BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0392c
Length=470
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607533|ref|NP_214906.1| membrane NADH dehydrogenase [Mycoba... 959 0.0
gi|31791568|ref|NP_854061.1| membrane NADH dehydrogenase [Mycoba... 956 0.0
gi|289441770|ref|ZP_06431514.1| membrane NADH dehydrogenase ndhA... 956 0.0
gi|308395349|ref|ZP_07491986.2| membrane NADH dehydrogenase ndhA... 924 0.0
gi|183980712|ref|YP_001849003.1| NADH dehydrogenase Ndh_1 [Mycob... 816 0.0
gi|254818883|ref|ZP_05223884.1| DoxD family protein/pyridine nuc... 776 0.0
gi|240168857|ref|ZP_04747516.1| NADH dehydrogenase Ndh_1 [Mycoba... 763 0.0
gi|342859125|ref|ZP_08715779.1| hypothetical protein MCOL_09613 ... 744 0.0
gi|41409972|ref|NP_962808.1| hypothetical protein MAP3874c [Myco... 740 0.0
gi|118464827|ref|YP_883899.1| DoxD family protein/pyridine nucle... 739 0.0
gi|296167852|ref|ZP_06850035.1| NADH dehydrogenase [Mycobacteriu... 729 0.0
gi|289760505|ref|ZP_06519883.1| membrane NADH dehydrogenase ndhA... 729 0.0
gi|336460386|gb|EGO39286.1| NADH dehydrogenase, FAD-containing s... 714 0.0
gi|289445929|ref|ZP_06435673.1| membrane NADH dehydrogenase ndhA... 686 0.0
gi|54024511|ref|YP_118753.1| putative NADH dehydrogenase [Nocard... 643 0.0
gi|296140013|ref|YP_003647256.1| FAD-dependent pyridine nucleoti... 633 2e-179
gi|118469404|ref|YP_887924.1| NADH dehydrogenase [Mycobacterium ... 616 3e-174
gi|262202653|ref|YP_003273861.1| NADH dehydrogenase (ubiquinone)... 613 3e-173
gi|120404057|ref|YP_953886.1| FAD-dependent pyridine nucleotide-... 611 7e-173
gi|343928485|ref|ZP_08767933.1| NADH dehydrogenase [Gordonia alk... 605 4e-171
gi|108799767|ref|YP_639964.1| NADH dehydrogenase [Mycobacterium ... 605 6e-171
gi|226366452|ref|YP_002784235.1| NADH dehydrogenase [Rhodococcus... 604 9e-171
gi|229493549|ref|ZP_04387334.1| NADH dehydrogenase [Rhodococcus ... 604 1e-170
gi|126435408|ref|YP_001071099.1| NADH dehydrogenase [Mycobacteri... 603 2e-170
gi|226306598|ref|YP_002766558.1| NADH dehydrogenase [Rhodococcus... 603 2e-170
gi|145223934|ref|YP_001134612.1| FAD-dependent pyridine nucleoti... 602 3e-170
gi|312139795|ref|YP_004007131.1| NADH dehydrogenase [Rhodococcus... 601 8e-170
gi|326384950|ref|ZP_08206624.1| NADH dehydrogenase (ubiquinone) ... 601 9e-170
gi|333990583|ref|YP_004523197.1| NADH dehydrogenase Ndh [Mycobac... 598 7e-169
gi|169629515|ref|YP_001703164.1| NADH dehydrogenase (NDH) [Mycob... 597 2e-168
gi|41407659|ref|NP_960495.1| hypothetical protein MAP1561c [Myco... 590 2e-166
gi|111024206|ref|YP_707178.1| NADH dehydrogenase [Rhodococcus jo... 590 2e-166
gi|118618416|ref|YP_906748.1| NADH dehydrogenase Ndh [Mycobacter... 589 4e-166
gi|15608991|ref|NP_216370.1| NADH dehydrogenase [Mycobacterium t... 589 4e-166
gi|289574536|ref|ZP_06454763.1| NADH dehydrogenase ndh [Mycobact... 588 5e-166
gi|326903456|gb|EGE50389.1| NADH dehydrogenase ndh [Mycobacteriu... 588 6e-166
gi|340626862|ref|YP_004745314.1| putative NADH dehydrogenase NDH... 588 6e-166
gi|254775343|ref|ZP_05216859.1| DoxD family protein/pyridine nuc... 588 7e-166
gi|31793044|ref|NP_855537.1| NADH dehydrogenase [Mycobacterium b... 587 1e-165
gi|306779853|ref|ZP_07418190.1| NADH dehydrogenase ndh [Mycobact... 587 2e-165
gi|121637757|ref|YP_977980.1| putative NADH dehydrogenase ndh [M... 586 4e-165
gi|342861249|ref|ZP_08717897.1| DoxD family protein/pyridine nuc... 585 4e-165
gi|240172037|ref|ZP_04750696.1| DoxD family protein/pyridine nuc... 584 9e-165
gi|254821981|ref|ZP_05226982.1| DoxD family protein/pyridine nuc... 584 1e-164
gi|306784596|ref|ZP_07422918.1| NADH dehydrogenase ndh [Mycobact... 582 3e-164
gi|167970333|ref|ZP_02552610.1| NADH dehydrogenase ndh [Mycobact... 578 8e-163
gi|15828111|ref|NP_302374.1| dehydrogenase [Mycobacterium leprae... 574 1e-161
gi|296164844|ref|ZP_06847402.1| NADH dehydrogenase [Mycobacteriu... 574 1e-161
gi|333920782|ref|YP_004494363.1| NADH dehydrogenase [Amycolicico... 572 5e-161
gi|226359938|ref|YP_002777716.1| NADH dehydrogenase [Rhodococcus... 564 1e-158
>gi|15607533|ref|NP_214906.1| membrane NADH dehydrogenase [Mycobacterium tuberculosis H37Rv]
gi|15839774|ref|NP_334811.1| NADH dehydrogenase [Mycobacterium tuberculosis CDC1551]
gi|148660157|ref|YP_001281680.1| membrane NADH dehydrogenase NdhA [Mycobacterium tuberculosis
H37Ra]
57 more sequence titles
Length=470
Score = 959 bits (2478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/470 (100%), Positives = 470/470 (100%), Gaps = 0/470 (0%)
Query 1 MTLSSGEPSAVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVAT 60
MTLSSGEPSAVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVAT
Sbjct 1 MTLSSGEPSAVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVAT 60
Query 61 GILSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAG 120
GILSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAG
Sbjct 61 GILSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAG 120
Query 121 AQQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGP 180
AQQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGP
Sbjct 121 AQQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGP 180
Query 181 TGVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMD 240
TGVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMD
Sbjct 181 TGVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMD 240
Query 241 VEVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDR 300
VEVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDR
Sbjct 241 VEVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDR 300
Query 301 AGRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPAN 360
AGRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPAN
Sbjct 301 AGRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPAN 360
Query 361 RKPFHYFNKGSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWG 420
RKPFHYFNKGSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWG
Sbjct 361 RKPFHYFNKGSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWG 420
Query 421 ISFMGRARGQMAITSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEAAG 470
ISFMGRARGQMAITSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEAAG
Sbjct 421 ISFMGRARGQMAITSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEAAG 470
>gi|31791568|ref|NP_854061.1| membrane NADH dehydrogenase [Mycobacterium bovis AF2122/97]
gi|121636304|ref|YP_976527.1| putative membrane NADH dehydrogenase ndhA [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224988776|ref|YP_002643463.1| putative membrane NADH dehydrogenase [Mycobacterium bovis BCG
str. Tokyo 172]
gi|31617154|emb|CAD93261.1| PROBABLE MEMBRANE NADH DEHYDROGENASE NDHA [Mycobacterium bovis
AF2122/97]
gi|121491951|emb|CAL70414.1| Probable membrane nadh dehydrogenase ndhA [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224771889|dbj|BAH24695.1| putative membrane NADH dehydrogenase [Mycobacterium bovis BCG
str. Tokyo 172]
gi|341600320|emb|CCC62990.1| probable membrane nadh dehydrogenase ndhA [Mycobacterium bovis
BCG str. Moreau RDJ]
Length=470
Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/470 (99%), Positives = 469/470 (99%), Gaps = 0/470 (0%)
Query 1 MTLSSGEPSAVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVAT 60
MTLSSGEPSAVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVAT
Sbjct 1 MTLSSGEPSAVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVAT 60
Query 61 GILSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAG 120
GILSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAG
Sbjct 61 GILSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAG 120
Query 121 AQQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGP 180
AQQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGP
Sbjct 121 AQQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGP 180
Query 181 TGVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMD 240
TGVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMD
Sbjct 181 TGVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMD 240
Query 241 VEVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDR 300
EVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDR
Sbjct 241 AEVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDR 300
Query 301 AGRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPAN 360
AGRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPAN
Sbjct 301 AGRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPAN 360
Query 361 RKPFHYFNKGSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWG 420
RKPFHYFNKGSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWG
Sbjct 361 RKPFHYFNKGSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWG 420
Query 421 ISFMGRARGQMAITSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEAAG 470
ISFMGRARGQMAITSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEAAG
Sbjct 421 ISFMGRARGQMAITSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEAAG 470
>gi|289441770|ref|ZP_06431514.1| membrane NADH dehydrogenase ndhA [Mycobacterium tuberculosis
T46]
gi|289568304|ref|ZP_06448531.1| membrane NADH dehydrogenase ndhA [Mycobacterium tuberculosis
T17]
gi|289748878|ref|ZP_06508256.1| membrane NADH dehydrogenase ndhA [Mycobacterium tuberculosis
T92]
gi|289752421|ref|ZP_06511799.1| membrane NADH dehydrogenase ndhA [Mycobacterium tuberculosis
EAS054]
gi|289414689|gb|EFD11929.1| membrane NADH dehydrogenase ndhA [Mycobacterium tuberculosis
T46]
gi|289542057|gb|EFD45706.1| membrane NADH dehydrogenase ndhA [Mycobacterium tuberculosis
T17]
gi|289689465|gb|EFD56894.1| membrane NADH dehydrogenase ndhA [Mycobacterium tuberculosis
T92]
gi|289693008|gb|EFD60437.1| membrane NADH dehydrogenase ndhA [Mycobacterium tuberculosis
EAS054]
Length=470
Score = 956 bits (2470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/470 (99%), Positives = 469/470 (99%), Gaps = 0/470 (0%)
Query 1 MTLSSGEPSAVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVAT 60
MTLSSGEPSAVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVAT
Sbjct 1 MTLSSGEPSAVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVAT 60
Query 61 GILSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAG 120
GILSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAG
Sbjct 61 GILSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAG 120
Query 121 AQQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGP 180
AQQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGP
Sbjct 121 AQQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGP 180
Query 181 TGVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMD 240
TGVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMD
Sbjct 181 TGVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMD 240
Query 241 VEVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDR 300
VEVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDR
Sbjct 241 VEVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDR 300
Query 301 AGRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPAN 360
AGRVIVEPDLTVKGHPNVFVVGDL FVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPAN
Sbjct 301 AGRVIVEPDLTVKGHPNVFVVGDLTFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPAN 360
Query 361 RKPFHYFNKGSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWG 420
RKPFHYFNKGSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWG
Sbjct 361 RKPFHYFNKGSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWG 420
Query 421 ISFMGRARGQMAITSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEAAG 470
ISFMGRARGQMAITSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEAAG
Sbjct 421 ISFMGRARGQMAITSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEAAG 470
>gi|308395349|ref|ZP_07491986.2| membrane NADH dehydrogenase ndhA [Mycobacterium tuberculosis
SUMu012]
gi|308367408|gb|EFP56259.1| membrane NADH dehydrogenase ndhA [Mycobacterium tuberculosis
SUMu012]
gi|339293445|gb|AEJ45556.1| membrane NADH dehydrogenase [Mycobacterium tuberculosis CCDC5079]
gi|339297089|gb|AEJ49199.1| membrane NADH dehydrogenase [Mycobacterium tuberculosis CCDC5180]
Length=454
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/454 (99%), Positives = 454/454 (100%), Gaps = 0/454 (0%)
Query 17 VVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTRLIL 76
+VIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTRLIL
Sbjct 1 MVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTRLIL 60
Query 77 RRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFATFAP 136
RRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFATFAP
Sbjct 61 RRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFATFAP 120
Query 137 GMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELAERT 196
GMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELAERT
Sbjct 121 GMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELAERT 180
Query 197 LAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVDYKG 256
LAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVDYKG
Sbjct 181 LAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVDYKG 240
Query 257 ITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVKGHP 316
ITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVKGHP
Sbjct 241 ITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVKGHP 300
Query 317 NVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMATIS 376
NVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMATIS
Sbjct 301 NVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMATIS 360
Query 377 RHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAITSQ 436
RHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAITSQ
Sbjct 361 RHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAITSQ 420
Query 437 MIYARLVMTLMEQQAQGALAAAEQAEHAEQEAAG 470
MIYARLVMTLMEQQAQGALAAAEQAEHAEQEAAG
Sbjct 421 MIYARLVMTLMEQQAQGALAAAEQAEHAEQEAAG 454
>gi|183980712|ref|YP_001849003.1| NADH dehydrogenase Ndh_1 [Mycobacterium marinum M]
gi|183174038|gb|ACC39148.1| NADH dehydrogenase Ndh_1 [Mycobacterium marinum M]
Length=471
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/471 (85%), Positives = 432/471 (92%), Gaps = 1/471 (0%)
Query 1 MTLSSGEPSAVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVAT 60
MT S E SA G RH VVIIGSGFGGL+AA+ALKRADVDITLISKTTTHLFQPLLYQVAT
Sbjct 1 MTPPSSESSAAGRRHHVVIIGSGFGGLSAARALKRADVDITLISKTTTHLFQPLLYQVAT 60
Query 61 GILSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAG 120
GILSEGDIAPTTRLILRRQKNVRVLLGEV IDL AQTVTSKLMDMTTV+PYDSLIVAAG
Sbjct 61 GILSEGDIAPTTRLILRRQKNVRVLLGEVMGIDLNAQTVTSKLMDMTTVSPYDSLIVAAG 120
Query 121 AQQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGP 180
AQQSYFGND+FA FAPGMKTIDDALELRGRILGAFEAAEV+TDH ERERRLTFVVVGAGP
Sbjct 121 AQQSYFGNDDFAIFAPGMKTIDDALELRGRILGAFEAAEVATDHDERERRLTFVVVGAGP 180
Query 181 TGVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMD 240
TGVE+AG+IV+LAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQ++LEKMD
Sbjct 181 TGVELAGEIVQLAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQKKLEKMD 240
Query 241 VEVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDR 300
VE+QLNAMVTAVDYKGIT+K+KDG ERRI+CACKVWAAGV ASPLGKMIAE SDGTE DR
Sbjct 241 VEIQLNAMVTAVDYKGITVKDKDGTERRIDCACKVWAAGVQASPLGKMIAEQSDGTETDR 300
Query 301 AGRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPAN 360
AGRVIVEPDLTVKGHP+VFV+GDLM VPGVPG+AQGAIQGA YAT IK VKG+DDPAN
Sbjct 301 AGRVIVEPDLTVKGHPHVFVIGDLMSVPGVPGMAQGAIQGAHYATKTIKQAVKGHDDPAN 360
Query 361 RKPFHYFNKGSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWG 420
RKPF YFNKGSMA IS +SAVA+VGK+EFAG+ AWLAWL LHL+YLVG+RNR+AA F+WG
Sbjct 361 RKPFQYFNKGSMALISHYSAVAKVGKVEFAGFIAWLAWLFLHLLYLVGHRNRVAAAFSWG 420
Query 421 ISFMGRARGQMAITSQMIYARLVMTLMEQQA-QGALAAAEQAEHAEQEAAG 470
++F+GR RGQMAITSQM+YARL M ++ +A + AL+AAE AE AEQ A G
Sbjct 421 LAFLGRTRGQMAITSQMVYARLAMRYLQARAEEDALSAAEHAEQAEQRATG 471
>gi|254818883|ref|ZP_05223884.1| DoxD family protein/pyridine nucleotide-disulfide oxidoreductase
[Mycobacterium intracellulare ATCC 13950]
Length=464
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/462 (85%), Positives = 427/462 (93%), Gaps = 5/462 (1%)
Query 14 RHRVVIIGSGFGGLNAAKALKRA----DVDITLISKTTTHLFQPLLYQVATGILSEGDIA 69
RHRVVIIGSGFGGL AAKALKRA +V++T+ISKTTTHLFQPLLYQVATGILSEGDIA
Sbjct 3 RHRVVIIGSGFGGLTAAKALKRAPKGTEVEVTVISKTTTHLFQPLLYQVATGILSEGDIA 62
Query 70 PTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGND 129
PTTRLILRRQ+NVRVL GEV+AIDL A+TVTS LM M TVTPYDSLIVAAGAQQSYFG+D
Sbjct 63 PTTRLILRRQRNVRVLWGEVSAIDLTAKTVTSHLMGMETVTPYDSLIVAAGAQQSYFGHD 122
Query 130 EFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQI 189
E+A FAPGMK+IDDALELRGRILGAFEAAEV+TD AER+RRLTFVVVGAGPTGVE+AG+I
Sbjct 123 EYAAFAPGMKSIDDALELRGRILGAFEAAEVATDPAERKRRLTFVVVGAGPTGVELAGEI 182
Query 190 VELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMV 249
V+LAERTLAGAFRTITPSECRVILLDAAPAVLPPMG KLGLKAQRRLEKMDVEVQLNAMV
Sbjct 183 VQLAERTLAGAFRTITPSECRVILLDAAPAVLPPMGTKLGLKAQRRLEKMDVEVQLNAMV 242
Query 250 TAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPD 309
TAVDY GITIKEKDGGERRIECACKVWAAGV AS LG M+AE SDGTE DRAGRVIVEPD
Sbjct 243 TAVDYMGITIKEKDGGERRIECACKVWAAGVQASSLGAMLAEQSDGTETDRAGRVIVEPD 302
Query 310 LTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNK 369
LTVKGHP VFVVGDLM VPGVPG+AQGAIQGA+YA TVIKH +KG D+PA+RKPF Y NK
Sbjct 303 LTVKGHPYVFVVGDLMSVPGVPGMAQGAIQGAKYAATVIKHALKGEDNPADRKPFRYVNK 362
Query 370 GSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARG 429
GSMA ISR+SAVAQVGK+EFAG+FAWLAWLVLHL YL+G+RNR+AA+FAWGISF+GR RG
Sbjct 363 GSMALISRYSAVAQVGKVEFAGFFAWLAWLVLHLYYLIGHRNRLAAMFAWGISFLGRTRG 422
Query 430 QMAITSQMIYARLVMTLMEQQ-AQGALAAAEQAEHAEQEAAG 470
QMAITSQMIYAR ++ +EQQ A+G LAAAE+AE AEQ+AAG
Sbjct 423 QMAITSQMIYARPLVNWVEQQAAEGTLAAAERAETAEQKAAG 464
>gi|240168857|ref|ZP_04747516.1| NADH dehydrogenase Ndh_1 [Mycobacterium kansasii ATCC 12478]
Length=471
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/452 (85%), Positives = 420/452 (93%), Gaps = 0/452 (0%)
Query 1 MTLSSGEPSAVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVAT 60
MT S E S+VG RH VVIIGSGFGGLNAAK LKRADVDITLISKTTTHLFQPLLYQVAT
Sbjct 1 MTPPSSEGSSVGRRHHVVIIGSGFGGLNAAKRLKRADVDITLISKTTTHLFQPLLYQVAT 60
Query 61 GILSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAG 120
GILSEGDIAPTTRLILR QKNVRVLLGE+ +DL A+TVTSKLMDM TVTP+DSLIVAAG
Sbjct 61 GILSEGDIAPTTRLILRNQKNVRVLLGEIIDMDLNAKTVTSKLMDMQTVTPFDSLIVAAG 120
Query 121 AQQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGP 180
AQQSYFGND+FA FAPGMKTIDDALELRGRILGAFEAAEV+TDHAER+RRLTFVVVGAGP
Sbjct 121 AQQSYFGNDDFAIFAPGMKTIDDALELRGRILGAFEAAEVATDHAERKRRLTFVVVGAGP 180
Query 181 TGVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMD 240
TGVE+AG+IV+LAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQR+LEKMD
Sbjct 181 TGVELAGEIVQLAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRKLEKMD 240
Query 241 VEVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDR 300
VEVQLNAMVTAVDYKGIT+++KDG ERRI+CACKVWAAGV ASPLGKM+AE S+GTE DR
Sbjct 241 VEVQLNAMVTAVDYKGITVRDKDGTERRIDCACKVWAAGVQASPLGKMVAEQSEGTETDR 300
Query 301 AGRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPAN 360
AGRV+VEPDLTVKGHP VFV+GDLM VPGVPG+AQGAIQGARYATT+IKH VKG+DDPAN
Sbjct 301 AGRVVVEPDLTVKGHPYVFVIGDLMAVPGVPGMAQGAIQGARYATTIIKHAVKGHDDPAN 360
Query 361 RKPFHYFNKGSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWG 420
RKPFHY NKGSMA IS SAV ++GK+EFAG+FAWLAWL+LHL+YLVG+RNRIAA ++WG
Sbjct 361 RKPFHYVNKGSMALISHFSAVTKIGKIEFAGFFAWLAWLLLHLLYLVGHRNRIAAAYSWG 420
Query 421 ISFMGRARGQMAITSQMIYARLVMTLMEQQAQ 452
++F+GR RGQMAITSQM+YARL M ++ A+
Sbjct 421 LAFLGRTRGQMAITSQMVYARLAMRYVQAHAE 452
>gi|342859125|ref|ZP_08715779.1| hypothetical protein MCOL_09613 [Mycobacterium colombiense CECT
3035]
gi|342133366|gb|EGT86569.1| hypothetical protein MCOL_09613 [Mycobacterium colombiense CECT
3035]
Length=459
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/456 (85%), Positives = 420/456 (93%), Gaps = 1/456 (0%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RHRVVIIGSGFGGL+AAKAL+RADVDIT+ISKTTTHLFQPLLYQVATGILSEGDIAPTTR
Sbjct 3 RHRVVIIGSGFGGLSAAKALRRADVDITVISKTTTHLFQPLLYQVATGILSEGDIAPTTR 62
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
LILRRQ+NVRVL GEV+A+DL A+TVTS LM M TVT YDSLIVAAGAQQSYFG+DE+A
Sbjct 63 LILRRQQNVRVLWGEVSAVDLTAKTVTSHLMGMDTVTQYDSLIVAAGAQQSYFGHDEYAA 122
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
FAPGMK+IDDALELRGRILGAFEAAEV+TD AER+RRLTFVVVGAGPTGVE+AG+IV+LA
Sbjct 123 FAPGMKSIDDALELRGRILGAFEAAEVATDPAERQRRLTFVVVGAGPTGVELAGEIVQLA 182
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMV+AVD
Sbjct 183 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVSAVD 242
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
Y GITIKEKDGGERRIECACKVWAAGV AS LG MIAE SDGTE DRAGRVIVEPDLTVK
Sbjct 243 YMGITIKEKDGGERRIECACKVWAAGVQASSLGAMIAEQSDGTETDRAGRVIVEPDLTVK 302
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
GHP VFVVGDLM VPGVPG+AQGAIQGA+YA +IK KG+DDPA RKPF Y NKGSMA
Sbjct 303 GHPYVFVVGDLMSVPGVPGMAQGAIQGAKYAAAIIKQAAKGHDDPAERKPFRYVNKGSMA 362
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
ISR+SAVAQVGK+EFAG+ AWLAWL+LHL YL+G+RNRIAA+FAWGISF+GR RGQMAI
Sbjct 363 LISRYSAVAQVGKVEFAGFVAWLAWLLLHLYYLIGHRNRIAAMFAWGISFLGRTRGQMAI 422
Query 434 TSQMIYARLVMTLMEQQAQ-GALAAAEQAEHAEQEA 468
TSQMIYAR V+ +E+QAQ G LAAAE + AE++A
Sbjct 423 TSQMIYARPVVDWLERQAQDGTLAAAEHVDSAEKQA 458
>gi|41409972|ref|NP_962808.1| hypothetical protein MAP3874c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398805|gb|AAS06424.1| hypothetical protein MAP_3874c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=480
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/460 (84%), Positives = 416/460 (91%), Gaps = 5/460 (1%)
Query 14 RHRVVIIGSGFGGLNAAKALKR----ADVDITLISKTTTHLFQPLLYQVATGILSEGDIA 69
RHRVVIIGSGFGGL AAKALKR VDITLISKTTTHLFQPLLYQVATGILSEGDIA
Sbjct 20 RHRVVIIGSGFGGLTAAKALKRVPEGTQVDITLISKTTTHLFQPLLYQVATGILSEGDIA 79
Query 70 PTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGND 129
PTTRLILR+QKNVRVL G+V+AIDL A+TVTS LM M TVTPYDSLIVAAGAQQSYFG+D
Sbjct 80 PTTRLILRKQKNVRVLWGDVSAIDLTARTVTSHLMGMDTVTPYDSLIVAAGAQQSYFGHD 139
Query 130 EFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQI 189
E+A FAPGMK++DDALELRGRILGAFEAAEV+TD AER RRLTFVVVGAGPTGVE+AG+I
Sbjct 140 EYAAFAPGMKSVDDALELRGRILGAFEAAEVATDPAERRRRLTFVVVGAGPTGVELAGEI 199
Query 190 VELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMV 249
V+LAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRL+KMDVEVQLNAMV
Sbjct 200 VQLAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLQKMDVEVQLNAMV 259
Query 250 TAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPD 309
TAVDY GIT+KEKDG ERRIECACKVWAAGV AS LG MIAE SDGTE DRAGRVIVEPD
Sbjct 260 TAVDYMGITVKEKDGAERRIECACKVWAAGVQASALGAMIAEQSDGTETDRAGRVIVEPD 319
Query 310 LTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNK 369
LTVKGHP VFVVGDLM VPGVPG+AQGAIQGA+YA +IK VKG D+PA RKPF Y NK
Sbjct 320 LTVKGHPYVFVVGDLMSVPGVPGMAQGAIQGAKYAAGIIKQAVKGQDNPAERKPFRYVNK 379
Query 370 GSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARG 429
GSMA ISR+SAVAQVG++EFAG+ AWLAWL+LHL YL+G+RNR+AA+FAWGISF+GR RG
Sbjct 380 GSMALISRYSAVAQVGRVEFAGFIAWLAWLLLHLYYLIGHRNRLAAMFAWGISFLGRTRG 439
Query 430 QMAITSQMIYARLVMTLMEQQAQ-GALAAAEQAEHAEQEA 468
QMAITSQMIYAR V+ +E+QAQ G LAAAE + AE++A
Sbjct 440 QMAITSQMIYARPVVEWLERQAQDGTLAAAEHVDSAEKQA 479
>gi|118464827|ref|YP_883899.1| DoxD family protein/pyridine nucleotide-disulfide oxidoreductase
[Mycobacterium avium 104]
gi|254777210|ref|ZP_05218726.1| DoxD family protein/pyridine nucleotide-disulfide oxidoreductase
[Mycobacterium avium subsp. avium ATCC 25291]
gi|118166114|gb|ABK67011.1| DoxD family protein/pyridine nucleotide-disulfide oxidoreductase
[Mycobacterium avium 104]
Length=463
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/460 (83%), Positives = 416/460 (91%), Gaps = 5/460 (1%)
Query 14 RHRVVIIGSGFGGLNAAKALKR----ADVDITLISKTTTHLFQPLLYQVATGILSEGDIA 69
RHRVVIIGSGFGGL AAKALKR VDITLISKTTTHLFQPLLYQVATGILSEGDIA
Sbjct 3 RHRVVIIGSGFGGLTAAKALKRVPKGTQVDITLISKTTTHLFQPLLYQVATGILSEGDIA 62
Query 70 PTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGND 129
PTTRLILR+QKNVRVL G+V+AIDL A+TVTS LM M TVTPYDSLIVAAGAQQSYFG+D
Sbjct 63 PTTRLILRKQKNVRVLWGDVSAIDLTARTVTSHLMGMDTVTPYDSLIVAAGAQQSYFGHD 122
Query 130 EFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQI 189
E+A FAPGMK++DDALELRGRILGAFEAAEV+TD AER RRLTFVVVGAGPTGVE+AG+I
Sbjct 123 EYAAFAPGMKSVDDALELRGRILGAFEAAEVATDPAERRRRLTFVVVGAGPTGVELAGEI 182
Query 190 VELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMV 249
V+LAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRL+KMDVEVQLNAMV
Sbjct 183 VQLAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLQKMDVEVQLNAMV 242
Query 250 TAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPD 309
TAVDY GIT+KEKDG ERRIECACKVWAAGV AS LG MIAE SDGTE DRAGRVIVEPD
Sbjct 243 TAVDYMGITVKEKDGAERRIECACKVWAAGVQASALGAMIAEQSDGTETDRAGRVIVEPD 302
Query 310 LTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNK 369
LTVKGHP VFVVGDLM VPGVPG+AQGAIQGA+YA +IK VKG D+PA RKPF Y NK
Sbjct 303 LTVKGHPYVFVVGDLMSVPGVPGMAQGAIQGAKYAAGIIKQAVKGQDNPAERKPFRYVNK 362
Query 370 GSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARG 429
GSMA ISR+SAVAQVG++EFAG+ AWLAWL+LHL YL+G+RNR+AA+FAWGISF+GR RG
Sbjct 363 GSMALISRYSAVAQVGRVEFAGFIAWLAWLLLHLYYLIGHRNRLAAMFAWGISFLGRTRG 422
Query 430 QMAITSQMIYARLVMTLMEQQAQ-GALAAAEQAEHAEQEA 468
QMAITSQMIYAR V+ +E++AQ G LAAAE + AE++A
Sbjct 423 QMAITSQMIYARPVVEWLERRAQDGTLAAAEHVDSAEKQA 462
>gi|296167852|ref|ZP_06850035.1| NADH dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295896977|gb|EFG76600.1| NADH dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=459
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/439 (85%), Positives = 403/439 (92%), Gaps = 0/439 (0%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RHRVVIIGSGFGGLNAAKALKRADVD+TLISKTTTHLFQPLLYQVATGILSEGDIAPTTR
Sbjct 3 RHRVVIIGSGFGGLNAAKALKRADVDVTLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 62
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
LILRRQKNVRVL GEV+ IDL A+TVTS LM M TVTP+DSLIVAAGAQQSYFG+DE+A
Sbjct 63 LILRRQKNVRVLWGEVSEIDLTAKTVTSHLMGMQTVTPFDSLIVAAGAQQSYFGHDEYAA 122
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
FAPGMK++DDALELR RILGAFEAAEV+TD AER+RRLTFVVVGAGPTGVE+AG+IV+LA
Sbjct 123 FAPGMKSVDDALELRARILGAFEAAEVATDPAERQRRLTFVVVGAGPTGVELAGEIVQLA 182
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
ERTLAGAFRTITPSECRVILLDAAPAVLPPMG LGLKAQRRL+KMDVE+QLNAMVTAVD
Sbjct 183 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGENLGLKAQRRLQKMDVEIQLNAMVTAVD 242
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
Y GIT+K+ DG +RRIECACKVWAAGV AS LGKM+AE S GTE DRAGRVIVEPDLTVK
Sbjct 243 YLGITVKDADGSQRRIECACKVWAAGVQASELGKMLAEQSAGTETDRAGRVIVEPDLTVK 302
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
GHP VFVVGDLM VPGVPG+AQGAIQGA Y T +IK VKG DDPANRKPF YF+KGSMA
Sbjct 303 GHPYVFVVGDLMSVPGVPGMAQGAIQGAHYVTRLIKQAVKGQDDPANRKPFKYFDKGSMA 362
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
ISR+SAVA+VGKLEF G+ AWLAWL+LHL YL+G+RNRIAA+FAWGISF+GR RGQMAI
Sbjct 363 LISRYSAVAKVGKLEFGGFIAWLAWLLLHLYYLIGHRNRIAAMFAWGISFLGRTRGQMAI 422
Query 434 TSQMIYARLVMTLMEQQAQ 452
TSQM+YAR V+ +E+QAQ
Sbjct 423 TSQMMYARPVVDWVERQAQ 441
>gi|289760505|ref|ZP_06519883.1| membrane NADH dehydrogenase ndhA [Mycobacterium tuberculosis
GM 1503]
gi|289708011|gb|EFD72027.1| membrane NADH dehydrogenase ndhA [Mycobacterium tuberculosis
GM 1503]
Length=402
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/357 (100%), Positives = 357/357 (100%), Gaps = 0/357 (0%)
Query 114 SLIVAAGAQQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTF 173
SLIVAAGAQQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTF
Sbjct 46 SLIVAAGAQQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTF 105
Query 174 VVVGAGPTGVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQ 233
VVVGAGPTGVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQ
Sbjct 106 VVVGAGPTGVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQ 165
Query 234 RRLEKMDVEVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGS 293
RRLEKMDVEVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGS
Sbjct 166 RRLEKMDVEVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGS 225
Query 294 DGTEIDRAGRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVK 353
DGTEIDRAGRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVK
Sbjct 226 DGTEIDRAGRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVK 285
Query 354 GNDDPANRKPFHYFNKGSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRI 413
GNDDPANRKPFHYFNKGSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRI
Sbjct 286 GNDDPANRKPFHYFNKGSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRI 345
Query 414 AALFAWGISFMGRARGQMAITSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEAAG 470
AALFAWGISFMGRARGQMAITSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEAAG
Sbjct 346 AALFAWGISFMGRARGQMAITSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEAAG 402
>gi|336460386|gb|EGO39286.1| NADH dehydrogenase, FAD-containing subunit [Mycobacterium avium
subsp. paratuberculosis S397]
Length=451
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/460 (82%), Positives = 404/460 (88%), Gaps = 17/460 (3%)
Query 14 RHRVVIIGSGFGGLNAAKALKR----ADVDITLISKTTTHLFQPLLYQVATGILSEGDIA 69
RHRVVIIGSGFGGL AAKALKR VDITLISKTTTHLFQPLLYQVATGILSEGDIA
Sbjct 3 RHRVVIIGSGFGGLTAAKALKRVPEGTQVDITLISKTTTHLFQPLLYQVATGILSEGDIA 62
Query 70 PTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGND 129
PTTRLILR+QKNVRVL G+V+AIDL A+TVTS LM M TVTPYDSLIVAAGAQQSYFG+D
Sbjct 63 PTTRLILRKQKNVRVLWGDVSAIDLTARTVTSHLMGMDTVTPYDSLIVAAGAQQSYFGHD 122
Query 130 EFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQI 189
E+A FAPGMK++DDALELRGRILGAFEAAEV+TD AER RRLTFVVVGAGPTGVE
Sbjct 123 EYAAFAPGMKSVDDALELRGRILGAFEAAEVATDPAERRRRLTFVVVGAGPTGVE----- 177
Query 190 VELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMV 249
LAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRL+KMDVEVQLNAMV
Sbjct 178 -------LAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLQKMDVEVQLNAMV 230
Query 250 TAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPD 309
TAVDY GIT+KEKDG ERRIECACKVWAAGV AS LG MIAE SDGTE DRAGRVIVEPD
Sbjct 231 TAVDYMGITVKEKDGAERRIECACKVWAAGVQASALGAMIAEQSDGTETDRAGRVIVEPD 290
Query 310 LTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNK 369
LTVKGHP VFVVGDLM VPGVPG+AQGAIQGA+YA +IK VKG D+PA RKPF Y NK
Sbjct 291 LTVKGHPYVFVVGDLMSVPGVPGMAQGAIQGAKYAAGIIKQAVKGQDNPAERKPFRYVNK 350
Query 370 GSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARG 429
GSMA ISR+SAVAQVG++EFAG+ AWLAWL+LHL YL+G+RNR+AA+FAWGISF+GR RG
Sbjct 351 GSMALISRYSAVAQVGRVEFAGFIAWLAWLLLHLYYLIGHRNRLAAMFAWGISFLGRTRG 410
Query 430 QMAITSQMIYARLVMTLMEQQAQ-GALAAAEQAEHAEQEA 468
QMAITSQMIYAR V+ +E+QAQ G LAAAE + AE++A
Sbjct 411 QMAITSQMIYARPVVEWLERQAQDGTLAAAEHVDSAEKQA 450
>gi|289445929|ref|ZP_06435673.1| membrane NADH dehydrogenase ndhA [Mycobacterium tuberculosis
CPHL_A]
gi|289418887|gb|EFD16088.1| membrane NADH dehydrogenase ndhA [Mycobacterium tuberculosis
CPHL_A]
Length=346
Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/340 (100%), Positives = 340/340 (100%), Gaps = 0/340 (0%)
Query 1 MTLSSGEPSAVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVAT 60
MTLSSGEPSAVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVAT
Sbjct 1 MTLSSGEPSAVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVAT 60
Query 61 GILSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAG 120
GILSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAG
Sbjct 61 GILSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAG 120
Query 121 AQQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGP 180
AQQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGP
Sbjct 121 AQQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGP 180
Query 181 TGVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMD 240
TGVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMD
Sbjct 181 TGVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMD 240
Query 241 VEVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDR 300
VEVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDR
Sbjct 241 VEVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDR 300
Query 301 AGRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQG 340
AGRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQG
Sbjct 301 AGRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQG 340
>gi|54024511|ref|YP_118753.1| putative NADH dehydrogenase [Nocardia farcinica IFM 10152]
gi|54016019|dbj|BAD57389.1| putative NADH dehydrogenase [Nocardia farcinica IFM 10152]
Length=476
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/431 (73%), Positives = 360/431 (84%), Gaps = 1/431 (0%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RH+VV+IGSGFGGL K LKRADVD+TLISKT+THLFQPLLYQVATGILS G+IAP TR
Sbjct 10 RHQVVVIGSGFGGLFGTKHLKRADVDVTLISKTSTHLFQPLLYQVATGILSVGEIAPATR 69
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
L+LR+QKN RVLLGEV IDL+A+TVTS+L++ TVTP+DSLIVA GAQQSYFGND+FAT
Sbjct 70 LVLRKQKNARVLLGEVIDIDLEAKTVTSRLLNQNTVTPFDSLIVATGAQQSYFGNDQFAT 129
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
+APGMKTIDDALELRGRILGAFE AE++T R+R LTFVV+GAGPTGVE+AGQI ELA
Sbjct 130 YAPGMKTIDDALELRGRILGAFEGAELATTQEMRDRLLTFVVIGAGPTGVELAGQIAELA 189
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
+RTL G F I P + RVIL++ A AVL PMGPKLG KAQRRLE+M VE+QLNAMVT VD
Sbjct 190 DRTLEGTFDNIDPRDARVILIEGAGAVLGPMGPKLGGKAQRRLERMGVEIQLNAMVTDVD 249
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
G+T+K+ DG RRIE +CKVW+AGV ASPLGKM+AE S GTE+DRAGRVIVEPDLT+K
Sbjct 250 AHGVTVKDADGTIRRIESSCKVWSAGVQASPLGKMLAERSAGTEVDRAGRVIVEPDLTIK 309
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
GHPNVFVVGDLM VPGVPG AQGAIQGA YA IK + G P +RKPF YFNKGSMA
Sbjct 310 GHPNVFVVGDLMSVPGVPGQAQGAIQGATYAAKQIKAGLHGQ-RPEDRKPFKYFNKGSMA 368
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
T+SR SAV Q+GKLEF G+ AWLAWL LHL YL+GYR+RI W ++F+GR+RGQMA
Sbjct 369 TVSRFSAVCQIGKLEFGGFIAWLAWLALHLYYLIGYRSRIITCIQWFVTFLGRSRGQMAA 428
Query 434 TSQMIYARLVM 444
T Q ++ARL +
Sbjct 429 TEQWVFARLAL 439
>gi|296140013|ref|YP_003647256.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Tsukamurella
paurometabola DSM 20162]
gi|296028147|gb|ADG78917.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Tsukamurella
paurometabola DSM 20162]
Length=483
Score = 633 bits (1633), Expect = 2e-179, Method: Compositional matrix adjust.
Identities = 307/436 (71%), Positives = 358/436 (83%), Gaps = 2/436 (0%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RH+VV+IGSGFGGL KALKRADVD+T+I+KT HLFQPLLYQVATGILSEG+IAP +R
Sbjct 7 RHKVVVIGSGFGGLFGTKALKRADVDVTVIAKTQHHLFQPLLYQVATGILSEGEIAPASR 66
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
++LR+QKN +VLLGEV IDL+ +TVTS L+D TVTP+DSLIVAAGA QSYFGND FA
Sbjct 67 VVLRKQKNAQVLLGEVTDIDLENRTVTSHLLDRVTVTPFDSLIVAAGANQSYFGNDRFAE 126
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
FAPGMKTIDDALELRGRILGAFE AE+S DH ERER LTFVV+GAGPTGVE+AGQI E++
Sbjct 127 FAPGMKTIDDALELRGRILGAFEQAELSHDHDERERLLTFVVIGAGPTGVELAGQIAEMS 186
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
+ TL GAFR I P+E RVILLDAAPAVLPPMG KLG A RL KM VE+QLNAMV VD
Sbjct 187 DNTLKGAFRNIDPTEARVILLDAAPAVLPPMGEKLGNAAADRLRKMGVEIQLNAMVVDVD 246
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
G+ +KEKDG ERRIE CKVW+AGV+ASPLGK+IAE S G E+DRAGRV V PDLTV
Sbjct 247 ADGLVVKEKDGTERRIEAQCKVWSAGVSASPLGKIIAEQS-GAEVDRAGRVKVLPDLTVP 305
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
G+PNVFVVGD+M V GVPG+AQGAIQG+ YA IK + G PA+RKPF YF+KGSMA
Sbjct 306 GNPNVFVVGDMMAVDGVPGMAQGAIQGSTYAAKAIKAGLAGQ-SPADRKPFKYFDKGSMA 364
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
T+SR SAVA+VGKLEF+G+FAWL WL LHL Y+VGY+NR+ L +WG++F+ RGQM I
Sbjct 365 TVSRASAVAKVGKLEFSGFFAWLGWLALHLWYIVGYQNRVITLTSWGVTFLTNKRGQMTI 424
Query 434 TSQMIYARLVMTLMEQ 449
T Q +YAR + ++
Sbjct 425 TEQQVYARTALDALQN 440
>gi|118469404|ref|YP_887924.1| NADH dehydrogenase [Mycobacterium smegmatis str. MC2 155]
gi|2708705|gb|AAC46302.1| NADH dehydrogenase [Mycobacterium smegmatis str. MC2 155]
gi|118170691|gb|ABK71587.1| NADH dehydrogenase [Mycobacterium smegmatis str. MC2 155]
Length=457
Score = 616 bits (1588), Expect = 3e-174, Method: Compositional matrix adjust.
Identities = 309/451 (69%), Positives = 359/451 (80%), Gaps = 6/451 (1%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RH+VVIIGSGFGGL AAK LKRADVD+ LI++TT HLFQPLLYQVATGI+SEG+IAP TR
Sbjct 11 RHKVVIIGSGFGGLTAAKTLKRADVDVKLIARTTHHLFQPLLYQVATGIISEGEIAPATR 70
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
+ILR+QKN +VLLG+V IDL+ +TV S L+ T TPYDSLI+AAGA QSYFGND FA
Sbjct 71 VILRKQKNAQVLLGDVTHIDLENKTVDSVLLGHTYSTPYDSLIIAAGAGQSYFGNDHFAE 130
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
FAPGMK+IDDALELRGRILGAFE AE S+D R + LTF VVGAGPTGVE+AGQI ELA
Sbjct 131 FAPGMKSIDDALELRGRILGAFEQAERSSDPVRRAKLLTFTVVGAGPTGVEMAGQIAELA 190
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
++TL G+FR I P+E RVILLDAAPAVLPPMG KLG KA+ RLEKM VEVQL AMVT VD
Sbjct 191 DQTLRGSFRHIDPTEARVILLDAAPAVLPPMGEKLGKKARARLEKMGVEVQLGAMVTDVD 250
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
GIT+K+ DG RRIE ACKVW+AGV+ASPLGK +AE S G E+DRAGRV V+PDLT+
Sbjct 251 RNGITVKDSDGTIRRIESACKVWSAGVSASPLGKDLAEQS-GVELDRAGRVKVQPDLTLP 309
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
GHPNVFVVGD+ V GVPGVAQGAIQG RYA +IK V G P R PF YF+KGSMA
Sbjct 310 GHPNVFVVGDMAAVEGVPGVAQGAIQGGRYAAKIIKREVSGT-SPKIRTPFEYFDKGSMA 368
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
T+SR SAVA+VG +EFAG+FAWL WLVLHLVYLVG++ +I L +WG++F+ RGQ+ I
Sbjct 369 TVSRFSAVAKVGPVEFAGFFAWLCWLVLHLVYLVGFKTKIVTLLSWGVTFLSTKRGQLTI 428
Query 434 TSQMIYARLVMTLMEQQAQGALAAAEQAEHA 464
T Q YAR + +E+ A AA + E A
Sbjct 429 TEQQAYARTRIEELEEIA----AAVQDTEKA 455
>gi|262202653|ref|YP_003273861.1| NADH dehydrogenase (ubiquinone) [Gordonia bronchialis DSM 43247]
gi|262086000|gb|ACY21968.1| NADH dehydrogenase (ubiquinone) [Gordonia bronchialis DSM 43247]
Length=483
Score = 613 bits (1580), Expect = 3e-173, Method: Compositional matrix adjust.
Identities = 311/476 (66%), Positives = 370/476 (78%), Gaps = 21/476 (4%)
Query 3 LSSGEPSAVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGI 62
+SS P A R VVIIGSGFGGL AA+ L++ADVD+TLI+KTT HLFQP+LYQVATGI
Sbjct 1 MSSPTPHA---RKHVVIIGSGFGGLFAAQRLRKADVDVTLIAKTTHHLFQPMLYQVATGI 57
Query 63 LSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQ 122
++EG+IAP TR++LR+Q+N +VL+G+V I+L+A+TVTS+L++ TVTPYDSLI+AAGA
Sbjct 58 VAEGEIAPATRVVLRKQRNTKVLMGDVFEINLEAKTVTSRLLERVTVTPYDSLIIAAGAD 117
Query 123 QSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTG 182
QSYFGND FA +APGMKTID ALELRGRILGAFE AE+S D AER + LTFVVVGAGPTG
Sbjct 118 QSYFGNDHFAEYAPGMKTIDHALELRGRILGAFEQAELSDDPAERAKLLTFVVVGAGPTG 177
Query 183 VEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVE 242
VE+AGQI E++++TL GAFR I P+E RVILLDAAPAVLPP G KLG KA RRLEKM VE
Sbjct 178 VELAGQIAEMSDKTLKGAFRNIDPTEARVILLDAAPAVLPPFGEKLGGKAARRLEKMGVE 237
Query 243 VQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAG 302
VQLNAMV +DY G+ +KEKDG RRIE CKVW+AGV ASPLGK +AE S G E+DRAG
Sbjct 238 VQLNAMVVDLDYDGLVVKEKDGTTRRIESQCKVWSAGVQASPLGKQLAEQS-GVELDRAG 296
Query 303 RVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRK 362
RV V+PDL++ GHP+VFVVGD+M V GVPGVAQGAIQG RYA IK +KG+ PA+RK
Sbjct 297 RVKVQPDLSIPGHPDVFVVGDMMAVDGVPGVAQGAIQGGRYAADAIKAELKGH-SPADRK 355
Query 363 PFHYFNKGSMATISRHSAVAQV------GKLEFAGYFAWLAWLVLHLVYLVGYRNRIAAL 416
PF Y++KGSMATISR SAV QV K E GYFAWL WL LHLVYLVG+RNR+ L
Sbjct 356 PFSYYDKGSMATISRFSAVMQVPIPGTKKKFETEGYFAWLGWLALHLVYLVGFRNRLNTL 415
Query 417 FAWGISFMGRARGQMAITSQMIYARLVMTLMEQQAQGALAAAEQ--AEHAEQEAAG 470
W +F R R Q+A+T Q +YAR + G L+A E+ E E E+AG
Sbjct 416 VNWFFAFTTRGRSQLAVTEQQVYARTAI--------GQLSALEKKSVEETEAESAG 463
>gi|120404057|ref|YP_953886.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Mycobacterium
vanbaalenii PYR-1]
gi|119956875|gb|ABM13880.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Mycobacterium
vanbaalenii PYR-1]
Length=457
Score = 611 bits (1576), Expect = 7e-173, Method: Compositional matrix adjust.
Identities = 306/451 (68%), Positives = 362/451 (81%), Gaps = 6/451 (1%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RH+VVIIGSGFGGL AAK LKRADVDI LI++TT HLFQPLLYQVATGI+SEG+IAP TR
Sbjct 11 RHKVVIIGSGFGGLTAAKTLKRADVDIKLIARTTHHLFQPLLYQVATGIISEGEIAPATR 70
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
+ILR QKN +VLLG+V IDL+ +TV S+L+ T VTP+DSLIVAAGA QSYFGND FA
Sbjct 71 VILRNQKNAQVLLGDVTGIDLQTKTVRSELLGHTYVTPFDSLIVAAGAGQSYFGNDHFAE 130
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
+APGMK+IDDALELRGRILGAFE AE S+D A RE+ LTFVVVGAGPTGVE+AGQI ELA
Sbjct 131 WAPGMKSIDDALELRGRILGAFEQAERSSDPARREKLLTFVVVGAGPTGVEMAGQIAELA 190
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
+ TL GAFR I ++ RVILLDAAPAVLPPMG KLG KAQ RLEK+ VE+QLNAMVT VD
Sbjct 191 DHTLKGAFRHIDSTKARVILLDAAPAVLPPMGEKLGKKAQARLEKLGVEIQLNAMVTDVD 250
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
GIT+K+ DG RRIE ACKVW+AGV+ASPLG+ +AEGS G E+DRAGRV V PDL++
Sbjct 251 RNGITVKDPDGTIRRIEAACKVWSAGVSASPLGRDLAEGS-GVELDRAGRVKVLPDLSLP 309
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
GHPNVFVVGD+ V GVPG+AQGAIQG +YA I +KG DP R+PF YF+KGSMA
Sbjct 310 GHPNVFVVGDMAAVEGVPGMAQGAIQGGKYAAKAIAAGLKGA-DPTEREPFKYFDKGSMA 368
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
T+SR SAVA++G LEF G+ AWLAWLVLHLVYLVG++ +I L +W ++F+ RGQ+ I
Sbjct 369 TVSRFSAVAKIGPLEFEGFVAWLAWLVLHLVYLVGFKTKIVTLLSWTVTFLSTKRGQLTI 428
Query 434 TSQMIYARLVMTLMEQQAQGALAAAEQAEHA 464
T Q YAR + +E+ A A+ ++ E A
Sbjct 429 TEQQAYARTRIEELEEIA----ASVQETERA 455
>gi|343928485|ref|ZP_08767933.1| NADH dehydrogenase [Gordonia alkanivorans NBRC 16433]
gi|343761670|dbj|GAA14859.1| NADH dehydrogenase [Gordonia alkanivorans NBRC 16433]
Length=507
Score = 605 bits (1561), Expect = 4e-171, Method: Compositional matrix adjust.
Identities = 304/464 (66%), Positives = 359/464 (78%), Gaps = 11/464 (2%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
R +VVIIGSGFGGL AA+ L +ADVD+TLI+KTT HLFQP+LYQVATGI++EG+IAP TR
Sbjct 16 RRKVVIIGSGFGGLFAAQRLAKADVDVTLIAKTTHHLFQPMLYQVATGIVAEGEIAPATR 75
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
++LR+QKN VL+G+V IDL+A+TV+S+L++ TVTPYD LIVAAGA QSYFGND FA
Sbjct 76 VVLRKQKNTSVLMGDVFDIDLEAKTVSSRLLERITVTPYDDLIVAAGADQSYFGNDHFAE 135
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
+APGMKTID ALELRGRILGAFE AE+S D AER + LTFVVVGAGPTGVE+AGQI E++
Sbjct 136 YAPGMKTIDHALELRGRILGAFEQAELSHDPAERAKLLTFVVVGAGPTGVELAGQIAEMS 195
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
++TL GAFR I P+E RVILLDAAPAVLPP GPKLG KA RLEKM VE+QLNAMV VD
Sbjct 196 DKTLKGAFRNIDPTEARVILLDAAPAVLPPFGPKLGGKAAARLEKMGVEIQLNAMVVDVD 255
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
Y G+ +KEKDG RRIE CKVW+AGV ASPLG+ +AE S G E+DRAGRV V PDLT+
Sbjct 256 YDGLVVKEKDGTTRRIESQCKVWSAGVQASPLGQQLAEQS-GVELDRAGRVKVGPDLTIP 314
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
GHP VFVVGD+M V GVPGVAQGAIQG RYA IK +KG P RKPF Y++KGSMA
Sbjct 315 GHPEVFVVGDMMAVDGVPGVAQGAIQGGRYAADAIKAELKGQ-TPDQRKPFSYWDKGSMA 373
Query 374 TISRHSAVAQV------GKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRA 427
TISR+SAV QV E GYFAWL WL LHLVYLVG+RNR+ L W +F R
Sbjct 374 TISRYSAVMQVPVPGFKKPFETEGYFAWLGWLALHLVYLVGFRNRLNTLINWFFAFTTRG 433
Query 428 RGQMAITSQMIYARLV---MTLMEQQAQGALAAAEQAEHAEQEA 468
R Q+A+T Q +YAR ++ +E+QA + AE AE ++
Sbjct 434 RSQLAVTEQQVYARTAIGQLSALEKQAAEGNGSGPDAEAAETDS 477
>gi|108799767|ref|YP_639964.1| NADH dehydrogenase [Mycobacterium sp. MCS]
gi|119868877|ref|YP_938829.1| NADH dehydrogenase [Mycobacterium sp. KMS]
gi|108770186|gb|ABG08908.1| NADH dehydrogenase [Mycobacterium sp. MCS]
gi|119694966|gb|ABL92039.1| NADH dehydrogenase [Mycobacterium sp. KMS]
Length=461
Score = 605 bits (1559), Expect = 6e-171, Method: Compositional matrix adjust.
Identities = 303/456 (67%), Positives = 360/456 (79%), Gaps = 6/456 (1%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RH+VVIIGSGFGGL+AAK LKRADVDI LI++TT HLFQPLLYQVATGI+SEG+IAP TR
Sbjct 11 RHKVVIIGSGFGGLSAAKTLKRADVDIKLIARTTHHLFQPLLYQVATGIISEGEIAPATR 70
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
++LR+QKNV+VLLG+V +DL+ + V S+L+ TPYDSL++AAGA QSYFGND FA
Sbjct 71 VVLRKQKNVQVLLGDVTHVDLQNRLVHSELLGHDYATPYDSLVIAAGAGQSYFGNDHFAE 130
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
+APGMK+IDDALELRGRILGAFE AE S+D RE+ LTFVVVGAGPTGVE+AGQI ELA
Sbjct 131 WAPGMKSIDDALELRGRILGAFEQAERSSDPKRREKLLTFVVVGAGPTGVEMAGQIAELA 190
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
+ TL G FR I P+ RVILLDAAPAVLPPMG KLG KA RLEKM VE+QLNAMVT VD
Sbjct 191 DYTLKGTFRHIDPTSARVILLDAAPAVLPPMGEKLGKKAAARLEKMGVEIQLNAMVTDVD 250
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
GIT+K+ DG RRIE ACKVW+AGV+ASPLG+ +A D E+DRAGRV V PDL++
Sbjct 251 RNGITVKDPDGKLRRIESACKVWSAGVSASPLGRDLANQCD-VEVDRAGRVKVLPDLSIP 309
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
GHPNVFVVGD+ V GVPG AQGAIQGARYA +IK+ VKG +PA R+PF YF+KGSMA
Sbjct 310 GHPNVFVVGDMAAVEGVPGQAQGAIQGARYAAKLIKNEVKGA-NPAFRQPFEYFDKGSMA 368
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
T+SR SAVA+VG LEF G+ AWLAWL LHLVYLVG++ +I L +W ++F+ RGQ+ I
Sbjct 369 TVSRFSAVAKVGPLEFGGFIAWLAWLALHLVYLVGFKTKIVTLISWTVTFLSTKRGQLTI 428
Query 434 TSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEAA 469
T Q YAR + +E+ A AA E ++AA
Sbjct 429 TEQQAYARTRIEELEEIA----AAVTDTEREREQAA 460
>gi|226366452|ref|YP_002784235.1| NADH dehydrogenase [Rhodococcus opacus B4]
gi|226244942|dbj|BAH55290.1| NADH dehydrogenase [Rhodococcus opacus B4]
Length=464
Score = 604 bits (1558), Expect = 9e-171, Method: Compositional matrix adjust.
Identities = 296/457 (65%), Positives = 363/457 (80%), Gaps = 2/457 (0%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RHRVV+IGSGFGGL +ALK ADVDIT+I++TT HLFQPLLYQVATGILS GDIAP TR
Sbjct 10 RHRVVVIGSGFGGLFGTQALKNADVDITMIARTTHHLFQPLLYQVATGILSVGDIAPATR 69
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
L+LR+QKN +VLLG+V IDL+A+T+TS+ +D TTVTPYDSLIVAAGA QSYFGND F+
Sbjct 70 LVLRKQKNTQVLLGDVEKIDLEAKTITSRFLDRTTVTPYDSLIVAAGAGQSYFGNDHFSE 129
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
FAPGMKTIDDALELRGRILGAFE AE+S+D AER R LTFVVVGAGPTGVE+AGQI EL+
Sbjct 130 FAPGMKTIDDALELRGRILGAFEQAELSSDPAERARLLTFVVVGAGPTGVELAGQIAELS 189
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
RTL+GAFR I P E RVILLD A VLP G KL KA+++LEK+ VE+QL AMVT VD
Sbjct 190 RRTLSGAFRNIDPREARVILLDGADDVLPVYGGKLSRKARQQLEKLGVEIQLGAMVTDVD 249
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
G+ +K+KDG RRIE CKVW+AGV ASPLGK IA+ SD EIDRAGRV+V PDL+V
Sbjct 250 VDGLVVKDKDGTHRRIESQCKVWSAGVQASPLGKQIADQSD-AEIDRAGRVMVNPDLSVP 308
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
GHP+VFV+GD+M + +PG+AQ A+QG +YA IK + G P +R PF YF+KGSMA
Sbjct 309 GHPDVFVIGDMMSLDKLPGLAQVAMQGGKYAAKQIKAGLNGG-KPEDRPPFKYFDKGSMA 367
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
TISR SAVA+VGKLE +G+ W+AWL +HL+YLVG+R+R++ L +W ++F+GR R QMA
Sbjct 368 TISRFSAVAKVGKLEISGFIGWVAWLAIHLMYLVGFRSRLSTLLSWTVTFLGRGRAQMAS 427
Query 434 TSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEAAG 470
T Q ++AR M +E+ + +A + A +++AAG
Sbjct 428 TEQWVFARNAMEQLERHEREKESADKSAGGEQRKAAG 464
>gi|229493549|ref|ZP_04387334.1| NADH dehydrogenase [Rhodococcus erythropolis SK121]
gi|229319510|gb|EEN85346.1| NADH dehydrogenase [Rhodococcus erythropolis SK121]
Length=471
Score = 604 bits (1557), Expect = 1e-170, Method: Compositional matrix adjust.
Identities = 301/470 (65%), Positives = 363/470 (78%), Gaps = 6/470 (1%)
Query 1 MTLSSGEPSAVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVAT 60
M++ S EP RHRVV+IGSGFGGL +ALK+AD DIT+I++TT HLFQPLLYQVAT
Sbjct 1 MSIQSVEPH----RHRVVVIGSGFGGLFGTQALKKADADITMIARTTHHLFQPLLYQVAT 56
Query 61 GILSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAG 120
GILS GDIAP TRL+LR+QKN +VLLGEV IDL+ QTVTS+L++ TVTP+DSLIVAAG
Sbjct 57 GILSVGDIAPATRLVLRKQKNAQVLLGEVETIDLENQTVTSRLLERVTVTPFDSLIVAAG 116
Query 121 AQQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGP 180
A QSYFGND+FA FAPGMKTIDDALELRGRILGAFE AE+S D AER R LTFVVVGAGP
Sbjct 117 AGQSYFGNDQFAEFAPGMKTIDDALELRGRILGAFEQAELSDDPAERARLLTFVVVGAGP 176
Query 181 TGVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMD 240
TGVE+AGQI EL+ RTL GAFR I P E RV+LLD APAVLP G KL KA LEK+
Sbjct 177 TGVELAGQIAELSRRTLDGAFRKIDPREARVVLLDGAPAVLPVYGGKLSRKAAETLEKLG 236
Query 241 VEVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDR 300
VE+QL+AMVT VD G+ IKEKDG RRIE CKVW+AGV ASPLGK +AE S G E DR
Sbjct 237 VEIQLDAMVTDVDNDGLIIKEKDGTLRRIESQCKVWSAGVQASPLGKQLAEQSGG-ETDR 295
Query 301 AGRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPAN 360
AGRV+V PDL++ GHPNVFV+GD+M + +PG+AQ A+QG +YA IK + G P+
Sbjct 296 AGRVMVNPDLSLPGHPNVFVIGDMMSLDKLPGLAQVAMQGGKYAAKQIKASLDGK-SPSE 354
Query 361 RKPFHYFNKGSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWG 420
R PF YF+KGSMATISR SAVA+VGKLE +G+ W+AWL +HL+YLVG+R+R + L +W
Sbjct 355 RVPFKYFDKGSMATISRFSAVAKVGKLEISGFIGWVAWLAIHLLYLVGFRSRASTLLSWA 414
Query 421 ISFMGRARGQMAITSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEAAG 470
++F GR R QMA T Q ++AR M +E++ + A + + ++AAG
Sbjct 415 VTFFGRGRAQMASTEQQVFARNAMGELEKKNKEATESGSASNGEAKKAAG 464
>gi|126435408|ref|YP_001071099.1| NADH dehydrogenase [Mycobacterium sp. JLS]
gi|126235208|gb|ABN98608.1| NADH dehydrogenase [Mycobacterium sp. JLS]
Length=461
Score = 603 bits (1556), Expect = 2e-170, Method: Compositional matrix adjust.
Identities = 302/456 (67%), Positives = 360/456 (79%), Gaps = 6/456 (1%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RH+VVIIGSGFGGL+AAK LKRADVDI LI++TT HLFQPLLYQVATGI+SEG+IAP TR
Sbjct 11 RHKVVIIGSGFGGLSAAKTLKRADVDIKLIARTTHHLFQPLLYQVATGIISEGEIAPATR 70
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
++LR+QKNV+VLLG+V +DL+ + V S+L+ TPYDSL++AAGA QSYFGND FA
Sbjct 71 VVLRKQKNVQVLLGDVTHVDLQNRLVHSELLGHDYATPYDSLVIAAGAGQSYFGNDHFAE 130
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
+APGMK+IDDALELRGRILGAFE AE S+D RE+ LTFVVVGAGPTGVE+AGQI ELA
Sbjct 131 WAPGMKSIDDALELRGRILGAFEQAERSSDPKRREKLLTFVVVGAGPTGVEMAGQIAELA 190
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
+ TL G FR I P+ RVILLDAAPAVLPPMG KLG +A RLEKM VE+QLNAMVT VD
Sbjct 191 DYTLKGTFRHIDPTSARVILLDAAPAVLPPMGEKLGKRAAARLEKMGVEIQLNAMVTDVD 250
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
GIT+K+ DG RRIE ACKVW+AGV+ASPLG+ +A D E+DRAGRV V PDL++
Sbjct 251 RNGITVKDPDGKLRRIESACKVWSAGVSASPLGRDLANQCD-VEVDRAGRVKVLPDLSIP 309
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
GHPNVFVVGD+ V GVPG AQGAIQGARYA +IK+ VKG +PA R+PF YF+KGSMA
Sbjct 310 GHPNVFVVGDMAAVEGVPGQAQGAIQGARYAAKLIKNEVKGA-NPAFRQPFEYFDKGSMA 368
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
T+SR SAVA+VG LEF G+ AWLAWL LHLVYLVG++ +I L +W ++F+ RGQ+ I
Sbjct 369 TVSRFSAVAKVGPLEFGGFIAWLAWLALHLVYLVGFKTKIVTLISWTVTFLSTKRGQLTI 428
Query 434 TSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEAA 469
T Q YAR + +E+ A AA E ++AA
Sbjct 429 TEQQAYARTRIEELEEIA----AAVTDTEREREQAA 460
>gi|226306598|ref|YP_002766558.1| NADH dehydrogenase [Rhodococcus erythropolis PR4]
gi|226185715|dbj|BAH33819.1| probable NADH dehydrogenase [Rhodococcus erythropolis PR4]
Length=471
Score = 603 bits (1555), Expect = 2e-170, Method: Compositional matrix adjust.
Identities = 300/470 (64%), Positives = 363/470 (78%), Gaps = 6/470 (1%)
Query 1 MTLSSGEPSAVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVAT 60
M++ S EP RHRVV+IGSGFGGL +ALK+AD DIT+I++TT HLFQPLLYQVAT
Sbjct 1 MSIQSVEPH----RHRVVVIGSGFGGLFGTQALKKADADITMIARTTHHLFQPLLYQVAT 56
Query 61 GILSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAG 120
GILS GDIAP TRL+LR+QKN +VLLGEV IDL+ QTVTS+L++ TVTP+DSLIVAAG
Sbjct 57 GILSVGDIAPATRLVLRKQKNAQVLLGEVETIDLENQTVTSRLLERVTVTPFDSLIVAAG 116
Query 121 AQQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGP 180
A QSYFGND+FA FAPGMKTIDDALELRGRILGAFE AE+S D AER R LTFVVVGAGP
Sbjct 117 AGQSYFGNDQFAEFAPGMKTIDDALELRGRILGAFEQAELSDDPAERARLLTFVVVGAGP 176
Query 181 TGVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMD 240
TGVE+AGQI EL+ RTL GAFR I P E RV+LLD APAVLP G KL KA LEK+
Sbjct 177 TGVELAGQIAELSRRTLDGAFRKIDPREARVVLLDGAPAVLPVYGGKLSRKAAETLEKLG 236
Query 241 VEVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDR 300
VE+QL+AMVT VD G+ I+EKDG RRIE CKVW+AGV ASPLGK +AE S G E DR
Sbjct 237 VEIQLDAMVTDVDNDGLIIREKDGTLRRIESQCKVWSAGVQASPLGKQLAEQSGG-ETDR 295
Query 301 AGRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPAN 360
AGRV+V PDL++ GHPNVFV+GD+M + +PG+AQ A+QG +YA IK + G P+
Sbjct 296 AGRVMVNPDLSLPGHPNVFVIGDMMSLDKLPGLAQVAMQGGKYAAKQIKASLDGK-SPSE 354
Query 361 RKPFHYFNKGSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWG 420
R PF YF+KGSMATISR SAVA+VGKLE +G+ W+AWL +HL+YLVG+R+R + L +W
Sbjct 355 RVPFKYFDKGSMATISRFSAVAKVGKLEISGFIGWVAWLAIHLLYLVGFRSRASTLLSWA 414
Query 421 ISFMGRARGQMAITSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEAAG 470
++F GR R QMA T Q ++AR M +E++ + A + + ++AAG
Sbjct 415 VTFFGRGRAQMASTEQQVFARNAMGELEKKNKEATESGSTSNGEAKKAAG 464
>gi|145223934|ref|YP_001134612.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Mycobacterium
gilvum PYR-GCK]
gi|315444266|ref|YP_004077145.1| NADH dehydrogenase, FAD-containing subunit [Mycobacterium sp.
Spyr1]
gi|145216420|gb|ABP45824.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Mycobacterium
gilvum PYR-GCK]
gi|315262569|gb|ADT99310.1| NADH dehydrogenase, FAD-containing subunit [Mycobacterium sp.
Spyr1]
Length=457
Score = 602 bits (1553), Expect = 3e-170, Method: Compositional matrix adjust.
Identities = 296/438 (68%), Positives = 356/438 (82%), Gaps = 2/438 (0%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RH+VVIIGSGFGGL AAKALK+ADVDI +I++TT HLFQPLLYQVATGI+SEG+IAP TR
Sbjct 11 RHKVVIIGSGFGGLTAAKALKKADVDIKMIARTTHHLFQPLLYQVATGIISEGEIAPATR 70
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
+ILR QKN +VLLG+V IDLK TV S+L+ T +TP+DSLIVAAGA QSYFGND FA
Sbjct 71 VILRNQKNAQVLLGDVTRIDLKTNTVRSELLGHTYITPFDSLIVAAGAGQSYFGNDHFAE 130
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
+APGMK+IDDALELRGRILG+FE AE S+D A RE+ LTFVVVGAGPTGVE+AGQI ELA
Sbjct 131 WAPGMKSIDDALELRGRILGSFEQAERSSDPARREKLLTFVVVGAGPTGVEMAGQIAELA 190
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
+ TL GAFR I ++ RVILLDAAPAVLPPMG KLG +AQ+RLEKM VE+QLNAMVT VD
Sbjct 191 DHTLKGAFRHIDSTKARVILLDAAPAVLPPMGEKLGKQAQKRLEKMGVEIQLNAMVTDVD 250
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
GIT+K+ DG RRIE ACKVW+AGV+ASPLG+ +A+ S G E+DRAGRV V PDL++
Sbjct 251 RNGITVKDPDGTMRRIEAACKVWSAGVSASPLGRDLADQS-GVELDRAGRVKVLPDLSIP 309
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
GHPNVFVVGD+ V VPG+AQGAIQG RYA I +KG + + R+PF YF+KGSMA
Sbjct 310 GHPNVFVVGDMAAVEDVPGMAQGAIQGGRYAAKAIAAGLKGA-EVSEREPFKYFDKGSMA 368
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
T+SR SAVA++G LEF G+ AWL+WLVLHLVYLVG++ +I L +W ++F+ RGQ+ I
Sbjct 369 TVSRFSAVAKIGPLEFGGFIAWLSWLVLHLVYLVGFKTKIVTLLSWTVTFLSTKRGQLTI 428
Query 434 TSQMIYARLVMTLMEQQA 451
T Q YAR+ + +E+ A
Sbjct 429 TEQQAYARIRLEELEEIA 446
>gi|312139795|ref|YP_004007131.1| NADH dehydrogenase [Rhodococcus equi 103S]
gi|325676753|ref|ZP_08156426.1| NADH dehydrogenase [Rhodococcus equi ATCC 33707]
gi|311889134|emb|CBH48447.1| putative secreted NADH dehydrogenase [Rhodococcus equi 103S]
gi|325552301|gb|EGD21990.1| NADH dehydrogenase [Rhodococcus equi ATCC 33707]
Length=457
Score = 601 bits (1550), Expect = 8e-170, Method: Compositional matrix adjust.
Identities = 292/444 (66%), Positives = 356/444 (81%), Gaps = 2/444 (0%)
Query 7 EPSAVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEG 66
PSA GRHRVV+IGSGFGGL A +ALKRADVDITL+++TT HLFQPLLYQVATGILS G
Sbjct 3 NPSARPGRHRVVVIGSGFGGLFATQALKRADVDITLVARTTHHLFQPLLYQVATGILSVG 62
Query 67 DIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYF 126
DIAP TR++LR+QKNV VLLG+V +IDL A VTS+L++ TVT +DSLIVAAGA QSYF
Sbjct 63 DIAPATRMVLRKQKNVEVLLGDVESIDLAAGKVTSRLLERETVTEFDSLIVAAGAGQSYF 122
Query 127 GNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVA 186
GND FA FAPGMKTIDDALELRGRILGAFE AE+S D ER R LTFVVVGAGPTGVE+A
Sbjct 123 GNDHFAEFAPGMKTIDDALELRGRILGAFEQAELSDDPEERRRLLTFVVVGAGPTGVEMA 182
Query 187 GQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLN 246
GQI ELA RTLAGAFR I P + RVIL+D APAVLP G KL KA RLEK+ VE+QLN
Sbjct 183 GQIAELANRTLAGAFRRIDPRDARVILVDGAPAVLPVYGGKLSRKAAERLEKLGVEIQLN 242
Query 247 AMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIV 306
AMVT VD G+ +K+KDG E RIE CKVW+AGV ASPLG+ + E + G E+DRAGRV V
Sbjct 243 AMVTNVDVNGLVVKDKDGNETRIEAQCKVWSAGVQASPLGRQLGEQT-GAEVDRAGRVHV 301
Query 307 EPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHY 366
PDLT+ G+PNVFV+GD+M + +PG+AQ A+QG +YA I+ + G P +R+PF Y
Sbjct 302 NPDLTLPGYPNVFVIGDMMSLDKLPGLAQVAMQGGKYAAKEIRAGLDGA-QPQDRQPFKY 360
Query 367 FNKGSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGR 426
F+KGSMATISRHSAVA+VGKLE +G+ W+ WLV+HL+YL+G+R+R++ + +W +SF+GR
Sbjct 361 FDKGSMATISRHSAVAKVGKLEISGFIGWIMWLVIHLMYLIGFRSRLSTVISWTVSFLGR 420
Query 427 ARGQMAITSQMIYARLVMTLMEQQ 450
R QMA T Q ++AR + ++++Q
Sbjct 421 GRAQMASTEQQVFARNAIDVLQEQ 444
>gi|326384950|ref|ZP_08206624.1| NADH dehydrogenase (ubiquinone) [Gordonia neofelifaecis NRRL
B-59395]
gi|326196340|gb|EGD53540.1| NADH dehydrogenase (ubiquinone) [Gordonia neofelifaecis NRRL
B-59395]
Length=475
Score = 601 bits (1549), Expect = 9e-170, Method: Compositional matrix adjust.
Identities = 298/472 (64%), Positives = 362/472 (77%), Gaps = 7/472 (1%)
Query 3 LSSGEPSAVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGI 62
++S +++ R +VVIIGSGFGGL AA+ LK+ADVD+TLI+KTT HLFQP+LYQVATGI
Sbjct 1 MTSSPATSLRRRRQVVIIGSGFGGLFAAQRLKKADVDVTLIAKTTHHLFQPMLYQVATGI 60
Query 63 LSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQ 122
++EG+IAP TR++LR+QKN RVLLGEV IDLK Q V S+L++ T T YD LI+AAGA
Sbjct 61 IAEGEIAPATRVVLRKQKNTRVLLGEVFDIDLKTQVVRSQLLERVTETAYDDLIIAAGAD 120
Query 123 QSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTG 182
QSYFGND FA +APGMKTID ALELRGRILGAFE AE+S D AE+++ LTFVV+GAGPTG
Sbjct 121 QSYFGNDHFAEYAPGMKTIDHALELRGRILGAFEQAELSDDPAEQQKLLTFVVIGAGPTG 180
Query 183 VEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVE 242
VE+AGQI E++E+TL GAFR I P++ +VILLDA+PAVLPP GPKLG KA+RRLE + V+
Sbjct 181 VELAGQIAEMSEKTLKGAFRNIDPTDAKVILLDASPAVLPPFGPKLGEKAKRRLESLGVD 240
Query 243 VQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAG 302
VQL AMVT +DY G+T+KEKDG RRIE CKVW+AGV AS LGK++A+ SD T +DRAG
Sbjct 241 VQLGAMVTDLDYDGLTVKEKDGSTRRIESQCKVWSAGVQASSLGKVLADQSD-TRLDRAG 299
Query 303 RVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRK 362
RV V PDLT+ GHPNVFVVGD+M V GVPGVAQGAIQG RYA I ++ P RK
Sbjct 300 RVQVGPDLTIPGHPNVFVVGDMMAVDGVPGVAQGAIQGGRYAADAILAEMRKGQTPDQRK 359
Query 363 PFHYFNKGSMATISRHSAVAQV------GKLEFAGYFAWLAWLVLHLVYLVGYRNRIAAL 416
PF YF+KGSMAT+SR SAV QV K E GY AWL WL LHLVYLVG+RNR+ +
Sbjct 360 PFSYFDKGSMATVSRFSAVMQVPIPGTSKKFETEGYIAWLGWLALHLVYLVGFRNRLNTI 419
Query 417 FAWGISFMGRARGQMAITSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEA 468
W +F R R Q+A+T Q +YAR +T + + LA A +AE Q+A
Sbjct 420 INWFFAFNSRGRTQLAVTEQQVYARSALTELSYLERLRLAEAAKAEEGGQQA 471
>gi|333990583|ref|YP_004523197.1| NADH dehydrogenase Ndh [Mycobacterium sp. JDM601]
gi|333486551|gb|AEF35943.1| NADH dehydrogenase Ndh [Mycobacterium sp. JDM601]
Length=461
Score = 598 bits (1541), Expect = 7e-169, Method: Compositional matrix adjust.
Identities = 294/448 (66%), Positives = 357/448 (80%), Gaps = 2/448 (0%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RH+VVIIGSGFGGL AAK LKRADVD+ LI++TT HLFQPLLYQVATGILSEG+IAP+TR
Sbjct 14 RHQVVIIGSGFGGLTAAKKLKRADVDVKLIARTTHHLFQPLLYQVATGILSEGEIAPSTR 73
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
++LR+Q+N +VLLG+V IDL + VTS+++ T TP+DSLI+AAGA QSYFGND+FA
Sbjct 74 VVLRKQRNAQVLLGDVTHIDLAGKYVTSEVLGHTYDTPFDSLIIAAGAGQSYFGNDQFAE 133
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
FAPGMKTIDDALELRGRIL AFE AE S D A RE+ LTF VVGAGPTGVE+AGQI ELA
Sbjct 134 FAPGMKTIDDALELRGRILSAFEQAERSRDQARREKLLTFTVVGAGPTGVEMAGQIAELA 193
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
TL GAFR I ++ RVILLDAAPAVLPPMG KLGLKA RL+KM VE+QL AMVT VD
Sbjct 194 NYTLKGAFRNIDSTKARVILLDAAPAVLPPMGEKLGLKAAERLQKMGVEIQLGAMVTDVD 253
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
G+T+K+ DG RRIE CKVW+AGV+ASPLG+ +AE S E+DRAGRV V PDL+V
Sbjct 254 RNGLTVKDSDGTIRRIESQCKVWSAGVSASPLGRDLAEQS-AVELDRAGRVKVLPDLSVP 312
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
GHPNVFVVGD+ V GVPG+AQGAIQGA++A + IK + G DPA+R+PF Y +KGSMA
Sbjct 313 GHPNVFVVGDMAAVDGVPGMAQGAIQGAKHAASTIKAEL-GGADPADREPFQYLDKGSMA 371
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
T+SR SAV ++G LEF+G+ AWLAWL LHL+YLVG++N+++ L +W ++F+ RGQ+ I
Sbjct 372 TVSRFSAVTKIGPLEFSGFLAWLAWLGLHLIYLVGFKNKVSTLLSWNVTFLSTRRGQLTI 431
Query 434 TSQMIYARLVMTLMEQQAQGALAAAEQA 461
T Q +AR + +E A A AE+A
Sbjct 432 TEQQAFARTRLEQLEVLAAEAQRGAERA 459
>gi|169629515|ref|YP_001703164.1| NADH dehydrogenase (NDH) [Mycobacterium abscessus ATCC 19977]
gi|169241482|emb|CAM62510.1| Probable NADH dehydrogenase (NDH) [Mycobacterium abscessus]
Length=484
Score = 597 bits (1539), Expect = 2e-168, Method: Compositional matrix adjust.
Identities = 292/440 (67%), Positives = 350/440 (80%), Gaps = 2/440 (0%)
Query 10 AVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIA 69
A+ +HRVVIIGSGFGGL AAK LKRA+ D+TLI++TT HLFQPLLYQVATGI+SEG+IA
Sbjct 25 ALTPKHRVVIIGSGFGGLTAAKTLKRANADVTLIARTTHHLFQPLLYQVATGIISEGEIA 84
Query 70 PTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGND 129
P TR IL+ Q N +V+LG+V +IDL+ Q V S L+ TPYDSLIVAAGA QSYFGND
Sbjct 85 PPTRQILKDQDNAQVVLGDVTSIDLEKQVVHSSLLGHDYSTPYDSLIVAAGAGQSYFGND 144
Query 130 EFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQI 189
FA +APGMK+IDDALELRGRILGAFE AE S+D R + +TF VVGAGPTGVE+AGQI
Sbjct 145 HFAEWAPGMKSIDDALELRGRILGAFEQAERSSDPVRRRKLMTFTVVGAGPTGVEMAGQI 204
Query 190 VELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMV 249
ELA TL G FR I P++ RVILLDAAPAVLPP GPKLG KA++RLEK+ VE+QL+AMV
Sbjct 205 AELANETLKGTFRHIDPTDARVILLDAAPAVLPPFGPKLGDKARKRLEKLGVEIQLSAMV 264
Query 250 TAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPD 309
T VD G+T+K DG RIE CKVW+AGV+ASPLGK +AE S G E+DRAGRV V PD
Sbjct 265 TDVDRNGLTVKHADGSIERIESWCKVWSAGVSASPLGKNLAEQS-GVELDRAGRVKVGPD 323
Query 310 LTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNK 369
L++ GHPNVFVVGD+M V GVPGVAQGAIQG RYA IK +KG PA R PF +F+K
Sbjct 324 LSIPGHPNVFVVGDMMAVDGVPGVAQGAIQGGRYAAKQIKAELKGR-SPAERAPFKFFDK 382
Query 370 GSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARG 429
GSMAT+SR+SAV ++GK+EF+G+ AWL+WL LHLVYLVG++NR+ L W I+F+ R+RG
Sbjct 383 GSMATVSRYSAVVKIGKIEFSGFIAWLSWLALHLVYLVGFKNRLVTLILWSIAFVTRSRG 442
Query 430 QMAITSQMIYARLVMTLMEQ 449
QMAIT Q +AR + +E+
Sbjct 443 QMAITEQQAWARTRLDQLEE 462
>gi|41407659|ref|NP_960495.1| hypothetical protein MAP1561c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118463906|ref|YP_882053.1| DoxD family protein/pyridine nucleotide-disulfide oxidoreductase
[Mycobacterium avium 104]
gi|41396012|gb|AAS03878.1| Ndh [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118165193|gb|ABK66090.1| DoxD family protein/pyridine nucleotide-disulfide oxidoreductase
[Mycobacterium avium 104]
gi|336457609|gb|EGO36614.1| NADH dehydrogenase, FAD-containing subunit [Mycobacterium avium
subsp. paratuberculosis S397]
Length=461
Score = 590 bits (1521), Expect = 2e-166, Method: Compositional matrix adjust.
Identities = 301/469 (65%), Positives = 359/469 (77%), Gaps = 8/469 (1%)
Query 1 MTLSSGEPSAVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVAT 60
M+ SG + RH+VVIIGSGFGGLNAAK LK A+VDI LI++TT HLFQPLLYQVAT
Sbjct 1 MSPHSGSTAGPERRHQVVIIGSGFGGLNAAKKLKHANVDIKLIARTTHHLFQPLLYQVAT 60
Query 61 GILSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAG 120
GI+SEGDIAP TR++LRRQ+NV+VLLG+V IDL + V S L+ T TPYD+LIVAAG
Sbjct 61 GIVSEGDIAPPTRVVLRRQRNVQVLLGDVTHIDLAGKFVVSDLLGHTYETPYDTLIVAAG 120
Query 121 AQQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGP 180
A QSYFGND FA FAPGMK+IDDALE+RGRIL AFE AE S D R + LTF V+GAGP
Sbjct 121 AGQSYFGNDHFAEFAPGMKSIDDALEVRGRILSAFEQAERSRDPERRAKLLTFTVIGAGP 180
Query 181 TGVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMD 240
TGVE+AGQI ELA TL G+FR I P++ RVILLDAAPAVLPP G KLG +A RLEKM
Sbjct 181 TGVEMAGQIAELATYTLKGSFRHIDPTKARVILLDAAPAVLPPFGDKLGKRAADRLEKMG 240
Query 241 VEVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDR 300
VE+QL AMVT VD GIT+K+ DG RRIE ACKVW+AGV+ASPLG+ +AE S E+DR
Sbjct 241 VEIQLGAMVTDVDRNGITVKDSDGTVRRIESACKVWSAGVSASPLGRDLAEQST-VELDR 299
Query 301 AGRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPAN 360
AGRV V PDL++ GHPNVFV+GDL V GVPGVAQGAIQGA+Y IK + G DPA
Sbjct 300 AGRVKVLPDLSIPGHPNVFVIGDLAAVEGVPGVAQGAIQGAKYVANTIKAEL-GGADPAE 358
Query 361 RKPFHYFNKGSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWG 420
R+PF YF+KGSMAT+SR SAVA++G LEF+G FAW AWLVLHLVYLVG++ +++ L +W
Sbjct 359 REPFQYFDKGSMATVSRFSAVAKIGPLEFSGLFAWFAWLVLHLVYLVGFKTKVSTLLSWT 418
Query 421 ISFMGRARGQMAITSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEAA 469
++F+ RGQ+ IT Q +AR T +EQ A+ AAE A + A+
Sbjct 419 VTFLSTRRGQLTITEQQAFAR---TRLEQL---AVLAAETKRPAARRAS 461
>gi|111024206|ref|YP_707178.1| NADH dehydrogenase [Rhodococcus jostii RHA1]
gi|110823736|gb|ABG99020.1| NADH dehydrogenase [Rhodococcus jostii RHA1]
Length=464
Score = 590 bits (1521), Expect = 2e-166, Method: Compositional matrix adjust.
Identities = 295/457 (65%), Positives = 366/457 (81%), Gaps = 2/457 (0%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RHRVV+IGSGFGGL +ALK ADVDIT+I++TT HLFQPLLYQVATGILS GDIAP TR
Sbjct 10 RHRVVVIGSGFGGLFGTQALKNADVDITMIARTTHHLFQPLLYQVATGILSVGDIAPATR 69
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
L+LR+QKN +VLLG+V+ IDL+A+T+TS+ +D TTVTPYDSLIVAAGA QSYFGND F+
Sbjct 70 LVLRKQKNTKVLLGDVDKIDLEAKTITSRFLDRTTVTPYDSLIVAAGAGQSYFGNDHFSE 129
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
FAPGMKTIDDALELRGRILGAFE AE+S+D AER R LTFVVVGAGPTGVE+AGQI EL+
Sbjct 130 FAPGMKTIDDALELRGRILGAFEQAELSSDPAERARLLTFVVVGAGPTGVELAGQIAELS 189
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
RTL+GAFR I P E RVILLD A VLP G KL KA+++LEK+ +E+QL AMV VD
Sbjct 190 RRTLSGAFRNIDPREARVILLDGADDVLPVYGGKLSRKARQQLEKLGIEIQLGAMVVDVD 249
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
G+ +K+KDG +RRIE CKVW+AGV ASPLGK IAE SD EIDRAGRV+V+PDL+V
Sbjct 250 VDGLVVKDKDGTQRRIESQCKVWSAGVQASPLGKQIAEQSD-AEIDRAGRVLVKPDLSVP 308
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
GHP VFV+GD+M + +PG+AQ A+QG +YA I+ + G+ P +R PF YF+KGSMA
Sbjct 309 GHPEVFVIGDMMALDKLPGLAQVAMQGGKYAAKQIQAGLSGH-KPEDRPPFKYFDKGSMA 367
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
TISR SAVA+VGKLE +G+ W+AWL +HL+YLVG+R+R++ L +W ++F+GR R QMA
Sbjct 368 TISRFSAVAKVGKLEISGFIGWVAWLAIHLMYLVGFRSRLSTLLSWTVTFLGRGRAQMAS 427
Query 434 TSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEAAG 470
T Q ++AR M +E+ + AA + + A+++AAG
Sbjct 428 TEQWVFARNAMEQLERHEREKEAAEKSSGGAQRKAAG 464
>gi|118618416|ref|YP_906748.1| NADH dehydrogenase Ndh [Mycobacterium ulcerans Agy99]
gi|183982734|ref|YP_001851025.1| NADH dehydrogenase Ndh [Mycobacterium marinum M]
gi|118570526|gb|ABL05277.1| NADH dehydrogenase Ndh [Mycobacterium ulcerans Agy99]
gi|183176060|gb|ACC41170.1| NADH dehydrogenase Ndh [Mycobacterium marinum M]
Length=461
Score = 589 bits (1518), Expect = 4e-166, Method: Compositional matrix adjust.
Identities = 298/453 (66%), Positives = 352/453 (78%), Gaps = 7/453 (1%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RHRVVIIGSGFGGLNAAK LKRADVDI LI++TT HLFQPLLYQVATGI+SEGDIAP TR
Sbjct 14 RHRVVIIGSGFGGLNAAKKLKRADVDIKLIARTTHHLFQPLLYQVATGIISEGDIAPPTR 73
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
++LRRQ+N +VLLG V IDL Q+V S L+ T TPYD+LIVAAGA QSYFGND FA
Sbjct 74 VVLRRQRNAQVLLGNVTHIDLAKQSVVSDLLGHTYETPYDTLIVAAGAGQSYFGNDHFAE 133
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
FAPGMK+IDDALELRGRIL AFE AE S D R + LTF VVGAGPTGVE+AGQI ELA
Sbjct 134 FAPGMKSIDDALELRGRILSAFEQAERSRDAERRAKLLTFTVVGAGPTGVEMAGQIAELA 193
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
E TL GAFR I + RVILLDAAPAVLPP G KLG +A RL+K+ VE+QL AMVT VD
Sbjct 194 EHTLKGAFRHIDSTRARVILLDAAPAVLPPFGDKLGERAAARLQKLGVEIQLGAMVTDVD 253
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
GIT+K+ DG RRIE ACKVW+AGV AS LG+ +AE S+ E+DRAGRV V PDL+V
Sbjct 254 RNGITVKDSDGTIRRIESACKVWSAGVQASRLGRDLAEQSE-VELDRAGRVQVLPDLSVP 312
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
GHPNVFV+GD+ V GVPGVAQGAIQGA+Y T IK + G + A R+PF YF+KGSMA
Sbjct 313 GHPNVFVIGDMAAVEGVPGVAQGAIQGAKYVATTIKSELAGA-NAAEREPFQYFDKGSMA 371
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
T+SR SAVA++G +E +G+ AWLAWLVLHLVYLVG++ +++ L +W ++F+ RGQ+ I
Sbjct 372 TVSRFSAVAKIGPVEISGFIAWLAWLVLHLVYLVGFKTKVSTLLSWTVTFLSTRRGQLTI 431
Query 434 TSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQ 466
T Q +AR T +EQ A+ LA+ Q+ A Q
Sbjct 432 TEQQAFAR---TRLEQLAE--LASEAQSTEARQ 459
>gi|15608991|ref|NP_216370.1| NADH dehydrogenase [Mycobacterium tuberculosis H37Rv]
gi|15841322|ref|NP_336359.1| NADH dehydrogenase [Mycobacterium tuberculosis CDC1551]
gi|148661660|ref|YP_001283183.1| NADH dehydrogenase Ndh [Mycobacterium tuberculosis H37Ra]
44 more sequence titles
Length=463
Score = 589 bits (1518), Expect = 4e-166, Method: Compositional matrix adjust.
Identities = 297/454 (66%), Positives = 356/454 (79%), Gaps = 11/454 (2%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RHRVVIIGSGFGGLNAAK LKRADVDI LI++TT HLFQPLLYQVATGI+SEG+IAP TR
Sbjct 14 RHRVVIIGSGFGGLNAAKKLKRADVDIKLIARTTHHLFQPLLYQVATGIISEGEIAPPTR 73
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
++LR+Q+NV+VLLG V IDL Q V S+L+ T TPYDSLIVAAGA QSYFGND FA
Sbjct 74 VVLRKQRNVQVLLGNVTHIDLAGQCVVSELLGHTYQTPYDSLIVAAGAGQSYFGNDHFAE 133
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
FAPGMK+IDDALELRGRIL AFE AE S+D R + LTF VVGAGPTGVE+AGQI ELA
Sbjct 134 FAPGMKSIDDALELRGRILSAFEQAERSSDPERRAKLLTFTVVGAGPTGVEMAGQIAELA 193
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
E TL GAFR I ++ RVILLDAAPAVLPPMG KLG +A RL+K+ VE+QL AMVT VD
Sbjct 194 EHTLKGAFRHIDSTKARVILLDAAPAVLPPMGAKLGQRAAARLQKLGVEIQLGAMVTDVD 253
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
GIT+K+ DG RRIE ACKVW+AGV+AS LG+ +AE S E+DRAGRV V PDL++
Sbjct 254 RNGITVKDSDGTVRRIESACKVWSAGVSASRLGRDLAEQSR-VELDRAGRVQVLPDLSIP 312
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
G+PNVFVVGD+ V GVPGVAQGAIQGA+Y + IK + G +PA R+PF YF+KGSMA
Sbjct 313 GYPNVFVVGDMAAVEGVPGVAQGAIQGAKYVASTIKAELAGA-NPAEREPFQYFDKGSMA 371
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
T+SR SAVA++G +EF+G+ AWL WLVLHL YL+G++ +I L +W ++F+ RGQ+ I
Sbjct 372 TVSRFSAVAKIGPVEFSGFIAWLIWLVLHLAYLIGFKTKITTLLSWTVTFLSTRRGQLTI 431
Query 434 TSQMIYARLVMTLMEQ------QAQGALAAAEQA 461
T Q +AR T +EQ +AQG+ A+A+ A
Sbjct 432 TDQQAFAR---TRLEQLAELAAEAQGSAASAKVA 462
>gi|289574536|ref|ZP_06454763.1| NADH dehydrogenase ndh [Mycobacterium tuberculosis K85]
gi|289538967|gb|EFD43545.1| NADH dehydrogenase ndh [Mycobacterium tuberculosis K85]
Length=463
Score = 588 bits (1517), Expect = 5e-166, Method: Compositional matrix adjust.
Identities = 296/454 (66%), Positives = 356/454 (79%), Gaps = 11/454 (2%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RHRVVIIGSGFGGLNAAK LKRADVDI LI++TT HLFQPLLYQVATGI+SEG+IAP TR
Sbjct 14 RHRVVIIGSGFGGLNAAKKLKRADVDIKLIARTTHHLFQPLLYQVATGIISEGEIAPPTR 73
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
++LR+Q+NV+VLLG V IDL Q V S+L+ T TPYDSLI+AAGA QSYFGND FA
Sbjct 74 VVLRKQRNVQVLLGNVTHIDLAGQCVVSELLGHTYQTPYDSLIIAAGAGQSYFGNDHFAE 133
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
FAPGMK+IDDALELRGRIL AFE AE S+D R + LTF VVGAGPTGVE+AGQI ELA
Sbjct 134 FAPGMKSIDDALELRGRILSAFEQAERSSDPERRAKLLTFTVVGAGPTGVEMAGQIAELA 193
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
E TL GAFR I ++ RVILLDAAPAVLPPMG KLG +A RL+K+ VE+QL AMVT VD
Sbjct 194 EHTLKGAFRHIDSTKARVILLDAAPAVLPPMGAKLGQRAAARLQKLGVEIQLGAMVTDVD 253
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
GIT+K+ DG RRIE ACKVW+AGV+AS LG+ +AE S E+DRAGRV V PDL++
Sbjct 254 RNGITVKDSDGTVRRIESACKVWSAGVSASRLGRDLAEQSR-VELDRAGRVQVLPDLSIP 312
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
G+PNVFVVGD+ V GVPGVAQGAIQGA+Y + IK + G +PA R+PF YF+KGSMA
Sbjct 313 GYPNVFVVGDMAAVEGVPGVAQGAIQGAKYVASTIKAELAGA-NPAEREPFQYFDKGSMA 371
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
T+SR SAVA++G +EF+G+ AWL WLVLHL YL+G++ +I L +W ++F+ RGQ+ I
Sbjct 372 TVSRFSAVAKIGPVEFSGFIAWLIWLVLHLAYLIGFKTKITTLLSWTVTFLSTRRGQLTI 431
Query 434 TSQMIYARLVMTLMEQ------QAQGALAAAEQA 461
T Q +AR T +EQ +AQG+ A+A+ A
Sbjct 432 TDQQAFAR---TRLEQLAELAAEAQGSAASAKVA 462
>gi|326903456|gb|EGE50389.1| NADH dehydrogenase ndh [Mycobacterium tuberculosis W-148]
Length=463
Score = 588 bits (1517), Expect = 6e-166, Method: Compositional matrix adjust.
Identities = 297/454 (66%), Positives = 356/454 (79%), Gaps = 11/454 (2%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RHRVVIIGSGFGGLNAAK LKRADVDI LI++TT HLFQPLLYQVATGI+SEG+IAP TR
Sbjct 14 RHRVVIIGSGFGGLNAAKKLKRADVDIKLIARTTHHLFQPLLYQVATGIISEGEIAPPTR 73
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
++LR+Q+NV+VLLG V IDL Q V S+L+ T TPYDSLIVAAGA QSYFGND FA
Sbjct 74 VVLRKQRNVQVLLGNVTHIDLAGQCVVSELLGHTYQTPYDSLIVAAGAGQSYFGNDHFAE 133
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
FAPGMK+IDDALELRGRIL AFE AE S+D R + LTF VVGAGPTGVE+AGQI ELA
Sbjct 134 FAPGMKSIDDALELRGRILSAFEQAERSSDPERRAKLLTFTVVGAGPTGVEMAGQIAELA 193
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
E TL GAFR I ++ RVILLDAAPAVLPPMG KLG +A RL+K+ VE+QL AMVT VD
Sbjct 194 EHTLKGAFRHIDSTKVRVILLDAAPAVLPPMGAKLGQRAAARLQKLGVEIQLGAMVTDVD 253
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
GIT+K+ DG RRIE ACKVW+AGV+AS LG+ +AE S E+DRAGRV V PDL++
Sbjct 254 RNGITVKDSDGTVRRIESACKVWSAGVSASRLGRDLAEQSR-VELDRAGRVQVLPDLSIP 312
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
G+PNVFVVGD+ V GVPGVAQGAIQGA+Y + IK + G +PA R+PF YF+KGSMA
Sbjct 313 GYPNVFVVGDMAAVEGVPGVAQGAIQGAKYVASTIKAELAGA-NPAEREPFQYFDKGSMA 371
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
T+SR SAVA++G +EF+G+ AWL WLVLHL YL+G++ +I L +W ++F+ RGQ+ I
Sbjct 372 TVSRFSAVAKIGPVEFSGFIAWLIWLVLHLAYLIGFKTKITTLLSWTVTFLSTRRGQLTI 431
Query 434 TSQMIYARLVMTLMEQ------QAQGALAAAEQA 461
T Q +AR T +EQ +AQG+ A+A+ A
Sbjct 432 TDQQAFAR---TRLEQLAELAAEAQGSAASAKVA 462
>gi|340626862|ref|YP_004745314.1| putative NADH dehydrogenase NDH [Mycobacterium canettii CIPT
140010059]
gi|340005052|emb|CCC44201.1| putative NADH dehydrogenase NDH [Mycobacterium canettii CIPT
140010059]
Length=463
Score = 588 bits (1516), Expect = 6e-166, Method: Compositional matrix adjust.
Identities = 297/454 (66%), Positives = 356/454 (79%), Gaps = 11/454 (2%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RHRVVIIGSGFGGLNAAK LKRADVDI LI++TT HLFQPLLYQVATGI+SEG+IAP TR
Sbjct 14 RHRVVIIGSGFGGLNAAKKLKRADVDIKLIARTTHHLFQPLLYQVATGIISEGEIAPPTR 73
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
++LR+Q+NV+VLLG V IDL Q V S+L+ T TPYDSLIVAAGA QSYFGND FA
Sbjct 74 VVLRKQRNVQVLLGNVTHIDLAGQCVVSELLGHTYQTPYDSLIVAAGAGQSYFGNDHFAE 133
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
FAPGMK+IDDALELRGRIL AFE AE S+D R + LTF VVGAGPTGVE+AGQI ELA
Sbjct 134 FAPGMKSIDDALELRGRILSAFEQAERSSDPERRAKLLTFTVVGAGPTGVEMAGQIAELA 193
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
E TL GAFR I ++ RVILLDAAPAVLPPMG KLG +A RL+K+ VE+QL AMVT VD
Sbjct 194 EHTLKGAFRHIDSTKARVILLDAAPAVLPPMGAKLGHRAAARLQKLGVEIQLGAMVTDVD 253
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
GIT+K+ DG RRIE ACKVW+AGV+AS LG+ +AE S E+DRAGRV V PDL++
Sbjct 254 RNGITVKDSDGTVRRIESACKVWSAGVSASRLGRDLAEQSR-VELDRAGRVQVLPDLSIP 312
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
G+PNVFVVGD+ V GVPGVAQGAIQGA+Y + IK + G +PA R+PF YF+KGSMA
Sbjct 313 GYPNVFVVGDMAAVEGVPGVAQGAIQGAKYVASTIKAELAGA-NPAEREPFQYFDKGSMA 371
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
T+SR SAVA++G +EF+G+ AWL WLVLHL YL+G++ +I L +W ++F+ RGQ+ I
Sbjct 372 TVSRFSAVAKIGPVEFSGFIAWLIWLVLHLAYLIGFKTKITTLLSWTVTFLSTRRGQLTI 431
Query 434 TSQMIYARLVMTLMEQ------QAQGALAAAEQA 461
T Q +AR T +EQ +AQG+ A+A+ A
Sbjct 432 TDQQAFAR---TRLEQLAELAAEAQGSAASAKVA 462
>gi|254775343|ref|ZP_05216859.1| DoxD family protein/pyridine nucleotide-disulfide oxidoreductase
[Mycobacterium avium subsp. avium ATCC 25291]
Length=461
Score = 588 bits (1516), Expect = 7e-166, Method: Compositional matrix adjust.
Identities = 300/469 (64%), Positives = 358/469 (77%), Gaps = 8/469 (1%)
Query 1 MTLSSGEPSAVGGRHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVAT 60
M+ SG + RH+VVIIGSGFGGLNAAK LK A+VDI LI++TT HLFQPLLYQVAT
Sbjct 1 MSPHSGSTAGPERRHQVVIIGSGFGGLNAAKKLKHANVDIKLIARTTHHLFQPLLYQVAT 60
Query 61 GILSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAG 120
GI+SEGDIAP TR++LRRQ+NV+VLLG+V IDL + V S L+ T TPYD+LIVAAG
Sbjct 61 GIVSEGDIAPPTRVVLRRQRNVQVLLGDVTHIDLAGKFVVSDLLGHTYETPYDTLIVAAG 120
Query 121 AQQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGP 180
A QSYFGND FA FAPGMK+IDDALE+RGRIL AFE AE S D R + LTF V+GAGP
Sbjct 121 AGQSYFGNDHFAEFAPGMKSIDDALEVRGRILSAFEQAERSRDPERRAKLLTFTVIGAGP 180
Query 181 TGVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMD 240
TGVE+AGQI ELA TL G+FR I P++ RVILLDAAPAVLPP G KLG +A RLEKM
Sbjct 181 TGVEMAGQIAELATYTLKGSFRHIDPTKARVILLDAAPAVLPPFGDKLGKRAADRLEKMG 240
Query 241 VEVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDR 300
VE+QL AMVT VD GIT+K+ DG RRIE ACKVW+AGV+ASPLG+ +AE S E+DR
Sbjct 241 VEIQLGAMVTDVDRNGITVKDSDGTVRRIESACKVWSAGVSASPLGRDLAEQST-VELDR 299
Query 301 AGRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPAN 360
AGRV V PDL++ GHPNVFV+GDL V GVPGVAQGAIQGA+Y IK + G DPA
Sbjct 300 AGRVKVLPDLSIPGHPNVFVIGDLAAVEGVPGVAQGAIQGAKYVANTIKAEL-GGADPAE 358
Query 361 RKPFHYFNKGSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWG 420
R+PF YF+KGSMAT+SR SA A++G LEF+G FAW AWLVLHLVYLVG++ +++ L +W
Sbjct 359 REPFQYFDKGSMATVSRFSAAAKIGPLEFSGLFAWFAWLVLHLVYLVGFKTKVSTLLSWT 418
Query 421 ISFMGRARGQMAITSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEAA 469
++F+ RGQ+ IT Q +AR T +EQ A+ AAE A + A+
Sbjct 419 VTFLSTRRGQLTITEQQAFAR---TRLEQL---AVLAAETKRPAARRAS 461
>gi|31793044|ref|NP_855537.1| NADH dehydrogenase [Mycobacterium bovis AF2122/97]
gi|31618635|emb|CAD94588.1| PROBABLE NADH DEHYDROGENASE NDH [Mycobacterium bovis AF2122/97]
Length=463
Score = 587 bits (1514), Expect = 1e-165, Method: Compositional matrix adjust.
Identities = 297/454 (66%), Positives = 356/454 (79%), Gaps = 11/454 (2%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RHRVVIIGSGFGGLNAAK LKRADVDI LI++TT HLFQPLLYQVATGI+SEG+IAP TR
Sbjct 14 RHRVVIIGSGFGGLNAAKKLKRADVDIKLIARTTHHLFQPLLYQVATGIISEGEIAPPTR 73
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
++LR+Q+NV+VLLG V IDL Q V S+L+ T TPYDSLIVAAGA QSYFGND FA
Sbjct 74 VVLRKQRNVQVLLGNVTHIDLAGQCVVSELLGHTYQTPYDSLIVAAGAGQSYFGNDHFAE 133
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
FAPGMK+IDDALELRGRIL AFE AE S+D R + LTF VVGAGPTGVE+AGQI ELA
Sbjct 134 FAPGMKSIDDALELRGRILSAFEQAERSSDPERRAKLLTFTVVGAGPTGVEMAGQIAELA 193
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
E TL GAFR I ++ RVILLDAAPAVLPPMG KLG +A RL+K+ VE+QL AMVT VD
Sbjct 194 EHTLKGAFRHIDSTKARVILLDAAPAVLPPMGAKLGQRAAARLQKLGVEIQLGAMVTDVD 253
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
GIT+K+ DG RRIE ACKVW+AGV+AS LG+ +AE S E+DRAGRV V PDL++
Sbjct 254 RNGITVKDSDGTVRRIESACKVWSAGVSASWLGRDLAEQSR-VELDRAGRVQVLPDLSIP 312
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
G+PNVFVVGD+ V GVPGVAQGAIQGA+Y + IK + G +PA R+PF YF+KGSMA
Sbjct 313 GYPNVFVVGDMAAVEGVPGVAQGAIQGAKYVASTIKAELAGA-NPAEREPFQYFDKGSMA 371
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
T+SR SAVA++G +EF+G+ AWL WLVLHL YL+G++ +I L +W ++F+ RGQ+ I
Sbjct 372 TVSRFSAVAKIGPVEFSGFIAWLIWLVLHLAYLIGFKTKITTLLSWTVTFLSTRRGQLTI 431
Query 434 TSQMIYARLVMTLMEQ------QAQGALAAAEQA 461
T Q +AR T +EQ +AQG+ A+A+ A
Sbjct 432 TDQQAFAR---TRLEQLAELAAEAQGSAASAKVA 462
>gi|306779853|ref|ZP_07418190.1| NADH dehydrogenase ndh [Mycobacterium tuberculosis SUMu002]
gi|306788958|ref|ZP_07427280.1| NADH dehydrogenase ndh [Mycobacterium tuberculosis SUMu004]
gi|306793294|ref|ZP_07431596.1| NADH dehydrogenase ndh [Mycobacterium tuberculosis SUMu005]
11 more sequence titles
Length=463
Score = 587 bits (1513), Expect = 2e-165, Method: Compositional matrix adjust.
Identities = 296/454 (66%), Positives = 355/454 (79%), Gaps = 11/454 (2%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RHRV IIGSGFGGLNAAK LKRADVDI LI++TT HLFQPLLYQVATGI+SEG+IAP TR
Sbjct 14 RHRVAIIGSGFGGLNAAKKLKRADVDIKLIARTTHHLFQPLLYQVATGIISEGEIAPPTR 73
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
++LR+Q+NV+VLLG V IDL Q V S+L+ T TPYDSLIVAAGA QSYFGND FA
Sbjct 74 VVLRKQRNVQVLLGNVTHIDLAGQCVVSELLGHTYQTPYDSLIVAAGAGQSYFGNDHFAE 133
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
FAPGMK+IDDALELRGRIL AFE AE S+D R + LTF VVGAGPTGVE+AGQI ELA
Sbjct 134 FAPGMKSIDDALELRGRILSAFEQAERSSDPERRAKLLTFTVVGAGPTGVEMAGQIAELA 193
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
E TL GAFR I ++ RVILLDAAPAVLPPMG KLG +A RL+K+ VE+QL AMVT VD
Sbjct 194 EHTLKGAFRHIDSTKARVILLDAAPAVLPPMGAKLGQRAAARLQKLGVEIQLGAMVTDVD 253
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
GIT+K+ DG RRIE ACKVW+AGV+AS LG+ +AE S E+DRAGRV V PDL++
Sbjct 254 RNGITVKDSDGTVRRIESACKVWSAGVSASRLGRDLAEQSR-VELDRAGRVQVLPDLSIP 312
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
G+PNVFVVGD+ V GVPGVAQGAIQGA+Y + IK + G +PA R+PF YF+KGSMA
Sbjct 313 GYPNVFVVGDMAAVEGVPGVAQGAIQGAKYVASTIKAELAGA-NPAEREPFQYFDKGSMA 371
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
T+SR SAVA++G +EF+G+ AWL WLVLHL YL+G++ +I L +W ++F+ RGQ+ I
Sbjct 372 TVSRFSAVAKIGPVEFSGFIAWLIWLVLHLAYLIGFKTKITTLLSWTVTFLSTRRGQLTI 431
Query 434 TSQMIYARLVMTLMEQ------QAQGALAAAEQA 461
T Q +AR T +EQ +AQG+ A+A+ A
Sbjct 432 TDQQAFAR---TRLEQLAELAAEAQGSAASAKVA 462
>gi|121637757|ref|YP_977980.1| putative NADH dehydrogenase ndh [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224990241|ref|YP_002644928.1| putative NADH dehydrogenase [Mycobacterium bovis BCG str. Tokyo
172]
gi|121493404|emb|CAL71877.1| Probable NADH dehydrogenase ndh [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224773354|dbj|BAH26160.1| putative NADH dehydrogenase [Mycobacterium bovis BCG str. Tokyo
172]
gi|341601784|emb|CCC64458.1| probable NADH dehydrogenase ndh [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=463
Score = 586 bits (1510), Expect = 4e-165, Method: Compositional matrix adjust.
Identities = 296/454 (66%), Positives = 355/454 (79%), Gaps = 11/454 (2%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RHRVVIIGSGFGGLNAAK LKRADVDI LI++TT HLFQPLLYQVATGI+SEG+IAP TR
Sbjct 14 RHRVVIIGSGFGGLNAAKKLKRADVDIKLIARTTHHLFQPLLYQVATGIISEGEIAPPTR 73
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
++LR+Q+NV+VLLG V IDL Q V S+L+ T TPYDSLIVAAGA QSYFGND FA
Sbjct 74 VVLRKQRNVQVLLGNVTHIDLAGQCVVSELLGHTYQTPYDSLIVAAGAGQSYFGNDHFAE 133
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
FAPGMK+IDDALELRGRIL AFE AE S+D R + LTF VVGAGPTGVE+AGQI ELA
Sbjct 134 FAPGMKSIDDALELRGRILSAFEQAERSSDPERRAKLLTFTVVGAGPTGVEMAGQIAELA 193
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
E TL GAFR I ++ RVILLDAAPAVLPPMG KLG +A RL+K+ VE+QL AMVT VD
Sbjct 194 EHTLKGAFRHIDSTKARVILLDAAPAVLPPMGAKLGQRAAARLQKLGVEIQLGAMVTDVD 253
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
GIT+K+ DG RRIE ACKVW+AGV+AS LG+ +AE S E+DRAGRV V PDL++
Sbjct 254 RNGITVKDSDGTVRRIESACKVWSAGVSASRLGRDLAEQSR-VELDRAGRVQVLPDLSIP 312
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
+PNVFVVGD+ V GVPGVAQGAIQGA+Y + IK + G +PA R+PF YF+KGSMA
Sbjct 313 RYPNVFVVGDMAAVEGVPGVAQGAIQGAKYVASTIKAELAGA-NPAEREPFQYFDKGSMA 371
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
T+SR SAVA++G +EF+G+ AWL WLVLHL YL+G++ +I L +W ++F+ RGQ+ I
Sbjct 372 TVSRFSAVAKIGPVEFSGFIAWLIWLVLHLAYLIGFKTKITTLLSWTVTFLSTRRGQLTI 431
Query 434 TSQMIYARLVMTLMEQ------QAQGALAAAEQA 461
T Q +AR T +EQ +AQG+ A+A+ A
Sbjct 432 TDQQAFAR---TRLEQLAELAAEAQGSAASAKVA 462
>gi|342861249|ref|ZP_08717897.1| DoxD family protein/pyridine nucleotide-disulfide oxidoreductase
[Mycobacterium colombiense CECT 3035]
gi|342131149|gb|EGT84430.1| DoxD family protein/pyridine nucleotide-disulfide oxidoreductase
[Mycobacterium colombiense CECT 3035]
Length=461
Score = 585 bits (1509), Expect = 4e-165, Method: Compositional matrix adjust.
Identities = 299/468 (64%), Positives = 360/468 (77%), Gaps = 11/468 (2%)
Query 5 SGEPSAVGG---RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATG 61
S +P G RH+VVIIGSGFGGLNAAK LK A+VDI LI++TT HLFQPLLYQVATG
Sbjct 2 SPQPGTTAGPERRHQVVIIGSGFGGLNAAKKLKHANVDIKLIARTTHHLFQPLLYQVATG 61
Query 62 ILSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGA 121
I+SEGDIAP TR++LRRQ+NV+VLLG+V IDL+ + V S L+ T TPYDSLI+AAGA
Sbjct 62 IVSEGDIAPPTRVVLRRQRNVQVLLGDVTHIDLEGKFVVSDLLGHTYDTPYDSLIIAAGA 121
Query 122 QQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPT 181
QSYFGND FA FAPGMK+IDDALE+RGRIL AFE AE S D R + LTF V+GAGPT
Sbjct 122 GQSYFGNDHFAEFAPGMKSIDDALEVRGRILSAFEQAERSRDPERRAKLLTFTVIGAGPT 181
Query 182 GVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDV 241
GVE+AGQI ELA TL G+FR I ++ RVILLDAAPAVLPP G KLG +A RLEKM V
Sbjct 182 GVEMAGQIAELATYTLKGSFRHIDSTKARVILLDAAPAVLPPFGEKLGQRAAARLEKMGV 241
Query 242 EVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRA 301
E+QL AMVT VD GIT+K+ DG RRIE ACKVW+AGV+ASPLG+ +A+ S E+DRA
Sbjct 242 EIQLGAMVTDVDRNGITVKDSDGTVRRIESACKVWSAGVSASPLGRDLADQSS-VELDRA 300
Query 302 GRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANR 361
GRV V PDL+V GHPNVFV+GDL V GVPGVAQGAIQGA+Y + IK + G +PA+R
Sbjct 301 GRVKVLPDLSVPGHPNVFVIGDLAAVEGVPGVAQGAIQGAKYVASTIKAEL-GGANPADR 359
Query 362 KPFHYFNKGSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGI 421
+PF YF+KGSMAT+SR SAVA++G +EF+G FAW AWLVLHLVYLVG++ +I+ L +W +
Sbjct 360 EPFQYFDKGSMATVSRFSAVAKIGPVEFSGLFAWFAWLVLHLVYLVGFKTKISTLLSWTV 419
Query 422 SFMGRARGQMAITSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEAA 469
+F+ RGQ+ IT Q +AR T +EQ A+ AAE A + A+
Sbjct 420 TFLSTRRGQLTITEQQAFAR---TRLEQL---AVVAAEAKRPAARRAS 461
>gi|240172037|ref|ZP_04750696.1| DoxD family protein/pyridine nucleotide-disulfide oxidoreductase
[Mycobacterium kansasii ATCC 12478]
Length=461
Score = 584 bits (1506), Expect = 9e-165, Method: Compositional matrix adjust.
Identities = 294/438 (68%), Positives = 341/438 (78%), Gaps = 5/438 (1%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RHRVVIIGSGFGGLNAAK LKRADVDI LI++TT HLFQPLLYQVATGI+SEGDIAP TR
Sbjct 14 RHRVVIIGSGFGGLNAAKKLKRADVDIKLIARTTHHLFQPLLYQVATGIVSEGDIAPPTR 73
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
++LRRQ+NV+VLLG+V IDL Q V S L+ T TPYDSLIVAAGA QSYFGND FA
Sbjct 74 VVLRRQRNVQVLLGDVTHIDLAGQFVVSDLLGHTYETPYDSLIVAAGAGQSYFGNDHFAE 133
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
FAPGMK+IDDALE+RGRIL AFE AE S D R + LTF V+GAGPTGVE+AGQI ELA
Sbjct 134 FAPGMKSIDDALEVRGRILSAFEQAERSRDPERRAKLLTFTVIGAGPTGVEMAGQIAELA 193
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
TL G+FR I + RVILLDAAPAVLPP G KLG +A RLEKM VE+QL AMVT VD
Sbjct 194 SHTLKGSFRHIDSTRARVILLDAAPAVLPPFGEKLGQRAAARLEKMGVEIQLGAMVTDVD 253
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
GIT+K+ DG RRIE CKVW+AGV+AS LG +AE S E+DRAGRV V PDLT+
Sbjct 254 RNGITVKDSDGTIRRIESQCKVWSAGVSASALGHDLAEQSS-VELDRAGRVKVLPDLTIP 312
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
GHPNVFV+GD+ V GVPGVAQGAIQGA+YA IK + G DP R+PF YF+KGSMA
Sbjct 313 GHPNVFVIGDMAAVEGVPGVAQGAIQGAKYAAGTIKAELAGA-DPTQREPFQYFDKGSMA 371
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
T+SR SAVA+VG +EF+G AW AWLVLHLVYLVG++ +++ L +W ++F+ RGQ+ I
Sbjct 372 TVSRFSAVAKVGPVEFSGLIAWFAWLVLHLVYLVGFKTKVSTLLSWTVTFLSTRRGQLTI 431
Query 434 TSQMIYARLVMTLMEQQA 451
T Q +AR T +EQ A
Sbjct 432 TEQQAFAR---TRLEQLA 446
>gi|254821981|ref|ZP_05226982.1| DoxD family protein/pyridine nucleotide-disulfide oxidoreductase
[Mycobacterium intracellulare ATCC 13950]
Length=461
Score = 584 bits (1505), Expect = 1e-164, Method: Compositional matrix adjust.
Identities = 295/450 (66%), Positives = 351/450 (78%), Gaps = 8/450 (1%)
Query 5 SGEPSAVGG---RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATG 61
S +PS G RH+VVIIGSGFGGLNAAK LK A+VDI LI++TT HLFQPLLYQVATG
Sbjct 2 SPQPSNAAGPERRHQVVIIGSGFGGLNAAKKLKHANVDIKLIARTTHHLFQPLLYQVATG 61
Query 62 ILSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGA 121
I+SEGDIAP TR++LRRQ+NV+VLLG+V IDL + V S L+ T TPYDSLIVAAGA
Sbjct 62 IVSEGDIAPPTRVVLRRQRNVQVLLGDVTHIDLAGKFVVSDLLGHTYETPYDSLIVAAGA 121
Query 122 QQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPT 181
QSYFGND FA FAPGMK+IDDALE+RGRIL AFE AE S D R + LTF V+GAGPT
Sbjct 122 GQSYFGNDHFAEFAPGMKSIDDALEVRGRILSAFEQAERSRDPERRAKLLTFTVIGAGPT 181
Query 182 GVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDV 241
GVE+AGQI ELA TL G+FR I ++ RVILLDAAPAVLPP G KLG +A RLEKM V
Sbjct 182 GVEMAGQIAELATYTLKGSFRHIDSTKARVILLDAAPAVLPPFGDKLGQRAADRLEKMGV 241
Query 242 EVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRA 301
E+QL AMVT VD GIT+K+ DG RRIE ACKVW+AGV+ASPLG+ +A+ S E+DRA
Sbjct 242 EIQLGAMVTDVDRNGITVKDSDGTVRRIESACKVWSAGVSASPLGRDLADQST-VELDRA 300
Query 302 GRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANR 361
GRV V PDL+V GHP+VFV+GDL V GVPGVAQGAIQGA+Y + IK + G +PA R
Sbjct 301 GRVKVLPDLSVPGHPDVFVIGDLAAVEGVPGVAQGAIQGAKYVASTIKAELDGA-NPAER 359
Query 362 KPFHYFNKGSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGI 421
+PF YF+KGSMAT+SR SAVA++G +EF+G FAW AWLVLHLVYLVG++ +I+ L +W +
Sbjct 360 EPFQYFDKGSMATVSRFSAVAKIGPVEFSGLFAWFAWLVLHLVYLVGFKTKISTLLSWTV 419
Query 422 SFMGRARGQMAITSQMIYARLVMTLMEQQA 451
+F+ RGQ+ IT Q +AR T +EQ A
Sbjct 420 TFLSTRRGQLTITEQQAFAR---TRLEQLA 446
>gi|306784596|ref|ZP_07422918.1| NADH dehydrogenase ndh [Mycobacterium tuberculosis SUMu003]
gi|308330640|gb|EFP19491.1| NADH dehydrogenase ndh [Mycobacterium tuberculosis SUMu003]
Length=462
Score = 582 bits (1501), Expect = 3e-164, Method: Compositional matrix adjust.
Identities = 296/454 (66%), Positives = 355/454 (79%), Gaps = 12/454 (2%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RHRV IIGSGFGGLNAAK LKRADVDI LI++TT HLFQPLLYQVATGI+SEG+IAP TR
Sbjct 14 RHRVAIIGSGFGGLNAAKKLKRADVDIKLIARTTHHLFQPLLYQVATGIISEGEIAPPTR 73
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
++LR+Q+NV+VLLG V IDL Q V S+L+ T TPYDSLIVAAGA QSYFGND FA
Sbjct 74 VVLRKQRNVQVLLGNVTHIDLAGQCVVSELLGHTYQTPYDSLIVAAGAGQSYFGNDHFAE 133
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
FAPGMK+IDDALELRGRIL AFE AE S+D R + LTF VVGAGPTGVE+AGQI ELA
Sbjct 134 FAPGMKSIDDALELRGRILSAFEQAERSSDPERRAKLLTFTVVGAGPTGVEMAGQIAELA 193
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
E TL GAFR I ++ RVILLDAAPAVLPPMG KLG +A RL+K+ VE+QL AMVT VD
Sbjct 194 EHTLKGAFRHIDSTKARVILLDAAPAVLPPMGAKLGQRAAARLQKLGVEIQLGAMVTDVD 253
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
GIT+K+ D G RRIE ACKVW+AGV+AS LG+ +AE S E+DRAGRV V PDL++
Sbjct 254 RNGITVKDSD-GIRRIESACKVWSAGVSASRLGRDLAEQSR-VELDRAGRVQVLPDLSIP 311
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
G+PNVFVVGD+ V GVPGVAQGAIQGA+Y + IK + G +PA R+PF YF+KGSMA
Sbjct 312 GYPNVFVVGDMAAVEGVPGVAQGAIQGAKYVASTIKAELAGA-NPAEREPFQYFDKGSMA 370
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
T+SR SAVA++G +EF+G+ AWL WLVLHL YL+G++ +I L +W ++F+ RGQ+ I
Sbjct 371 TVSRFSAVAKIGPVEFSGFIAWLIWLVLHLAYLIGFKTKITTLLSWTVTFLSTRRGQLTI 430
Query 434 TSQMIYARLVMTLMEQ------QAQGALAAAEQA 461
T Q +AR T +EQ +AQG+ A+A+ A
Sbjct 431 TDQQAFAR---TRLEQLAELAAEAQGSAASAKVA 461
>gi|167970333|ref|ZP_02552610.1| NADH dehydrogenase ndh [Mycobacterium tuberculosis H37Ra]
gi|254550864|ref|ZP_05141311.1| NADH dehydrogenase ndh [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|294996762|ref|ZP_06802453.1| NADH dehydrogenase ndh [Mycobacterium tuberculosis 210]
gi|297634414|ref|ZP_06952194.1| NADH dehydrogenase ndh [Mycobacterium tuberculosis KZN 4207]
gi|297731401|ref|ZP_06960519.1| NADH dehydrogenase ndh [Mycobacterium tuberculosis KZN R506]
gi|313658735|ref|ZP_07815615.1| NADH dehydrogenase ndh [Mycobacterium tuberculosis KZN V2475]
gi|339298416|gb|AEJ50526.1| NADH dehydrogenase [Mycobacterium tuberculosis CCDC5180]
Length=446
Score = 578 bits (1489), Expect = 8e-163, Method: Compositional matrix adjust.
Identities = 292/450 (65%), Positives = 352/450 (79%), Gaps = 11/450 (2%)
Query 18 VIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTRLILR 77
+IIGSGFGGLNAAK LKRADVDI LI++TT HLFQPLLYQVATGI+SEG+IAP TR++LR
Sbjct 1 MIIGSGFGGLNAAKKLKRADVDIKLIARTTHHLFQPLLYQVATGIISEGEIAPPTRVVLR 60
Query 78 RQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFATFAPG 137
+Q+NV+VLLG V IDL Q V S+L+ T TPYDSLIVAAGA QSYFGND FA FAPG
Sbjct 61 KQRNVQVLLGNVTHIDLAGQCVVSELLGHTYQTPYDSLIVAAGAGQSYFGNDHFAEFAPG 120
Query 138 MKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELAERTL 197
MK+IDDALELRGRIL AFE AE S+D R + LTF VVGAGPTGVE+AGQI ELAE TL
Sbjct 121 MKSIDDALELRGRILSAFEQAERSSDPERRAKLLTFTVVGAGPTGVEMAGQIAELAEHTL 180
Query 198 AGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVDYKGI 257
GAFR I ++ RVILLDAAPAVLPPMG KLG +A RL+K+ VE+QL AMVT VD GI
Sbjct 181 KGAFRHIDSTKARVILLDAAPAVLPPMGAKLGQRAAARLQKLGVEIQLGAMVTDVDRNGI 240
Query 258 TIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVKGHPN 317
T+K+ DG RRIE ACKVW+AGV+AS LG+ +AE S E+DRAGRV V PDL++ G+PN
Sbjct 241 TVKDSDGTVRRIESACKVWSAGVSASRLGRDLAEQSR-VELDRAGRVQVLPDLSIPGYPN 299
Query 318 VFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMATISR 377
VFVVGD+ V GVPGVAQGAIQGA+Y + IK + G +PA R+PF YF+KGSMAT+SR
Sbjct 300 VFVVGDMAAVEGVPGVAQGAIQGAKYVASTIKAELAGA-NPAEREPFQYFDKGSMATVSR 358
Query 378 HSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAITSQM 437
SAVA++G +EF+G+ AWL WLVLHL YL+G++ +I L +W ++F+ RGQ+ IT Q
Sbjct 359 FSAVAKIGPVEFSGFIAWLIWLVLHLAYLIGFKTKITTLLSWTVTFLSTRRGQLTITDQQ 418
Query 438 IYARLVMTLMEQ------QAQGALAAAEQA 461
+AR T +EQ +AQG+ A+A+ A
Sbjct 419 AFAR---TRLEQLAELAAEAQGSAASAKVA 445
>gi|15828111|ref|NP_302374.1| dehydrogenase [Mycobacterium leprae TN]
gi|221230588|ref|YP_002504004.1| putative dehydrogenase [Mycobacterium leprae Br4923]
gi|2578371|emb|CAA15447.1| dehydrogenase [Mycobacterium leprae]
gi|13093665|emb|CAC31016.1| possible dehydrogenase [Mycobacterium leprae]
gi|219933695|emb|CAR72158.1| possible dehydrogenase [Mycobacterium leprae Br4923]
Length=466
Score = 574 bits (1480), Expect = 1e-161, Method: Compositional matrix adjust.
Identities = 292/467 (63%), Positives = 358/467 (77%), Gaps = 10/467 (2%)
Query 5 SGEPSAVGG---RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATG 61
+ +P+A RH+VVIIGSGFGGLNAAK LKRA+VDI LI++TT HLFQPLLYQVATG
Sbjct 2 NAQPAATAAQDRRHQVVIIGSGFGGLNAAKKLKRANVDIKLIARTTHHLFQPLLYQVATG 61
Query 62 ILSEGDIAPTTRLILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGA 121
I+SEG+IAP TR++LR+Q+N++VLLG V IDL Q V S+L+ T T YDSLIVAAGA
Sbjct 62 IISEGEIAPPTRVVLRKQRNIQVLLGNVTHIDLANQCVVSELLGHTYETLYDSLIVAAGA 121
Query 122 QQSYFGNDEFATFAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPT 181
QSYFGND+FA FAPGMK+IDDALELRGRIL AFE AE S D RE+ LTF VVGAGPT
Sbjct 122 GQSYFGNDQFAEFAPGMKSIDDALELRGRILSAFEQAERSNDPERREKLLTFTVVGAGPT 181
Query 182 GVEVAGQIVELAERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDV 241
GVE+AGQI ELA+ TL GAFR I ++ RV+LLDAAPAVLPPMG KLG +A RL+KM V
Sbjct 182 GVEMAGQIAELADHTLKGAFRRIDSTKARVVLLDAAPAVLPPMGEKLGQRAAARLQKMGV 241
Query 242 EVQLNAMVTAVDYKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRA 301
E+QL+AMVT VD GIT+++ DG RRIE ACKVW+AGV+AS LG+ +AE S E+D A
Sbjct 242 EIQLSAMVTDVDRNGITVQDSDGTVRRIESACKVWSAGVSASRLGRDLAEQSL-VELDWA 300
Query 302 GRVIVEPDLTVKGHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANR 361
GRV V PDL++ G+ NVFVVGD+ + GVPGVAQGAIQGA+Y IK + G +PA R
Sbjct 301 GRVKVLPDLSIPGYRNVFVVGDMAAIDGVPGVAQGAIQGAKYVANNIKAEL-GEANPAER 359
Query 362 KPFHYFNKGSMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGI 421
+PF YF+KGSMAT+SR SAVA++G LEF+G+ AWL WLVLHL+YL+G++ +I L +W +
Sbjct 360 EPFQYFDKGSMATVSRFSAVAKIGPLEFSGFIAWLMWLVLHLMYLIGFKTKITTLLSWTV 419
Query 422 SFMGRARGQMAITSQMIYARLVMTLMEQQAQGALAAAEQAEHAEQEA 468
+F+ RGQ+ IT Q +AR T +EQ A+ L A Q+ A A
Sbjct 420 TFLSTRRGQLTITEQQAFAR---TRLEQLAE--LTAESQSTAAANRA 461
>gi|296164844|ref|ZP_06847402.1| NADH dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899810|gb|EFG79258.1| NADH dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=446
Score = 574 bits (1479), Expect = 1e-161, Method: Compositional matrix adjust.
Identities = 289/435 (67%), Positives = 342/435 (79%), Gaps = 5/435 (1%)
Query 17 VVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTRLIL 76
+VIIGSGFGGLNAAK LK ADVDI LI++TT HLFQPLLYQVATGI+SEGDIAP TR++L
Sbjct 1 MVIIGSGFGGLNAAKKLKHADVDIKLIARTTHHLFQPLLYQVATGIVSEGDIAPPTRVVL 60
Query 77 RRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFATFAP 136
RRQ+NV+VLLG+V IDL + V S L+ T TPYDSLI+AAGA QSYFGND FA FAP
Sbjct 61 RRQRNVQVLLGDVTHIDLARKFVVSDLLGHTYETPYDSLIIAAGAGQSYFGNDHFAEFAP 120
Query 137 GMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELAERT 196
GMK+IDDALE+RGRIL AFE AE S D R + LTF V+GAGPTGVE+AGQI ELA T
Sbjct 121 GMKSIDDALEVRGRILSAFEQAERSRDPERRAKLLTFTVIGAGPTGVEMAGQIAELAAHT 180
Query 197 LAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVDYKG 256
L G+FR I ++ RVILLDAAPAVLPP G KLG +A+ RLEKM VE+QL AMVT VD G
Sbjct 181 LKGSFRGIDSTKARVILLDAAPAVLPPFGEKLGDRARARLEKMGVEIQLGAMVTDVDRNG 240
Query 257 ITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVKGHP 316
IT+K+ DG RRIE ACKVW+AGV AS LG+ +AE S E+DRAGRV V PDL+V GHP
Sbjct 241 ITVKDSDGTVRRIESACKVWSAGVQASGLGRDLAEQSS-VELDRAGRVKVLPDLSVPGHP 299
Query 317 NVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMATIS 376
NVFV+GD+ V GVPGVAQGAIQGA+Y +IK + G DPA R+PF YF+KGSMAT+S
Sbjct 300 NVFVIGDMAAVEGVPGVAQGAIQGAKYVAGMIKAEL-GGADPAEREPFQYFDKGSMATVS 358
Query 377 RHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAITSQ 436
R SAVA+VG LEF+G+ AWL WLVLHLVYLVG++ +++ L +W ++F+ RGQ+ IT Q
Sbjct 359 RFSAVAKVGPLEFSGFIAWLMWLVLHLVYLVGFKTKVSTLLSWTVTFLSTRRGQLTITEQ 418
Query 437 MIYARLVMTLMEQQA 451
+AR T +EQ A
Sbjct 419 QAFAR---TRLEQLA 430
>gi|333920782|ref|YP_004494363.1| NADH dehydrogenase [Amycolicicoccus subflavus DQS3-9A1]
gi|333483003|gb|AEF41563.1| NADH dehydrogenase [Amycolicicoccus subflavus DQS3-9A1]
Length=467
Score = 572 bits (1474), Expect = 5e-161, Method: Compositional matrix adjust.
Identities = 277/439 (64%), Positives = 348/439 (80%), Gaps = 4/439 (0%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RHRVV+IGSGFGGL A + LKRADV++TLI++TT HLFQPLLYQVATGILS G+IA TR
Sbjct 10 RHRVVVIGSGFGGLFATQKLKRADVEVTLIARTTHHLFQPLLYQVATGILSVGEIAAPTR 69
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
++LR+Q+N +VL+GEV ID+K QTVTS+ TTVT +DSLIVAAGA+QSYFGND FA
Sbjct 70 VVLRKQRNAQVLMGEVIDIDVKNQTVTSEQFGRTTVTGFDSLIVAAGAEQSYFGNDHFAK 129
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
FAPGMKT+D ALELRG+IL AFE AE+STD AE E+ LTFVVVGAGPTGVE+AGQI ELA
Sbjct 130 FAPGMKTVDHALELRGKILSAFELAELSTDPAEHEKLLTFVVVGAGPTGVEMAGQIAELA 189
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
TL G FR I P E R+ILLDAAP VLPP G KLG KA RRLEK+ VE+ LN VT VD
Sbjct 190 RDTLVGTFRHIDPGEARIILLDAAPQVLPPFGEKLGSKAHRRLEKLGVEIMLNTFVTDVD 249
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
GI IK+ +G ++RI CK+WAAGVAASPLGK++++ + GTEIDRAGRV+V+PDL+++
Sbjct 250 ENGIVIKDAEGNQQRITAYCKLWAAGVAASPLGKILSDQT-GTEIDRAGRVMVKPDLSIE 308
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGND--DPA-NRKPFHYFNKG 370
G+PN+FVVGD+M + +PGVAQ AIQG RYA IK +K +PA RKPF YFNKG
Sbjct 309 GNPNIFVVGDMMSLDKLPGVAQVAIQGGRYAAKTIKQELKAEKKGEPAPERKPFKYFNKG 368
Query 371 SMATISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQ 430
+MA +S++SAVAQVG++ +G+ WL WL +HLVY+VG+++R A LF+W ++F+ +R Q
Sbjct 369 NMAAVSKYSAVAQVGRINISGFLGWLMWLAVHLVYIVGFKSRAATLFSWTVTFLTNSRAQ 428
Query 431 MAITSQMIYARLVMTLMEQ 449
+ +T Q + ARL + +E+
Sbjct 429 LTVTEQWMTARLAIDHLEE 447
>gi|226359938|ref|YP_002777716.1| NADH dehydrogenase [Rhodococcus opacus B4]
gi|226238423|dbj|BAH48771.1| NADH dehydrogenase [Rhodococcus opacus B4]
Length=478
Score = 564 bits (1454), Expect = 1e-158, Method: Compositional matrix adjust.
Identities = 279/439 (64%), Positives = 333/439 (76%), Gaps = 1/439 (0%)
Query 14 RHRVVIIGSGFGGLNAAKALKRADVDITLISKTTTHLFQPLLYQVATGILSEGDIAPTTR 73
RH+VV+IGSGFGGL A + L RADVD+T+I +TTTHLFQPLLYQVATGILSEG+IAP+TR
Sbjct 11 RHKVVVIGSGFGGLFATQGLHRADVDVTIIDRTTTHLFQPLLYQVATGILSEGEIAPSTR 70
Query 74 LILRRQKNVRVLLGEVNAIDLKAQTVTSKLMDMTTVTPYDSLIVAAGAQQSYFGNDEFAT 133
+L+ Q N RVLLG V IDL AQTVTS+ D TTVT YDSLIV+AGAQQSYFGND FA
Sbjct 71 TVLKDQANARVLLGSVTDIDLAAQTVTSQCDDTTTVTRYDSLIVSAGAQQSYFGNDHFAE 130
Query 134 FAPGMKTIDDALELRGRILGAFEAAEVSTDHAERERRLTFVVVGAGPTGVEVAGQIVELA 193
APG+KTIDDALE RGRIL AFE AE+ D ER R+LTFVVVGAGPTGVE+AGQI ELA
Sbjct 131 HAPGLKTIDDALEARGRILHAFEKAELIDDPVERARQLTFVVVGAGPTGVELAGQIAELA 190
Query 194 ERTLAGAFRTITPSECRVILLDAAPAVLPPMGPKLGLKAQRRLEKMDVEVQLNAMVTAVD 253
RTL G FR+I+P+ RV+LLDAAP VLPP G KLG A R L+ VEV+L A+VT VD
Sbjct 191 HRTLDGTFRSISPTAARVVLLDAAPQVLPPFGAKLGTAATRTLQSKGVEVELGAIVTDVD 250
Query 254 YKGITIKEKDGGERRIECACKVWAAGVAASPLGKMIAEGSDGTEIDRAGRVIVEPDLTVK 313
G+T+K+ DG RRIE ACKVW+AGV+ASPL K +AE + G +DRAGR+ V DLT+
Sbjct 251 EHGLTVKDADGHTRRIEAACKVWSAGVSASPLAKQLAEQT-GAPLDRAGRISVGADLTLP 309
Query 314 GHPNVFVVGDLMFVPGVPGVAQGAIQGARYATTVIKHMVKGNDDPANRKPFHYFNKGSMA 373
G PNVFV+GD+M +PGVAQ AIQG RYA I G P +R PF Y +KGSMA
Sbjct 310 GQPNVFVIGDMMSRDQLPGVAQTAIQGGRYAARHIAREADGTSLPQDRAPFRYRDKGSMA 369
Query 374 TISRHSAVAQVGKLEFAGYFAWLAWLVLHLVYLVGYRNRIAALFAWGISFMGRARGQMAI 433
T+ R SAVAQVG+ EF+G+ AWL WL +HLVY+VG+R+RIA L +W SF+G RGQ+
Sbjct 370 TVCRFSAVAQVGRFEFSGFIAWLLWLAVHLVYIVGFRSRIATLLSWTSSFLGSGRGQLTT 429
Query 434 TSQMIYARLVMTLMEQQAQ 452
+ Q I AR +T + Q++
Sbjct 430 SEQQIRARSAVTSRQGQSE 448
Lambda K H
0.320 0.135 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 994746070878
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40