BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0399c Length=409 Score E Sequences producing significant alignments: (Bits) Value gi|15607540|ref|NP_214913.1| lipoprotein LpqK [Mycobacterium tub... 842 0.0 gi|298523873|ref|ZP_07011282.1| lipoprotein [Mycobacterium tuber... 841 0.0 gi|254549341|ref|ZP_05139788.1| putative lipoprotein [Mycobacter... 840 0.0 gi|289572984|ref|ZP_06453211.1| lipoprotein lpqK [Mycobacterium ... 838 0.0 gi|253797322|ref|YP_003030323.1| lipoprotein lpqK [Mycobacterium... 838 0.0 gi|289445937|ref|ZP_06435681.1| lipoprotein lpqK [Mycobacterium ... 837 0.0 gi|340625425|ref|YP_004743877.1| putative lipoprotein LPQK [Myco... 831 0.0 gi|183980719|ref|YP_001849010.1| lipoprotein, LpqK [Mycobacteriu... 686 0.0 gi|120404482|ref|YP_954311.1| beta-lactamase [Mycobacterium vanb... 563 2e-158 gi|111023689|ref|YP_706661.1| beta-lactamase [Rhodococcus jostii... 553 3e-155 gi|119869337|ref|YP_939289.1| beta-lactamase [Mycobacterium sp. ... 548 9e-154 gi|108800209|ref|YP_640406.1| beta-lactamase [Mycobacterium sp. ... 545 6e-153 gi|220909059|ref|YP_002484370.1| beta-lactamase [Cyanothece sp. ... 522 3e-146 gi|258652524|ref|YP_003201680.1| beta-lactamase [Nakamurella mul... 467 1e-129 gi|343924745|ref|ZP_08764284.1| hypothetical protein GOALK_026_0... 460 2e-127 gi|284993090|ref|YP_003411645.1| beta-lactamase [Geodermatophilu... 391 1e-106 gi|254430312|ref|ZP_05044015.1| beta-lactamase [Cyanobium sp. PC... 391 1e-106 gi|328887139|emb|CCA60378.1| beta-lactamase [Streptomyces venezu... 323 3e-86 gi|256389688|ref|YP_003111252.1| beta-lactamase [Catenulispora a... 287 2e-75 gi|301058486|ref|ZP_07199499.1| beta-lactamase [delta proteobact... 277 2e-72 gi|256391384|ref|YP_003112948.1| beta-lactamase [Catenulispora a... 248 1e-63 gi|111019589|ref|YP_702561.1| serine-type D-Ala-D-Ala carboxypep... 224 3e-56 gi|226362344|ref|YP_002780122.1| hypothetical protein ROP_29300 ... 207 4e-51 gi|229494236|ref|ZP_04387999.1| beta-lactamase [Rhodococcus eryt... 197 3e-48 gi|226304222|ref|YP_002764180.1| hypothetical protein RER_07330 ... 192 7e-47 gi|111023881|ref|YP_706853.1| serine-type D-Ala-D-Ala carboxypep... 164 3e-38 gi|291446827|ref|ZP_06586217.1| beta-lactamase [Streptomyces ros... 164 3e-38 gi|290958770|ref|YP_003489952.1| protease [Streptomyces scabiei ... 163 4e-38 gi|239989813|ref|ZP_04710477.1| beta-lactamase [Streptomyces ros... 163 4e-38 gi|229491451|ref|ZP_04385275.1| beta-lactamase [Rhodococcus eryt... 161 2e-37 gi|226363487|ref|YP_002781269.1| S12 family peptidase [Rhodococc... 160 3e-37 gi|169627434|ref|YP_001701083.1| beta-lactamase [Mycobacterium a... 160 5e-37 gi|254386227|ref|ZP_05001538.1| beta-lactamase [Streptomyces sp.... 160 5e-37 gi|226306056|ref|YP_002766016.1| S12 family peptidase [Rhodococc... 157 3e-36 gi|87302432|ref|ZP_01085249.1| possible conserved lipoprotein lp... 155 1e-35 gi|111021123|ref|YP_704095.1| penicillin-binding protein [Rhodoc... 154 4e-35 gi|297196916|ref|ZP_06914313.1| beta-lactamase [Streptomyces svi... 153 5e-35 gi|29829205|ref|NP_823839.1| beta-lactamase [Streptomyces avermi... 150 3e-34 gi|328886077|emb|CCA59316.1| Beta-lactamase class C and other pe... 150 5e-34 gi|254387017|ref|ZP_05002296.1| beta-lactamase [Streptomyces sp.... 149 8e-34 gi|226363068|ref|YP_002780850.1| S12 family peptidase [Rhodococc... 148 2e-33 gi|302535239|ref|ZP_07287581.1| beta-lactamase [Streptomyces sp.... 147 3e-33 gi|269928638|ref|YP_003320959.1| beta-lactamase [Sphaerobacter t... 145 1e-32 gi|118471628|ref|YP_885965.1| beta-lactamase [Mycobacterium smeg... 145 1e-32 gi|118472409|ref|YP_887685.1| beta-lactamase [Mycobacterium smeg... 143 4e-32 gi|302535493|ref|ZP_07287835.1| beta-lactamase [Streptomyces sp.... 143 6e-32 gi|311893876|dbj|BAJ26284.1| putative beta-lactamase [Kitasatosp... 142 7e-32 gi|284046611|ref|YP_003396951.1| beta-lactamase [Conexibacter wo... 142 8e-32 gi|240172313|ref|ZP_04750972.1| serine-type D-Ala-D-Ala carboxyp... 142 1e-31 gi|120404007|ref|YP_953836.1| Serine-type D-Ala-D-Ala carboxypep... 136 7e-30 >gi|15607540|ref|NP_214913.1| lipoprotein LpqK [Mycobacterium tuberculosis H37Rv] gi|15839782|ref|NP_334819.1| putative lipoprotein [Mycobacterium tuberculosis CDC1551] gi|31791575|ref|NP_854068.1| lipoprotein LpqK [Mycobacterium bovis AF2122/97] 55 more sequence titles Length=409 Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/409 (100%), Positives = 409/409 (100%), Gaps = 0/409 (0%) Query 1 MPVLRRLGCSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVR 60 MPVLRRLGCSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVR Sbjct 1 MPVLRRLGCSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVR 60 Query 61 VTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW 120 VTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW Sbjct 61 VTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW 120 Query 121 LPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLY 180 LPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLY Sbjct 121 LPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLY 180 Query 181 DPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA 240 DPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA Sbjct 181 DPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA 240 Query 241 FTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADS 300 FTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADS Sbjct 241 FTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADS 300 Query 301 YKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS 360 YKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS Sbjct 301 YKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS 360 Query 361 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPPGR 409 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPPGR Sbjct 361 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPPGR 409 >gi|298523873|ref|ZP_07011282.1| lipoprotein [Mycobacterium tuberculosis 94_M4241A] gi|298493667|gb|EFI28961.1| lipoprotein [Mycobacterium tuberculosis 94_M4241A] Length=409 Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/409 (99%), Positives = 408/409 (99%), Gaps = 0/409 (0%) Query 1 MPVLRRLGCSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVR 60 MPVLRRLGCSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVR Sbjct 1 MPVLRRLGCSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVR 60 Query 61 VTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW 120 VTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW Sbjct 61 VTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW 120 Query 121 LPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLY 180 LPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLY Sbjct 121 LPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLY 180 Query 181 DPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA 240 DPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA Sbjct 181 DPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA 240 Query 241 FTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADS 300 FTSERRAALKIPAGVPFYEESTFWNPSWTITHG IQTTTIYDMEATAVGIGSGRLLSADS Sbjct 241 FTSERRAALKIPAGVPFYEESTFWNPSWTITHGTIQTTTIYDMEATAVGIGSGRLLSADS 300 Query 301 YKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS 360 YKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS Sbjct 301 YKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS 360 Query 361 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPPGR 409 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPPGR Sbjct 361 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPPGR 409 >gi|254549341|ref|ZP_05139788.1| putative lipoprotein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289760513|ref|ZP_06519891.1| lipoprotein lpqK [Mycobacterium tuberculosis GM 1503] gi|289708019|gb|EFD72035.1| lipoprotein lpqK [Mycobacterium tuberculosis GM 1503] Length=409 Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/409 (99%), Positives = 409/409 (100%), Gaps = 0/409 (0%) Query 1 MPVLRRLGCSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVR 60 MPVLRRLGCSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVR Sbjct 1 MPVLRRLGCSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVR 60 Query 61 VTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW 120 VTVAGK+VVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW Sbjct 61 VTVAGKKVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW 120 Query 121 LPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLY 180 LPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLY Sbjct 121 LPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLY 180 Query 181 DPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA 240 DPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA Sbjct 181 DPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA 240 Query 241 FTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADS 300 FTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADS Sbjct 241 FTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADS 300 Query 301 YKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS 360 YKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS Sbjct 301 YKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS 360 Query 361 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPPGR 409 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPPGR Sbjct 361 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPPGR 409 >gi|289572984|ref|ZP_06453211.1| lipoprotein lpqK [Mycobacterium tuberculosis K85] gi|339630468|ref|YP_004722110.1| hypothetical protein MAF_04010 [Mycobacterium africanum GM041182] gi|289537415|gb|EFD41993.1| lipoprotein lpqK [Mycobacterium tuberculosis K85] gi|339329824|emb|CCC25473.1| putative conserved lipoprotein LPQK [Mycobacterium africanum GM041182] Length=409 Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/409 (99%), Positives = 408/409 (99%), Gaps = 0/409 (0%) Query 1 MPVLRRLGCSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVR 60 MPVLRRLGCSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVR Sbjct 1 MPVLRRLGCSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVR 60 Query 61 VTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW 120 VTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW Sbjct 61 VTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW 120 Query 121 LPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLY 180 LPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLY Sbjct 121 LPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLY 180 Query 181 DPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA 240 DPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA Sbjct 181 DPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA 240 Query 241 FTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADS 300 FTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADS Sbjct 241 FTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADS 300 Query 301 YKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS 360 YKKMVST LRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS Sbjct 301 YKKMVSTGLRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS 360 Query 361 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPPGR 409 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPPGR Sbjct 361 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPPGR 409 >gi|253797322|ref|YP_003030323.1| lipoprotein lpqK [Mycobacterium tuberculosis KZN 1435] gi|289552648|ref|ZP_06441858.1| lipoprotein lpqK [Mycobacterium tuberculosis KZN 605] gi|297632881|ref|ZP_06950661.1| lipoprotein lpqK [Mycobacterium tuberculosis KZN 4207] gi|297729856|ref|ZP_06958974.1| lipoprotein lpqK [Mycobacterium tuberculosis KZN R506] gi|313657185|ref|ZP_07814065.1| lipoprotein lpqK [Mycobacterium tuberculosis KZN V2475] gi|253318825|gb|ACT23428.1| lipoprotein lpqK [Mycobacterium tuberculosis KZN 1435] gi|289437280|gb|EFD19773.1| lipoprotein lpqK [Mycobacterium tuberculosis KZN 605] gi|328457109|gb|AEB02532.1| lipoprotein lpqK [Mycobacterium tuberculosis KZN 4207] Length=409 Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/409 (99%), Positives = 408/409 (99%), Gaps = 0/409 (0%) Query 1 MPVLRRLGCSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVR 60 MPVLRRLGCSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVR Sbjct 1 MPVLRRLGCSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVR 60 Query 61 VTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW 120 VTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW Sbjct 61 VTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW 120 Query 121 LPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLY 180 LPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLY Sbjct 121 LPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLY 180 Query 181 DPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA 240 DPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA Sbjct 181 DPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA 240 Query 241 FTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADS 300 FTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIG GRLLSADS Sbjct 241 FTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGWGRLLSADS 300 Query 301 YKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS 360 YKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS Sbjct 301 YKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS 360 Query 361 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPPGR 409 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPPGR Sbjct 361 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPPGR 409 >gi|289445937|ref|ZP_06435681.1| lipoprotein lpqK [Mycobacterium tuberculosis CPHL_A] gi|289418895|gb|EFD16096.1| lipoprotein lpqK [Mycobacterium tuberculosis CPHL_A] Length=409 Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/409 (99%), Positives = 408/409 (99%), Gaps = 0/409 (0%) Query 1 MPVLRRLGCSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVR 60 MPVLRRLGCSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVR Sbjct 1 MPVLRRLGCSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVR 60 Query 61 VTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW 120 VTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW Sbjct 61 VTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW 120 Query 121 LPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLY 180 LPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLY Sbjct 121 LPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLY 180 Query 181 DPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA 240 DPGTNWNYA TNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA Sbjct 181 DPGTNWNYAPTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA 240 Query 241 FTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADS 300 FTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADS Sbjct 241 FTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADS 300 Query 301 YKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS 360 YKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS Sbjct 301 YKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS 360 Query 361 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPPGR 409 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPPGR Sbjct 361 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPPGR 409 >gi|340625425|ref|YP_004743877.1| putative lipoprotein LPQK [Mycobacterium canettii CIPT 140010059] gi|340003615|emb|CCC42737.1| putative conserved lipoprotein LPQK [Mycobacterium canettii CIPT 140010059] Length=409 Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/409 (99%), Positives = 405/409 (99%), Gaps = 0/409 (0%) Query 1 MPVLRRLGCSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVR 60 MPVLRR GCSVLALGLLAGCAPPRTGPASSPTN GAKADAVIRIVRDFMTQAHL+AVLVR Sbjct 1 MPVLRRFGCSVLALGLLAGCAPPRTGPASSPTNTGAKADAVIRIVRDFMTQAHLRAVLVR 60 Query 61 VTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW 120 VTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW Sbjct 61 VTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW 120 Query 121 LPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLY 180 LPDFPHADRVTLGQLAQMTSGYPDYVLGN+AFDAELYANPFRQWTTQELLDQISSRPLLY Sbjct 121 LPDFPHADRVTLGQLAQMTSGYPDYVLGNDAFDAELYANPFRQWTTQELLDQISSRPLLY 180 Query 181 DPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA 240 DPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA Sbjct 181 DPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA 240 Query 241 FTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADS 300 FTSERR ALKIPAGVPFYEESTFWNPSWTIT GAIQTTTIYDMEATAVGIGSGRLLSADS Sbjct 241 FTSERRGALKIPAGVPFYEESTFWNPSWTITRGAIQTTTIYDMEATAVGIGSGRLLSADS 300 Query 301 YKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS 360 YKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS Sbjct 301 YKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS 360 Query 361 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPPGR 409 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPPGR Sbjct 361 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPPGR 409 >gi|183980719|ref|YP_001849010.1| lipoprotein, LpqK [Mycobacterium marinum M] gi|183174045|gb|ACC39155.1| conserved lipoprotein, LpqK [Mycobacterium marinum M] Length=413 Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/413 (80%), Positives = 368/413 (90%), Gaps = 4/413 (0%) Query 1 MPVLRRLGCSVLALGLLAGCA---PPRTGPA-SSPTNNGAKADAVIRIVRDFMTQAHLKA 56 MP+LRR+ V + LLAGCA PP+ A + P G KADAV+++VRDFM AHL++ Sbjct 1 MPILRRVAGVVFGVCLLAGCAALHPPQQSSAPTGPDGKGTKADAVMKVVRDFMGPAHLRS 60 Query 57 VLVRVTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDK 116 V+VRV+V GKE+VT AVGDSMTGVPA+T MHFRNGAVAISYVATLLLKLVDE KL LDDK Sbjct 61 VIVRVSVDGKEIVTDAVGDSMTGVPASTDMHFRNGAVAISYVATLLLKLVDEHKLSLDDK 120 Query 117 LSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSR 176 LS+WLPDFPHADRVTLGQLAQMTSGYPDYVLGN+ F LYA+PFRQWT QELL QISSR Sbjct 121 LSKWLPDFPHADRVTLGQLAQMTSGYPDYVLGNDEFGDALYADPFRQWTPQELLAQISSR 180 Query 177 PLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEP 236 PLLY+PGTNWNYAHTNY+LLGLALEKA GQDM TLL++KVL+PLGLTATANS+TP+IP+P Sbjct 181 PLLYEPGTNWNYAHTNYVLLGLALEKATGQDMATLLKQKVLAPLGLTATANSETPSIPDP 240 Query 237 ALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLL 296 ALHAF++ERRA LKIPA PF EESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSG+LL Sbjct 241 ALHAFSAERRAFLKIPADTPFSEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGKLL 300 Query 297 SADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEA 356 SADSY+KMVST LRGKTRAQP CPTCFEQ++GY+YGLGIVISGHWLLQNP+F+GYAA EA Sbjct 301 SADSYQKMVSTALRGKTRAQPDCPTCFEQSEGYTYGLGIVISGHWLLQNPLFSGYAATEA 360 Query 357 YLPSQRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPPGR 409 YLPSQRVA+AVA+TY PEAFDD+GNY NQADILFRKI A + P+DAPPMPPGR Sbjct 361 YLPSQRVAIAVALTYTPEAFDDEGNYPNQADILFRKIAAALVPDDAPPMPPGR 413 >gi|120404482|ref|YP_954311.1| beta-lactamase [Mycobacterium vanbaalenii PYR-1] gi|119957300|gb|ABM14305.1| beta-lactamase [Mycobacterium vanbaalenii PYR-1] Length=409 Score = 563 bits (1451), Expect = 2e-158, Method: Compositional matrix adjust. Identities = 275/397 (70%), Positives = 320/397 (81%), Gaps = 0/397 (0%) Query 1 MPVLRRLGCSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVR 60 M VLRRL + + L A P + +P + AKADAV+RIVR+ M +AHLKAV+VR Sbjct 1 MTVLRRLAAACILPILAACAPPAVAPDSDAPKADPAKADAVMRIVRETMAEAHLKAVIVR 60 Query 61 VTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW 120 VTV G+EV+T A G+SMTGVPA TAMHFRNGAVAISYVATLLLKL +E + LDDKLS W Sbjct 61 VTVDGREVLTEAAGESMTGVPANTAMHFRNGAVAISYVATLLLKLAEEGTVSLDDKLSTW 120 Query 121 LPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLY 180 LP PHADRVTL QLAQMTSGY DYV+G A + A+PFR WTT +LL +S+PLLY Sbjct 121 LPRIPHADRVTLRQLAQMTSGYVDYVIGTTAMNDAFLADPFRAWTTHDLLSYATSKPLLY 180 Query 181 DPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA 240 +PGTNWNYAHTNY+LLGLALEKA G+ M LL KVL PLGLT TA S T IP P LHA Sbjct 181 EPGTNWNYAHTNYVLLGLALEKATGETMSDLLSDKVLRPLGLTDTAASLTADIPSPVLHA 240 Query 241 FTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADS 300 FTSERR AL+IP PFYEESTFWNPSWTITHGAIQTT IYD+EATAVGIGSGRLL +S Sbjct 241 FTSERREALRIPPDTPFYEESTFWNPSWTITHGAIQTTNIYDLEATAVGIGSGRLLKPES 300 Query 301 YKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS 360 Y++MVST+LRGKTR+QPGC TC ++ Y+YGLG+VISG+WLLQNPMFAGYA VEAYLP+ Sbjct 301 YRQMVSTDLRGKTRSQPGCATCRPMDERYTYGLGVVISGNWLLQNPMFAGYAGVEAYLPA 360 Query 361 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEV 397 Q++A+AVA T+APEAFDD G+YRN+A+ LFR+IGAE+ Sbjct 361 QKIAIAVATTFAPEAFDDSGDYRNEAETLFRRIGAEM 397 >gi|111023689|ref|YP_706661.1| beta-lactamase [Rhodococcus jostii RHA1] gi|110823219|gb|ABG98503.1| possible beta-lactamase [Rhodococcus jostii RHA1] Length=418 Score = 553 bits (1424), Expect = 3e-155, Method: Compositional matrix adjust. Identities = 261/373 (70%), Positives = 310/373 (84%), Gaps = 0/373 (0%) Query 36 AKADAVIRIVRDFMTQAHLKAVLVRVTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAI 95 A+ADAV++IVRD M ++HLKAV+VRVTV GKE+VT+A+G+SMTGVPATT MHFRNGAVAI Sbjct 46 AQADAVMKIVRDTMAESHLKAVIVRVTVDGKEIVTQALGESMTGVPATTDMHFRNGAVAI 105 Query 96 SYVATLLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAE 155 SYV+TLLL+LVDEKK+ LDD +S+WLPD PHADRVTL QLAQMTSGY DYV+GN FD+ Sbjct 106 SYVSTLLLQLVDEKKVSLDDTVSKWLPDIPHADRVTLRQLAQMTSGYVDYVIGNTEFDSA 165 Query 156 LYANPFRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRK 215 LYA PFR WT +ELL +S PLLY+PGTNWNYAHTNY++LGL LEK GQ M L+Q + Sbjct 166 LYAAPFRNWTPEELLAFATSEPLLYEPGTNWNYAHTNYVILGLVLEKITGQPMTELMQDE 225 Query 216 VLSPLGLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAI 275 VL PLGL T + T AIPEP LHAF+SERR AL+IP G PFYEEST+WNPSWTITHGAI Sbjct 226 VLGPLGLDDTTDPGTAAIPEPVLHAFSSERREALQIPPGAPFYEESTYWNPSWTITHGAI 285 Query 276 QTTTIYDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGI 335 Q T IYD+ TAV IG+G LLS +SY+ MVST+LRGKT A PGC TCF Q++ Y+YGLG+ Sbjct 286 QITNIYDLHDTAVAIGTGELLSPESYEAMVSTDLRGKTTALPGCTTCFPQSEDYTYGLGL 345 Query 336 VISGHWLLQNPMFAGYAAVEAYLPSQRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGA 395 I G WL+QNP+F+G +AVEAYLPSQ++AVA+AVTY P AFDD G Y+N+AD LFRKIGA Sbjct 346 PIVGTWLMQNPLFSGSSAVEAYLPSQKIAVAIAVTYEPAAFDDTGAYKNEADRLFRKIGA 405 Query 396 EVAPNDAPPMPPG 408 +AP +APP+ G Sbjct 406 HLAPTEAPPVAVG 418 >gi|119869337|ref|YP_939289.1| beta-lactamase [Mycobacterium sp. KMS] gi|126435832|ref|YP_001071523.1| beta-lactamase [Mycobacterium sp. JLS] gi|119695426|gb|ABL92499.1| beta-lactamase [Mycobacterium sp. KMS] gi|126235632|gb|ABN99032.1| beta-lactamase [Mycobacterium sp. JLS] Length=403 Score = 548 bits (1411), Expect = 9e-154, Method: Compositional matrix adjust. Identities = 274/406 (68%), Positives = 319/406 (79%), Gaps = 4/406 (0%) Query 1 MPVLRRLGCSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVR 60 MP RR+ ++ L L+ C T +ADAV+RIV D M AHLKA +VR Sbjct 1 MPDPRRIVGTLAVLLLVTAC----TTADPPDPGPDPRADAVMRIVNDTMADAHLKAAIVR 56 Query 61 VTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW 120 VT G E+VTRAVG+SMTGVPAT MHFRNGAVAISYVATLLL L ++ + LDD+LSRW Sbjct 57 VTEDGDEIVTRAVGESMTGVPATADMHFRNGAVAISYVATLLLLLAEDGTVSLDDRLSRW 116 Query 121 LPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLY 180 LPD PHADRVTLGQLAQMTSGY DYVLGN+AF YA+PFR +TT +LLD +PL Y Sbjct 117 LPDVPHADRVTLGQLAQMTSGYHDYVLGNDAFADAAYADPFRAYTTDDLLDFAVHKPLQY 176 Query 181 DPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA 240 +PGTNW+YAHTNY+LLGLALEKA G+ M LL KVL PLGLT T S T IPEPALHA Sbjct 177 EPGTNWSYAHTNYVLLGLALEKATGRSMTDLLDEKVLRPLGLTGTRASLTAEIPEPALHA 236 Query 241 FTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADS 300 +TSERR AL+IP G FYEEST+WNPSWTITHGAIQT TI D+EATAVGIGSG+LLS DS Sbjct 237 YTSERRQALRIPDGTSFYEESTYWNPSWTITHGAIQTATIADLEATAVGIGSGKLLSPDS 296 Query 301 YKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS 360 Y++MVST+LRG+TRAQPGCPTC D Y+YG+GIVISG WLLQNPMF+GY +EAYLP+ Sbjct 297 YRRMVSTDLRGRTRAQPGCPTCMPMTDRYTYGIGIVISGDWLLQNPMFSGYGGLEAYLPA 356 Query 361 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMP 406 +++A+AVAVT+APEAFD QGNY N A LF +I AE+AP+DAPP+P Sbjct 357 RKLAIAVAVTFAPEAFDAQGNYTNAAQTLFSRIAAELAPDDAPPVP 402 >gi|108800209|ref|YP_640406.1| beta-lactamase [Mycobacterium sp. MCS] gi|108770628|gb|ABG09350.1| beta-lactamase [Mycobacterium sp. MCS] Length=387 Score = 545 bits (1404), Expect = 6e-153, Method: Compositional matrix adjust. Identities = 266/370 (72%), Positives = 307/370 (83%), Gaps = 0/370 (0%) Query 37 KADAVIRIVRDFMTQAHLKAVLVRVTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAIS 96 +ADAV+RIV D M AHLKA +VRVT G E+VTRAVG+SMTGVPAT MHFRNGAVAIS Sbjct 17 RADAVMRIVNDTMADAHLKAAIVRVTEDGDEIVTRAVGESMTGVPATADMHFRNGAVAIS 76 Query 97 YVATLLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAEL 156 YVATLLL L ++ + LDD+LSRWLPD PHADRVTLGQLAQMTSGY DYVLGN+AF Sbjct 77 YVATLLLLLAEDGTVSLDDRLSRWLPDVPHADRVTLGQLAQMTSGYHDYVLGNDAFADAA 136 Query 157 YANPFRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKV 216 YA+PFR +TT +LLD +PL Y+PGTNW+YAHTNY+LLGLALEKA G+ M LL KV Sbjct 137 YADPFRAYTTDDLLDFAVHKPLQYEPGTNWSYAHTNYVLLGLALEKATGRSMTDLLDEKV 196 Query 217 LSPLGLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQ 276 L PLGLT T S T IPEPALHA+TSERR AL+IP G FYEEST+WNPSWTITHGAIQ Sbjct 197 LRPLGLTGTRASLTAEIPEPALHAYTSERRQALRIPDGTSFYEESTYWNPSWTITHGAIQ 256 Query 277 TTTIYDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIV 336 T TI D+EATAVGIGSG+LLS DSY++MVST+LRG+TRAQPGCPTC D Y+YG+GIV Sbjct 257 TATIADLEATAVGIGSGKLLSPDSYRRMVSTDLRGRTRAQPGCPTCMPMTDRYTYGIGIV 316 Query 337 ISGHWLLQNPMFAGYAAVEAYLPSQRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAE 396 ISG WLLQNPMF+GY +EAYLP++++A+AVAVT+APEAFD QGNY N A LF +I AE Sbjct 317 ISGDWLLQNPMFSGYGGLEAYLPARKLAIAVAVTFAPEAFDAQGNYTNAAQTLFSRIAAE 376 Query 397 VAPNDAPPMP 406 +AP+DAPP+P Sbjct 377 LAPDDAPPVP 386 >gi|220909059|ref|YP_002484370.1| beta-lactamase [Cyanothece sp. PCC 7425] gi|219865670|gb|ACL46009.1| beta-lactamase [Cyanothece sp. PCC 7425] Length=422 Score = 522 bits (1345), Expect = 3e-146, Method: Compositional matrix adjust. Identities = 242/370 (66%), Positives = 302/370 (82%), Gaps = 1/370 (0%) Query 36 AKADAVIRIVRDFMTQAHLKAVLVRVTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAI 95 ++A+ V ++V D M HLKAV+VRVTV GKE++T A G+SM+GV ATT MHFRNGAVAI Sbjct 51 SQANIVRQVVLDGMADGHLKAVIVRVTVDGKEILTEAFGESMSGVKATTDMHFRNGAVAI 110 Query 96 SYVATLLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAE 155 SYV+TLLL+LVDEKK+ L+DK+++WLP PH+DRVTLGQLAQMTSGY DYV N AF Sbjct 111 SYVSTLLLQLVDEKKVSLNDKVAKWLPHLPHSDRVTLGQLAQMTSGYADYV-QNPAFVTA 169 Query 156 LYANPFRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRK 215 YA PFR WT +EL+ +S+PLLY PGTNWNY+HTNY+LLGLALEK G+ + TL+Q K Sbjct 170 FYAQPFRTWTPEELISFGTSQPLLYTPGTNWNYSHTNYVLLGLALEKITGKPVKTLMQEK 229 Query 216 VLSPLGLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAI 275 VL PLGLT T + ++P IPEPALHAF+SERR+ LKIP PFYEEST+WNPSWT+T GAI Sbjct 230 VLGPLGLTNTTDPESPFIPEPALHAFSSERRSFLKIPTNTPFYEESTYWNPSWTLTRGAI 289 Query 276 QTTTIYDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGI 335 QTT IYD+ TA+ IG+G+LLS +SY+ MVST LRGKT PGC TCF Q+ GY+YGLGI Sbjct 290 QTTNIYDLHDTAIAIGTGKLLSPESYQAMVSTNLRGKTTTLPGCNTCFPQSLGYTYGLGI 349 Query 336 VISGHWLLQNPMFAGYAAVEAYLPSQRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGA 395 VI+G+WL+QNP+F GY+AV AYLPS+++A+A+AVTY AFD G+Y+N A+ILFR+IG Sbjct 350 VITGNWLIQNPLFGGYSAVAAYLPSEKIAIAIAVTYDQSAFDQNGDYKNAAEILFRRIGG 409 Query 396 EVAPNDAPPM 405 ++AP+D PP+ Sbjct 410 KLAPHDPPPV 419 >gi|258652524|ref|YP_003201680.1| beta-lactamase [Nakamurella multipartita DSM 44233] gi|258555749|gb|ACV78691.1| beta-lactamase [Nakamurella multipartita DSM 44233] Length=440 Score = 467 bits (1202), Expect = 1e-129, Method: Compositional matrix adjust. Identities = 234/370 (64%), Positives = 276/370 (75%), Gaps = 3/370 (0%) Query 41 VIRIVRDFMTQAHLKAVLVRVTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVAT 100 V+ +V F+ HL++VL+RVT +V +AVG+SMTGVPATT MHFRNGAVAISY++T Sbjct 72 VMNVVNTFVQDNHLRSVLIRVTRGEDVLVEQAVGESMTGVPATTDMHFRNGAVAISYMST 131 Query 101 LLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANP 160 LLL LVDE K+ LDDK+S WLPD PH D+VTL QLAQMTSGY DY E A YA+P Sbjct 132 LLLILVDEGKVALDDKVSTWLPDIPHTDQVTLRQLAQMTSGYVDYEQTPE-LTAANYADP 190 Query 161 FRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPL 220 ++QWT QELL +PL Y PGTNWNYAHTNY++LGLALEK GQ + LL+ KVL PL Sbjct 191 YKQWTPQELLSFAVDQPLYYTPGTNWNYAHTNYVILGLALEKITGQPLDELLRSKVLDPL 250 Query 221 GLTATANSD-TPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTT 279 GLT T+ +D TPAI EP LHAFTSERR+ALK+PA + YEESTFWNPSWT+ GAIQTT Sbjct 251 GLTQTSGNDGTPAILEPVLHAFTSERRSALKVPADIALYEESTFWNPSWTLAQGAIQTTN 310 Query 280 IYDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISG 339 + D+ TA I SGRLLS SY STELRGKT A GCP CFEQ GY+YGLG+VIS Sbjct 311 LRDLSVTARAINSGRLLSPQSYATFSSTELRGKTSAVAGCPACFEQGIGYTYGLGVVISD 370 Query 340 HWLLQNPMFAGYAAVEAYLPSQRVAVAVAVTYAPEAFD-DQGNYRNQADILFRKIGAEVA 398 WLLQNP+F+G +AVEAYLPSQ VA+AVAVTY P AFD G Y N AD L+R++ V Sbjct 371 DWLLQNPLFSGESAVEAYLPSQDVAIAVAVTYDPAAFDATTGAYVNAADQLWRQVALTVV 430 Query 399 PNDAPPMPPG 408 P++ PP+ G Sbjct 431 PDNPPPIKKG 440 >gi|343924745|ref|ZP_08764284.1| hypothetical protein GOALK_026_00160 [Gordonia alkanivorans NBRC 16433] gi|343765252|dbj|GAA11210.1| hypothetical protein GOALK_026_00160 [Gordonia alkanivorans NBRC 16433] Length=411 Score = 460 bits (1183), Expect = 2e-127, Method: Compositional matrix adjust. Identities = 215/370 (59%), Positives = 277/370 (75%), Gaps = 0/370 (0%) Query 37 KADAVIRIVRDFMTQAHLKAVLVRVTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAIS 96 KA + +IV D MT HLKAV+VRVT G EV+T+A G+S TG+PAT MHFRNG+VAI+ Sbjct 40 KAAEIEQIVEDVMTSKHLKAVIVRVTQDGDEVITKAFGESQTGIPATPDMHFRNGSVAIA 99 Query 97 YVATLLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAEL 156 YVA +LL+LVDE + LDD + RW+P+ PHAD VTLGQLA MTSGY DYVLGN+AF+ E Sbjct 100 YVAAVLLQLVDEGVVALDDTIGRWVPEIPHADEVTLGQLATMTSGYQDYVLGNDAFETEE 159 Query 157 YANPFRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKV 216 NPF+ WTT E+L + LLY PGTNWNYAHTNY++LGLAL+K G+ + LL+ ++ Sbjct 160 LNNPFKAWTTGEMLSYAMEKSLLYKPGTNWNYAHTNYVVLGLALQKITGKPVEDLLRERI 219 Query 217 LSPLGLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQ 276 PLGL+ T ++ T AIP+PALHA++SERR LK+P+ PFYEE+T WNPSW+ITHGAIQ Sbjct 220 SEPLGLSNTVSNLTAAIPDPALHAYSSERRGILKLPSEAPFYEETTGWNPSWSITHGAIQ 279 Query 277 TTTIYDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIV 336 T+ IYD+EAT + +G LS +SY+ M ST LRG R PGC TC N+ Y+YG+G+V Sbjct 280 TSNIYDVEATGRKLFAGETLSKESYETMTSTRLRGIARPLPGCATCVAMNERYTYGMGVV 339 Query 337 ISGHWLLQNPMFAGYAAVEAYLPSQRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAE 396 ++G WL+QNP+F GYAAV YLP Q+V++AVAVTY AF G+Y N + +F +IGA Sbjct 340 LTGDWLVQNPLFNGYAAVVGYLPDQKVSIAVAVTYEAAAFGPDGSYENGGNPIFSRIGAL 399 Query 397 VAPNDAPPMP 406 +AP+ AP +P Sbjct 400 MAPDHAPLIP 409 >gi|284993090|ref|YP_003411645.1| beta-lactamase [Geodermatophilus obscurus DSM 43160] gi|284066336|gb|ADB77274.1| beta-lactamase [Geodermatophilus obscurus DSM 43160] Length=403 Score = 391 bits (1004), Expect = 1e-106, Method: Compositional matrix adjust. Identities = 201/389 (52%), Positives = 253/389 (66%), Gaps = 4/389 (1%) Query 10 SVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVRVTVAGKEVV 69 +VL LG+ A + T PA +P A A+ VR M HL+AV++ VT G+ V Sbjct 7 AVLTLGVTAVPSGATTTPADTPQEQ--TASAIADSVRSAMADGHLRAVIIEVTQGGEVVT 64 Query 70 TRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRWLPDFPHADR 129 +A G SM GVPATT MHFRNGAVA +Y++TLL++ VDE ++ LDD + RW+PD P AD Sbjct 65 RQAFGTSMDGVPATTDMHFRNGAVAFTYLSTLLMQFVDEHEVTLDDTIDRWMPDLPEADE 124 Query 130 VTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLYDPGTNWNYA 189 VTL LA TSGYPDY + A++A A+PF WT +E L +RP+ + PGTNW+YA Sbjct 125 VTLRMLANQTSGYPDYET-DPAWEAAWAADPFHIWTFEERLAYAFTRPVAFPPGTNWSYA 183 Query 190 HTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHAFTSERRAAL 249 HTN+++LG L + G+ + LL+ +VL P+GLT T S T +P+P LH F+SERR AL Sbjct 184 HTNFMILGEILAEIGGKPLDQLLREEVLGPMGLTETLASVTSGVPDPVLHTFSSERRGAL 243 Query 250 KIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADSYKKMVSTEL 309 I FYEESTFWN W GA QTTT+ DM TAV +G+G LLS SY M L Sbjct 244 GIAPTTAFYEESTFWNTQWGTPIGANQTTTVSDMATTAVQVGTGALLSDSSYHAMTDPNL 303 Query 310 RGKTRAQPGC-PTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPSQRVAVAVA 368 G P C P+CF Q GY+YGLG+V SG W+LQNP+ AG + AYLPSQ +A+AVA Sbjct 304 LGFGYTDPSCSPSCFTQVQGYNYGLGVVRSGSWILQNPLLAGISGTAAYLPSQEIAIAVA 363 Query 369 VTYAPEAFDDQGNYRNQADILFRKIGAEV 397 VTY P AFD +GNY N AD LFR IGA V Sbjct 364 VTYLPGAFDAEGNYANAADRLFRSIGAVV 392 >gi|254430312|ref|ZP_05044015.1| beta-lactamase [Cyanobium sp. PCC 7001] gi|197624765|gb|EDY37324.1| beta-lactamase [Cyanobium sp. PCC 7001] Length=413 Score = 391 bits (1004), Expect = 1e-106, Method: Compositional matrix adjust. Identities = 192/351 (55%), Positives = 261/351 (75%), Gaps = 1/351 (0%) Query 45 VRDFMTQAHLKAVLVRVTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLK 104 V D Q HL+AVLVRV+V G++++ G+S+ G PAT AM FRNG+VA++Y+ATLLL+ Sbjct 38 VDDARRQGHLRAVLVRVSVNGQDLLRMVSGESLPGQPATAAMRFRNGSVAMAYLATLLLR 97 Query 105 LVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQW 164 + ++ + LD + RWLP+ PHA+RV+L QLAQMT+GY DYV N AF A +PFR+W Sbjct 98 MAEQGVVDLDAPVRRWLPEVPHAERVSLRQLAQMTAGYRDYVQ-NPAFIAAFERDPFRRW 156 Query 165 TTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTA 224 ++ELL LLY PGTNWNY+HT+ LLLG+ALE+A G+ + LLQR+VL+PLGL Sbjct 157 RSEELLAFAEPASLLYPPGTNWNYSHTSMLLLGMALERAGGEPLEQLLQRQVLNPLGLKH 216 Query 225 TANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDME 284 T+++ T AIP P LHA++ ERR+AL +P F EES+FW+PSWT+ GA+QTTT+ D+ Sbjct 217 TSDAKTAAIPPPVLHAYSGERRSALALPPQQGFLEESSFWDPSWTLPAGAVQTTTLDDLH 276 Query 285 ATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQ 344 TAVGIG G LL+ SY+ MV+T+LRG+T A PGC TCF Q++GY++G+GI+ +G WL Q Sbjct 277 TTAVGIGGGALLTPASYRAMVNTDLRGRTTALPGCGTCFPQSEGYTFGMGIITTGRWLTQ 336 Query 345 NPMFAGYAAVEAYLPSQRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGA 395 P+F GYAA Y P +R+A+AVAVT+ EAF G+Y N+A+ LFR++GA Sbjct 337 TPLFGGYAAAFGYHPERRIAIAVAVTFQEEAFQPDGSYVNEAERLFRRLGA 387 >gi|328887139|emb|CCA60378.1| beta-lactamase [Streptomyces venezuelae ATCC 10712] Length=431 Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 173/367 (48%), Positives = 232/367 (64%), Gaps = 20/367 (5%) Query 38 ADAVIRIVRDFMTQAHLKAVLVRVTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISY 97 A V+ I R + L AV VRVT+ G+EV+T A+G SMTGVPA MHFR G+VA ++ Sbjct 77 AGRVLDITRKAKSDLRLNAVQVRVTLDGREVLTDALGQSMTGVPAEPDMHFRAGSVAFAH 136 Query 98 VATLLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELY 157 +AT LLKLV+E+++RLDD + RWLPD P ADR+TL LA T+G DYV + AF EL Sbjct 137 IATTLLKLVEERRVRLDDTVERWLPDLPKADRITLRMLASNTTGLHDYVT-DPAFGKELT 195 Query 158 ANPFRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVL 217 ANPFR WT +EL+ Y+PG +W+Y+H NY+ L ALEK G + L++ KV Sbjct 196 ANPFRAWTPKELVAFPLRHSFWYEPGKSWSYSHANYVYLIRALEKITGVRIDRLVREKVT 255 Query 218 SPLGLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQT 277 PL L T N+ TP IP P LHAFTS+R YEESTFWNPSWT GA+ T Sbjct 256 GPLELRDTQNNFTPEIPRPVLHAFTSDRG----------LYEESTFWNPSWTTAPGAVIT 305 Query 278 TTIYDMEATAVGIGSGRLLSADSYKKMV---STELRGKTRAQPGCPTCFEQNDGYSYGLG 334 T I D+ +A IGSG LLS SY+ ++ + L G TR P C +Q + +GLG Sbjct 306 THICDLARSAEAIGSGELLSPRSYRTLINPGTVGLGGGTRTCPAS-ICLKQTEAKHFGLG 364 Query 335 IVISGHWLLQNPMFAGYAAVEAYLPSQRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIG 394 +++ +W++QNP F+GYAA++AYLPS+R+A+AV+ T + D N A+++ +I Sbjct 365 VIVVNNWVVQNPSFSGYAAIQAYLPSKRLAIAVSSTKTADTPDG-----NTAEVVATRIA 419 Query 395 AEVAPND 401 A +AP D Sbjct 420 AALAPGD 426 >gi|256389688|ref|YP_003111252.1| beta-lactamase [Catenulispora acidiphila DSM 44928] gi|256355914|gb|ACU69411.1| beta-lactamase [Catenulispora acidiphila DSM 44928] Length=415 Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 156/335 (47%), Positives = 208/335 (63%), Gaps = 18/335 (5%) Query 54 LKAVLVRVTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRL 113 L++V+ RVT G++V T A+G SMTGVPA T M FR G+V I+++ +L++LVDEK++ L Sbjct 68 LRSVITRVTQDGRDVWTGALGPSMTGVPARTDMRFRAGSVGIAFMGVMLMQLVDEKRVSL 127 Query 114 DDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQI 173 D +SRWLP+ PHAD++TLG L TSG DYV N AF AEL A+PF+QWT QELL Sbjct 128 ADPISRWLPEVPHADQITLGMLGDSTSGIQDYV-KNPAFVAELLAHPFKQWTPQELLALA 186 Query 174 SSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAI 233 + + LY PG N++Y+H NY+LLG ALE+ + LLQ+++ GL ATANS TP I Sbjct 187 NPQTPLYAPGKNFSYSHANYVLLGAALERITHTRLDRLLQQRIYPRFGLHATANSFTPDI 246 Query 234 PEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSG 293 P PALHAFT+ R PF EES+FWNPSWT GA+ T + D+ G+G G Sbjct 247 PAPALHAFTTARG---------PF-EESSFWNPSWTTAPGAVITMDVCDLARAGQGVGVG 296 Query 294 RLLSADSYKKMVSTELRGKTRAQP-----GCPT--CFEQNDGYSYGLGIVISGHWLLQNP 346 L+ ++ ++ G QP CP C Q YGLG ++ W+ QNP Sbjct 297 TTLTRQGHQTFLNPGTVGLGTPQPYLPGGDCPAAICIPQTAAAHYGLGALVVNGWVFQNP 356 Query 347 MFAGYAAVEAYLPSQRVAVAVAVTYAPEAFDDQGN 381 F GYAA+ AYLPSQ + +AV+VT + + D N Sbjct 357 SFTGYAALMAYLPSQHLTIAVSVTTSADTDPDIVN 391 >gi|301058486|ref|ZP_07199499.1| beta-lactamase [delta proteobacterium NaphS2] gi|300447408|gb|EFK11160.1| beta-lactamase [delta proteobacterium NaphS2] Length=378 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 150/365 (42%), Positives = 213/365 (59%), Gaps = 25/365 (6%) Query 37 KADAVIRIVRDFMTQAHLKAVLVRVTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAIS 96 K A++ +V + M Q L AVL+ +TV G+E++T A G+SMTGVP T MH RNG+VA++ Sbjct 36 KIPAILALVANAMEQEKLNAVLLGITVEGEELLTLADGESMTGVPTTANMHLRNGSVAVA 95 Query 97 YVATLLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAEL 156 Y+ +LL +LVD ++ D + +WLPD P + VTL L TSGYPDYV +AF + Sbjct 96 YMGSLLYRLVDAGIVKAGDAVGKWLPDLPESQNVTLEMLINGTSGYPDYV-PMDAFLEKF 154 Query 157 YANPFRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKV 216 YANPF QW+ +EL+ S + PG +WNYAHTN+++LGLALEKAAG+ L+Q + Sbjct 155 YANPFYQWSPEELIALGLSEAPRFAPGRDWNYAHTNFVILGLALEKAAGRSFGELMQEYI 214 Query 217 LSPLGLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQ 276 L+P G+T T DTP+IP+P LH++T ER YE++TFWNPSWT+ GA+Q Sbjct 215 LTPFGMTQTEAPDTPSIPQPVLHSYTDERGP----------YEDATFWNPSWTLARGAVQ 264 Query 277 TTTIYDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIV 336 T+TI D +G G+ L+ SY+ M++ G P + Y GIV Sbjct 265 TSTIRDTLIGFRAVGRGQGLTPASYQAMLAPHTAGMKFWTP----------KFYYAQGIV 314 Query 337 ISGHWLLQNPMFAGYAAVEAYLPSQRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAE 396 WL Q P F G Y + +AVAV T + E+ + N A ++F+++ A Sbjct 315 FDHGWLTQAPSFGGLFGTAGYFMDKDIAVAVWCTKSIESKTEG----NTASVIFKQLTAI 370 Query 397 VAPND 401 + P Sbjct 371 LTPES 375 >gi|256391384|ref|YP_003112948.1| beta-lactamase [Catenulispora acidiphila DSM 44928] gi|256357610|gb|ACU71107.1| beta-lactamase [Catenulispora acidiphila DSM 44928] Length=421 Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 147/351 (42%), Positives = 204/351 (59%), Gaps = 20/351 (5%) Query 29 SSPTNNGAKADAVIRIVRDFMTQAHLKAVLVRVTVAGKEVVTRAVGDSMTGVPATTAMHF 88 SSP A +++I + Q L +V+++VT + V+T+A+G+SMTGVPA T M F Sbjct 58 SSPEPAQGAALQILKIAKADQQQFGLNSVILKVTKGRQNVLTKALGESMTGVPADTDMQF 117 Query 89 RNGAVAISYVATLLLKLVDEKKLRLDDKLSRWLPDFPH---ADRVTLGQLAQMTSGYPDY 145 R G+V I+Y+AT+LL+L ++ + LD ++ LP AD++TL L TSG DY Sbjct 118 RTGSVGIAYMATILLQLAEKGIVDLDAPVAPLLPKVLQVKGADKITLRMLGNSTSGLHDY 177 Query 146 VLGNEAFDAELYANPFRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAG 205 V+ + F A L +PFR WT ++L L Y PGTNW+Y+H N++L G ALEK G Sbjct 178 VI-DPDFLAALEPHPFRYWTEDDVLAYPFHHDLWYAPGTNWSYSHANFVLEGEALEKITG 236 Query 206 QDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWN 265 + LL+++VL PLGL T P I +P +HAFTSER YEESTFWN Sbjct 237 VPLDQLLKQRVLQPLGLDHTFIDAKPPITDP-VHAFTSERGT----------YEESTFWN 285 Query 266 PSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADSYKKMV---STELRGKTRAQPGCPTC 322 PSWT HGAI T I D+ +A IG+GRLLS + + + L ++ PG C Sbjct 286 PSWTTAHGAILTQNICDLATSARAIGTGRLLSPAWRQFQLNPGTVGLGDPSKCPPGI--C 343 Query 323 FEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPSQRVAVAVAVTYAP 373 YG G+ + W++QNP F+GY AV+AYLPSQ +++AV T P Sbjct 344 RLNTQAAHYGFGVQVVNTWVVQNPSFSGYFAVQAYLPSQDLSIAVNTTDGP 394 >gi|111019589|ref|YP_702561.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhodococcus jostii RHA1] gi|110819119|gb|ABG94403.1| probable serine-type D-Ala-D-Ala carboxypeptidase [Rhodococcus jostii RHA1] Length=395 Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 135/369 (37%), Positives = 208/369 (57%), Gaps = 26/369 (7%) Query 38 ADAVIRIVRDFMTQAHLKAVLVRVTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISY 97 AD ++ IVRD +T+ L + V +E+V AVG+S GVPAT M R G Sbjct 53 ADKIVDIVRDKLTELDLSGAVFGVWRGDEEIVAGAVGESPLGVPATRDMQLRVGQPMEPM 112 Query 98 VATLLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELY 157 ++T+LL+L + L LD+ +++W+PDFP AD++T LA T+G DYV N F Y Sbjct 113 LSTVLLQLGEAGTLSLDEPIAKWVPDFPRADKITPRMLANSTTGISDYVT-NPDFLKIFY 171 Query 158 ANPFRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVL 217 ANP + +T+QE+ D ++RP L++PGT++ YAH++ LLG+ LEKAAG+ + LL+ ++ Sbjct 172 ANPIKGFTSQEIFDLANARPPLFEPGTSFAYAHSDLCLLGVVLEKAAGKPLGDLLKERIF 231 Query 218 SPLGLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQT 277 +PLG+ A++ TP + EP LH +T+ER GV +E+STFWNP+ + G + Sbjct 232 TPLGMDASSVVLTPQMSEPTLHGYTNER--------GV--FEDSTFWNPTAFLNSGNMN- 280 Query 278 TTIYDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVI 337 +T+ ++ +G+G LLS ++ +M++ + G G T D Y + G V Sbjct 281 STVAEVARWVRALGTGELLSDTAFTEMMADKTAGL-----GPLTA----DKY-FAFGTVH 330 Query 338 SGHWLLQNPMFAGYAAVEAYLPSQRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEV 397 G WLL NP F GY + Y + + V T P A N N I ++IGA + Sbjct 331 LGSWLLMNPAFGGYNGIALYETESKTTIVVYATLGPTA---NANANNTVPI-GKEIGALL 386 Query 398 APNDAPPMP 406 P++ P +P Sbjct 387 FPDNPPKVP 395 >gi|226362344|ref|YP_002780122.1| hypothetical protein ROP_29300 [Rhodococcus opacus B4] gi|226240829|dbj|BAH51177.1| hypothetical protein [Rhodococcus opacus B4] Length=389 Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 131/363 (37%), Positives = 192/363 (53%), Gaps = 31/363 (8%) Query 44 IVRDFMTQAHLKAVLVRVTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLL 103 IV+D MT+ L A + V ++V A+G S GV AT M R G ++T+LL Sbjct 54 IVQDKMTELDLSAAVFGVWRGDEQVTVGALGGSPIGVTATPDMQLRVGQPMEPMLSTVLL 113 Query 104 KLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQ 163 +L + + LD ++ W+PDFP AD++T LA T+G DYV E F + YANP Sbjct 114 QLDKDGVVPLDKPIAEWVPDFPRADKITPRMLANSTTGIADYVTDPE-FLKQFYANPMAG 172 Query 164 WTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLT 223 +T Q++ D ++RP L++PGTNW YAH++ LLG+ LEKA G + L+Q+++L PLG+ Sbjct 173 FTAQQIFDLANARPPLFEPGTNWAYAHSDLCLLGVVLEKATGTTLHDLIQQRILDPLGMN 232 Query 224 ATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDM 283 + TP + EP LH +T+ER GV +E+STFWNP+ + G + +T+ D+ Sbjct 233 DSDVVLTPQMSEPTLHGYTNER--------GV--FEDSTFWNPTAFLNSGNMN-STLADV 281 Query 284 EATAVGIGSGRLLSADSYKKMV--STELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHW 341 + +G+LLS + +K+M+ ST G AQ + G+V W Sbjct 282 SVWVRALAAGKLLSEEQFKEMMAPSTAGLGPMTAQ------------KYFAFGVVHIDDW 329 Query 342 LLQNPMFAGYAAVEAYLPSQRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPND 401 L NP F GY V Y + V T P+A D N A + + IGA + P D Sbjct 330 LYMNPAFGGYNGVAFYDTKTDTTIVVYCTLGPKANSDT----NNAVPIGKDIGALLVP-D 384 Query 402 APP 404 PP Sbjct 385 RPP 387 >gi|229494236|ref|ZP_04387999.1| beta-lactamase [Rhodococcus erythropolis SK121] gi|229318598|gb|EEN84456.1| beta-lactamase [Rhodococcus erythropolis SK121] Length=406 Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 127/366 (35%), Positives = 191/366 (53%), Gaps = 26/366 (7%) Query 41 VIRIVRDFMTQAHLKAVLVRVTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVAT 100 + IVR + L A + V EV AVG+S GVPATT M R G ++T Sbjct 65 ITDIVRRQVADLGLSAAVFGVWRGDDEVALGAVGESPVGVPATTDMQLRVGQPMEPMLST 124 Query 101 LLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANP 160 +LL+L +E L LD +++W P+FP AD +T LA TSG DYV + F NP Sbjct 125 VLLQLDEEGTLPLDQPIAKWEPNFPRADTITPRMLANSTSGISDYVT-DPQFLKLFTDNP 183 Query 161 FRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPL 220 + WT++E+LD +SRP L++PGT+W YAH++ LLG +EKA G+ + LLQ++V PL Sbjct 184 MKGWTSREILDLANSRPPLFEPGTSWAYAHSDLTLLGDVMEKATGKPLGELLQQRVFDPL 243 Query 221 GLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTI 280 G+ ++ T + EP LH +T+ER GV +E+STFWNP+ H + Sbjct 244 GMDHSSVVLTSQMDEPILHGYTNER--------GV--FEDSTFWNPT-AFLHSGNMNAPV 292 Query 281 YDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGH 340 D+ +G+G LLS ++++ ++ T A G T + +S+G G + Sbjct 293 ADVGKWVRALGTGELLSDKAFEQQMA-----PTTAGLGSMTA---DKFFSFGTGHLDG-- 342 Query 341 WLLQNPMFAGYAAVEAYLPSQRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPN 400 WL+ NP + GY + Y P + + V T P D N A + ++IG + P+ Sbjct 343 WLVMNPSYGGYNGLALYYPDSKTTIVVYATLGPTTNAD----LNNAVSMGKEIGTLLEPD 398 Query 401 DAPPMP 406 P +P Sbjct 399 HPPQVP 404 >gi|226304222|ref|YP_002764180.1| hypothetical protein RER_07330 [Rhodococcus erythropolis PR4] gi|226183337|dbj|BAH31441.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=395 Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 128/369 (35%), Positives = 191/369 (52%), Gaps = 30/369 (8%) Query 38 ADAVIRIVRDFMTQAHLKAVLVRVTVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISY 97 AD V R V D L A + V E+ AVG+S GVPATT M R G Sbjct 55 ADLVRRQVADL----GLSAAVFGVWRGDDEIALGAVGESPIGVPATTDMQLRVGQPMEPM 110 Query 98 VATLLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELY 157 ++T+LL+L +E L LD +++W P+FP A+ +T LA TSG DYV + F Sbjct 111 LSTVLLQLDEEGTLPLDQPIAKWEPNFPRAETITPRMLANSTSGISDYVT-DPQFLKLFT 169 Query 158 ANPFRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVL 217 NP + WT+QE+L+ +SRP L++PGT+W YAH++ LLG +EKA G+ + LLQ++V Sbjct 170 DNPMKGWTSQEILNLANSRPPLFEPGTSWAYAHSDLTLLGDVMEKATGKPLGDLLQQRVF 229 Query 218 SPLGLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQT 277 PLG+ ++ T + EP LH +T+ER GV +E+STFWNP+ H Sbjct 230 DPLGMDHSSVVLTSKMDEPILHGYTNER--------GV--FEDSTFWNPT-AFLHSGNMN 278 Query 278 TTIYDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVI 337 + D+ +G+G LLS ++++ ++ T A G T + +S+G G + Sbjct 279 APVADVGKWVRALGTGELLSDKAFEQQMA-----PTTAGLGSMTA---DKFFSFGTGHLD 330 Query 338 SGHWLLQNPMFAGYAAVEAYLPSQRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEV 397 WL+ NP + GY + Y P + + V T P D N A + + IG + Sbjct 331 G--WLVMNPSYGGYNGLALYYPDSKTTIVVYATLGPTTNAD----LNNAVPMGKAIGTLL 384 Query 398 APNDAPPMP 406 P+ P +P Sbjct 385 EPDHPPQVP 393 >gi|111023881|ref|YP_706853.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhodococcus jostii RHA1] gi|110823411|gb|ABG98695.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhodococcus jostii RHA1] Length=378 Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 128/407 (32%), Positives = 189/407 (47%), Gaps = 45/407 (11%) Query 5 RRLGCSVLALGL--LAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVRVT 62 RR+ +VLA+ + L GC PA A+ D I M A + +V V Sbjct 12 RRI-VAVLAISMTGLVGCGESAVPPAVP----DAQLDDTIPAA---MEHASIPGAIVGVW 63 Query 63 VAGKEVVTRA--VGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRW 120 G A VGD+ TG P + R G+V ++ T +L+LVD+ K+ LDD + R+ Sbjct 64 QDGAAPYAEAFGVGDTATGEPMAPDLFMRVGSVTKTFTTTAVLQLVDQGKVGLDDPIDRY 123 Query 121 LPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLY 180 +PD P+ D +T+ QLA M SG PDY +E L + P RQWT QELL+ SRP L+ Sbjct 124 VPDVPNGDTITIRQLAAMRSGLPDY---SEVVIPALPSQPQRQWTPQELLEISFSRPPLF 180 Query 181 DPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHA 240 PGT ++Y++TN LLGL +EK +GQ + + + P L T+ A+P P H Sbjct 181 TPGTEFDYSNTNTALLGLVVEKVSGQPLNAFIDEFITRPENLGHTSVPTDAALPSPHAHG 240 Query 241 FTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADS 300 +T + ++T WNPSW G + +T+ D+ + +G LLS + Sbjct 241 YTKKTDGETV---------DATDWNPSWGFGAGNM-ISTLDDLRGWVRDLATGTLLSPAT 290 Query 301 YKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS 360 ++ + + QP + G YGLG+ W+ N AGY YLP Sbjct 291 QRE--------REQFQPAP----SEGAGSLYGLGVENQNGWIGHNGNIAGYQTYAYYLPP 338 Query 361 QRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMPP 407 + V + V D G + F +I V+P+ P PP Sbjct 339 EGKTVVMLVN---TNVDPLGVWN-----FFAEIVKIVSPDHPWPAPP 377 >gi|291446827|ref|ZP_06586217.1| beta-lactamase [Streptomyces roseosporus NRRL 15998] gi|291349774|gb|EFE76678.1| beta-lactamase [Streptomyces roseosporus NRRL 15998] Length=431 Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 104/336 (31%), Positives = 170/336 (51%), Gaps = 26/336 (7%) Query 36 AKADAVIRIVRDFMTQAHLKAVLVRVTVAGKEVVTRA--VGDSMTGVPATTAMHFRNGAV 93 A A + R + + QA + +V + + GK A VG+++TG P + R G+ Sbjct 80 ALAAELDRTIDEVREQAGIPGAVVGLWMPGKGSYVHASGVGNTVTGEPMSAGTRIRIGSE 139 Query 94 AISYVATLLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFD 153 ++ T LL+LVD+K+++LDD +S ++P + DR+TL LA M SG Y + F Sbjct 140 TKTFTVTALLQLVDDKRVKLDDPISAYVPGVRNGDRITLRHLAGMRSGLFPYT-SDPGFV 198 Query 154 AELYANPFRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQ 213 +L ++P+R +T QE+L + P + Y+++N +LLGL +EK GQ + ++ Sbjct 199 NDLLSDPYRSFTPQEVLAYGMKHKNTFKPDAQFQYSNSNLVLLGLVIEKVTGQRLDQVIH 258 Query 214 RKVLSPLGLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHG 273 +VL P L +T PEP H +T + + E+ST WNPSW G Sbjct 259 ERVLRPARLHSTLFPTGAEFPEPHAHGYTDQTLSGET--------EDSTDWNPSWAWAAG 310 Query 274 AIQTTTIYDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGL 333 A+ + ++D+ A + +G LLS + + ++T+ PT F G SYGL Sbjct 311 AM-ISDLHDLRRWAKVVATGELLSPKTQAQRLTTQ-----------PTGFP---GLSYGL 355 Query 334 GIVISGHWLLQNPMFAGYAAVEAYLPSQRVAVAVAV 369 GI +G W+ N GY V YLP+Q+ + + + Sbjct 356 GIFETGGWIGHNGSLPGYETVTVYLPAQKATLVIMI 391 >gi|290958770|ref|YP_003489952.1| protease [Streptomyces scabiei 87.22] gi|260648296|emb|CBG71407.1| putative secreted protease [Streptomyces scabiei 87.22] Length=410 Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 117/376 (32%), Positives = 188/376 (50%), Gaps = 36/376 (9%) Query 36 AKADAVIRIVRDFMTQAHLKAVLVRVTVAGKEVVTRAVG--DSMTGVPATTAMHFRNGAV 93 A+ D + VR +A + V V + + G+ RA G D+ TG P TT + R G+ Sbjct 66 ARLDKAVAKVR---REAAIPGVAVGLWMPGRGCYVRATGVADTATGRPMTTDQYMRIGSE 122 Query 94 AISYVATLLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFD 153 ++ T LL+LVD+++LRLD +SR++ P+ DR+TL LA+M SG Y ++ F Sbjct 123 TKTFTVTALLELVDDRRLRLDTPISRYVRGVPNGDRITLRHLAEMRSGLFPYSADSD-FV 181 Query 154 AELYANPFRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQ 213 L ++P R +T +ELL ++PG + Y++TN +LLGL +EK G+ + ++ Sbjct 182 RALLSDPARYFTPRELLAYGFRHRNTFEPGAQFQYSNTNLVLLGLVIEKVGGRPLAEFIR 241 Query 214 RKVLSPLGLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHG 273 +VL P L T + PEP H +T++ + E++T WNPSW G Sbjct 242 ERVLGPARLRHTLFPEGREFPEPHAHGYTNQTLSGE--------VEDATDWNPSWAWAAG 293 Query 274 AIQTTTIYDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGL 333 A+ + ++D+ A + +G LLS + ++ ++ PT F G SYGL Sbjct 294 AM-ISDLHDLRRWARIVATGTLLSPQTQRERLTM-----------LPTGFP---GTSYGL 338 Query 334 GIVISGHWLLQNPMFAGYAAVEAYLPSQRVAVAVAVTYAPEAFDDQGNYRNQADILFRKI 393 GI SG W+ N GY +V +LPS++ + V + D + + +L R I Sbjct 339 GIFESGGWIGHNGSIPGYQSVTVHLPSRKATLVVLLNT-----DITHEGQEPSSLLARAI 393 Query 394 GAEVAPNDA--PPMPP 407 V P++ P PP Sbjct 394 TEIVTPDNVYDRPAPP 409 >gi|239989813|ref|ZP_04710477.1| beta-lactamase [Streptomyces roseosporus NRRL 11379] Length=413 Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 106/336 (32%), Positives = 171/336 (51%), Gaps = 29/336 (8%) Query 36 AKADAVIRIVRDFMTQAHLKAVLVRVTVAGKEVVTRA--VGDSMTGVPATTAMHFRNGAV 93 A+ D I VR+ QA + +V + + GK A VG+++TG P + R G+ Sbjct 65 AELDRTIDEVRE---QAGIPGAVVGLWMPGKGSYVHASGVGNTVTGEPMSAGTRIRIGSE 121 Query 94 AISYVATLLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFD 153 ++ T LL+LVD+K+++LDD +S ++P + DR+TL LA M SG Y + F Sbjct 122 TKTFTVTALLQLVDDKRVKLDDPISAYVPGVRNGDRITLRHLAGMRSGLFPYT-SDPGFV 180 Query 154 AELYANPFRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQ 213 +L ++P+R +T QE+L + P + Y+++N +LLGL +EK GQ + ++ Sbjct 181 NDLLSDPYRSFTPQEVLAYGMKHKNTFKPDAQFQYSNSNLVLLGLVIEKVTGQRLDQVIH 240 Query 214 RKVLSPLGLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHG 273 +VL P L +T PEP H +T + + E+ST WNPSW G Sbjct 241 ERVLRPARLHSTLFPTGAEFPEPHAHGYTDQTLSGET--------EDSTDWNPSWAWAAG 292 Query 274 AIQTTTIYDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGL 333 A+ + ++D+ A + +G LLS + + ++T+ PT F G SYGL Sbjct 293 AM-ISDLHDLRRWAKVVATGELLSPKTQAQRLTTQ-----------PTGFP---GLSYGL 337 Query 334 GIVISGHWLLQNPMFAGYAAVEAYLPSQRVAVAVAV 369 GI +G W+ N GY V YLP+Q+ + + + Sbjct 338 GIFETGGWIGHNGSLPGYETVTVYLPAQKATLVIMI 373 >gi|229491451|ref|ZP_04385275.1| beta-lactamase [Rhodococcus erythropolis SK121] gi|229321736|gb|EEN87533.1| beta-lactamase [Rhodococcus erythropolis SK121] Length=386 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 111/368 (31%), Positives = 176/368 (48%), Gaps = 31/368 (8%) Query 9 CSVLALGLLAGCAPPRTGPASSPTNNGAKA-DAVIRIVRDFMTQAHLKAVLVRVTVAG-- 65 CS + G + C+ ++ A +PT+ K D+ I D + A + + + + G Sbjct 14 CSAMVAGAVISCSTDKS--ADNPTSTTDKVMDSAITGQLDSIIDAAVNSTGIPGAMVGIW 71 Query 66 ----KEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRWL 121 V V D+ T P T + R G+V ++ T LL+LVDE K+ LDD +S+++ Sbjct 72 GPDGNYVKVAGVADTATKAPMETDFYHRIGSVTKTFTVTALLQLVDEGKIGLDDPISQYV 131 Query 122 PDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLYD 181 D ++L QLA M SG Y +E F ++ ++P R +T++EL + PL Sbjct 132 DGVMEGDAISLRQLAGMRSGLVAYTT-SEQFVMDVLSDPRRSFTSEELFGYVKDLPLQIR 190 Query 182 PGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHAF 241 PGT +Y++TN LLLG+ +EK G + ++ K+ +PLG+ T+ T A P P + Sbjct 191 PGTTVDYSNTNTLLLGMVIEKVTGSTLSDVIDTKITTPLGMEHTSFPTTNAFPNPHAQGY 250 Query 242 TSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADSY 301 T++ A T WNPSW GA+ +++ DM + G LL+ D+ Sbjct 251 TNQTLDESVTAA--------TDWNPSWGGAAGAM-ISSLDDMRIWVPALAKGDLLADDTQ 301 Query 302 KKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPSQ 361 K+ + TE G E +D YGLG+ SG W+ N GY V YLP + Sbjct 302 KQRLHTEPLG------------EGDDSSGYGLGLFNSGGWIGHNGSLPGYKTVSVYLPEK 349 Query 362 RVAVAVAV 369 + V + Sbjct 350 DTTLVVFI 357 >gi|226363487|ref|YP_002781269.1| S12 family peptidase [Rhodococcus opacus B4] gi|226241976|dbj|BAH52324.1| putative S12 family peptidase [Rhodococcus opacus B4] Length=429 Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 107/331 (33%), Positives = 162/331 (49%), Gaps = 23/331 (6%) Query 38 ADAVIRIVRDFMTQAHLKAVLVRV-TVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAIS 96 AD + + M+ A + +V V G V V D TG P + R G+V + Sbjct 56 ADRLDEAIEKAMSMAAIPGAIVGVWGPDGDYVKAFGVADKSTGAPMEADFYHRIGSVTKT 115 Query 97 YVATLLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAEL 156 + T LL+LVDE K+ LDD +S+++ P D++TL QLA+M SG P+Y N+ F L Sbjct 116 FTVTGLLQLVDEDKVALDDPISKYVEGVPAGDQITLRQLARMQSGLPNYT-ANKDFQQAL 174 Query 157 YANPFRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKV 216 ++P R +T ELL ++P + PG + Y++TN +LLGL +EK +G +P + +K+ Sbjct 175 LSDPMRNFTPPELLGYAFTQPASFPPGQGFEYSNTNTVLLGLVVEKVSGMPLPEYISQKI 234 Query 217 LSPLGLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQ 276 + PL + T+ T A PEP +T + + A T WNPSW GA+ Sbjct 235 IQPLKMADTSFPTTNAFPEPHAQGYTEQTLDEKEAVA--------TDWNPSWGWAAGAM- 285 Query 277 TTTIYDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIV 336 +T+ D+ A + +G LL + + R +T PG + YGLGI Sbjct 286 ISTLDDLRIWAPALATGTLLQPATQAQ------RLETVTAPGLAS------DVGYGLGIF 333 Query 337 ISGHWLLQNPMFAGYAAVEAYLPSQRVAVAV 367 W+ N GY V YLP + VA+ Sbjct 334 DIAGWIGHNGSLPGYQTVCIYLPEKETTVAI 364 >gi|169627434|ref|YP_001701083.1| beta-lactamase [Mycobacterium abscessus ATCC 19977] gi|169239401|emb|CAM60429.1| Beta-lactamase [Mycobacterium abscessus] Length=397 Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 113/366 (31%), Positives = 187/366 (52%), Gaps = 28/366 (7%) Query 3 VLRRLGCSVLALGLLAGCAPPRTGPASSPTN--NGAKADAVIRIVRDFMTQAHLKAVLVR 60 ++RR+ VL + LL + + + AK D+ I + +T A + +V Sbjct 14 LMRRILAVVLTIALLVSACGKHSAIVVAELDPQTTAKLDSAIN---EILTSAAVPGAIVG 70 Query 61 V-TVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSR 119 V G+ V T V ++ T P + R G+V ++ T +L+LVDE K+ LDD +++ Sbjct 71 VWGPKGQYVRTFGVANTATRAPLRPDFYHRIGSVTKTFTVTAVLQLVDEGKVELDDPIAK 130 Query 120 WLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLL 179 ++ P+ +++TL +LA+M SG +Y + + AF +L A+P RQ++T ELLD ++P Sbjct 131 YVDKVPNGNKITLRELARMQSGLFNYSM-SLAFSRDLEADPRRQYSTHELLDYAFAQPSN 189 Query 180 YDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALH 239 + PG + Y++TN +LLG +EK +GQ +P +Q + PLG+ T+ +T AI +P Sbjct 190 FVPGQGYEYSNTNAVLLGQVVEKVSGQTLPAFVQEHITGPLGMRRTSFPETSAIADPHAR 249 Query 240 AFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSAD 299 +T P G +ST WNPSW GA+ +T+ D+ + +G LL D Sbjct 250 GYTQ------LTPTGS--LVDSTDWNPSWASWAGAM-ISTLDDLRIWVPALATGVLLKPD 300 Query 300 SYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLP 359 S ++ R +T A P P D YGLGI + W+ + GY + Y P Sbjct 301 SQQQ------RLQTVAMPPVP------DDIRYGLGIFDARGWIGHSGSIPGYQTLAIYSP 348 Query 360 SQRVAV 365 +++ V Sbjct 349 AEQTTV 354 >gi|254386227|ref|ZP_05001538.1| beta-lactamase [Streptomyces sp. Mg1] gi|194345083|gb|EDX26049.1| beta-lactamase [Streptomyces sp. Mg1] Length=418 Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 107/327 (33%), Positives = 162/327 (50%), Gaps = 25/327 (7%) Query 43 RIVRDFMTQAHLKAVLVRVTVAGKEVVTRAVG--DSMTGVPATTAMHFRNGAVAISYVAT 100 ++VR M + + V+V ++ GK R G D T P TT M+ R G+ ++ T Sbjct 73 QVVRQVMAETKVPGVMVSLSAPGKGEYVRTFGIADKATRAPITTDMYMRIGSETKTFTVT 132 Query 101 LLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANP 160 LL+LVDE K LDD + +++ P+ DR+TL +LA M SG +Y + F A L ++P Sbjct 133 ALLQLVDEGKAGLDDPIGKYVAGVPNGDRITLRELAGMRSGLYNYSEDPDFFKA-LTSDP 191 Query 161 FRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPL 220 R +T QELL P+L+ PG ++Y +TN +LLGL +EK GQ + + KV+ P Sbjct 192 RRPFTPQELLGYSFKHPVLFAPGAKFDYCNTNLILLGLVVEKLTGQKLADYINEKVVKPA 251 Query 221 GLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTI 280 GLT T P P +T++ A K+ E+S WNPSW GA+ + + Sbjct 252 GLTHTLFPKGAEFPRPHSQGYTNQ-TATGKV-------EDSADWNPSWGWAAGAM-ISQL 302 Query 281 YDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGH 340 D++ A + +G LL+ + + + R R G YGLGI G Sbjct 303 GDLKQWAKVLATGELLTPATQAQRLKVT-RAGDRPDAG------------YGLGIFNVGG 349 Query 341 WLLQNPMFAGYAAVEAYLPSQRVAVAV 367 W+ N GY ++ YLP + + V Sbjct 350 WIGHNGSLPGYQSLTLYLPGAKATLVV 376 >gi|226306056|ref|YP_002766016.1| S12 family peptidase [Rhodococcus erythropolis PR4] gi|226185173|dbj|BAH33277.1| putative S12 family peptidase [Rhodococcus erythropolis PR4] Length=386 Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 109/368 (30%), Positives = 174/368 (48%), Gaps = 31/368 (8%) Query 9 CSVLALGLLAGCAPPRTGPASSPTNNGAKA-DAVIRIVRDFMTQAHLKAVLVRVTVAG-- 65 CS + G + C+ ++ A +PT+ K D+ I D + A + + + + G Sbjct 14 CSAMVAGAVISCSTDKS--ADNPTSTTDKVMDSAITGQLDSIIDAAVNSTGIPGAMVGIW 71 Query 66 ----KEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRWL 121 V V D+ T P T + R G+V ++ T LL+LVDE K+ LDD +S+++ Sbjct 72 GPDGNYVKVAGVADTATKAPMETDFYHRIGSVTKTFTVTALLQLVDEGKIGLDDPISQYV 131 Query 122 PDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLYD 181 D ++L LA M SG DY +E F E ++P R +T +EL+ + PL Sbjct 132 DGVMEGDAISLRHLAGMRSGLVDYTT-SEQFVMEYLSDPRRTFTPEELVGYVKDLPLQLR 190 Query 182 PGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHAF 241 PGT +Y++TN +LLG+ +EK +G + ++ K+ +PLG+ T+ T A P P + Sbjct 191 PGTTVDYSNTNTILLGMVIEKVSGSKLSDVIDTKITTPLGMEHTSFPTTNAFPTPHAQGY 250 Query 242 TSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADSY 301 T++ A T WNPSW GA+ +++ DM + G LL+ D+ Sbjct 251 TNQTLDESVTAA--------TDWNPSWGGAAGAM-ISSLDDMRIWVPALAKGDLLTDDTQ 301 Query 302 KKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPSQ 361 K+ + T E +D YGLG+ SG W+ N GY V YLP + Sbjct 302 KQRLQT------------VNLNEGDDSSGYGLGLFNSGGWIGHNGSLPGYKTVSVYLPEK 349 Query 362 RVAVAVAV 369 + V + Sbjct 350 DTTLVVFI 357 >gi|87302432|ref|ZP_01085249.1| possible conserved lipoprotein lpqk [Synechococcus sp. WH 5701] gi|87282776|gb|EAQ74733.1| possible conserved lipoprotein lpqk [Synechococcus sp. WH 5701] Length=356 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 109/367 (30%), Positives = 180/367 (50%), Gaps = 27/367 (7%) Query 32 TNNGAKADAVIRIVRDFMTQAHLKAVLVRVTVAGKEVVTRAVGDSMTGVPATTAMHFRNG 91 ++N +A + IV + + L++V+ V +E+V A+ P R G Sbjct 7 SSNDPRAQQISDIVSKSLPELDLQSVVFGVWDGDQEIVRGAIDAPSVQPPTAVDARVRVG 66 Query 92 AVAISYVATLLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEA 151 + ++T++L+L E L L++ ++++LP + R+T LA T+G PDYV + A Sbjct 67 QPMEAMLSTVMLQLGSEGVLHLNEPVAKYLPKLVNGARITPRMLANSTAGTPDYV-PDPA 125 Query 152 FDAELYANPFRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTL 211 F A + ANPF +T ELL + P L+ PGT++ Y+HT L LE A+GQ + L Sbjct 126 FVARVSANPFAGYTFDELLLYAQANPPLFPPGTDFAYSHTEMAALVQVLEAASGQSLEDL 185 Query 212 LQRKVLSPLGLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTIT 271 + ++ PLG+TA+A AI +PA HAFTS+R GV +E+ST+W+P+W Sbjct 186 MAARIFGPLGMTASAAHQNNAIEQPAFHAFTSQR--------GV--FEDSTYWDPTWGFN 235 Query 272 HGAIQTTTIYDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSY 331 G +I D+ + SG LL+A K+ ++ G + D + Sbjct 236 GG--MNASISDLGRWLRALNSGELLNAVDAKESLAPVTAGFAK----------MTDQRYF 283 Query 332 GLGIVISGHWLLQNPMFAGYAAVEAYLPSQRVAVAVAVTYAPEAFDDQGNYRNQADILFR 391 G ++SG W+L NP GY A + + V T P ++ N + I+ + Sbjct 284 AYGSLVSGGWILGNPSLNGYQGFTAQHRDPSLTIVVWSTGGPSNTEES----NASQIISQ 339 Query 392 KIGAEVA 398 +I + V+ Sbjct 340 RIASIVS 346 >gi|111021123|ref|YP_704095.1| penicillin-binding protein [Rhodococcus jostii RHA1] gi|110820653|gb|ABG95937.1| probable penicillin-binding protein [Rhodococcus jostii RHA1] Length=437 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 106/333 (32%), Positives = 161/333 (49%), Gaps = 23/333 (6%) Query 38 ADAVIRIVRDFMTQAHLKAVLVRV-TVAGKEVVTRAVGDSMTGVPATTAMHFRNGAVAIS 96 AD + + M+ A + +V V G V V D TG P T R G+V + Sbjct 64 ADRLDEAIEKTMSMAAIPGAIVGVWGPDGNYVKAFGVADKTTGAPMETDFFHRIGSVTKT 123 Query 97 YVATLLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAEL 156 + T LL+LVDE K+ LDD +S+++ P D++TL +LA+M SG +Y NE F L Sbjct 124 FTVTGLLQLVDEDKVALDDPISKYVEGVPLGDQITLRELARMQSGLANYS-ANEDFQKAL 182 Query 157 YANPFRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKV 216 ++P +T Q+LL ++P + PG + Y++TN LLGL +EK +G +P + +K+ Sbjct 183 LSDPQAAFTPQQLLGYAFAQPATFPPGQGFEYSNTNTTLLGLVIEKVSGLPLPDYVTQKI 242 Query 217 LSPLGLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQ 276 + PL + T+ T A PEP +T + + A T WNPSW GA+ Sbjct 243 VQPLKMADTSFPTTNAFPEPHAQGYTEQTLDDKEAVA--------TDWNPSWGWAAGAM- 293 Query 277 TTTIYDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIV 336 +T+ D+ A + +G LL + + R +T PG + YGLGI Sbjct 294 ISTLDDLHIWAPALATGTLLQPATQAQ------RLETVNAPGLAS------DVGYGLGIF 341 Query 337 ISGHWLLQNPMFAGYAAVEAYLPSQRVAVAVAV 369 W+ N GY V YLP Q +A+ + Sbjct 342 DVAGWIGHNGSLPGYQTVCVYLPEQETTLAIMI 374 >gi|297196916|ref|ZP_06914313.1| beta-lactamase [Streptomyces sviceus ATCC 29083] gi|197715956|gb|EDY59990.1| beta-lactamase [Streptomyces sviceus ATCC 29083] Length=413 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 104/329 (32%), Positives = 159/329 (49%), Gaps = 26/329 (7%) Query 43 RIVRDFMTQAHLKAVLVRVTVAGKEVVTRAVG--DSMTGVPATTAMHFRNGAVAISYVAT 100 R + D QA + +V V + GK RA G D+ T P + + R G+ ++ T Sbjct 66 RTIEDVRRQAGIPGAVVGVWLPGKGSYVRATGVADTATRRPMASDVFLRIGSETKTFTVT 125 Query 101 LLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANP 160 LL LVD+ ++RLDD +S ++ P R+TL LA M SG Y + F L ++P Sbjct 126 ALLTLVDDGRIRLDDPISHYVDGVPDGHRITLRHLAGMRSGLFPYS-ADPDFAHALLSDP 184 Query 161 FRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPL 220 R +T QE+L + PGT + Y++TN +LLGL +EK +GQ + ++ +VL P Sbjct 185 QRYFTPQEVLAYGYRHDNTFAPGTQFQYSNTNLVLLGLVIEKVSGQCLADFIESRVLRPA 244 Query 221 GLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTI 280 L T P PEP H +T++ ++T WNPSW GA+ + + Sbjct 245 RLHHTLLPQGPEFPEPHPHGYTNQTLTGE--------VADTTNWNPSWAWAAGAM-ISNL 295 Query 281 YDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGH 340 +D+ A + +G LLSA + + + T PT G SYGLGI + Sbjct 296 HDLRRWAPIVATGSLLSAQTQAQRLKT-----------LPTGIA---GLSYGLGIFETAG 341 Query 341 WLLQNPMFAGYAAVEAYLPSQRVAVAVAV 369 W+ N GY V YLPS++ + + + Sbjct 342 WIGHNGSIPGYQTVTVYLPSKKATLVIMI 370 >gi|29829205|ref|NP_823839.1| beta-lactamase [Streptomyces avermitilis MA-4680] gi|29606311|dbj|BAC70374.1| putative beta-lactamase [Streptomyces avermitilis MA-4680] Length=437 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 104/329 (32%), Positives = 163/329 (50%), Gaps = 20/329 (6%) Query 41 VIRIVRDFMTQAHLKAVLVRVTVA--GKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYV 98 V VR M +A++ V V + + G+ V + V D G + ++ R G+ ++ Sbjct 87 VDEAVRRVMREANVPGVTVGLWTSDQGQHVRSFGVADKSGGERMSPDLYMRIGSETKTFT 146 Query 99 ATLLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYA 158 T LL+LVDE K+ LDD + +++ P+ D++TL +LA M SG +Y + F A L + Sbjct 147 VTALLELVDEHKVGLDDPIGKYVDGVPNGDKITLRELAGMRSGLFNYTEDDGFFKA-LTS 205 Query 159 NPFRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLS 218 +P R +T Q+LLD P+L+ PG ++Y +TN +LLGL +EKA G+ + +++ VL Sbjct 206 DPRRPFTPQQLLDYAFKHPVLFPPGEKFSYCNTNLILLGLVVEKAGGRPLGDFIRQNVLE 265 Query 219 PLGLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTT 278 P G+ T+ A P P +T + E +T WNPSW GA+ + Sbjct 266 PAGMNHTSLPADAAFPNPHAQGYTDQTATGE--------VENATDWNPSWGWAAGAM-IS 316 Query 279 TIYDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVIS 338 + D+ A + +G L DS V+ + R T PT G YGLGI Sbjct 317 DLDDLRTWARTVATGILPDGDSLISPVTQKQRLNT-----PPTTIP---GAGYGLGIFNV 368 Query 339 GHWLLQNPMFAGYAAVEAYLPSQRVAVAV 367 W+ N GY ++ YLPS + + V Sbjct 369 QGWIGHNGSLPGYESLTIYLPSAQATLVV 397 >gi|328886077|emb|CCA59316.1| Beta-lactamase class C and other penicillin binding proteins [Streptomyces venezuelae ATCC 10712] Length=400 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 114/384 (30%), Positives = 182/384 (48%), Gaps = 39/384 (10%) Query 20 CAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVRVTVAGKEVVTRAVG--DSM 77 C P GP + AK D R + D QA++ V+V + + GK +A G D Sbjct 44 CPPGGLGPELT-----AKLD---RTIEDVRKQANIPGVVVGLWMPGKGSYVKATGVADKA 95 Query 78 TGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQ 137 T P R G+ ++ T LLKLVD+ ++RLDD + +++ P +R+TL QLA+ Sbjct 96 TRRPMFADTFARIGSETKTFTVTALLKLVDDGRVRLDDPIGKYVHGVPKGNRITLRQLAE 155 Query 138 MTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLG 197 M SG Y +E F +L ++P R +T +E L + PG + Y+++N +LLG Sbjct 156 MRSGLFPYT-ADEDFIHDLLSDPQRTFTPEESLAYGYKHKNTFAPGARFQYSNSNLVLLG 214 Query 198 LALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPF 257 L +EK G+ + ++ R+VL P L T + PEP +T + + V Sbjct 215 LVVEKVTGRPLAEVIDRRVLRPAHLRHTLFPEGAEFPEPHARGYTDQ-----TLDGSV-- 267 Query 258 YEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQP 317 ++T WNPSW GA+ + ++D+ A + +G LLS ++ + + Sbjct 268 -ADATDWNPSWAWAAGAM-ISDLHDLRRWAKVVATGELLSPETQAQRLKM---------- 315 Query 318 GCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPSQRVAVAVAVTYAPEAFD 377 PT F G SYGLGI+ S W+ N GY V YLPS++ + + + D Sbjct 316 -LPTGFP---GTSYGLGILNSDGWIGHNGSIPGYETVTVYLPSKKATLVLIINT-----D 366 Query 378 DQGNYRNQADILFRKIGAEVAPND 401 + + +L R I V P++ Sbjct 367 SLVGGQEPSTLLARAITQVVTPDN 390 >gi|254387017|ref|ZP_05002296.1| beta-lactamase [Streptomyces sp. Mg1] gi|194345841|gb|EDX26807.1| beta-lactamase [Streptomyces sp. Mg1] Length=410 Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 109/360 (31%), Positives = 172/360 (48%), Gaps = 25/360 (6%) Query 49 MTQAHLKAVLVRVTVAGKEVVTRAVG--DSMTGVPATTAMHFRNGAVAISYVATLLLKLV 106 M +A + V V + + G + R+ G D TGVP T MH R G+V ++ T +L+LV Sbjct 52 MRRAAIPGVGVGLWIDGDDSYVRSFGTSDKATGVPFKTDMHTRIGSVTKTFAITAVLQLV 111 Query 107 DEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTT 166 D+ ++RLD +S +L P +R+T+ QLA M SG +Y + + A A+P R WT Sbjct 112 DDGRVRLDAPVSTYLDGVPGGERITVRQLADMRSGLYNYT-EDPRWLATFKADPHRAWTP 170 Query 167 QELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATA 226 +ELL + PG W Y++TN +LLG+ +EK +GQ + T L++ V P GL AT+ Sbjct 171 RELLAIAFRHHADFPPGARWEYSNTNTVLLGVLVEKISGQPLHTYLKQHVFEPAGLAATS 230 Query 227 NSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEAT 286 I P +H +T+ P G +++ WNPSW GA+ T+T+ D+ + Sbjct 231 LPTGAEIASPFVHGYTN------FTPDGATV--DASTWNPSWGWAAGAV-TSTMDDLRSW 281 Query 287 AVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNP 346 + SGRL + + + R + PT + YGLGI W+ N Sbjct 282 VPTLVSGRLPDGERLLEPATQAQRLRV-----LPTGYPD---VRYGLGIADIDGWVGHNG 333 Query 347 MFAGYAAVEAYLPSQRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMP 406 GY + LP R + + V D G + + + ++ + V P +P Sbjct 334 ELPGYETIAVRLPQARATLVIVVNS-----DVDGKFGSLSGLIANAVTKIVTPEHVWALP 388 >gi|226363068|ref|YP_002780850.1| S12 family peptidase [Rhodococcus opacus B4] gi|226241557|dbj|BAH51905.1| putative S12 family peptidase [Rhodococcus opacus B4] Length=374 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 112/361 (32%), Positives = 171/361 (48%), Gaps = 35/361 (9%) Query 49 MTQAHLKAVLVRVTVAGKEVVTRAVG--DSMTGVPATTAMHFRNGAVAISYVATLLLKLV 106 M +A L +V V G E +A G D+ TG P + R G++ ++ T +L+LV Sbjct 46 MERAALPGAIVGVWQDGAEPYVQAFGVRDTATGDPMAPDLFMRVGSLTKTFTTTAVLQLV 105 Query 107 DEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTT 166 D+ K+ LDD +SR++P P+ + +TL QLA M SG DY +E L + P RQWT Sbjct 106 DQGKVGLDDPISRYVPGVPNGEAITLRQLAAMRSGLFDY---SEVVIPALPSQPQRQWTP 162 Query 167 QELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATA 226 QELL SRP L+ PGT ++Y++TN LLGL +E+A+G + + ++ P L T+ Sbjct 163 QELLAISFSRPPLFAPGTAFDYSNTNTALLGLVVEEASGLPLDAYIAERITGPENLDDTS 222 Query 227 NSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEAT 286 T AIP P ++ A ++T W+PSW G + +T+ D+ Sbjct 223 VPTTAAIPSPHAQGYSKTSDGATV---------DATDWSPSWGFGAGNM-ISTLDDLRVW 272 Query 287 AVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNP 346 + G LLS + + + + QP + G YGLG+ W+ N Sbjct 273 VRDLAEGTLLSPATQHE--------REQFQPAP----SEGTGSLYGLGVENQNGWIGHNG 320 Query 347 MFAGYAAVEAYLPSQRVAVAVAVTYAPEAFDDQGNYRNQADILFRKIGAEVAPNDAPPMP 406 AG+ YLP++ V V V D G + F +I ++P+ P P Sbjct 321 NIAGFQTYAYYLPAEAKTVVVLVN---SNTDPLGVWN-----FFTEIVKIISPDRPWPAP 372 Query 407 P 407 P Sbjct 373 P 373 >gi|302535239|ref|ZP_07287581.1| beta-lactamase [Streptomyces sp. C] gi|302444134|gb|EFL15950.1| beta-lactamase [Streptomyces sp. C] Length=406 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 100/325 (31%), Positives = 156/325 (48%), Gaps = 27/325 (8%) Query 45 VRDFMTQAHLKAVLVRVTVAGKEVVTRAVG--DSMTGVPATTAMHFRNGAVAISYVATLL 102 VR + +A + V+V ++ GK RA G D TG P T ++ R G+V ++ T L Sbjct 66 VRKVLKEAGVPGVVVALSAPGKGEYVRAFGTADRATGAPMRTDVNQRIGSVTKTFTVTAL 125 Query 103 LKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFR 162 L+LVD K LDD + +++ P+ DR+TL QLA M SG +Y +E F L A+P R Sbjct 126 LQLVDAGKAGLDDPVGKYVAGVPNGDRITLRQLAGMRSGLYNYSE-DEGFFKALTADPRR 184 Query 163 QWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGL 222 +T QELL P+L++PG ++Y +TN +LLGL +EK +G + + +V P GL Sbjct 185 PFTPQELLSYSFRHPVLFEPGAKFDYCNTNTILLGLVVEKLSGLPLNRYVDERVAGPAGL 244 Query 223 TATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYD 282 T P+P +T + + E++ WNPSW GA+ + + D Sbjct 245 HHTVFPTGAGFPDPHAQGYTDQTASGKT--------EDAADWNPSWGWAAGAM-ISDLPD 295 Query 283 MEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWL 342 + + A + +G LL+ + + + E G YGLG+ W+ Sbjct 296 LRSWAKTLATGTLLTPATQAQRLK---------------VVEALPGAGYGLGVFDVQGWI 340 Query 343 LQNPMFAGYAAVEAYLPSQRVAVAV 367 N GY + YLP + + V Sbjct 341 GHNGSLPGYQDLVVYLPGPQATLVV 365 >gi|269928638|ref|YP_003320959.1| beta-lactamase [Sphaerobacter thermophilus DSM 20745] gi|269787995|gb|ACZ40137.1| beta-lactamase [Sphaerobacter thermophilus DSM 20745] Length=576 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 95/299 (32%), Positives = 146/299 (49%), Gaps = 24/299 (8%) Query 64 AGKEVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRWLPD 123 G + T V D +TG+P H R G+V + ATL+L+LVDE +L LDD + +W Sbjct 256 VGDWLGTIGVADPITGMPYYLDTHHRIGSVNKTMTATLILQLVDEGQLSLDDTIDQWFDG 315 Query 124 FPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLYDPG 183 + D++T+ L MTSG ++ L N + + +ANP R + QE++ ++PG Sbjct 316 VTYGDQITVRMLLNMTSGIGNFTL-NPRWQEDFFANPERVFDPQEIVAYGIEMEPSFEPG 374 Query 184 TNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATA--NSDTPAIPEPALHAF 241 W Y++TNY++LGL +E GQD+ L Q ++ PLGL T D ++PEP Sbjct 375 AGWEYSNTNYVMLGLIVEAVTGQDIRDLYQERIFEPLGLDETTFPEPDDASLPEPYARGV 434 Query 242 TSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADSY 301 T + +P P ++T WNPSW G + +T D+ A + +G L+S + + Sbjct 435 TWQ-----GLP---PEIRDATNWNPSWAYAAGQM-ISTADDLRVWARALATGELVSEEMH 485 Query 302 KKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPS 360 + ++ + P P YGLGIV WL + GY V Y P Sbjct 486 AEQLT-----WVQVVPDVPEV-------GYGLGIVNDFGWLGHDGTVFGYDTVMLYRPD 532 >gi|118471628|ref|YP_885965.1| beta-lactamase [Mycobacterium smegmatis str. MC2 155] gi|118172915|gb|ABK73811.1| beta-lactamase [Mycobacterium smegmatis str. MC2 155] Length=374 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 98/298 (33%), Positives = 149/298 (50%), Gaps = 26/298 (8%) Query 72 AVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRWLPDFPHADRVT 131 V D+ T P M+ R G++ ++ T LL L+D+ K LDD +S ++ D P D +T Sbjct 76 GVADTATRAPMQADMYTRIGSLTKTFTITALLTLIDQGKAGLDDPISMYVADVPSGDTIT 135 Query 132 LGQLAQMTSGYPDYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLYDPGTNWNYAHT 191 L LAQM SG Y G F+A A+P R +T Q+LL +PL + PGT ++Y +T Sbjct 136 LRHLAQMQSGLVTYD-GVPEFEAAFLADPQRTFTPQQLLGYALDKPLQFPPGTQYDYCNT 194 Query 192 NYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHAFTSERRAALKI 251 N +LLGL +EK +GQ + +++ +L PL LT T+ +PA PEP +T + Sbjct 195 NTVLLGLVVEKLSGQSLADYVRQHILVPLKLTHTSIPTSPAFPEPHPQGYT--------V 246 Query 252 PAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADSYKKMVSTELRG 311 G P +T WNPSW ++G + +T+ DM A + SG LLS + + T L Sbjct 247 LDGTP--RVTTDWNPSWAWSNGNM-ISTLDDMRVWAQKLSSGELLSENLRDERFRTALPM 303 Query 312 KTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPSQRVAVAVAV 369 A+ YG+G + W+ + + G+ V LP + + V V Sbjct 304 SENAK--------------YGVGAFDTNGWIGHSGITPGFETVVVGLPEAQSTLVVFV 347 >gi|118472409|ref|YP_887685.1| beta-lactamase [Mycobacterium smegmatis str. MC2 155] gi|118173696|gb|ABK74592.1| beta-lactamase [Mycobacterium smegmatis str. MC2 155] Length=390 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 105/368 (29%), Positives = 170/368 (47%), Gaps = 37/368 (10%) Query 9 CSVLALGLLAGCAPPRTGPASSPTNNGAKADAVIRIVRDFMTQAHLKAVLVRVTVAGK-- 66 + + L +LA PP + P A+ D R + + Q +V +++ G+ Sbjct 7 SATILLAILALVVPPPV--TAQPLELAARLD---RAIEARLAQMGAPGAIVSLSIPGEID 61 Query 67 EVVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRWLPDFPH 126 V T GD+ TGVP H R G+V ++ T +L+LV++ ++RL D +SR++ P Sbjct 62 YVKTFGAGDTATGVPMLVDNHHRIGSVTKTFTGTAILQLVEQGRIRLSDPISRYVEGVPS 121 Query 127 ADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFR-----QWTTQELLDQISSRPLLYD 181 D +TL L +M SG DY + F LY + T +EL++ ++PL + Sbjct 122 GDVITLDLLGRMRSGLIDYTETGD-FIERLYRESPKGPDAFAVTPRELVESAFAQPLKFT 180 Query 182 PGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHAF 241 PG+ + Y++TN +LLG+ +EK +G + LQ + P+GL+ T+ +P P H + Sbjct 181 PGSRYEYSNTNTVLLGMVVEKVSGVPLGQYLQDNIFGPVGLSQTSYPGNGWLPGPYAHGY 240 Query 242 TSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADSY 301 A+ ++T WNPSW G I + ++DM +GSG LL D++ Sbjct 241 NRAPNDAIV---------DTTLWNPSWADAAGKI-VSNVHDMRTWTKVLGSGALLQPDTH 290 Query 302 KKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPSQ 361 + +S + PG F D + G W N GYA V YLP + Sbjct 291 AQRISN----GSEVVPGVDYAFTIFD---------VQG-WRGHNGDIPGYATVAVYLPQR 336 Query 362 RVAVAVAV 369 + V V Sbjct 337 DATLVVFV 344 >gi|302535493|ref|ZP_07287835.1| beta-lactamase [Streptomyces sp. C] gi|302444388|gb|EFL16204.1| beta-lactamase [Streptomyces sp. C] Length=398 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 101/326 (31%), Positives = 160/326 (50%), Gaps = 28/326 (8%) Query 45 VRDFMTQAHLKAVLVRVTVAGKE--VVTRAVGDSMTGVPATTAMHFRNGAVAISYVATLL 102 V+D + +A + V+V + GK V T V D TG T + R G+ ++ T L Sbjct 56 VQDTLREAKVPGVIVGLWAPGKGSYVKTFGVADKETGARMRTDFYTRIGSQTKTFTVTAL 115 Query 103 LKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAELYANPFR 162 L+LVD+ K+ LDD + ++ P+ DR+TL +LA M SG +Y ++AFD L R Sbjct 116 LRLVDQGKVGLDDPIGTYVSGVPNGDRITLRELAGMRSGLFNYS-EDDAFDKALTTEGTR 174 Query 163 QWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKVLSPLGL 222 +T Q+LL P+ + P + Y++TN +LLGL +EK GQ + +L+++V+ P GL Sbjct 175 PFTPQQLLAYSFKHPVNFAPDAKFEYSNTNLILLGLVIEKVTGQPLQQVLKQQVIDPAGL 234 Query 223 TATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQTTTIYD 282 T A P P +T + + + A T WNPSW GA+ + + D Sbjct 235 HHTLFPTNAAFPSPHAQGYTDQSASGDIVNA--------TDWNPSWAWAAGAM-ISDLED 285 Query 283 MEATAVGIGSGRLLS-ADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIVISGHW 341 + + A + +G LL A +++ +T + G P G YGLG+ W Sbjct 286 LRSWAKTLATGTLLKPATQAERLKTTSV--------GIP-------GAGYGLGLFDVQGW 330 Query 342 LLQNPMFAGYAAVEAYLPSQRVAVAV 367 + N GY ++ YLP +R + V Sbjct 331 IGHNGSLPGYESLGVYLPEERATLVV 356 >gi|311893876|dbj|BAJ26284.1| putative beta-lactamase [Kitasatospora setae KM-6054] Length=409 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 119/397 (30%), Positives = 175/397 (45%), Gaps = 55/397 (13%) Query 1 MPVLRR-----LGCSVLALGLL-----------AGCAPPRTGPASSPTNN---------- 34 MPV+RR L ++LAL L A A P PA P + Sbjct 1 MPVMRRPRARRLAVALLALSTLVPAAPAAADSGAPFARPALKPAHRPVHPPADEDCPLDP 60 Query 35 --GAKADAVIRIVRDFMTQAHLKAVLVRVTVAGKEVVTRA--VGDSMTGVPATTAMHFRN 90 A+ DA I VR+ + V+V + + G+ A V D TG P T ++ R Sbjct 61 ALAARLDAAIADVRE---RTGTPGVIVGLWLPGRGTYVHADGVADRATGQPMTPNLNLRI 117 Query 91 GAVAISYVATLLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNE 150 G+ ++ T +L+LVD L LDD + ++L P +T+ QLA+M SG Y ++ Sbjct 118 GSETKTFTVTAVLELVDRGLLGLDDPIGKYLDGVPDGAHITIRQLAEMRSGLYSYTFDDD 177 Query 151 AFDAELYANPFRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPT 210 F L +P R ++ QELL ++ PGT++ Y++TN +LLGL +EK + Sbjct 178 -FVQALLTDPERPFSPQELLSYAFKHDNVFPPGTDYQYSNTNTVLLGLLVEKLGRMPLRD 236 Query 211 LLQRKVLSPLGLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTI 270 + R V P L T +P P H +T + +ST WNPSW Sbjct 237 FIHRNVTGPARLNHTLFPRAAELPRPYAHGYTDQTLDGSTT--------DSTHWNPSWGW 288 Query 271 THGAIQTTTIYDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYS 330 GA+ + ++D+ A + +G LLS + + R K R PG DG Sbjct 289 AAGAM-ISDLHDLHRWAKTLATGTLLSPATQAE------REKFRPVPGF------GDGAG 335 Query 331 YGLGIVISGHWLLQNPMFAGYAAVEAYLPSQRVAVAV 367 YGLG+ G W+ N GY +V YLP Q + V Sbjct 336 YGLGLFRVGGWVGHNGSLPGYESVTLYLPEQDATLVV 372 >gi|284046611|ref|YP_003396951.1| beta-lactamase [Conexibacter woesei DSM 14684] gi|283950832|gb|ADB53576.1| beta-lactamase [Conexibacter woesei DSM 14684] Length=713 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 103/342 (31%), Positives = 163/342 (48%), Gaps = 28/342 (8%) Query 28 ASSPTNNGA-KADAVI-RIVRDFMTQAHLKAVLVRVTVAGKEVVTRAVG--DSMTGVPAT 83 AS P + A K DA + R +R + +V V G+ R+ G ++ T P Sbjct 22 ASVPQASAAPKRDAALTRSIRRALATTAAPGAIVGVWQQGRAPYVRSFGVRNTATRRPMR 81 Query 84 TAMHFRNGAVAISYVATLLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYP 143 + ++ R G+V ++ T LL+LVD K+ LDD +S+++P D +TL QLA M SG Sbjct 82 SDLYMRIGSVTKTFTVTALLQLVDAGKVALDDPISKYVPGVISGDTITLRQLATMRSGLV 141 Query 144 DYVLGNEAFDAELYANPFRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKA 203 +Y E+ D L +PF WT QELL PLL+ PGT ++Y++TN +LLGL +E+ Sbjct 142 NYS-ATESVDRALTDHPFNAWTPQELLSPAIGEPLLFAPGTGFSYSNTNTILLGLVVERV 200 Query 204 AGQDMPTLLQRKVLSPLGLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTF 263 +G+ + ++R + +PLG+ T+ P P + A P G +T Sbjct 201 SGERLGAYIRRHITAPLGMRQTSFPAGTGFPSPHAQGY------ADSTPDG--RVANATS 252 Query 264 WNPSWTITHGAIQTTTIYDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCF 323 W+P+WT G + +T+ D+ A + SGR L + +++ + G T Sbjct 253 WDPTWTWAAGQM-VSTLRDLRIWAPRLVSGRGLLSARTQRLRLASVAGATP--------- 302 Query 324 EQNDGYSYGLGIVISGHWLLQNPMFAGYAAVEAYLPSQRVAV 365 YG+G+ WL N GY + Y P + V Sbjct 303 -----IVYGIGMFNVSGWLGHNGSLPGYQTLSLYRPQTKTTV 339 >gi|240172313|ref|ZP_04750972.1| serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium kansasii ATCC 12478] Length=398 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 109/374 (30%), Positives = 173/374 (47%), Gaps = 49/374 (13%) Query 43 RIVRDFMTQAHLKAVLVRVTVAGKEVVTRAVG--DSMTGVPATTAMHFRNGAVAISYVAT 100 +++ M +A + L+ V G+ RA G D+ TG P T MH R G+V ++ T Sbjct 64 QVIPAGMAEASVPGALIGVWKPGEAPYVRAFGLSDTTTGAPMATDMHMRIGSVTKTFTTT 123 Query 101 LLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVL-------GNEAFD 153 +L+LVD+ K+ LDD + +++P P+ D +TL QL QM SG DY G E Sbjct 124 AILQLVDQGKVGLDDPIGKYVPGIPNGDVITLRQLGQMRSGLFDYSTETAPPKPGEEG-- 181 Query 154 AELYANPFRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQ 213 RQ T +EL+ +S P + PG ++Y++TN +LLG+ ++K A Q + ++ Sbjct 182 --------RQRTPEELIQIAASHPPAFPPGAQFDYSNTNTVLLGMVVQKVARQSLTDFIR 233 Query 214 RKVLSPLGLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHG 273 + PL + T IP P H +T RR +I +++T +NPSW G Sbjct 234 EHITQPLNMQHTVLPVGAEIPSPHAHGYT--RRPGGQI-------QDATDFNPSWGWAAG 284 Query 274 AIQTTTIYDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGL 333 A+ +T+ DM A + G LLS + + + L P+ + G YG Sbjct 285 AM-VSTLDDMRIWARNVAEGGLLSKAAQAQRLEFLL---------APS---EGTGTLYGF 331 Query 334 GIVISGHWLLQNPMFAGYAAVEAYLPSQRVAVAVAVTYAPEAFDDQGNYRNQADILFRKI 393 G+ W+ N GY + +LP++ + + V E G + F KI Sbjct 332 GLENQNAWIGHNGNIPGYQSYVYHLPAEGTTMLMLVNSNVEVL---GVWN-----FFTKI 383 Query 394 GAEVAPNDAPPMPP 407 V+P + P PP Sbjct 384 ANIVSPAHSWPKPP 397 >gi|120404007|ref|YP_953836.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium vanbaalenii PYR-1] gi|119956825|gb|ABM13830.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium vanbaalenii PYR-1] Length=406 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 99/331 (30%), Positives = 165/331 (50%), Gaps = 29/331 (8%) Query 39 DAVIRIVRDFMTQAHLKAVLVRVTVAGKEVVTRAVG--DSMTGVPATTAMHFRNGAVAIS 96 DAV R+ MT+A + +V + G + V RA G D+ T P T + R G++ + Sbjct 69 DAVERV----MTEAGIPGAIVGIWGPGGDYV-RAFGVADTKTRAPMKTDFYSRIGSLTKT 123 Query 97 YVATLLLKLVDEKKLRLDDKLSRWLPDFPHADRVTLGQLAQMTSGYPDYVLGNEAFDAEL 156 + T +L L D+ +L LDD ++ ++ P D +TL QLA+M SG PDY N F + Sbjct 124 FTVTAVLLLADQGRLGLDDPIAGYVDGVPGGDAITLRQLARMQSGLPDYT-ANPEFVPTV 182 Query 157 YANPFRQWTTQELLDQISSRPLLYDPGTNWNYAHTNYLLLGLALEKAAGQDMPTLLQRKV 216 A+P R + E+L+ S+P ++ PG ++Y++TN +LLGL +EK +GQ + ++R + Sbjct 183 IADPGRAFAPTEMLEFAFSQPPMFAPGDGYHYSNTNTVLLGLVVEKVSGQSLGDYIRRHI 242 Query 217 LSPLGLTATANSDTPAIPEPALHAFTSERRAALKIPAGVPFYEESTFWNPSWTITHGAIQ 276 +PLG+ T+ P P +T + ++ A T WN SW+ G + Sbjct 243 SAPLGMAETSFPTDATFPGPHATGYTVQPPDDREMTA--------TDWNLSWSWAAGNM- 293 Query 277 TTTIYDMEATAVGIGSGRLLSADSYKKMVSTELRGKTRAQPGCPTCFEQNDGYSYGLGIV 336 +T++D+ A + +G LLS ++ + ++ QP YGLG+ Sbjct 294 VSTLHDLRIWAPALVTGTLLSRQMQQQRLQMV---ESSGQPAPE---------EYGLGMF 341 Query 337 ISGHWLLQNPMFAGYAAVEAYLPSQRVAVAV 367 W+ N GY V YLP ++ A+ + Sbjct 342 NVAGWIGHNGSVPGYQTVSVYLPERQTALVI 372 Lambda K H 0.318 0.134 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 816290083944 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40