSFNPTTKTNEAMQAALQQASSAGNPDIRPAHLLAAILEQTDGVAAPVLMATGVDPKEI 60 Query 61 RAETQRLLDRLPQATGAS-TQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGD 119 AE ++L+ P+A+GA+ P +R++L A T AQ+LA EL DEYVSTE ++ G+A G Sbjct 61 LAEAKKLVASYPKASGANMANPNFNRDALNAFTAAQELAGELGDEYVSTEVLLAGIARGK 120 Query 120 SDVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDP 179 SD A LLT GA+ A++EAF VRGS RVT+ +PE +QAL+KYSTDLT AREGK+DP Sbjct 121 SDAADLLTNKGATYDAIKEAFPSVRGSQRVTTQDPEGQFQALEKYSTDLTKLAREGKIDP 180 Query 180 VIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVA 239 VIGRD EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLA+RIVAGDVPESL+ KT+++ Sbjct 181 VIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLIS 240 Query 240 LDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNM 299 LDLGSMVAG+KYRGEFEERLKAVLD+IK + G+++TFIDELHTIVGAGA+GE AMDAGNM Sbjct 241 LDLGSMVAGAKYRGEFEERLKAVLDEIKGANGEVVTFIDELHTIVGAGASGESAMDAGNM 300 Query 300 IKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYE 359 IKP+LARGELRLVGATTL+EYRK+IEKDAALERRFQQVYVGEP+VED IGILRGLK+RYE Sbjct 301 IKPLLARGELRLVGATTLNEYRKYIEKDAALERRFQQVYVGEPTVEDAIGILRGLKERYE 360 Query 360 VHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERL 419 VHHGVRI DSALVAAA LS+RYIT+RFLPDKAIDLVDEAASRLRMEIDS P EIDE+ER+ Sbjct 361 VHHGVRIQDSALVAAAELSNRYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERI 420 Query 420 VRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQ 479 VRRLEIEEMALSKE D AS ERL KLRSELAD++EKL+EL RWQNEK AI+ VR++KE+ Sbjct 421 VRRLEIEEMALSKESDAASKERLEKLRSELADEREKLSELKARWQNEKTAIDDVREMKEE 480 Query 480 LEALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIA 539 LEALR ES+ AERDG+ + AELRYGRIPE+EK+++ A + + E ML EEV PD IA Sbjct 481 LEALRSESDIAERDGNYGRVAELRYGRIPELEKQIEDAESKVEVNENAMLTEEVTPDTIA 540 Query 540 DVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRP 599 DVVSAWTGIPAG++++GET KLL ME LG RV+GQ AVTAVSDAVRRSRAGV+DPNRP Sbjct 541 DVVSAWTGIPAGKMMQGETEKLLNMERVLGNRVVGQLEAVTAVSDAVRRSRAGVADPNRP 600 Query 600 TGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYE 659 TG+F+FLGPTGVGKTELAKA+A+FLFDD+RAM+RIDMSEYGEKH+VARL+GAPPGYVGY+ Sbjct 601 TGSFLFLGPTGVGKTELAKAVAEFLFDDDRAMIRIDMSEYGEKHSVARLVGAPPGYVGYD 660 Query 660 AGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILT 719 GGQLTEAVRRRPYTVVLFDE+EKAHPDVFD+LLQVLDEGRLTDG GRTVDFRNTILILT Sbjct 661 QGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVLDEGRLTDGQGRTVDFRNTILILT 720 Query 720 SNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQR 779 SNLG+GG+ EQ++ AV+ FKPEF+NRLDDV+IF+ L+PE+L IVDIQ+ QL RLA R Sbjct 721 SNLGAGGTREQMMDAVKMAFKPEFVNRLDDVVIFDRLSPEQLTSIVDIQIKQLTDRLAGR 780 Query 780 RLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVS 839 RL L+VS AK WLA+RG+DP YGARPLRRL+QQAIGD LAK LLAG V DGD V V+V+ Sbjct 781 RLNLRVSDSAKAWLAERGYDPAYGARPLRRLIQQAIGDTLAKELLAGNVRDGDGVLVDVA 840 >gi|256380924|ref|YP_003104584.1| ATP-dependent chaperone ClpB [Actinosynnema mirum DSM 43827] gi|255925227|gb|ACU40738.1| ATP-dependent chaperone ClpB [Actinosynnema mirum DSM 43827] Length=860 Score = 1276 bits (3302), Expect = 0.0, Method: Compositional matrix adjust. Identities = 650/859 (76%), Positives = 738/859 (86%), Gaps = 12/859 (1%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +D+FNPTTK+Q A++AA+QAA+ AGNP++ P HLL ALL Q +G+AAPLL VG +P + Sbjct 1 MDAFNPTTKSQQAVSAAVQAATIAGNPDVGPVHLLGALLAQGEGLAAPLLSGVGADPGVI 60 Query 61 RAETQRLLDRLPQATGAS-TQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGD 119 R E ++L LP A+G+S + PQ SR+++ +T AQ+LATE+ DEYVSTEH++VGLA Sbjct 61 RKELEQLSRTLPAASGSSISAPQFSRDAVRVLTRAQELATEMGDEYVSTEHLLVGLAQHG 120 Query 120 SDVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDP 179 VA LL HGA+P+ALREAF KVRGSARVTSP+PE TY+AL+KY DLTARAR G+LDP Sbjct 121 GQVADLLRRHGANPEALREAFEKVRGSARVTSPDPEGTYKALEKYGVDLTARARRGELDP 180 Query 180 VIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVA 239 VIGRD+EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQR+VAGDVPESLR K +V+ Sbjct 181 VIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRVVAGDVPESLRGKRVVS 240 Query 240 LDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNM 299 LDLGSMVAG+KYRGEFEERLKAVL +I +SAGQ+ITFIDELHTIVGAGATGE AMDAGNM Sbjct 241 LDLGSMVAGAKYRGEFEERLKAVLKEITDSAGQVITFIDELHTIVGAGATGESAMDAGNM 300 Query 300 IKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYE 359 IKPMLARGELRLVGATTLDEYR H+EKD ALERRFQQV VGEPSVEDTIGILRGLK+RYE Sbjct 301 IKPMLARGELRLVGATTLDEYRSHVEKDPALERRFQQVLVGEPSVEDTIGILRGLKERYE 360 Query 360 VHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERL 419 VHHGVRITD+ALVAA+TLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVER Sbjct 361 VHHGVRITDAALVAASTLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERA 420 Query 420 VRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQ 479 VRRLEIEEMAL+KE DEAS ERLA LR+ELA+++E LA LT RWQNEK +I+ VR LKEQ Sbjct 421 VRRLEIEEMALAKESDEASRERLAALRAELAERRESLAALTARWQNEKGSIDKVRVLKEQ 480 Query 480 LEALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIA 539 LE LRGESERAERDGDL +AAELRYGRIP +EK+L+ A Q VMLKEEVGPDD+A Sbjct 481 LEQLRGESERAERDGDLGRAAELRYGRIPALEKELEEATRTTQ-EAAVMLKEEVGPDDVA 539 Query 540 DVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRP 599 DVVSAWTGIPAGR+LEGET KLLRMEDEL RV+GQ AV VSDAVRR+RAGV+DP+RP Sbjct 540 DVVSAWTGIPAGRMLEGETTKLLRMEDELTGRVVGQAEAVRVVSDAVRRTRAGVADPDRP 599 Query 600 TGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYE 659 TG+F+FLGPTGVGKTELAKALA FLFDDERAM+RIDMSEY EKH+VARL+GAPPGYVGY+ Sbjct 600 TGSFLFLGPTGVGKTELAKALAQFLFDDERAMIRIDMSEYSEKHSVARLVGAPPGYVGYD 659 Query 660 AGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILT 719 GGQLTE+VRRRPY+VVL DE+EKAHPDVFDVLLQVLD+GRLTDG GRTVDFRNTIL+LT Sbjct 660 QGGQLTESVRRRPYSVVLLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILVLT 719 Query 720 SNLGSG----------GSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQL 769 SNLGS G + V+ VR FKPEF+NRLDDV++F L EEL IVDIQ+ Sbjct 720 SNLGSHAIADVSLDERGREDAVMQVVRGHFKPEFLNRLDDVVVFRSLATEELTSIVDIQV 779 Query 770 AQLGKRLAQRRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVH 829 A+L RLAQRRL L+V+ A+ WLA GFDPVYGARPLRRLVQ +IGDQLA+ LL+G+V Sbjct 780 AKLAARLAQRRLVLEVTPAAREWLALNGFDPVYGARPLRRLVQSSIGDQLARELLSGEVR 839 Query 830 DGDTVPVNVSPDADSLILG 848 DGD V V+V DA LI+G Sbjct 840 DGDAVRVDVLDDATGLIVG 858 >gi|134103621|ref|YP_001109282.1| putative Clp protease ATP-binding subunit [Saccharopolyspora erythraea NRRL 2338] gi|291004842|ref|ZP_06562815.1| putative Clp protease ATP-binding subunit [Saccharopolyspora erythraea NRRL 2338] gi|133916244|emb|CAM06357.1| putative Clp protease ATP-binding subunit [Saccharopolyspora erythraea NRRL 2338] Length=860 Score = 1270 bits (3286), Expect = 0.0, Method: Compositional matrix adjust. Identities = 646/858 (76%), Positives = 737/858 (86%), Gaps = 12/858 (1%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +D+FNPTTKTQ A+++A QAA+ AGNP++ PAHLL ALL Q DG+ APLL AV +PA V Sbjct 1 MDAFNPTTKTQQAISSAAQAATVAGNPDVTPAHLLGALLAQGDGLTAPLLSAVDADPAEV 60 Query 61 RAETQRLLDRLPQATGAS-TQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGD 119 R+E +R+++ LP A+G++ + PQLSRE++ ++T Q LATE+ D+YVSTEH++VGLAT Sbjct 61 RSELERIINALPAASGSTVSAPQLSREAVRSLTHGQHLATEMGDDYVSTEHLLVGLATEG 120 Query 120 SDVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDP 179 VA LL HGA+P+AL++AF KVRGSARV+SP+PE TY+AL+KY DLT RAR G +DP Sbjct 121 GQVADLLRKHGATPEALKDAFAKVRGSARVSSPDPEGTYKALEKYGQDLTDRARRGDVDP 180 Query 180 VIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVA 239 VIGRD EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLR K +V+ Sbjct 181 VIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKRVVS 240 Query 240 LDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNM 299 LDLGSMVAG+KYRGEFEERLKAVL +I SAGQIITFIDELHTIVGAGATGEGAMDAGNM Sbjct 241 LDLGSMVAGAKYRGEFEERLKAVLKEITESAGQIITFIDELHTIVGAGATGEGAMDAGNM 300 Query 300 IKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYE 359 IKPMLARGELR+VGATTLDEYR+HIE DAALERRFQQV VGEPS EDT+ ILRGLK+RYE Sbjct 301 IKPMLARGELRMVGATTLDEYREHIETDAALERRFQQVLVGEPSPEDTVAILRGLKERYE 360 Query 360 VHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERL 419 VHHGVRITD ALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVER Sbjct 361 VHHGVRITDGALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERA 420 Query 420 VRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQ 479 VRRLEIEEMAL+KEED AS +RLA LRSELAD++EKL+ELT RWQ EK +I+ +R LK Q Sbjct 421 VRRLEIEEMALAKEEDPASLDRLAALRSELADRREKLSELTARWQGEKESIDKIRVLKTQ 480 Query 480 LEALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIA 539 LE LRGESERAERDGDL KAAELRYGRIP +EK+LD+A AQ+R + ML+EEV PDD+A Sbjct 481 LEQLRGESERAERDGDLGKAAELRYGRIPTLEKELDSATA-AQSRHKAMLQEEVTPDDVA 539 Query 540 DVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRP 599 DVVSAWTGIPAGRLLEGET KLLRMEDEL RV+GQ AV AVSDAVRR+RAGVSDP+RP Sbjct 540 DVVSAWTGIPAGRLLEGETTKLLRMEDELSARVVGQAEAVRAVSDAVRRARAGVSDPDRP 599 Query 600 TGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYE 659 TG+FMFLGPTGVGKTELAKALA FLFDD+RAMVRIDMSEY EKH+VARL+GAPPGYVGY+ Sbjct 600 TGSFMFLGPTGVGKTELAKALAGFLFDDDRAMVRIDMSEYSEKHSVARLVGAPPGYVGYD 659 Query 660 AGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILT 719 GGQLTE+VRRRPY+VVLFDE+EKAH DVFDVLLQ LD+GRLTDG GRTVDFR+TIL+LT Sbjct 660 QGGQLTESVRRRPYSVVLFDEVEKAHQDVFDVLLQALDDGRLTDGQGRTVDFRSTILVLT 719 Query 720 SNLGSGGSA----------EQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQL 769 SNLGS A E V A V FKPEF+NRLDDV++F L+ EEL IVDIQ+ Sbjct 720 SNLGSQAIADPNLTEQQRDEAVRAVVHQHFKPEFLNRLDDVVVFHALSTEELTSIVDIQV 779 Query 770 AQLGKRLAQRRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVH 829 +L +RLAQRRL L V A+ WLA GFDPV+GARPLRRLVQ AIGDQLAK LL G++ Sbjct 780 ERLAQRLAQRRLVLDVQPAARDWLALNGFDPVFGARPLRRLVQSAIGDQLAKKLLGGEIR 839 Query 830 DGDTVPVNVSPDADSLIL 847 +GD V V+ + D+ +L++ Sbjct 840 EGDKVRVDTNDDSSALVV 857 >gi|300859293|ref|YP_003784276.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium pseudotuberculosis FRC41] gi|300686747|gb|ADK29669.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium pseudotuberculosis FRC41] gi|302331542|gb|ADL21736.1| ATP-dependent chaperone protein ClpB [Corynebacterium pseudotuberculosis 1002] gi|308277232|gb|ADO27131.1| ATP-dependent chaperone protein ClpB [Corynebacterium pseudotuberculosis I19] Length=849 Score = 1267 bits (3279), Expect = 0.0, Method: Compositional matrix adjust. Identities = 631/848 (75%), Positives = 728/848 (86%), Gaps = 3/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 ++SFNPTTKTQ AL ALQ AS+ GNP+IRPAHLL A+L Q DGIA P+L A GV+P V Sbjct 1 MNSFNPTTKTQEALQVALQQASSLGNPDIRPAHLLAAILGQEDGIAVPVLRATGVDPQVV 60 Query 61 RAETQRLLDRLPQATGAS-TQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGD 119 E L+ P+A G+ P +R++L A+T AQ+LA EL DEYVSTE ++ +A G Sbjct 61 AKEANALVAGYPKAEGSGMANPNFNRDALNALTAAQELAGELGDEYVSTEVLLAAIARGK 120 Query 120 SDVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDP 179 SD A+LLT GA+ ++ F VRGS +VTS +PE +QAL+KYSTDLTARAREGK+DP Sbjct 121 SDAAELLTKRGATYDVIKGVFPSVRGSKKVTSQDPEGQFQALEKYSTDLTARAREGKIDP 180 Query 180 VIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVA 239 VIGRD+EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLA+RIVAGDVPESL+ KT+++ Sbjct 181 VIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLIS 240 Query 240 LDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNM 299 LDLGSMVAG+KYRGEFEERLKAVLD+IK++ G+IITFIDELHTIVGAGATG+ AMDAGNM Sbjct 241 LDLGSMVAGAKYRGEFEERLKAVLDEIKSAEGEIITFIDELHTIVGAGATGDSAMDAGNM 300 Query 300 IKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYE 359 IKP+LARGELRLVGATTLDEYRK+IEKDAALERRFQQV+VGEPSVED IGILRGLK+RYE Sbjct 301 IKPLLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDAIGILRGLKERYE 360 Query 360 VHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERL 419 VHHGVRI DSALVAAATLSDRYIT+RFLPDKAIDLVDEAASRLRMEIDS P EIDE+ER+ Sbjct 361 VHHGVRIQDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERV 420 Query 420 VRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQ 479 VRRLEIEE+ALSKE D AS +RL KLR ELAD++EKL EL RW NEK+AI+ VR+ KE+ Sbjct 421 VRRLEIEEVALSKETDAASQQRLEKLRQELADEREKLGELKARWNNEKSAIDKVREAKEE 480 Query 480 LEALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIA 539 LE LR ESE AER+GD K AELRYGRIPE+EK++ A +A E ML EEV PD IA Sbjct 481 LEHLRSESEIAEREGDYGKVAELRYGRIPELEKQVAEA--EAHTTETTMLSEEVTPDTIA 538 Query 540 DVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRP 599 DVVSAWTGIPAG++L+GET KLLRME ELG RV+GQ AV AVSDAVRR+RAGV+DPNRP Sbjct 539 DVVSAWTGIPAGKMLQGETEKLLRMESELGSRVVGQLEAVEAVSDAVRRARAGVADPNRP 598 Query 600 TGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYE 659 TG+F+FLGPTGVGKTELAKALA+F+FDDERAMVRIDMSEYGEKH+VARL+GAPPGYVGY+ Sbjct 599 TGSFLFLGPTGVGKTELAKALAEFMFDDERAMVRIDMSEYGEKHSVARLVGAPPGYVGYD 658 Query 660 AGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILT 719 GGQLTEAVRRRPYTVVLFDE+EKAH DVFD+LLQVLDEGRLTDG GRTVDFRNT+LILT Sbjct 659 QGGQLTEAVRRRPYTVVLFDEVEKAHSDVFDILLQVLDEGRLTDGQGRTVDFRNTVLILT 718 Query 720 SNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQR 779 SNLG+GG+ EQ++ AV+ FKPEF+NRLDDV IF+ L+ E+L IV+IQ+AQL RL+ R Sbjct 719 SNLGAGGTREQMMDAVKRAFKPEFVNRLDDVAIFDPLSEEQLTHIVEIQIAQLANRLSAR 778 Query 780 RLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVS 839 RL LQVS AK WLA+RG++P YGARPLRRL+QQAIGDQLAK LLAG++ DGDTV V+V+ Sbjct 779 RLTLQVSDAAKLWLAERGYEPAYGARPLRRLIQQAIGDQLAKKLLAGEIRDGDTVHVDVA 838 Query 840 PDADSLIL 847 ++L L Sbjct 839 DGGEALEL 846 >gi|302206981|gb|ADL11323.1| ATP-dependent chaperone protein ClpB [Corynebacterium pseudotuberculosis C231] gi|341825676|gb|AEK93197.1| ATP-dependent chaperone protein ClpB [Corynebacterium pseudotuberculosis PAT10] Length=849 Score = 1265 bits (3274), Expect = 0.0, Method: Compositional matrix adjust. Identities = 630/848 (75%), Positives = 728/848 (86%), Gaps = 3/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 ++SFNPTTKTQ AL ALQ AS+ GNP+IRPAHLL A+L Q DGIA P+L A GV+P V Sbjct 1 MNSFNPTTKTQEALQVALQQASSLGNPDIRPAHLLAAILGQEDGIAVPVLRATGVDPQVV 60 Query 61 RAETQRLLDRLPQATGAS-TQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGD 119 E L+ P+A G+ P +R++L A+T AQ+LA EL DEYVSTE ++ +A G Sbjct 61 AKEANALVAGYPKAEGSGMANPNFNRDALNALTAAQELAGELGDEYVSTEVLLAAIARGK 120 Query 120 SDVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDP 179 SD A+LLT GA+ ++ F VRGS +VTS +PE +QAL+KYSTDLTARAREGK+DP Sbjct 121 SDAAELLTKRGATYDVIKGVFPSVRGSKKVTSQDPEGQFQALEKYSTDLTARAREGKIDP 180 Query 180 VIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVA 239 VIGRD+EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLA+RIVAGDVPESL+ KT+++ Sbjct 181 VIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLIS 240 Query 240 LDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNM 299 LDLGSMVAG+KYRGEFEERLKAVLD+IK++ G+IITFIDELHTIVGAGATG+ AMDAGNM Sbjct 241 LDLGSMVAGAKYRGEFEERLKAVLDEIKSAEGEIITFIDELHTIVGAGATGDSAMDAGNM 300 Query 300 IKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYE 359 IKP+LARGELRLVGATTLDEYRK+IEKDAALERRFQQV+VGEPSVED IGILRGLK+RYE Sbjct 301 IKPLLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDAIGILRGLKERYE 360 Query 360 VHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERL 419 VHHGVRI DSALVAAATLSDRYIT+RFLPDKAIDLVDEAASRLRMEIDS P EIDE+ER+ Sbjct 361 VHHGVRIQDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERV 420 Query 420 VRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQ 479 VRRLEIEE+ALSKE D AS +RL KLR ELAD++EKL EL RW NEK+AI+ VR+ KE+ Sbjct 421 VRRLEIEEVALSKETDAASQQRLEKLRQELADEREKLGELKARWNNEKSAIDKVREAKEE 480 Query 480 LEALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIA 539 LE LR ESE AER+GD K AELRYGRIPE+EK++ A +A E ML EEV PD IA Sbjct 481 LEHLRSESEIAEREGDYGKVAELRYGRIPELEKQVAEA--EAHTTETTMLSEEVTPDTIA 538 Query 540 DVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRP 599 DVVSAWTGIPAG++L+GET KLLRME ELG RV+GQ AV AVSDAVRR+RAGV+DPNRP Sbjct 539 DVVSAWTGIPAGKMLQGETEKLLRMESELGSRVVGQLEAVEAVSDAVRRARAGVADPNRP 598 Query 600 TGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYE 659 TG+F+FLGPTGVGKTELAKALA+F+FDDERAMVRIDMSEYGEKH+VARL+GAPPGYVGY+ Sbjct 599 TGSFLFLGPTGVGKTELAKALAEFMFDDERAMVRIDMSEYGEKHSVARLVGAPPGYVGYD 658 Query 660 AGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILT 719 GGQLTEAVRRRPYTVVLFDE+EKAH DVFD+LLQVLDEGRLTDG GRTVDFRNT+LILT Sbjct 659 QGGQLTEAVRRRPYTVVLFDEVEKAHSDVFDILLQVLDEGRLTDGQGRTVDFRNTVLILT 718 Query 720 SNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQR 779 SNLG+GG+ EQ++ AV+ FKPEF+NRLDDV IF+ L+ E+L IV+IQ+AQL RL+ R Sbjct 719 SNLGAGGTREQMMDAVKRAFKPEFVNRLDDVAIFDPLSEEQLTHIVEIQIAQLANRLSAR 778 Query 780 RLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVS 839 RL LQVS A+ WLA+RG++P YGARPLRRL+QQAIGDQLAK LLAG++ DGDTV V+V+ Sbjct 779 RLTLQVSDAARLWLAERGYEPAYGARPLRRLIQQAIGDQLAKKLLAGEIRDGDTVHVDVA 838 Query 840 PDADSLIL 847 ++L L Sbjct 839 DGGEALEL 846 >gi|302531164|ref|ZP_07283506.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4] gi|302440059|gb|EFL11875.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4] Length=864 Score = 1265 bits (3273), Expect = 0.0, Method: Compositional matrix adjust. Identities = 640/850 (76%), Positives = 732/850 (87%), Gaps = 12/850 (1%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +D+FNPTTKTQ A+++A QAA+ AGNP + AH+L ALL Q DG APLL AVG +P TV Sbjct 1 MDAFNPTTKTQQAISSAAQAATVAGNPHVSAAHVLGALLAQGDGTTAPLLTAVGADPETV 60 Query 61 RAETQRLLDRLPQATGAS-TQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGD 119 E + +++ LP ATGA+ + PQ ++ ++T AQ+LATEL DEYVSTEH++VGLAT Sbjct 61 HKELEPIINGLPSATGATVSTPQFDAPAVKSLTQAQKLATELGDEYVSTEHLLVGLATEG 120 Query 120 SDVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDP 179 VA LL HGA+P ALREAF KVRGSAR+TS +PE+T++AL+KY DLT RAR G+LDP Sbjct 121 GQVADLLKRHGATPDALREAFAKVRGSARITSADPESTFKALEKYGVDLTERARSGELDP 180 Query 180 VIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVA 239 VIGRD EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLR K +VA Sbjct 181 VIGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKRVVA 240 Query 240 LDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNM 299 LDLGSMVAG+K+RGEFEERLKAVL +I +SAG++ITFIDELHTIVGAGATGEGAMDAGNM Sbjct 241 LDLGSMVAGAKFRGEFEERLKAVLKEITDSAGEVITFIDELHTIVGAGATGEGAMDAGNM 300 Query 300 IKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYE 359 IKPMLARGELR+VGATTLDEYR+HIEKD ALERRFQQV VGEPS EDTI ILRGLK+RYE Sbjct 301 IKPMLARGELRMVGATTLDEYRQHIEKDPALERRFQQVLVGEPSPEDTIAILRGLKERYE 360 Query 360 VHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERL 419 VHHGVRITD+ALVAAATLSDRYITARFLPDKAIDLVDEAAS++RMEIDSRPVEIDEVER Sbjct 361 VHHGVRITDAALVAAATLSDRYITARFLPDKAIDLVDEAASKIRMEIDSRPVEIDEVERA 420 Query 420 VRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQ 479 VRR+EIEEMALSKE+D AS ERL LR+ELA+++E+L LT RWQNEK +IE VR+LKEQ Sbjct 421 VRRMEIEEMALSKEDDAASLERLTALRAELAEKREELTALTARWQNEKGSIETVRELKEQ 480 Query 480 LEALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQ-VMLKEEVGPDDI 538 LE LRGESERAERDGDL KAAELRYGRIP +EK+ +AA+ +A +Q VMLKEEVG DD+ Sbjct 481 LEQLRGESERAERDGDLGKAAELRYGRIPALEKEFEAAMAANEASKQNVMLKEEVGADDV 540 Query 539 ADVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNR 598 ADVVSAWTGIPAGRLLEGET KLLRME+EL +RVIGQ A+ V+DAVRR+RAGV+DP+R Sbjct 541 ADVVSAWTGIPAGRLLEGETGKLLRMEEELNRRVIGQDQAIQVVADAVRRARAGVADPDR 600 Query 599 PTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGY 658 PTG+F+FLGPTGVGKTELAKALA+FLFDDERAM RIDMSEY EKH+VARL+GAPPGYVGY Sbjct 601 PTGSFLFLGPTGVGKTELAKALAEFLFDDERAMQRIDMSEYSEKHSVARLVGAPPGYVGY 660 Query 659 EAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILIL 718 + GGQLTEAVRRRPYTVVL DE+EKAHPDVFDVLLQVLD+GRLTDG GRTVDFRNTILIL Sbjct 661 DQGGQLTEAVRRRPYTVVLLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILIL 720 Query 719 TSNLGSGGSA----------EQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQ 768 TSNLGS A + V+ V+ FKPEF+NRLDD+++F L E+L IVDIQ Sbjct 721 TSNLGSQAIADPALDERQRRDAVMEVVQRQFKPEFLNRLDDIVVFHALGTEQLTSIVDIQ 780 Query 769 LAQLGKRLAQRRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQV 828 +A+L KRLAQRRL L+V+ A+ WLA GFDP+YGARPLRRLVQ AIGDQLAK LL+G+V Sbjct 781 VARLAKRLAQRRLHLEVTDGAREWLALNGFDPIYGARPLRRLVQSAIGDQLAKQLLSGEV 840 Query 829 HDGDTVPVNV 838 DGDTV V++ Sbjct 841 RDGDTVRVDL 850 >gi|257057792|ref|YP_003135624.1| ATP-dependent chaperone ClpB [Saccharomonospora viridis DSM 43017] gi|256587664|gb|ACU98797.1| ATP-dependent chaperone ClpB [Saccharomonospora viridis DSM 43017] Length=873 Score = 1264 bits (3270), Expect = 0.0, Method: Compositional matrix adjust. Identities = 641/863 (75%), Positives = 739/863 (86%), Gaps = 20/863 (2%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 +D+FNPTTKTQ A+++A QAA+ AGNPEI PAHLL ALL+Q+DG+AAPLL A G +P V Sbjct 1 MDAFNPTTKTQQAISSAAQAATMAGNPEISPAHLLGALLSQSDGLAAPLLTAAGADPGAV 60 Query 61 RAETQRLLDRLPQATGAS-TQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGD 119 R E + ++ LP ATGA+ + PQ ++ ++T AQ+LATE+ DEYVSTEHV+VGLA Sbjct 61 RKELESVISTLPSATGATVSSPQFDTYAVKSLTHAQKLATEMGDEYVSTEHVLVGLAAEG 120 Query 120 SDVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDP 179 VA LL GA+P+ LR+AF KVRGSARVT+P+PE TYQAL+KY DLT RAR G+LDP Sbjct 121 GPVADLLKRQGATPETLRDAFTKVRGSARVTTPDPEGTYQALEKYGVDLTERARAGELDP 180 Query 180 VIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVA 239 VIGRD+EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLR K +VA Sbjct 181 VIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKRVVA 240 Query 240 LDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEG--AMDAG 297 LD+GSMVAG+KYRGEFEERLKAVL +IK S GQ++TFIDELHTIVGAGATG G ++DAG Sbjct 241 LDVGSMVAGAKYRGEFEERLKAVLKEIKESDGQVVTFIDELHTIVGAGATGSGDSSLDAG 300 Query 298 NMIKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDR 357 NMIKPMLARGELR+VGATTLDEYR+HIEKDAALERRFQQV+VGEPSVEDT+GILRGLK+R Sbjct 301 NMIKPMLARGELRMVGATTLDEYREHIEKDAALERRFQQVFVGEPSVEDTVGILRGLKER 360 Query 358 YEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVE 417 YEVHHGVRITD+ALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVE Sbjct 361 YEVHHGVRITDAALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVE 420 Query 418 RLVRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLK 477 R VRR+EIEEMALSKE+D AS ERL LR+ELA+++EKL L RWQNEK+AIE VR LK Sbjct 421 RAVRRMEIEEMALSKEDDPASKERLEALRAELAERREKLNALMARWQNEKSAIERVRGLK 480 Query 478 EQLEALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAAL------PQAQAREQVMLKE 531 EQLE LRGE+ERAERD DL +AAELRYGRIP +EK+L+ A+ P + VMLKE Sbjct 481 EQLEQLRGEAERAERDADLGRAAELRYGRIPALEKELEKAIRDTESDPSGENMADVMLKE 540 Query 532 EVGPDDIADVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRA 591 EVG DD+ADVVSAWTGIPAGRLLEGET KLLRME+ELGKRV+GQ AV VSDAVRR+RA Sbjct 541 EVGADDVADVVSAWTGIPAGRLLEGETGKLLRMEEELGKRVVGQSDAVKVVSDAVRRARA 600 Query 592 GVSDPNRPTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGA 651 GV+DP+RPTG+F+FLGPTGVGKTELAKALA+FLFDDERAM+RIDMSEY EKH+VARL+GA Sbjct 601 GVADPDRPTGSFLFLGPTGVGKTELAKALAEFLFDDERAMLRIDMSEYSEKHSVARLVGA 660 Query 652 PPGYVGYEAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDF 711 PPGYVGY+ GGQLTE+VRRRPY+VVL DE+EKAHPDVFDVLLQVLD+GRLTDG GRTVDF Sbjct 661 PPGYVGYDQGGQLTESVRRRPYSVVLLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDF 720 Query 712 RNTILILTSNLGSGGSA----------EQVLAAVRATFKPEFINRLDDVLIFEGLNPEEL 761 RNTIL+LTSNLGS A + V++ V+ FKPEF+NRLDD+++F L+ E L Sbjct 721 RNTILVLTSNLGSQVIADPTLSEQQRKDSVMSVVQQHFKPEFLNRLDDIVVFHALDTEHL 780 Query 762 VRIVDIQLAQLGKRLAQRRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAK 821 IVDIQ+ +L KRLAQRRL L V+ A+ WLA G+DP+YGARPLRRLVQ AIGD+LAK Sbjct 781 GAIVDIQVGRLAKRLAQRRLTLDVTPAAREWLAMNGYDPIYGARPLRRLVQSAIGDELAK 840 Query 822 MLLAGQVHDGDTVPVNVSPDADS 844 LLAG++ DGDTV V+V P++D+ Sbjct 841 KLLAGEIKDGDTVRVDV-PESDT 862 >gi|260578525|ref|ZP_05846437.1| chaperone protein ClpB [Corynebacterium jeikeium ATCC 43734] gi|258603364|gb|EEW16629.1| chaperone protein ClpB [Corynebacterium jeikeium ATCC 43734] Length=878 Score = 1260 bits (3261), Expect = 0.0, Method: Compositional matrix adjust. Identities = 630/838 (76%), Positives = 726/838 (87%), Gaps = 2/838 (0%) Query 3 SFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATVRA 62 SFNPTT TQ+A+ AALQ AS GNP+IRPAHLL+ALL Q D IA P+L+A GVEP T+ Sbjct 3 SFNPTTMTQSAMQAALQDASAKGNPDIRPAHLLVALLEQEDSIALPVLQAAGVEPQTISV 62 Query 63 ETQRLLDRLPQATGAS-TQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDSD 121 + + L+ PQATG+ PQ +R++L A+T AQ+LA +L D YVSTE ++ G+A G+SD Sbjct 63 KAKNLVAGYPQATGSEMANPQFNRDALNALTAAQELAEQLGDTYVSTEVLLAGIAKGNSD 122 Query 122 VAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPVI 181 AK++ GA+ +A+R AF VRG+ +VT+ EPE +QAL+KYSTDLTARAREGK+DPVI Sbjct 123 AAKVMHDAGATFEAIRGAFESVRGNRKVTTEEPEGQFQALEKYSTDLTARAREGKIDPVI 182 Query 182 GRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVALD 241 GRD EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLA+RIVAGDVPESLR K +++LD Sbjct 183 GRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLRGKKLISLD 242 Query 242 LGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMIK 301 LGSMVAG+KYRGEFEERLKAVLD+IK + G++ITFIDELHTIVGAGA G+ AMDAGNMIK Sbjct 243 LGSMVAGAKYRGEFEERLKAVLDEIKEAEGEVITFIDELHTIVGAGAGGDSAMDAGNMIK 302 Query 302 PMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEVH 361 P+LARGELRLVGATTLDEYRK+IEKDAALERRFQQVYVGEPS EDTIGILRGLK+RYEVH Sbjct 303 PLLARGELRLVGATTLDEYRKYIEKDAALERRFQQVYVGEPSAEDTIGILRGLKERYEVH 362 Query 362 HGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLVR 421 HGVRI DSALVAAATLSDRYIT+RFLPDKAIDLVDEAASRLRMEIDSRP EID VER+VR Sbjct 363 HGVRIQDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPEEIDNVERVVR 422 Query 422 RLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQLE 481 RLEIEEMAL KE D AS +RL +LRSELAD+KEKLA LT RW+NEK +I+ +R+LKE+L+ Sbjct 423 RLEIEEMALEKETDAASKDRLERLRSELADEKEKLAGLTARWENEKGSIDSLRELKEELD 482 Query 482 ALRGESERAERDGDLAKAAELRYGRIPEVEKKL-DAALPQAQAREQVMLKEEVGPDDIAD 540 LR ESE AER+G+ AK AELRYG IP+VEKKL +A A+ +E +ML EEV PD IAD Sbjct 483 NLRRESEIAEREGNFAKVAELRYGHIPDVEKKLAEAEETVAEQQEGMMLTEEVTPDTIAD 542 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VVSAWTG+PAG++L+GET KLL ME LG RV+GQ AV AVSDAVRR+RAGV+DPNRPT Sbjct 543 VVSAWTGVPAGKMLQGETEKLLNMELVLGGRVVGQHRAVDAVSDAVRRARAGVADPNRPT 602 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 G+F+FLGPTGVGKTELAKALADFLFDDE AMVRIDMSEYGEKH+VARL+GAPPGYVGY+A Sbjct 603 GSFLFLGPTGVGKTELAKALADFLFDDETAMVRIDMSEYGEKHSVARLVGAPPGYVGYDA 662 Query 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 GGQLTEAVRRRPYTVVLFDE+EKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTILILTS Sbjct 663 GGQLTEAVRRRPYTVVLFDEVEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTS 722 Query 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 NLG+GG+ E+V+ AV+ FKPEFINRLDDVLIF+ L+ E+L IV IQ+ L +RLA RR Sbjct 723 NLGAGGTDEEVMEAVKRAFKPEFINRLDDVLIFDPLSAEQLKSIVSIQVGALAERLAARR 782 Query 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNV 838 L L V+ A+ WLA+ G+DP YGARPLRRL+Q+AIGDQLAK LLAG+V DGDTV V++ Sbjct 783 LILDVTDDAQSWLAEHGYDPAYGARPLRRLIQKAIGDQLAKKLLAGEVRDGDTVRVDI 840 >gi|336324863|ref|YP_004604829.1| ATP-dependent Clp protease [Corynebacterium resistens DSM 45100] gi|336100845|gb|AEI08665.1| ATP-dependent Clp protease [Corynebacterium resistens DSM 45100] Length=860 Score = 1259 bits (3258), Expect = 0.0, Method: Compositional matrix adjust. Identities = 630/845 (75%), Positives = 729/845 (87%), Gaps = 2/845 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 + +F PTTKTQ A+ AALQ+AS GNP+IRPAHLL+ALL Q+D IA P+L+A GVEP+ V Sbjct 1 MSNFTPTTKTQEAMQAALQSASAKGNPDIRPAHLLVALLEQDDSIALPVLQAAGVEPSAV 60 Query 61 RAETQRLLDRLPQATGAS-TQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGD 119 E + L+ PQATG++ PQ +R++L A+T AQ+LA EL D YVSTE +M G+A GD Sbjct 61 LTEARNLVAAYPQATGSNMANPQFNRDALNALTAAQELAGELGDTYVSTEVLMAGIAKGD 120 Query 120 SDVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDP 179 S+ A LL GAS A++ AF VRG+ +VT+ EPE +QAL+KYSTDLTARAR GK+DP Sbjct 121 SEAATLLNSKGASFDAIKTAFQSVRGNRKVTTEEPEGQFQALEKYSTDLTARARAGKIDP 180 Query 180 VIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVA 239 VIGRD EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLA+RIVAGDVPESLR K +++ Sbjct 181 VIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLRGKKLIS 240 Query 240 LDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNM 299 LDLGSMVAG+KYRGEFEERLKAVLD+IK + G++ITFIDELHTIVGAGA G+ AMDAGNM Sbjct 241 LDLGSMVAGAKYRGEFEERLKAVLDEIKEAEGEVITFIDELHTIVGAGAGGDSAMDAGNM 300 Query 300 IKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYE 359 IKP+LARGELRLVGATTLDEYR++IEKDAALERRFQQVYVGEP+VEDT+GILRGLK+RYE Sbjct 301 IKPLLARGELRLVGATTLDEYRQYIEKDAALERRFQQVYVGEPTVEDTVGILRGLKERYE 360 Query 360 VHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERL 419 VHHGVRI DSALVAAA+LSDRYIT+RFLPDKAIDLVDEAASRLRMEIDSRP EID VER+ Sbjct 361 VHHGVRIQDSALVAAASLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPEEIDNVERV 420 Query 420 VRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQ 479 VRRLEIEEMAL+KE D AS ERL +LRSELAD+KEKLA LT RW+NEK +I+ +R LKE+ Sbjct 421 VRRLEIEEMALAKETDAASKERLERLRSELADEKEKLAGLTARWENEKGSIDSLRALKEE 480 Query 480 LEALRGESERAERDGDLAKAAELRYGRIPEVEKKL-DAALPQAQAREQVMLKEEVGPDDI 538 L+ LR ESE AER+G+ AK AELRYGRIP+VEK+L +A A+ +E +ML EEV PD I Sbjct 481 LDNLRRESEIAEREGNFAKVAELRYGRIPDVEKQLAEAEETVAEQQEGMMLTEEVTPDTI 540 Query 539 ADVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNR 598 ADVVSAWTG+PAG++L+GET KLL ME L RV+GQ+ AV AVSDAVRRSRAGV+DPNR Sbjct 541 ADVVSAWTGVPAGKMLQGETEKLLNMELVLAGRVVGQEKAVDAVSDAVRRSRAGVADPNR 600 Query 599 PTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGY 658 PTG+F+FLGPTGVGKTELAK LA+FLFDDE AMVRIDMSEYGEKH+VARL+GAPPGYVGY Sbjct 601 PTGSFLFLGPTGVGKTELAKGLAEFLFDDETAMVRIDMSEYGEKHSVARLVGAPPGYVGY 660 Query 659 EAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILIL 718 +AGGQLTEAVRRRPYTVVLFDE+EKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTILIL Sbjct 661 DAGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILIL 720 Query 719 TSNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQ 778 TSNLG+GG+ E+V+ AV+ FKPEFINRLDDVLIF+ L+ E+L IV IQL LG+RLA Sbjct 721 TSNLGAGGTDEEVMEAVKRAFKPEFINRLDDVLIFDPLSEEQLESIVSIQLRGLGERLAA 780 Query 779 RRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNV 838 RRL L V+ AK+WLA+RG++P YGARPLRRL+Q+AIGDQLAK LL G++ DGDTV V+ Sbjct 781 RRLVLDVTDDAKKWLAERGYEPAYGARPLRRLIQKAIGDQLAKKLLGGEIRDGDTVRVDT 840 Query 839 SPDAD 843 D Sbjct 841 ETSDD 845 >gi|68535266|ref|YP_249971.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Corynebacterium jeikeium K411] gi|68262865|emb|CAI36353.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Corynebacterium jeikeium K411] Length=873 Score = 1259 bits (3257), Expect = 0.0, Method: Compositional matrix adjust. Identities = 630/838 (76%), Positives = 727/838 (87%), Gaps = 2/838 (0%) Query 3 SFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATVRA 62 SFNPTT TQ+A+ AALQ AS GNP+IRPAHLL+ALL Q D IA P+L+A GVEP T+ A Sbjct 3 SFNPTTMTQSAMQAALQDASAKGNPDIRPAHLLVALLEQEDSIALPVLQAAGVEPQTIAA 62 Query 63 ETQRLLDRLPQATGAS-TQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDSD 121 + + L+ PQATG+ PQ +R++L A+T AQ+LA +L D YVSTE ++ G+A G+SD Sbjct 63 KAKNLVAGYPQATGSEMANPQFNRDALNALTAAQELAEQLGDTYVSTEVLLAGIAKGNSD 122 Query 122 VAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPVI 181 AK++ GA+ +A+R AF VRG+ +VT+ EPE +QAL+KYSTDLTARAREGK+DPVI Sbjct 123 AAKVMHEAGATFEAIRGAFESVRGNRKVTTEEPEGQFQALEKYSTDLTARAREGKIDPVI 182 Query 182 GRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVALD 241 GRD EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLA+RIVAGDVPESLR K +++LD Sbjct 183 GRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLRGKKLISLD 242 Query 242 LGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMIK 301 LGSMVAG+KYRGEFEERLKAVLD+IK + G+++TFIDELHTIVGAGA G+ AMDAGNMIK Sbjct 243 LGSMVAGAKYRGEFEERLKAVLDEIKEAEGEVVTFIDELHTIVGAGAGGDSAMDAGNMIK 302 Query 302 PMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEVH 361 P+LARGELRLVGATTLDEYRK+IEKDAALERRFQQVYVGEP+ EDTIGILRGLK+RYEVH Sbjct 303 PLLARGELRLVGATTLDEYRKYIEKDAALERRFQQVYVGEPTAEDTIGILRGLKERYEVH 362 Query 362 HGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLVR 421 HGVRI DSALVAAATLSDRYIT+RFLPDKAIDLVDEAASRLRMEIDSRP EID VER+VR Sbjct 363 HGVRIQDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPEEIDNVERVVR 422 Query 422 RLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQLE 481 RLEIEEMAL KE D AS +RL +LRSELAD+KEKLA LT RW+NEK +I+ +R+LKE+L+ Sbjct 423 RLEIEEMALEKETDAASKDRLERLRSELADEKEKLAGLTARWENEKGSIDSLRELKEELD 482 Query 482 ALRGESERAERDGDLAKAAELRYGRIPEVEKKL-DAALPQAQAREQVMLKEEVGPDDIAD 540 LR ESE AER+GD AK AELRYG IP+VEKKL +A A+ +E +ML EEV PD IAD Sbjct 483 NLRRESEIAEREGDFAKVAELRYGHIPDVEKKLAEAEETVAEQQEGMMLTEEVTPDTIAD 542 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VVSAWTG+PAG++L+GET KLL ME LG RV+GQ AV AVSDAVRR+RAGV+DPNRPT Sbjct 543 VVSAWTGVPAGKMLQGETEKLLNMELVLGGRVVGQHRAVDAVSDAVRRARAGVADPNRPT 602 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 G+F+FLGPTGVGKTELAKALADFLFDDE AMVRIDMSEYGEKH+VARL+GAPPGYVGY+A Sbjct 603 GSFLFLGPTGVGKTELAKALADFLFDDETAMVRIDMSEYGEKHSVARLVGAPPGYVGYDA 662 Query 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 GGQLTEAVRRRPYTVVLFDE+EKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTILILTS Sbjct 663 GGQLTEAVRRRPYTVVLFDEVEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTS 722 Query 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 NLG+GG+ E+V+ AV+ FKPEFINRLDDVLIF+ L+ E+L IV IQ+ L +RLA RR Sbjct 723 NLGAGGTDEEVMEAVKRAFKPEFINRLDDVLIFDPLSAEQLKSIVSIQVGTLAERLAARR 782 Query 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNV 838 L L V+ A+ WLA+ G+DP YGARPLRRL+Q+AIGDQLAK LLAG+V DGDTV V++ Sbjct 783 LILDVTDDAQSWLAEHGYDPAYGARPLRRLIQKAIGDQLAKKLLAGEVRDGDTVRVDI 840 >gi|213965100|ref|ZP_03393298.1| ATP-dependent chaperone ClpB [Corynebacterium amycolatum SK46] gi|213952214|gb|EEB63598.1| ATP-dependent chaperone ClpB [Corynebacterium amycolatum SK46] Length=859 Score = 1258 bits (3255), Expect = 0.0, Method: Compositional matrix adjust. Identities = 629/845 (75%), Positives = 727/845 (87%), Gaps = 2/845 (0%) Query 3 SFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATVRA 62 SF PTTKT L A++AA++AGNP+IRP H+L+ALL Q +GIAAPLLEA GV P+ V Sbjct 2 SFTPTTKTGEVLQEAMKAATSAGNPDIRPGHILVALLEQKEGIAAPLLEAAGVNPSGVLT 61 Query 63 ETQRLLDRLPQATGAS-TQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDSD 121 + L+ P A+GA+ PQ +R+++ A+ A++LA EL DEYVSTE +++G+ATG S+ Sbjct 62 RAKELVAGYPSASGANMANPQFNRDAVNALNAAEELAGELGDEYVSTEILLIGVATGQSE 121 Query 122 VAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPVI 181 A +L GA+ +AL+ A VRGS +VT+ PE YQAL+KY+TDLTARAREGK+DPVI Sbjct 122 AATVLQSAGATAEALKGALTSVRGSRKVTTENPEEQYQALEKYATDLTARAREGKIDPVI 181 Query 182 GRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVALD 241 GRD EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLA+RIVAGDVPESL+ KT+++LD Sbjct 182 GRDAEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLMSLD 241 Query 242 LGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMIK 301 LGSMVAG+KYRGEFEERLKAVLD+IK S GQIITFIDE+HTIVGAGATG+G+MDAGNMIK Sbjct 242 LGSMVAGAKYRGEFEERLKAVLDEIKESDGQIITFIDEIHTIVGAGATGDGSMDAGNMIK 301 Query 302 PMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEVH 361 PMLARGELRLVGATTLDEYRK+IEKDAALERRFQQV+VGEPSVED IGILRGLK+RYEVH Sbjct 302 PMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDAIGILRGLKERYEVH 361 Query 362 HGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLVR 421 HGVRI DSALVAAATLSDRYIT+RFLPDKAIDLVDEAASRLRMEIDS P EID ER+VR Sbjct 362 HGVRIQDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSSPEEIDSAERIVR 421 Query 422 RLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQLE 481 RLEIEEMAL KE D AS ERL KLR ELAD++EKL L TRWQNEK++I+ VR ++E+L+ Sbjct 422 RLEIEEMALEKETDIASKERLDKLREELADEREKLNALKTRWQNEKSSIDDVRSVREELD 481 Query 482 ALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQ-AQAREQVMLKEEVGPDDIAD 540 ALR ESE+AER+GD + AELRYGRIPE+EKKL+AA A A E MLKEEV P ++A+ Sbjct 482 ALRTESEKAEREGDYGRVAELRYGRIPELEKKLEAAEESVADAEENSMLKEEVTPQEVAE 541 Query 541 VVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPT 600 VVSAWTGIPAG++++GET KLL ME LG+RV+GQ AAV AVSDAVRRSRAGV+DPNRPT Sbjct 542 VVSAWTGIPAGKMMQGETEKLLEMELNLGRRVVGQNAAVEAVSDAVRRSRAGVADPNRPT 601 Query 601 GAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEA 660 G+F+FLGPTGVGKTELAKALA+FLFDDERAMVRIDMSEYGEKH+VARLIGAPPGYVGY+A Sbjct 602 GSFLFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLIGAPPGYVGYDA 661 Query 661 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS 720 GGQLTEAVRRRPYTVVLFDE+EKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNTILILTS Sbjct 662 GGQLTEAVRRRPYTVVLFDEVEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTS 721 Query 721 NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRR 780 NLG+GG+ EQ++ AV+ FKPEFINRLDDV+IF+ L E+L IVDIQ+ L +RL RR Sbjct 722 NLGAGGTHEQIMDAVKMAFKPEFINRLDDVVIFDPLTSEQLRGIVDIQVRNLAERLEARR 781 Query 781 LQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSP 840 L L V+ A WL++RG+DP YGARPLRRLVQ+AIGD+LA+ LLAG V DGD V V V+ Sbjct 782 LVLDVADGALDWLSERGYDPAYGARPLRRLVQKAIGDELARRLLAGDVRDGDRVEVTVAD 841 Query 841 DADSL 845 D +SL Sbjct 842 DGESL 846 >gi|334697684|gb|AEG82481.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium ulcerans 809] Length=849 Score = 1257 bits (3253), Expect = 0.0, Method: Compositional matrix adjust. Identities = 627/848 (74%), Positives = 724/848 (86%), Gaps = 3/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 ++SFNPTTKTQ AL ALQ AS+ GNP+IRPAHLL A+L Q DGIA P+L A GV+P V Sbjct 1 MNSFNPTTKTQEALQVALQQASSLGNPDIRPAHLLAAILGQEDGIAVPVLRATGVDPQVV 60 Query 61 RAETQRLLDRLPQATGAS-TQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGD 119 E L+ P+A G+ P +RE+L A+T AQ+LA EL DEYVSTE ++ +A G Sbjct 61 AQEANALVAGYPKAEGSGMANPNFNREALNALTAAQELAGELGDEYVSTEVLLAAIARGK 120 Query 120 SDVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDP 179 SD A+LLT GA+ ++ F VRGS +VTS +PE +QAL+KYSTDLTARAREGK+DP Sbjct 121 SDAAELLTKRGATYDVIKGVFPSVRGSKKVTSQDPEGQFQALEKYSTDLTARAREGKIDP 180 Query 180 VIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVA 239 VIGRD+EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLA+RIVAGDVPESL+ KT+++ Sbjct 181 VIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLIS 240 Query 240 LDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNM 299 LDLGSMVAG+KYRGEFEERLKAVLD+IK + G++ITFIDELHTIVGAGATG+ AMDAGNM Sbjct 241 LDLGSMVAGAKYRGEFEERLKAVLDEIKAAEGEVITFIDELHTIVGAGATGDSAMDAGNM 300 Query 300 IKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYE 359 IKP+LARGELRLVGATTLDEYRK+IEKDAALERRFQQV+VGEPSVED IGILRGLK+RYE Sbjct 301 IKPLLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDAIGILRGLKERYE 360 Query 360 VHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERL 419 VHHGVRI DSALVAAATLSDRYIT+RFLPDKAIDLVDEAASRLRMEIDS P EIDE+ER+ Sbjct 361 VHHGVRIQDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERI 420 Query 420 VRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQ 479 VRRLEIEE+AL KE D AS +RL KLR ELAD++EKL EL RW NEK+AI+ VR+ KE+ Sbjct 421 VRRLEIEEVALGKETDVASQQRLEKLRQELADEREKLGELKARWNNEKSAIDKVREAKEE 480 Query 480 LEALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIA 539 LE LR ESE AER+GD K AELRYGRIPE+EK++ A ++ + ML EEV PD IA Sbjct 481 LEHLRSESEIAEREGDYGKVAELRYGRIPELEKQVAEA--ESHTTDTTMLSEEVTPDTIA 538 Query 540 DVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRP 599 DVVSAWTGIPAG++L+GET KLL ME ELG RV+GQ AV AVSDAVRR+RAGV+DPNRP Sbjct 539 DVVSAWTGIPAGKMLQGETEKLLHMESELGNRVVGQLEAVEAVSDAVRRARAGVADPNRP 598 Query 600 TGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYE 659 TG+F+FLGPTGVGKTELAKALA+F+FDDERAMVRIDMSEYGEKH+VARL+GAPPGYVGY+ Sbjct 599 TGSFLFLGPTGVGKTELAKALAEFMFDDERAMVRIDMSEYGEKHSVARLVGAPPGYVGYD 658 Query 660 AGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILT 719 GGQLTEAVRRRPYTVVLFDE+EKAH DVFD+LLQVLDEGRLTDG GRTVDFRNT+LILT Sbjct 659 QGGQLTEAVRRRPYTVVLFDEVEKAHSDVFDILLQVLDEGRLTDGQGRTVDFRNTVLILT 718 Query 720 SNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQR 779 SNLG+GG+ EQ++ AV+ FKPEF+NRLDDV+IF+ L+ E+L IVDIQ+AQL RL+ R Sbjct 719 SNLGAGGTREQMMDAVKRAFKPEFVNRLDDVVIFDPLSEEQLTHIVDIQIAQLADRLSAR 778 Query 780 RLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVS 839 RL L VS AK WLA+RG++P YGARPLRRL+QQAIGDQLAK LLAG++ DGDTV V+V+ Sbjct 779 RLTLNVSDAAKLWLAERGYEPAYGARPLRRLIQQAIGDQLAKKLLAGEIRDGDTVHVDVA 838 Query 840 PDADSLIL 847 +L L Sbjct 839 DGGGALEL 846 >gi|25029169|ref|NP_739223.1| putative endopeptidase Clp ATP-binding chain B [Corynebacterium efficiens YS-314] gi|54035859|sp|Q8FM94.1|CLPB_COREF RecName: Full=Chaperone protein ClpB gi|23494457|dbj|BAC19423.1| putative endopeptidase Clp ATP-binding chain B [Corynebacterium efficiens YS-314] Length=852 Score = 1256 bits (3250), Expect = 0.0, Method: Compositional matrix adjust. Identities = 618/840 (74%), Positives = 727/840 (87%), Gaps = 1/840 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 + SFNPTTKT A+ AALQ AS GNP+IRPAHLL+A+L Q DG+AAP+L A GV+P T+ Sbjct 1 MSSFNPTTKTSEAMQAALQQASANGNPDIRPAHLLVAILDQADGVAAPVLTAAGVDPKTI 60 Query 61 RAETQRLLDRLPQATGAS-TQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGD 119 AE Q+L+D P+A+G++ P +R++L A+T +Q+LA EL DEYVSTE ++ G+A G Sbjct 61 LAEAQKLVDGYPKASGSNLANPNFNRDALNALTASQELAGELGDEYVSTEVLLAGIARGK 120 Query 120 SDVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDP 179 SD A LL G GA+ A++ AF VRGS +VTS +PE +QAL+KYSTDLT AREGK+DP Sbjct 121 SDAADLLKGKGATYDAIKAAFQSVRGSQKVTSQDPEGQFQALEKYSTDLTKLAREGKIDP 180 Query 180 VIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVA 239 VIGRD EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLA+RIVAGDVPESL+ KT+++ Sbjct 181 VIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLIS 240 Query 240 LDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNM 299 LDLGSMVAG+KYRGEFEERLKAVLD+IK + G+I+TFIDELHTIVGAGA+GE AMDAGNM Sbjct 241 LDLGSMVAGAKYRGEFEERLKAVLDEIKGANGEIVTFIDELHTIVGAGASGESAMDAGNM 300 Query 300 IKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYE 359 IKP+LARGELRLVGATTL+EYRK+IEKD ALERRFQQVYVGEPSVEDT+GILRGLK+RYE Sbjct 301 IKPLLARGELRLVGATTLNEYRKYIEKDTALERRFQQVYVGEPSVEDTVGILRGLKERYE 360 Query 360 VHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERL 419 VHHGVRI DSALVAAA LS RYIT+RFLPDKAIDLVDEAASRLRMEIDS P EIDE+ER+ Sbjct 361 VHHGVRIQDSALVAAAELSHRYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERI 420 Query 420 VRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQ 479 VRRLEIEE+AL+KE D AS ERL +LRSELAD++EKL+EL RWQNEK I+ VR KE+ Sbjct 421 VRRLEIEEVALTKETDVASRERLERLRSELADEREKLSELKARWQNEKAVIDDVRKFKEE 480 Query 480 LEALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIA 539 LEALR ES+ AER+GD + AELRYGRIPE+EKK+ A + + ML EEV P+ IA Sbjct 481 LEALRSESDIAEREGDYGRVAELRYGRIPELEKKIAEAEEKIGGADNSMLTEEVTPEVIA 540 Query 540 DVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRP 599 +VVSAWTGIPAG++++GET KLL ME LGKRV+GQ AVTAVSDAVRRSRAGV+DPNRP Sbjct 541 EVVSAWTGIPAGKMMQGETEKLLNMERFLGKRVVGQHEAVTAVSDAVRRSRAGVADPNRP 600 Query 600 TGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYE 659 TG+F+FLGPTGVGKTELAKA+++FLFDDERAMVRIDMSEY EKH+VARL+GAPPGYVGY+ Sbjct 601 TGSFLFLGPTGVGKTELAKAVSEFLFDDERAMVRIDMSEYSEKHSVARLVGAPPGYVGYD 660 Query 660 AGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILT 719 GGQLTEAVRRRPYT VLFDE+EKAHPDVFD+LLQVLD+GRLTDG GRTVDFRNTILILT Sbjct 661 QGGQLTEAVRRRPYTTVLFDEVEKAHPDVFDILLQVLDDGRLTDGQGRTVDFRNTILILT 720 Query 720 SNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQR 779 SNLG+GG+ EQ++ AV+ FKPEFINRLDD+++F+ L+ E+L IV+IQ++QL +RL+ R Sbjct 721 SNLGAGGTREQMMDAVKMAFKPEFINRLDDIVVFDPLSQEQLASIVEIQISQLAERLSDR 780 Query 780 RLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVS 839 RL L+VS AK WLA+RG+DP YGARPLRRL+QQAIGDQLAK LLAG++ DGD V V+V+ Sbjct 781 RLTLRVSDAAKLWLAERGYDPAYGARPLRRLIQQAIGDQLAKELLAGEIRDGDRVLVDVA 840 >gi|227834132|ref|YP_002835839.1| ATP-dependent Clp protease, ATP-binding subunit [Corynebacterium aurimucosum ATCC 700975] gi|262183381|ref|ZP_06042802.1| ATP-dependent Clp protease, ATP-binding subunit [Corynebacterium aurimucosum ATCC 700975] gi|227455148|gb|ACP33901.1| ATP-dependent Clp protease, ATP-binding subunit [Corynebacterium aurimucosum ATCC 700975] Length=853 Score = 1256 bits (3249), Expect = 0.0, Method: Compositional matrix adjust. Identities = 630/848 (75%), Positives = 724/848 (86%), Gaps = 1/848 (0%) Query 1 VDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60 + SFNPTTKTQ AL ALQ AS GNP+IRPAHLL A+L Q DGIAAP+L+A GV+P TV Sbjct 1 MSSFNPTTKTQEALQQALQTASANGNPDIRPAHLLAAILEQQDGIAAPVLKATGVDPDTV 60 Query 61 RAETQRLLDRLPQATGAS-TQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGD 119 E ++L+D LP+A GA+ P +R++L +T AQ+LA EL DEYVSTE ++ +A Sbjct 61 LKEARQLIDALPKAEGANMANPNFNRDALNVLTRAQELAGELGDEYVSTEVLLAAIAGSK 120 Query 120 SDVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDP 179 +D A+LLT GA+ AL+ AF VRG+ARVTS PE +Q L+KY+TDLTARAREGK+DP Sbjct 121 TDAAELLTSRGATYDALKGAFPSVRGAARVTSENPEEQFQTLEKYATDLTARAREGKIDP 180 Query 180 VIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVA 239 VIGRD EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLA+RIVAGDVPESL+ KT+++ Sbjct 181 VIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLLS 240 Query 240 LDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNM 299 LDLGSMVAG+KYRGEFEERLKAVLD+IK S GQIITFIDELHTIVGAGATGEG+MDAGNM Sbjct 241 LDLGSMVAGAKYRGEFEERLKAVLDEIKASDGQIITFIDELHTIVGAGATGEGSMDAGNM 300 Query 300 IKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYE 359 IKPMLARGELRLVGATTLDEYRK+IEKDAALERRFQQVY EPSVEDTIGILRGLK+RYE Sbjct 301 IKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVYAAEPSVEDTIGILRGLKERYE 360 Query 360 VHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERL 419 VHHGVRI DSALV+AA LS RYIT RFLPDKAIDLVDEA SRLRMEIDS P EIDE+ER+ Sbjct 361 VHHGVRIQDSALVSAAELSHRYITNRFLPDKAIDLVDEAGSRLRMEIDSSPQEIDELERI 420 Query 420 VRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQ 479 VRRLEIEE+AL KE D AS +RL L+ ELAD++EKL EL RW NEK AI+ V+ +KEQ Sbjct 421 VRRLEIEELALKKESDAASKDRLTALQQELADEREKLGELKARWANEKKAIDDVQTIKEQ 480 Query 480 LEALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIA 539 LE LR ++E AERDGDLA A+E+ YG++P +EK L AA +AQ + ML EEV PD IA Sbjct 481 LEDLRRQAEIAERDGDLALASEINYGKMPPLEKDLAAAEEKAQQQHNTMLSEEVTPDTIA 540 Query 540 DVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRP 599 +VVSAWTGIPAG++L+GET KLL ME LG+RV+GQK AVTAVSDAVRR+RAGV+DPNRP Sbjct 541 EVVSAWTGIPAGKMLQGETEKLLNMESVLGQRVVGQKEAVTAVSDAVRRARAGVADPNRP 600 Query 600 TGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYE 659 TG+F+FLGPTGVGKTELAKALADFLFDDE AMVRIDMSE+GEKH+VARL+GAPPGYVGY+ Sbjct 601 TGSFLFLGPTGVGKTELAKALADFLFDDESAMVRIDMSEFGEKHSVARLVGAPPGYVGYD 660 Query 660 AGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILT 719 AGGQLTEAVRRRPYT+VLFDE+EKAHPDVFDVLLQVLDEGRLTDG GRTVDFRNT++ILT Sbjct 661 AGGQLTEAVRRRPYTLVLFDEVEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTVIILT 720 Query 720 SNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQR 779 SNLG+GG+ E+V+ AV+ +FKPEFINRLDDV++FE L + L IVDIQL L +RL+ R Sbjct 721 SNLGAGGTKEEVMEAVKRSFKPEFINRLDDVVMFEPLTSDLLSGIVDIQLKGLAERLSGR 780 Query 780 RLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVS 839 RL LQVS AK WLA+RG+DP YGARPLRRL+QQAIGDQLAK LLAG + DGDTV V+V+ Sbjct 781 RLTLQVSDAAKLWLAERGYDPAYGARPLRRLIQQAIGDQLAKKLLAGDIVDGDTVHVDVA 840 Query 840 PDADSLIL 847 + L L Sbjct 841 DGGERLEL 848 Lambda K H 0.316 0.134 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2062512043194 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40