BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0415 Length=340 Score E Sequences producing significant alignments: (Bits) Value gi|15607556|ref|NP_214929.1| thiamine biosynthesis oxidoreductas... 664 0.0 gi|289445954|ref|ZP_06435698.1| thiamine biosynthesis oxidoreduc... 662 0.0 gi|31791593|ref|NP_854086.1| thiamine biosynthesis oxidoreductas... 662 0.0 gi|253797338|ref|YP_003030339.1| thiamine biosynthesis oxidoredu... 662 0.0 gi|289748899|ref|ZP_06508277.1| thiamine biosynthesis oxidoreduc... 612 2e-173 gi|289441794|ref|ZP_06431538.1| glycine oxidase ThiO [Mycobacter... 572 3e-161 gi|342859105|ref|ZP_08715759.1| glycine oxidase ThiO [Mycobacter... 568 4e-160 gi|118465562|ref|YP_883873.1| glycine oxidase ThiO [Mycobacteriu... 567 8e-160 gi|240168881|ref|ZP_04747540.1| glycine oxidase ThiO [Mycobacter... 567 8e-160 gi|41409996|ref|NP_962832.1| hypothetical protein MAP3898 [Mycob... 563 2e-158 gi|296167873|ref|ZP_06850056.1| glycine oxidase ThiO [Mycobacter... 560 2e-157 gi|183980741|ref|YP_001849032.1| thiamine biosynthesis oxidoredu... 553 2e-155 gi|118618239|ref|YP_906571.1| thiamine biosynthesis oxidoreducta... 551 5e-155 gi|336460361|gb|EGO39261.1| glycine oxidase ThiO [Mycobacterium ... 543 2e-152 gi|15827072|ref|NP_301335.1| oxidoreductase [Mycobacterium lepra... 540 2e-151 gi|120401723|ref|YP_951552.1| glycine oxidase ThiO [Mycobacteriu... 513 1e-143 gi|333989026|ref|YP_004521640.1| thiamine biosynthesis oxidoredu... 510 1e-142 gi|254818978|ref|ZP_05223979.1| glycine oxidase ThiO [Mycobacter... 499 4e-139 gi|118470194|ref|YP_885196.1| glycine oxidase ThiO [Mycobacteriu... 493 2e-137 gi|108797525|ref|YP_637722.1| glycine oxidase ThiO [Mycobacteriu... 482 3e-134 gi|315442245|ref|YP_004075124.1| glycine oxidase [Mycobacterium ... 463 2e-128 gi|145220802|ref|YP_001131480.1| glycine oxidase ThiO [Mycobacte... 462 4e-128 gi|169631296|ref|YP_001704945.1| thiamine biosynthesis oxidoredu... 419 2e-115 gi|226304969|ref|YP_002764927.1| thiamine biosynthesis oxidoredu... 332 4e-89 gi|229492977|ref|ZP_04386772.1| glycine oxidase ThiO [Rhodococcu... 326 4e-87 gi|111019183|ref|YP_702155.1| D-amino acid dehydrogenase [Rhodoc... 317 2e-84 gi|226361319|ref|YP_002779097.1| thiamine biosynthesis oxidoredu... 313 3e-83 gi|325673937|ref|ZP_08153627.1| glycine oxidase ThiO [Rhodococcu... 301 9e-80 gi|312141233|ref|YP_004008569.1| d-amino acid oxidase [Rhodococc... 296 2e-78 gi|54027313|ref|YP_121555.1| putative amino acid oxidase [Nocard... 272 5e-71 gi|333918212|ref|YP_004491793.1| glycine oxidase ThiO [Amycolici... 266 4e-69 gi|262204215|ref|YP_003275423.1| glycine oxidase ThiO [Gordonia ... 250 2e-64 gi|296141422|ref|YP_003648665.1| glycine oxidase ThiO [Tsukamure... 243 2e-62 gi|256374561|ref|YP_003098221.1| glycine oxidase ThiO [Actinosyn... 233 3e-59 gi|343924498|ref|ZP_08764047.1| thiamine biosynthesis oxidoreduc... 227 2e-57 gi|300790384|ref|YP_003770675.1| glycine oxidase [Amycolatopsis ... 226 3e-57 gi|326384630|ref|ZP_08206308.1| glycine oxidase ThiO [Gordonia n... 225 7e-57 gi|134097117|ref|YP_001102778.1| amino acid oxidase flavoprotein... 215 9e-54 gi|331699485|ref|YP_004335724.1| glycine oxidase ThiO [Pseudonoc... 207 2e-51 gi|302530627|ref|ZP_07282969.1| glycine oxidase ThiO [Streptomyc... 201 1e-49 gi|257057423|ref|YP_003135255.1| glycine oxidase [Saccharomonosp... 199 5e-49 gi|319948302|ref|ZP_08022449.1| thiamine biosynthesis oxidoreduc... 187 2e-45 gi|334564778|ref|ZP_08517769.1| d-amino acid oxidase [Corynebact... 187 2e-45 gi|296393652|ref|YP_003658536.1| glycine oxidase ThiO [Segnilipa... 187 2e-45 gi|291298438|ref|YP_003509716.1| glycine oxidase ThiO [Stackebra... 186 4e-45 gi|336119793|ref|YP_004574570.1| glycine oxidase [Microlunatus p... 179 5e-43 gi|315501393|ref|YP_004080280.1| glycine oxidase thio [Micromono... 176 7e-42 gi|117928197|ref|YP_872748.1| glycine oxidase ThiO [Acidothermus... 172 5e-41 gi|302869932|ref|YP_003838569.1| glycine oxidase ThiO [Micromono... 166 6e-39 gi|145596399|ref|YP_001160696.1| glycine oxidase ThiO [Salinispo... 165 8e-39 >gi|15607556|ref|NP_214929.1| thiamine biosynthesis oxidoreductase ThiO [Mycobacterium tuberculosis H37Rv] gi|15839801|ref|NP_334838.1| amino acid oxidase flavoprotein ThiO, putative [Mycobacterium tuberculosis CDC1551] gi|121636329|ref|YP_976552.1| putative thiamine biosynthesis oxidoreductase thiO [Mycobacterium bovis BCG str. Pasteur 1173P2] 61 more sequence titles Length=340 Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/340 (100%), Positives = 340/340 (100%), Gaps = 0/340 (0%) Query 1 MASDLHTGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPG 60 MASDLHTGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPG Sbjct 1 MASDLHTGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPG 60 Query 61 EERLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP 120 EERLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP Sbjct 61 EERLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP 120 Query 121 VIWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDV 180 VIWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDV Sbjct 121 VIWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDV 180 Query 181 DAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPR 240 DAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPR Sbjct 181 DAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPR 240 Query 241 SDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPL 300 SDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPL Sbjct 241 SDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPL 300 Query 301 VQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGAAS 340 VQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGAAS Sbjct 301 VQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGAAS 340 >gi|289445954|ref|ZP_06435698.1| thiamine biosynthesis oxidoreductase thiO [Mycobacterium tuberculosis CPHL_A] gi|289418912|gb|EFD16113.1| thiamine biosynthesis oxidoreductase thiO [Mycobacterium tuberculosis CPHL_A] Length=340 Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/340 (99%), Positives = 340/340 (100%), Gaps = 0/340 (0%) Query 1 MASDLHTGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPG 60 MASDLHTGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPG Sbjct 1 MASDLHTGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPG 60 Query 61 EERLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP 120 EERLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP Sbjct 61 EERLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP 120 Query 121 VIWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDV 180 VIW+SAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDV Sbjct 121 VIWKSAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDV 180 Query 181 DAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPR 240 DAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPR Sbjct 181 DAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPR 240 Query 241 SDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPL 300 SDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPL Sbjct 241 SDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPL 300 Query 301 VQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGAAS 340 VQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGAAS Sbjct 301 VQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGAAS 340 >gi|31791593|ref|NP_854086.1| thiamine biosynthesis oxidoreductase ThiO [Mycobacterium bovis AF2122/97] gi|31617179|emb|CAD93286.1| POSSIBLE THIAMINE BIOSYNTHESIS OXIDOREDUCTASE THIO [Mycobacterium bovis AF2122/97] Length=340 Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/340 (99%), Positives = 339/340 (99%), Gaps = 0/340 (0%) Query 1 MASDLHTGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPG 60 MASDLHTGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPG Sbjct 1 MASDLHTGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPG 60 Query 61 EERLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP 120 EERLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP Sbjct 61 EERLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP 120 Query 121 VIWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDV 180 VIWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLD LCRDCERLGVRWSSQVSSLSDV Sbjct 121 VIWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDVLCRDCERLGVRWSSQVSSLSDV 180 Query 181 DAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPR 240 DAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPR Sbjct 181 DAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPR 240 Query 241 SDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPL 300 SDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPL Sbjct 241 SDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPL 300 Query 301 VQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGAAS 340 VQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGAAS Sbjct 301 VQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGAAS 340 >gi|253797338|ref|YP_003030339.1| thiamine biosynthesis oxidoreductase thiO [Mycobacterium tuberculosis KZN 1435] gi|289552664|ref|ZP_06441874.1| thiamine biosynthesis oxidoreductase thiO [Mycobacterium tuberculosis KZN 605] gi|297632897|ref|ZP_06950677.1| thiamine biosynthesis oxidoreductase thiO [Mycobacterium tuberculosis KZN 4207] 6 more sequence titles Length=340 Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/340 (99%), Positives = 339/340 (99%), Gaps = 0/340 (0%) Query 1 MASDLHTGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPG 60 MASDLHTGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPG Sbjct 1 MASDLHTGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPG 60 Query 61 EERLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP 120 EERLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP Sbjct 61 EERLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP 120 Query 121 VIWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDV 180 VIWESAARD EPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDV Sbjct 121 VIWESAARDFEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDV 180 Query 181 DAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPR 240 DAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPR Sbjct 181 DAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPR 240 Query 241 SDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPL 300 SDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPL Sbjct 241 SDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPL 300 Query 301 VQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGAAS 340 VQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGAAS Sbjct 301 VQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGAAS 340 >gi|289748899|ref|ZP_06508277.1| thiamine biosynthesis oxidoreductase thiO [Mycobacterium tuberculosis T92] gi|289689486|gb|EFD56915.1| thiamine biosynthesis oxidoreductase thiO [Mycobacterium tuberculosis T92] Length=343 Score = 612 bits (1578), Expect = 2e-173, Method: Compositional matrix adjust. Identities = 320/331 (97%), Positives = 320/331 (97%), Gaps = 2/331 (0%) Query 12 VIGGGVI-GLSVARRAA-QAGWPVRVHRSDERGASWVAGGMLAPHSEGWPGEERLLRLGL 69 V GG V GLSV QAGW VRVHRSDERGASWVAGGMLAPHSEGWPGEERLLRLGL Sbjct 13 VSGGRVFSGLSVGPPGPPQAGWTVRVHRSDERGASWVAGGMLAPHSEGWPGEERLLRLGL 72 Query 70 QSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHPVIWESAARD 129 QSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHPVIWESAARD Sbjct 73 QSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHPVIWESAARD 132 Query 130 VEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDVDAHTVVIAN 189 VEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDVDAHTVVIAN Sbjct 133 VEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDVDAHTVVIAN 192 Query 190 GIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSDGVVVGAT 249 GIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSDGVVVGAT Sbjct 193 GIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSDGVVVGAT 252 Query 250 QYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQRLDSRTL 309 QYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQRLDSRTL Sbjct 253 QYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQRLDSRTL 312 Query 310 VAAGHGRSGFLLAPWTAEQIVSELVSVGAAS 340 VAAGHGRSGFLLAPWTAEQIVSELVSVGAAS Sbjct 313 VAAGHGRSGFLLAPWTAEQIVSELVSVGAAS 343 >gi|289441794|ref|ZP_06431538.1| glycine oxidase ThiO [Mycobacterium tuberculosis T46] gi|289414713|gb|EFD11953.1| glycine oxidase ThiO [Mycobacterium tuberculosis T46] Length=291 Score = 572 bits (1474), Expect = 3e-161, Method: Compositional matrix adjust. Identities = 291/291 (100%), Positives = 291/291 (100%), Gaps = 0/291 (0%) Query 50 MLAPHSEGWPGEERLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRT 109 MLAPHSEGWPGEERLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRT Sbjct 1 MLAPHSEGWPGEERLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRT 60 Query 110 VADWLSAQGHPVIWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVR 169 VADWLSAQGHPVIWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVR Sbjct 61 VADWLSAQGHPVIWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVR 120 Query 170 WSSQVSSLSDVDAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRAR 229 WSSQVSSLSDVDAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRAR Sbjct 121 WSSQVSSLSDVDAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRAR 180 Query 230 VRGRQVYLVPRSDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAG 289 VRGRQVYLVPRSDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAG Sbjct 181 VRGRQVYLVPRSDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAG 240 Query 290 LRPMTPDNLPLVQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGAAS 340 LRPMTPDNLPLVQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGAAS Sbjct 241 LRPMTPDNLPLVQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGAAS 291 >gi|342859105|ref|ZP_08715759.1| glycine oxidase ThiO [Mycobacterium colombiense CECT 3035] gi|342133346|gb|EGT86549.1| glycine oxidase ThiO [Mycobacterium colombiense CECT 3035] Length=340 Score = 568 bits (1464), Expect = 4e-160, Method: Compositional matrix adjust. Identities = 292/338 (87%), Positives = 309/338 (92%), Gaps = 0/338 (0%) Query 1 MASDLHTGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPG 60 M S GSLAVIGGGVIGL+VARRAAQAGW VRVHRSD++GASWVAGGMLAPHSEGWPG Sbjct 1 MPSGPPLGSLAVIGGGVIGLAVARRAAQAGWSVRVHRSDQKGASWVAGGMLAPHSEGWPG 60 Query 61 EERLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP 120 EERLLRLGL+SLRLWREG FLDGL ++VTA ESLVVAVDRADV DLRTVADWLSAQGHP Sbjct 61 EERLLRLGLESLRLWREGGFLDGLPVEVVTARESLVVAVDRADVEDLRTVADWLSAQGHP 120 Query 121 VIWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDV 180 V+WESAARDVEPLLAQGIRHGFRAPTELAVDNRA+++AL +CERLGV W+ V LS V Sbjct 121 VVWESAARDVEPLLAQGIRHGFRAPTELAVDNRAVVEALGAECERLGVAWAPAVRDLSRV 180 Query 181 DAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPR 240 + VVIANGIDAPALWPGLP+RPVKGEVLRLRWR GCMPLPQRV+RARV GRQVYLVPR Sbjct 181 EGDAVVIANGIDAPALWPGLPVRPVKGEVLRLRWRKGCMPLPQRVVRARVHGRQVYLVPR 240 Query 241 SDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPL 300 +DGVVVGATQYEHGRDTAPVVSGVRDLLDDAC VLPALGEYELAEC AGLRPMTPDNLPL Sbjct 241 ADGVVVGATQYEHGRDTAPVVSGVRDLLDDACAVLPALGEYELAECAAGLRPMTPDNLPL 300 Query 301 VQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGA 338 V RLD+RTLVAAGHGRSGFLLAPWTAEQIVSEL VGA Sbjct 301 VHRLDARTLVAAGHGRSGFLLAPWTAEQIVSELALVGA 338 >gi|118465562|ref|YP_883873.1| glycine oxidase ThiO [Mycobacterium avium 104] gi|254777185|ref|ZP_05218701.1| glycine oxidase ThiO [Mycobacterium avium subsp. avium ATCC 25291] gi|118166849|gb|ABK67746.1| glycine oxidase ThiO [Mycobacterium avium 104] Length=338 Score = 567 bits (1462), Expect = 8e-160, Method: Compositional matrix adjust. Identities = 295/338 (88%), Positives = 310/338 (92%), Gaps = 2/338 (0%) Query 1 MASDLHTGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPG 60 M SD GSLAV+GGGVIGL+VARRAAQAGW VRVHRS ERGASWVAGGMLAPHSEGWPG Sbjct 1 MPSD--CGSLAVVGGGVIGLAVARRAAQAGWSVRVHRSGERGASWVAGGMLAPHSEGWPG 58 Query 61 EERLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP 120 EERLLRLGL+SLRLWREG FLDGL +LVTA ESLVVAVDRADVADLRTVADWLSAQGHP Sbjct 59 EERLLRLGLESLRLWREGGFLDGLPGRLVTARESLVVAVDRADVADLRTVADWLSAQGHP 118 Query 121 VIWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDV 180 V+WESAARDVEPLLAQGIRHGF APTELAVDNRA+L+AL CERLGVRW+ + L++ Sbjct 119 VVWESAARDVEPLLAQGIRHGFTAPTELAVDNRAVLEALDAACERLGVRWAPPLHDLAEA 178 Query 181 DAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPR 240 DA VVIANGIDAPALWPGLP+RPVKGEVLRLRWR GCMP+PQRVIRARV GRQVYLVPR Sbjct 179 DADAVVIANGIDAPALWPGLPVRPVKGEVLRLRWRKGCMPVPQRVIRARVHGRQVYLVPR 238 Query 241 SDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPL 300 +DGVVVGATQYEHGRDTAPVVSGVRDLLDDAC VLPALGEYELAEC AGLRPMTPDNLPL Sbjct 239 ADGVVVGATQYEHGRDTAPVVSGVRDLLDDACAVLPALGEYELAECGAGLRPMTPDNLPL 298 Query 301 VQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGA 338 V RLD+RTLVAAGHGRSGFLLAPWTAEQIVSEL VGA Sbjct 299 VGRLDARTLVAAGHGRSGFLLAPWTAEQIVSELAPVGA 336 >gi|240168881|ref|ZP_04747540.1| glycine oxidase ThiO [Mycobacterium kansasii ATCC 12478] Length=340 Score = 567 bits (1462), Expect = 8e-160, Method: Compositional matrix adjust. Identities = 288/340 (85%), Positives = 309/340 (91%), Gaps = 0/340 (0%) Query 1 MASDLHTGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPG 60 M++ GSLAVIGGGVIGLSVARRAA+AGW VRVHR E GASWVAGGM+APHSEGWPG Sbjct 1 MSAPTPAGSLAVIGGGVIGLSVARRAARAGWSVRVHRGGEHGASWVAGGMIAPHSEGWPG 60 Query 61 EERLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP 120 EERLLRLGL+SLRLW +G FLDGL +VTA ESLVVAVDRADVADLRTVADWLS QGHP Sbjct 61 EERLLRLGLESLRLWHDGGFLDGLPSHVVTARESLVVAVDRADVADLRTVADWLSQQGHP 120 Query 121 VIWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDV 180 V+WESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDAL DCERLGV W++ V+ LSD Sbjct 121 VVWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALTVDCERLGVAWAAPVTGLSDA 180 Query 181 DAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPR 240 + VVIANGIDAPALWPGLP+RPVKGEVLRLRWR GCMPLP+RVIRARV GRQVYLVPR Sbjct 181 EGDVVVIANGIDAPALWPGLPVRPVKGEVLRLRWRKGCMPLPRRVIRARVHGRQVYLVPR 240 Query 241 SDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPL 300 +DGVVVGATQYEHGRDTAPVVSGVRDLLDDAC VLP LGEYELAEC AGLRPMTPDNLP+ Sbjct 241 ADGVVVGATQYEHGRDTAPVVSGVRDLLDDACAVLPVLGEYELAECSAGLRPMTPDNLPI 300 Query 301 VQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGAAS 340 VQRLD+RTLVAAGHGRSGFLLAPWTAEQI+ EL +VGA++ Sbjct 301 VQRLDARTLVAAGHGRSGFLLAPWTAEQIMCELAAVGASA 340 >gi|41409996|ref|NP_962832.1| hypothetical protein MAP3898 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398829|gb|AAS06448.1| hypothetical protein MAP_3898 [Mycobacterium avium subsp. paratuberculosis K-10] Length=359 Score = 563 bits (1450), Expect = 2e-158, Method: Compositional matrix adjust. Identities = 293/338 (87%), Positives = 309/338 (92%), Gaps = 2/338 (0%) Query 1 MASDLHTGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPG 60 M SD GSLAV+GGGVIGL+VARRAAQAGW VRVHRS ERGASWVAGGMLAPHSEGWPG Sbjct 22 MPSD--CGSLAVVGGGVIGLAVARRAAQAGWSVRVHRSGERGASWVAGGMLAPHSEGWPG 79 Query 61 EERLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP 120 EERLLRLGL+SLRLWREG FLDGL +LVTA ESLVVAVDRADVADLRTVADWLSAQGHP Sbjct 80 EERLLRLGLESLRLWREGGFLDGLPGRLVTARESLVVAVDRADVADLRTVADWLSAQGHP 139 Query 121 VIWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDV 180 V+WESAARDVEPLLAQGIRHGF APTELAVDNRA+L+AL CERLGVRW+ + L++ Sbjct 140 VVWESAARDVEPLLAQGIRHGFTAPTELAVDNRAVLEALDAACERLGVRWAPPLHDLAEA 199 Query 181 DAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPR 240 DA VVIANGIDA ALWPGLP+RPVKGEVLRLRWR GCMP+PQRVIRAR+ GRQVYLVPR Sbjct 200 DADAVVIANGIDAQALWPGLPVRPVKGEVLRLRWRKGCMPVPQRVIRARMHGRQVYLVPR 259 Query 241 SDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPL 300 +DGVVVGATQYEHGRDTAPVVSGVRDLLDDAC VLPALGEYELAEC AGLRPMTPDNLPL Sbjct 260 ADGVVVGATQYEHGRDTAPVVSGVRDLLDDACAVLPALGEYELAECGAGLRPMTPDNLPL 319 Query 301 VQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGA 338 V RLD+RTLVAAGHGRSGFLLAPWTAEQIVSEL VGA Sbjct 320 VGRLDARTLVAAGHGRSGFLLAPWTAEQIVSELAPVGA 357 >gi|296167873|ref|ZP_06850056.1| glycine oxidase ThiO [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896998|gb|EFG76621.1| glycine oxidase ThiO [Mycobacterium parascrofulaceum ATCC BAA-614] Length=334 Score = 560 bits (1442), Expect = 2e-157, Method: Compositional matrix adjust. Identities = 287/330 (87%), Positives = 304/330 (93%), Gaps = 1/330 (0%) Query 9 SLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPGEERLLRLG 68 SLAVIGGGVIGL+VARRAAQAGW VRVHR+ GASWVAGGMLAPHSEGWPGEERLL+LG Sbjct 4 SLAVIGGGVIGLAVARRAAQAGWSVRVHRTGAAGASWVAGGMLAPHSEGWPGEERLLQLG 63 Query 69 LQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHPVIWESAAR 128 L+SLRLWREG FLDGL PQ++TA ESLVVAVDRADVADLRTVADWLSAQGHPV+WESAAR Sbjct 64 LESLRLWREGGFLDGLPPQVITARESLVVAVDRADVADLRTVADWLSAQGHPVVWESAAR 123 Query 129 DVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDVDAHTVVIA 188 D+EPLLAQGIRHGFRAPTELAVDNRA+L+AL +CERLGVRW+ L+ VD VVIA Sbjct 124 DLEPLLAQGIRHGFRAPTELAVDNRAVLEALAAECERLGVRWAPPARDLT-VDGDAVVIA 182 Query 189 NGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSDGVVVGA 248 NGIDAPALWPGLP+RPVKGEVLRLRWR GCMP+P+RVIRARV GRQVYLVPR+DGVVVGA Sbjct 183 NGIDAPALWPGLPVRPVKGEVLRLRWRRGCMPVPRRVIRARVHGRQVYLVPRADGVVVGA 242 Query 249 TQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQRLDSRT 308 TQYEHGRDTAPVVSGVRDLLDDAC VLPALGEYELAEC AGLRPMTPDNLPLVQRLD RT Sbjct 243 TQYEHGRDTAPVVSGVRDLLDDACAVLPALGEYELAECAAGLRPMTPDNLPLVQRLDERT 302 Query 309 LVAAGHGRSGFLLAPWTAEQIVSELVSVGA 338 LVA GHGRSGFLLAPWTAEQIVSEL VGA Sbjct 303 LVAGGHGRSGFLLAPWTAEQIVSELAPVGA 332 >gi|183980741|ref|YP_001849032.1| thiamine biosynthesis oxidoreductase ThiO [Mycobacterium marinum M] gi|183174067|gb|ACC39177.1| thiamine biosynthesis oxidoreductase ThiO [Mycobacterium marinum M] Length=339 Score = 553 bits (1425), Expect = 2e-155, Method: Compositional matrix adjust. Identities = 287/338 (85%), Positives = 299/338 (89%), Gaps = 0/338 (0%) Query 3 SDLHTGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPGEE 62 S GSLAVIGGGVIGLSVARRAAQAGW VRVHR E GASW AGGMLAPHSEGWPGEE Sbjct 2 SSPSMGSLAVIGGGVIGLSVARRAAQAGWAVRVHRRAEPGASWAAGGMLAPHSEGWPGEE 61 Query 63 RLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHPVI 122 RLLRLGL+SLRLW E FLDGL PQ+VTA ESLVVAVDRADVADLRTVADWLS QGHPV Sbjct 62 RLLRLGLESLRLWHESGFLDGLPPQVVTARESLVVAVDRADVADLRTVADWLSEQGHPVS 121 Query 123 WESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDVDA 182 WESAARDVEPLLAQGIRHGFRA TELAVDNRALLDAL DCER GV W+ V+ LSD Sbjct 122 WESAARDVEPLLAQGIRHGFRATTELAVDNRALLDALAVDCERRGVTWAGPVADLSDATG 181 Query 183 HTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSD 242 VVIANGIDAPALWPGLP+RPVKGEVLRLRWR GCMPL QRV+RARV GRQVYLVPR+D Sbjct 182 DAVVIANGIDAPALWPGLPVRPVKGEVLRLRWRKGCMPLLQRVVRARVHGRQVYLVPRAD 241 Query 243 GVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQ 302 GVVVGATQYEHGRD APVVSGVRDLL+DAC V+PALGEYELAEC AGLRPMTPDNLP+V Sbjct 242 GVVVGATQYEHGRDLAPVVSGVRDLLEDACAVMPALGEYELAECTAGLRPMTPDNLPIVG 301 Query 303 RLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGAAS 340 RLD+RTLVAAG GRSGFLLAPWTAEQIVSELV +GA S Sbjct 302 RLDARTLVAAGLGRSGFLLAPWTAEQIVSELVPIGAHS 339 >gi|118618239|ref|YP_906571.1| thiamine biosynthesis oxidoreductase ThiO [Mycobacterium ulcerans Agy99] gi|118570349|gb|ABL05100.1| thiamine biosynthesis oxidoreductase ThiO [Mycobacterium ulcerans Agy99] Length=339 Score = 551 bits (1420), Expect = 5e-155, Method: Compositional matrix adjust. Identities = 285/338 (85%), Positives = 298/338 (89%), Gaps = 0/338 (0%) Query 3 SDLHTGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPGEE 62 S GSLAVIGGGVIGLSVARRAAQAGW VRVHR E GASW AGGMLAPHSEGWPGEE Sbjct 2 SSPSMGSLAVIGGGVIGLSVARRAAQAGWAVRVHRRAEPGASWAAGGMLAPHSEGWPGEE 61 Query 63 RLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHPVI 122 RLLRLGL+SLRLW E FLDGL PQ+VTA ESL+VAVDRADVADLRTVADWLS QGHPV Sbjct 62 RLLRLGLESLRLWHESGFLDGLPPQVVTARESLMVAVDRADVADLRTVADWLSEQGHPVS 121 Query 123 WESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDVDA 182 WESAARDVEPLLAQGIRHGFRA TELAVDNRALLDAL DCER GV W+ V+ LSD Sbjct 122 WESAARDVEPLLAQGIRHGFRATTELAVDNRALLDALAVDCERRGVTWAGPVADLSDATG 181 Query 183 HTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSD 242 VVIANGIDAPALWPGLP+RPVKGEVLRLRWR GCMPL QRV+RARV GRQVYLVPR+D Sbjct 182 DAVVIANGIDAPALWPGLPVRPVKGEVLRLRWRKGCMPLLQRVVRARVHGRQVYLVPRAD 241 Query 243 GVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQ 302 GVVVGATQYEHGRD APVVSGVRDLL+DAC V+PALGEYE AEC AGLRPMTPDNLP+V Sbjct 242 GVVVGATQYEHGRDLAPVVSGVRDLLEDACAVMPALGEYEFAECTAGLRPMTPDNLPIVG 301 Query 303 RLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGAAS 340 RLD+RTLVAAG GRSGFLLAPWTAEQIVSELV +GA S Sbjct 302 RLDARTLVAAGLGRSGFLLAPWTAEQIVSELVPIGAHS 339 >gi|336460361|gb|EGO39261.1| glycine oxidase ThiO [Mycobacterium avium subsp. paratuberculosis S397] Length=319 Score = 543 bits (1398), Expect = 2e-152, Method: Compositional matrix adjust. Identities = 278/317 (88%), Positives = 293/317 (93%), Gaps = 0/317 (0%) Query 22 VARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPGEERLLRLGLQSLRLWREGSFL 81 +ARRAAQAGW VRVHRS ERGASWVAGGMLAPHSEGWPGEERLLRLGL+SLRLWREG FL Sbjct 1 MARRAAQAGWSVRVHRSGERGASWVAGGMLAPHSEGWPGEERLLRLGLESLRLWREGGFL 60 Query 82 DGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHPVIWESAARDVEPLLAQGIRHG 141 DGL +LVTA ESLVVAVDRADVADLRTVADWLSAQGHPV+WESAARDVEPLLAQGIRHG Sbjct 61 DGLPGRLVTARESLVVAVDRADVADLRTVADWLSAQGHPVVWESAARDVEPLLAQGIRHG 120 Query 142 FRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDVDAHTVVIANGIDAPALWPGLP 201 F APTELAVDNRA+L+AL CERLGVRW+ + L++ DA VVIANGIDAPALWPGLP Sbjct 121 FTAPTELAVDNRAVLEALDAACERLGVRWAPPLHDLAEADADAVVIANGIDAPALWPGLP 180 Query 202 IRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSDGVVVGATQYEHGRDTAPVV 261 +RPVKGEVLRLRWR GCMP+PQRVIRAR+ GRQVYLVPR+DGVVVGATQYEHGRDTAPVV Sbjct 181 VRPVKGEVLRLRWRKGCMPVPQRVIRARMHGRQVYLVPRADGVVVGATQYEHGRDTAPVV 240 Query 262 SGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQRLDSRTLVAAGHGRSGFLL 321 SGVRDLLDDAC VLPALGEYELAEC AGLRPMTPDNLPLV RLD+RTLVAAGHGRSGFLL Sbjct 241 SGVRDLLDDACAVLPALGEYELAECGAGLRPMTPDNLPLVGRLDARTLVAAGHGRSGFLL 300 Query 322 APWTAEQIVSELVSVGA 338 APWTAEQIVSEL VGA Sbjct 301 APWTAEQIVSELAPVGA 317 >gi|15827072|ref|NP_301335.1| oxidoreductase [Mycobacterium leprae TN] gi|221229550|ref|YP_002502966.1| putative oxidoreductase [Mycobacterium leprae Br4923] gi|4154054|emb|CAA22708.1| hypothetical protein MLCB1450.24 [Mycobacterium leprae] gi|13092620|emb|CAC29807.1| putative oxidoreductase [Mycobacterium leprae] gi|219932657|emb|CAR70392.1| putative oxidoreductase [Mycobacterium leprae Br4923] Length=340 Score = 540 bits (1390), Expect = 2e-151, Method: Compositional matrix adjust. Identities = 277/338 (82%), Positives = 298/338 (89%), Gaps = 0/338 (0%) Query 1 MASDLHTGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPG 60 M S GSLAVIGGGVIGLSVARRA QAGW VRVHR+ E+GASWVAGGMLAPHSEG PG Sbjct 1 MPSGPPAGSLAVIGGGVIGLSVARRAVQAGWSVRVHRTHEQGASWVAGGMLAPHSEGRPG 60 Query 61 EERLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP 120 EE+LL+LGL+SLRLW EG F D L P+++TA ESLVVAVD+ADVADLRTVADWLS QGHP Sbjct 61 EEQLLQLGLRSLRLWHEGGFTDRLAPEVITARESLVVAVDQADVADLRTVADWLSTQGHP 120 Query 121 VIWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDV 180 VIWESAARD+EPLLAQGIRHGF AP ELAVDNRALL LC DCERLGVRW+S V+ LS V Sbjct 121 VIWESAARDIEPLLAQGIRHGFWAPNELAVDNRALLAGLCLDCERLGVRWASPVNDLSCV 180 Query 181 DAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPR 240 +A VVIANGI APALWPGLP+RPVKGEVLRLRWR GCM L +R+IRA V GRQVYLVPR Sbjct 181 NADAVVIANGIGAPALWPGLPVRPVKGEVLRLRWRNGCMSLLKRLIRAHVHGRQVYLVPR 240 Query 241 SDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPL 300 +DGVVVGATQYEHG DTAPVVSGVRDLLDDAC VLP LGEYELAEC AGLRP TP+NLPL Sbjct 241 ADGVVVGATQYEHGYDTAPVVSGVRDLLDDACAVLPTLGEYELAECAAGLRPTTPNNLPL 300 Query 301 VQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGA 338 V RLD+RTLVAAGHGRSGFLLAPWTAEQI+ EL +VGA Sbjct 301 VHRLDNRTLVAAGHGRSGFLLAPWTAEQIMFELAAVGA 338 >gi|120401723|ref|YP_951552.1| glycine oxidase ThiO [Mycobacterium vanbaalenii PYR-1] gi|119954541|gb|ABM11546.1| glycine oxidase [Mycobacterium vanbaalenii PYR-1] Length=338 Score = 513 bits (1322), Expect = 1e-143, Method: Compositional matrix adjust. Identities = 264/330 (80%), Positives = 291/330 (89%), Gaps = 3/330 (0%) Query 6 HT-GSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPGEERL 64 HT G+LAVIGGGVIGLSVARRA Q GW VRVHR++ GASWVAGGMLAPHSEGWPGEERL Sbjct 4 HTRGTLAVIGGGVIGLSVARRALQDGWAVRVHRAERAGASWVAGGMLAPHSEGWPGEERL 63 Query 65 LRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHPVIWE 124 L++GL+SLRLWREG FLDGL P++VTA ESLVVAVD AD ADL+TVA WLS QGHPV Sbjct 64 LQIGLESLRLWREG-FLDGLPPEVVTARESLVVAVDPADAADLKTVAAWLSGQGHPVTLT 122 Query 125 SAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDVD-AH 183 ++AR+VEPLLAQGIRHGFRA TELAVDNRA++ AL +CERLGV W+ V++L+D A Sbjct 123 TSAREVEPLLAQGIRHGFRAETELAVDNRAVVAALAAECERLGVEWAPPVAALTDAGPAD 182 Query 184 TVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSDG 243 TVVIANGIDAP LWPGLP+RPVKGEVLRLRWR GC+P+PQRV+RARV GRQVY+VPR+DG Sbjct 183 TVVIANGIDAPTLWPGLPVRPVKGEVLRLRWRRGCLPVPQRVVRARVHGRQVYVVPRADG 242 Query 244 VVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQR 303 VVVGATQYEHGRDTAP VSGVRDLLDDAC V+PALGEYE AE AGLRPMTPDNLPLV R Sbjct 243 VVVGATQYEHGRDTAPTVSGVRDLLDDACAVMPALGEYEFAEAAAGLRPMTPDNLPLVGR 302 Query 304 LDSRTLVAAGHGRSGFLLAPWTAEQIVSEL 333 LD RTLVAAGHGRSGFLLAPWTAE I +EL Sbjct 303 LDERTLVAAGHGRSGFLLAPWTAESIAAEL 332 >gi|333989026|ref|YP_004521640.1| thiamine biosynthesis oxidoreductase ThiO [Mycobacterium sp. JDM601] gi|333484994|gb|AEF34386.1| thiamine biosynthesis oxidoreductase ThiO [Mycobacterium sp. JDM601] Length=336 Score = 510 bits (1314), Expect = 1e-142, Method: Compositional matrix adjust. Identities = 265/330 (81%), Positives = 290/330 (88%), Gaps = 2/330 (0%) Query 8 GSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPGEERLLRL 67 GSLAVIGGGVIGLSVA +AA+AGW VRVHR+ + GASWVAGGMLAPHSEGWPGE++ LRL Sbjct 7 GSLAVIGGGVIGLSVAMQAARAGWSVRVHRTADPGASWVAGGMLAPHSEGWPGEDQQLRL 66 Query 68 GLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHPVIWESAA 127 GL+SL LW + FL L ++VTA ESLVVA DRADVADLRTVADWL+AQGHPVIWESAA Sbjct 67 GLRSLELWHD--FLVRLPAEVVTARESLVVAADRADVADLRTVADWLTAQGHPVIWESAA 124 Query 128 RDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDVDAHTVVI 187 +VEPLLA GIRHGFRAPTELAVDNRA++ AL CE L V W+ V L++V A VVI Sbjct 125 GEVEPLLAAGIRHGFRAPTELAVDNRAVVTALVTACEELEVAWAGPVHDLAEVAADAVVI 184 Query 188 ANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSDGVVVG 247 ANGIDAPALWPGL IRPVKGEVLRLRWR GC+P+PQRVIRARV GRQVYLVPR DGVVVG Sbjct 185 ANGIDAPALWPGLAIRPVKGEVLRLRWRKGCLPVPQRVIRARVHGRQVYLVPRPDGVVVG 244 Query 248 ATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQRLDSR 307 ATQYEHGRDTAPVVSGVRDLLDDAC ++PALGEYELAEC AGLRPMTPDNLPLV+RLD R Sbjct 245 ATQYEHGRDTAPVVSGVRDLLDDACALVPALGEYELAECGAGLRPMTPDNLPLVRRLDER 304 Query 308 TLVAAGHGRSGFLLAPWTAEQIVSELVSVG 337 T VAAGHGR+GFLLAPWTAEQ+VSEL+ VG Sbjct 305 TYVAAGHGRNGFLLAPWTAEQVVSELLPVG 334 >gi|254818978|ref|ZP_05223979.1| glycine oxidase ThiO [Mycobacterium intracellulare ATCC 13950] Length=290 Score = 499 bits (1284), Expect = 4e-139, Method: Compositional matrix adjust. Identities = 255/289 (89%), Positives = 267/289 (93%), Gaps = 0/289 (0%) Query 50 MLAPHSEGWPGEERLLRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRT 109 MLAPHSEGWPGEERLLRLGL+SLRLWR+G FLDGL +VTA ESLVVAVDRAD ADLRT Sbjct 1 MLAPHSEGWPGEERLLRLGLESLRLWRDGGFLDGLPAGVVTARESLVVAVDRADAADLRT 60 Query 110 VADWLSAQGHPVIWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVR 169 VADWLSAQGHPV+WESAARDVEPLLAQGIRHGFRAPTELAVDNRA+LDAL +CERLGVR Sbjct 61 VADWLSAQGHPVVWESAARDVEPLLAQGIRHGFRAPTELAVDNRAVLDALEAECERLGVR 120 Query 170 WSSQVSSLSDVDAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRAR 229 W+ V LS V+A VVIANGIDAPALWPGLP+RPVKGEVLRLRWR GCMPLP+RVIRAR Sbjct 121 WAPPVHDLSAVEADAVVIANGIDAPALWPGLPVRPVKGEVLRLRWRKGCMPLPRRVIRAR 180 Query 230 VRGRQVYLVPRSDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAG 289 V GRQVYLVPR+DGVVVGATQYEHGRDTAPVVSGVRDLLDDAC VLPALGEYELAEC AG Sbjct 181 VHGRQVYLVPRADGVVVGATQYEHGRDTAPVVSGVRDLLDDACAVLPALGEYELAECGAG 240 Query 290 LRPMTPDNLPLVQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVGA 338 LRPMTPDNLPLV RLD+RTLVAAGHGRSGFLLAPWTAEQIVSEL VGA Sbjct 241 LRPMTPDNLPLVHRLDARTLVAAGHGRSGFLLAPWTAEQIVSELAPVGA 289 >gi|118470194|ref|YP_885196.1| glycine oxidase ThiO [Mycobacterium smegmatis str. MC2 155] gi|118171481|gb|ABK72377.1| glycine oxidase ThiO [Mycobacterium smegmatis str. MC2 155] Length=334 Score = 493 bits (1268), Expect = 2e-137, Method: Compositional matrix adjust. Identities = 264/333 (80%), Positives = 294/333 (89%), Gaps = 2/333 (0%) Query 7 TGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPGEERLLR 66 T ++AVIGGGVIGLSVARRAA GW VR+H + ERGASWVAGGMLAPHSEGWPGEE+LL+ Sbjct 2 TRTVAVIGGGVIGLSVARRAALDGWTVRLHCTTERGASWVAGGMLAPHSEGWPGEEQLLQ 61 Query 67 LGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHPVIWESA 126 LGL+SLRLW G FLDGL ++VTA ESLVVAVDRAD ADLRTVA+WL+AQGHPV + +A Sbjct 62 LGLESLRLWHSG-FLDGLPEKVVTARESLVVAVDRADAADLRTVAEWLAAQGHPVEFTTA 120 Query 127 ARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDVDAHTVV 186 ARDVEPLLAQGIRHGFRA TELAVDNR ++DAL CERL VRW+ QV L+DVDA VV Sbjct 121 ARDVEPLLAQGIRHGFRATTELAVDNRGVVDALAAHCERLAVRWAGQVDDLADVDADAVV 180 Query 187 IANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSDGVVV 246 IANGIDAP LWP LP+RPVKGEVLRLRWR GCMP+PQRVIRARV GRQVYLVPR+DGVVV Sbjct 181 IANGIDAPRLWPDLPVRPVKGEVLRLRWRKGCMPVPQRVIRARVHGRQVYLVPRADGVVV 240 Query 247 GATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQRLDS 306 GATQYEHGRDTAPVVSGVRDLL+DAC V+PALGEYELAE AGLRPMTPD LP+V+R+D Sbjct 241 GATQYEHGRDTAPVVSGVRDLLEDACAVMPALGEYELAEIAAGLRPMTPDGLPVVERVDE 300 Query 307 RTLVAAGHGRSGFLLAPWTAEQIVSEL-VSVGA 338 RT+VA GHGR+GFLLAPWTAE++ +EL V VGA Sbjct 301 RTVVAVGHGRNGFLLAPWTAERVAAELEVGVGA 333 >gi|108797525|ref|YP_637722.1| glycine oxidase ThiO [Mycobacterium sp. MCS] gi|119866611|ref|YP_936563.1| glycine oxidase ThiO [Mycobacterium sp. KMS] gi|126433147|ref|YP_001068838.1| glycine oxidase ThiO [Mycobacterium sp. JLS] gi|108767944|gb|ABG06666.1| glycine oxidase [Mycobacterium sp. MCS] gi|119692700|gb|ABL89773.1| glycine oxidase [Mycobacterium sp. KMS] gi|126232947|gb|ABN96347.1| glycine oxidase [Mycobacterium sp. JLS] Length=338 Score = 482 bits (1241), Expect = 3e-134, Method: Compositional matrix adjust. Identities = 253/332 (77%), Positives = 283/332 (86%), Gaps = 2/332 (0%) Query 9 SLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPGEERLLRLG 68 +LAVIGGGVIGLSVARRAA GW VRVHRS +GASWVAGGMLAPHSEGWPGE LLR+G Sbjct 6 TLAVIGGGVIGLSVARRAALDGWSVRVHRSPAKGASWVAGGMLAPHSEGWPGEHELLRIG 65 Query 69 LQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHPVIWESAAR 128 L SLRLW G FL+GL ++VTA ESLVVAVDRAD ADL+TV +WL+ QGHPV + +AAR Sbjct 66 LDSLRLW-HGGFLEGLPDEVVTARESLVVAVDRADAADLKTVGEWLAVQGHPVTFTTAAR 124 Query 129 DVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDVDAHTV-VI 187 D+EPLLAQGIRHGF A TELAVDNRA++DAL C RLGVRW+ V L+ VD + V+ Sbjct 125 DIEPLLAQGIRHGFVADTELAVDNRAVVDALEAHCTRLGVRWAPPVDDLAAVDDVDLRVL 184 Query 188 ANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSDGVVVG 247 ANG+DAP LWPGLPIRPVKGEVLRLRWR GCMP P+RV+RARV GRQVYLVPR+DGVVVG Sbjct 185 ANGVDAPTLWPGLPIRPVKGEVLRLRWRRGCMPAPRRVVRARVHGRQVYLVPRADGVVVG 244 Query 248 ATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQRLDSR 307 ATQYEHGRDTAP V+GVRDLLDDACTV+PALGEYE AEC AGLRPMTPD LPLV+ LD R Sbjct 245 ATQYEHGRDTAPAVTGVRDLLDDACTVMPALGEYEFAECAAGLRPMTPDGLPLVEWLDER 304 Query 308 TLVAAGHGRSGFLLAPWTAEQIVSELVSVGAA 339 TLVAAGHGR+GFLLAPWTAE++ +EL + A Sbjct 305 TLVAAGHGRNGFLLAPWTAERVSAELQTTQGA 336 >gi|315442245|ref|YP_004075124.1| glycine oxidase [Mycobacterium sp. Spyr1] gi|315260548|gb|ADT97289.1| glycine oxidase [Mycobacterium sp. Spyr1] Length=342 Score = 463 bits (1192), Expect = 2e-128, Method: Compositional matrix adjust. Identities = 256/330 (78%), Positives = 281/330 (86%), Gaps = 3/330 (0%) Query 6 HT-GSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPGEERL 64 HT G LAVIGGGVIGL+VARRAA GW RVHR+++ GASWVAGGMLAPHSEGWPGEE+L Sbjct 4 HTRGRLAVIGGGVIGLAVARRAALDGWATRVHRTEQPGASWVAGGMLAPHSEGWPGEEQL 63 Query 65 LRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHPVIWE 124 L LGL+SLRLW E FL L Q+VTA ESLVVAVD+AD ADLRTVA WL AQGHPV Sbjct 64 LTLGLESLRLWHE-QFLGSLPAQVVTARESLVVAVDQADAADLRTVAAWLCAQGHPVTPT 122 Query 125 SAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDV-DAH 183 ++ARD+EPLLAQGIRHGF A TELAVDNRA++ AL CERL VRW+ V SL++ DA Sbjct 123 TSARDMEPLLAQGIRHGFSADTELAVDNRAVVAALAEQCERLDVRWAPPVDSLAETADAD 182 Query 184 TVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSDG 243 VVIANGIDAPALWPGLP+RPVKGEVLRLRWR GC+P+P+RV+RARVRGRQVY+VPR DG Sbjct 183 AVVIANGIDAPALWPGLPVRPVKGEVLRLRWRRGCLPVPRRVVRARVRGRQVYVVPRPDG 242 Query 244 VVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQR 303 VVVGATQYEHGRDTAP V GVRDLLDDAC V+P LGEYE AE AGLRPMTPDNLPLV R Sbjct 243 VVVGATQYEHGRDTAPTVGGVRDLLDDACAVMPGLGEYEFAEAAAGLRPMTPDNLPLVGR 302 Query 304 LDSRTLVAAGHGRSGFLLAPWTAEQIVSEL 333 LD RTLVAAGHGRSGFLLAPWT E+I +EL Sbjct 303 LDERTLVAAGHGRSGFLLAPWTVEKIAAEL 332 >gi|145220802|ref|YP_001131480.1| glycine oxidase ThiO [Mycobacterium gilvum PYR-GCK] gi|145213288|gb|ABP42692.1| glycine oxidase [Mycobacterium gilvum PYR-GCK] Length=342 Score = 462 bits (1188), Expect = 4e-128, Method: Compositional matrix adjust. Identities = 256/330 (78%), Positives = 280/330 (85%), Gaps = 3/330 (0%) Query 6 HT-GSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPGEERL 64 HT G LAVIGGGVIGL+VARRAA GW RVHR++ GASWVAGGMLAPHSEGWPGEE+L Sbjct 4 HTRGRLAVIGGGVIGLAVARRAALDGWATRVHRTEHPGASWVAGGMLAPHSEGWPGEEQL 63 Query 65 LRLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHPVIWE 124 L LGL+SLRLW E FL L Q+VTA ESLVVAVD+AD ADLRTVA WL AQGHPV Sbjct 64 LTLGLESLRLWHE-QFLGSLPAQVVTARESLVVAVDQADAADLRTVAAWLCAQGHPVTPT 122 Query 125 SAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDV-DAH 183 ++ARD+EPLLAQGIRHGF A TELAVDNRA++ AL CERL VRW+ V SL++ DA Sbjct 123 TSARDMEPLLAQGIRHGFSADTELAVDNRAVVAALAEQCERLDVRWAPPVDSLAETADAD 182 Query 184 TVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSDG 243 VVIANGIDAPALWPGLP+RPVKGEVLRLRWR GC+P+P+RV+RARVRGRQVY+VPR DG Sbjct 183 AVVIANGIDAPALWPGLPVRPVKGEVLRLRWRRGCLPVPRRVVRARVRGRQVYVVPRPDG 242 Query 244 VVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQR 303 VVVGATQYEHGRDTAP V GVRDLLDDAC V+P LGEYE AE AGLRPMTPDNLPLV R Sbjct 243 VVVGATQYEHGRDTAPTVGGVRDLLDDACAVMPGLGEYEFAEAAAGLRPMTPDNLPLVGR 302 Query 304 LDSRTLVAAGHGRSGFLLAPWTAEQIVSEL 333 LD RTLVAAGHGRSGFLLAPWT E+I +EL Sbjct 303 LDERTLVAAGHGRSGFLLAPWTVEKIAAEL 332 >gi|169631296|ref|YP_001704945.1| thiamine biosynthesis oxidoreductase ThiO [Mycobacterium abscessus ATCC 19977] gi|169243263|emb|CAM64291.1| Possible thiamine biosynthesis oxidoreductase ThiO [Mycobacterium abscessus] Length=353 Score = 419 bits (1078), Expect = 2e-115, Method: Compositional matrix adjust. Identities = 217/324 (67%), Positives = 250/324 (78%), Gaps = 2/324 (0%) Query 6 HTGSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERGASWVAGGMLAPHSEGWPGEERLL 65 GS+AVIGGGVIGLSVAR AA+ GW V +H +G SWVAGGMLAP+SE WPGE+ LL Sbjct 5 QKGSVAVIGGGVIGLSVAREAARTGWRVVIHDDGAKGPSWVAGGMLAPYSEAWPGEDELL 64 Query 66 RLGLQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHPVIWES 125 LG++SL +WR+G F+D + ++TA SL VAVD ADV +LRT+ WL+A+GHPV + Sbjct 65 ELGIESLGIWRDG-FIDDVENPVITARGSLTVAVDTADVGELRTMTGWLAARGHPVTEIA 123 Query 126 AARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDVDAHTV 185 ARDVEP+LAQ +R GF AP EL+VDNR +L AL +CE LGV DVDA V Sbjct 124 NARDVEPMLAQNVRRGFTAPEELSVDNRKVLQALTAECEALGVGRGPAAVHTRDVDADQV 183 Query 186 VIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSDGVV 245 VIANG+ A AL GLP+RPVKGEVLRLR RPG MP P VIRARV GR VYLVPR+DGVV Sbjct 184 VIANGVQAAAL-AGLPVRPVKGEVLRLRQRPGAMPPPANVIRARVHGRHVYLVPRADGVV 242 Query 246 VGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQRLD 305 VGATQYEHG DTAP V+GVRDLLDDAC +LP LGEYE AEC AGLRPMT DNLP+V R+D Sbjct 243 VGATQYEHGHDTAPAVAGVRDLLDDACALLPCLGEYEFAECAAGLRPMTDDNLPMVGRID 302 Query 306 SRTLVAAGHGRSGFLLAPWTAEQI 329 R +VAAGHGRSGFLLAPWTA+ I Sbjct 303 ERVVVAAGHGRSGFLLAPWTAKTI 326 >gi|226304969|ref|YP_002764927.1| thiamine biosynthesis oxidoreductase ThiO [Rhodococcus erythropolis PR4] gi|226184084|dbj|BAH32188.1| putative thiamine biosynthesis oxidoreductase ThiO [Rhodococcus erythropolis PR4] Length=359 Score = 332 bits (852), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 177/319 (56%), Positives = 223/319 (70%), Gaps = 5/319 (1%) Query 20 LSVARRAAQAGWPVRVHR-SDERGASWVAGGMLAPHSEGWPGEERLLRLGLQSLRLWRE- 77 L++A RAA+ GW VR+H S GASWVAGGMLAP SEGWPGEE L +G SL W Sbjct 18 LAIAWRAARDGWSVRLHDPSIGSGASWVAGGMLAPLSEGWPGEETALTVGAASLERWPTF 77 Query 78 GSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP--VIWESAARDVEPLLA 135 G L GP + TA SL VA+D AD DL+T+A+W++AQGH V+ + R++EP+L Sbjct 78 GEELGKFGPSVFTADSSLTVALDAADAQDLQTIAEWVTAQGHELEVLGRARIRELEPMLG 137 Query 136 QGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQ-VSSLSDVDAHTVVIANGIDAP 194 +GIR G A E AVDNR LL+AL + C GV ++ V+ L+++D +V+ GI +P Sbjct 138 RGIRSGLMAVGESAVDNRLLLEALQKACAESGVELIARAVNDLAELDTDQIVLTAGIASP 197 Query 195 ALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSDGVVVGATQYEHG 254 LWPGLP+RPVKGE+LRLR RPG P P R IR V GR YLVPR DG+VVGATQYE G Sbjct 198 KLWPGLPVRPVKGEILRLRSRPGVTPAPSRTIRGSVHGRPAYLVPRGDGIVVGATQYESG 257 Query 255 RDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQRLDSRTLVAAGH 314 DT ++GVRDL++DA ++PA+GEYEL EC AGLRPMTPDNLPL+ R+ R +V+ GH Sbjct 258 EDTQVTMAGVRDLINDAEALMPAIGEYELYECAAGLRPMTPDNLPLIGRVSDRVVVSTGH 317 Query 315 GRSGFLLAPWTAEQIVSEL 333 GR+G LL P TA+ V+ L Sbjct 318 GRNGVLLTPVTADATVALL 336 >gi|229492977|ref|ZP_04386772.1| glycine oxidase ThiO [Rhodococcus erythropolis SK121] gi|229320007|gb|EEN85833.1| glycine oxidase ThiO [Rhodococcus erythropolis SK121] Length=359 Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 175/319 (55%), Positives = 220/319 (69%), Gaps = 5/319 (1%) Query 20 LSVARRAAQAGWPVRVHR-SDERGASWVAGGMLAPHSEGWPGEERLLRLGLQSLRLWRE- 77 L++A RAA+ GW VR++ S GASWVAGGMLAP SEGWPGEE L +G SL W Sbjct 18 LAIAWRAARDGWAVRLYDPSIGSGASWVAGGMLAPLSEGWPGEETALTIGAASLERWPTF 77 Query 78 GSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP--VIWESAARDVEPLLA 135 G L G + TA SL VA+D AD DL+T+A+W+S+QGH V+ + R++EP+L Sbjct 78 GEELGKFGQSVFTADSSLTVALDAADAQDLQTIAEWVSSQGHELEVLGRARIRELEPMLG 137 Query 136 QGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQ-VSSLSDVDAHTVVIANGIDAP 194 +GIR G A E AVDNR LL AL + C GV ++ V L+++D +V+ GI +P Sbjct 138 RGIRSGLMAVGESAVDNRLLLAALQKACAESGVELIARAVDDLAELDTDQIVLTAGIASP 197 Query 195 ALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSDGVVVGATQYEHG 254 LWPGLP+RPVKGE+LRLR RPG P P R IR V GR YLVPR DG+VVGATQYE G Sbjct 198 KLWPGLPVRPVKGEILRLRSRPGVTPAPSRTIRGSVHGRPAYLVPRGDGIVVGATQYESG 257 Query 255 RDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQRLDSRTLVAAGH 314 DT ++GVRDL++DA ++PA+GEYEL EC AGLRPMTPDNLPL+ R+ R +V+ GH Sbjct 258 EDTQVTMAGVRDLINDAEALMPAIGEYELYECAAGLRPMTPDNLPLIGRVSDRVVVSTGH 317 Query 315 GRSGFLLAPWTAEQIVSEL 333 GR+G LL P TA+ V+ L Sbjct 318 GRNGVLLTPVTADATVALL 336 >gi|111019183|ref|YP_702155.1| D-amino acid dehydrogenase [Rhodococcus jostii RHA1] gi|110818713|gb|ABG93997.1| probable D-amino acid dehydrogenase [Rhodococcus jostii RHA1] Length=365 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 180/320 (57%), Positives = 218/320 (69%), Gaps = 6/320 (1%) Query 20 LSVARRAAQAGWPVRVHR-SDERGASWVAGGMLAPHSEGWPGEERLLRLGLQSLRLWRE- 77 LS+A RAA+ GW VR++ S GASWVAGGMLAP SEGWPGEE +L LG SL W E Sbjct 25 LSIAWRAARNGWSVRLYDPSIGSGASWVAGGMLAPLSEGWPGEESVLELGSASLDRWPEF 84 Query 78 GSFLD-GLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP--VIWESAARDVEPLL 134 G L+ G G +L T+ SL VA+D AD DLRT+A+W+ AQG ++ R +EP+L Sbjct 85 GKELEAGAGVELFTSQSSLTVALDGADAEDLRTIAEWVGAQGRELQILSRVEVRALEPML 144 Query 135 AQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQ-VSSLSDVDAHTVVIANGIDA 193 +G+R G A ELAVDNR LL AL R GV + V SL + +V+ GI + Sbjct 145 GRGVRLGLLAVDELAVDNRLLLQALQRCAVDAGVELIGEAVHSLDRLGTDQIVVTAGIAS 204 Query 194 PALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSDGVVVGATQYEH 253 PALWPGLP+RPVKGE+LRLR RPG P P R IR V GR YLVPR+DG+VVGATQYE Sbjct 205 PALWPGLPVRPVKGEILRLRSRPGVTPAPGRTIRGSVHGRPAYLVPRADGIVVGATQYES 264 Query 254 GRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQRLDSRTLVAAG 313 G DT V+GVRDL+ DA ++PA+GEYEL E AGLRPMTPDNLPL+ R+ R +VA G Sbjct 265 GNDTQVTVAGVRDLIADAEALMPAIGEYELRETSAGLRPMTPDNLPLIGRVSDRVVVATG 324 Query 314 HGRSGFLLAPWTAEQIVSEL 333 HGR+G LL P TA+ V+ L Sbjct 325 HGRNGILLTPVTADATVALL 344 >gi|226361319|ref|YP_002779097.1| thiamine biosynthesis oxidoreductase ThiO [Rhodococcus opacus B4] gi|226239804|dbj|BAH50152.1| putative thiamine biosynthesis oxidoreductase ThiO [Rhodococcus opacus B4] Length=365 Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 178/320 (56%), Positives = 217/320 (68%), Gaps = 6/320 (1%) Query 20 LSVARRAAQAGWPVRVHR-SDERGASWVAGGMLAPHSEGWPGEERLLRLGLQSLRLWRE- 77 LS+A RAA+ GW V+++ S GASWVAGGMLAP SEGWPGEE +L LG SL W E Sbjct 25 LSIAWRAARNGWSVKLYDPSIGSGASWVAGGMLAPLSEGWPGEESVLELGSASLDRWPEF 84 Query 78 GSFLD-GLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGH--PVIWESAARDVEPLL 134 G L+ G G L T+ SL VA+D AD DLRT+A+W+ AQG ++ + R +EP+L Sbjct 85 GKELEAGAGVDLFTSESSLTVALDGADAEDLRTIAEWVGAQGRDLQILNRAEVRALEPML 144 Query 135 AQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQ-VSSLSDVDAHTVVIANGIDA 193 +G+R G A ELAVDNR LL AL R GV + V SL + +V+ GI + Sbjct 145 GRGVRLGLLAVDELAVDNRLLLQALQRCAVDAGVELIGEAVRSLDGLGTDQIVVTAGIAS 204 Query 194 PALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSDGVVVGATQYEH 253 PALW GLP+RPVKGE+LRLR RPG P P R IR V GR YLVPR+DG+VVGATQYE Sbjct 205 PALWAGLPVRPVKGEILRLRARPGVTPAPGRTIRGSVHGRPAYLVPRADGIVVGATQYES 264 Query 254 GRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQRLDSRTLVAAG 313 G DT V+GVRDL+ DA ++PA+GEYEL E AGLRPMTPDNLPL+ R+ R +VA G Sbjct 265 GNDTQVTVAGVRDLIADAEALMPAIGEYELRETAAGLRPMTPDNLPLIGRVSDRVVVATG 324 Query 314 HGRSGFLLAPWTAEQIVSEL 333 HGR+G LL P TA+ V+ L Sbjct 325 HGRNGILLTPVTADATVALL 344 >gi|325673937|ref|ZP_08153627.1| glycine oxidase ThiO [Rhodococcus equi ATCC 33707] gi|325555202|gb|EGD24874.1| glycine oxidase ThiO [Rhodococcus equi ATCC 33707] Length=344 Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 176/323 (55%), Positives = 225/323 (70%), Gaps = 6/323 (1%) Query 17 VIGLSVARRAAQAGWPVRVHR-SDERGASWVAGGMLAPHSEGWPGEERLLRLGLQSLRLW 75 +IGLS+A RAAQ+GW V ++ + GASWVAGGMLAP SEGWPGEE+ L LG SLR W Sbjct 1 MIGLSIAWRAAQSGWAVTLYDPAPGSGASWVAGGMLAPLSEGWPGEEKALALGAASLRRW 60 Query 76 RE-GSFLDGLGP-QLVTAHESLVVAVDRADVADLRTVADWLSAQGHP--VIWESAARDVE 131 + G+ L L +L T+ +SL VA+D AD ADL TVADW++ QGH ++ + R++E Sbjct 61 PDFGAELGRLADVELFTSDDSLTVALDAADAADLHTVADWVAEQGHELRILNRAQIRELE 120 Query 132 PLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQ-VSSLSDVDAHTVVIANG 190 P L +GIR +APTELAVDNR L+ AL GV Q V+ L ++ VV+A G Sbjct 121 PSLGRGIRLALQAPTELAVDNRLLVAALRTAVAEAGVELIEQAVTDLGELTTDQVVLAAG 180 Query 191 IDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSDGVVVGATQ 250 ++ LWP LP+RPVKGE+LRLR RPG P P R IR V GR YLVPR+DG+VVGATQ Sbjct 181 SNSAQLWPHLPVRPVKGEILRLRARPGVTPTPLRTIRGSVHGRPSYLVPRADGIVVGATQ 240 Query 251 YEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQRLDSRTLV 310 YE G DT V+GVRDL+ DA ++PA+GEYEL E +AGLRPM+PDNLP++ R+ R ++ Sbjct 241 YESGHDTQVTVAGVRDLIADAEALMPAIGEYELYEAKAGLRPMSPDNLPIIGRVSDRVVL 300 Query 311 AAGHGRSGFLLAPWTAEQIVSEL 333 A GHGR+G L+ P TA+ V+ L Sbjct 301 ATGHGRNGILMTPVTADATVAIL 323 >gi|312141233|ref|YP_004008569.1| d-amino acid oxidase [Rhodococcus equi 103S] gi|311890572|emb|CBH49890.1| putative secreted D-amino acid oxidase [Rhodococcus equi 103S] Length=355 Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 173/320 (55%), Positives = 222/320 (70%), Gaps = 6/320 (1%) Query 20 LSVARRAAQAGWPVRVHR-SDERGASWVAGGMLAPHSEGWPGEERLLRLGLQSLRLWRE- 77 LS+A RAAQ+GW V ++ + GASWVAGGMLAP SEGWPGEE+ L LG SLR W + Sbjct 15 LSIAWRAAQSGWAVTLYDPAPGSGASWVAGGMLAPLSEGWPGEEKALALGAASLRRWPDF 74 Query 78 GSFLDGLGP-QLVTAHESLVVAVDRADVADLRTVADWLSAQGHP--VIWESAARDVEPLL 134 G+ L L +L T+ +SL VA+D AD ADL T+ADW++ QGH ++ + R++EP L Sbjct 75 GAELGRLADVELFTSDDSLTVALDAADAADLHTIADWVAEQGHELRILNRAQIRELEPSL 134 Query 135 AQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQ-VSSLSDVDAHTVVIANGIDA 193 +GIR +APTELAVDNR L+ AL GV Q V+ L ++ VV+A G ++ Sbjct 135 GRGIRLALQAPTELAVDNRLLVAALRTAVAEAGVELIEQAVTDLGELTTDQVVLAAGSNS 194 Query 194 PALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSDGVVVGATQYEH 253 LWP LP+RPVKGE+LRLR RPG P P R IR V GR YLVPR+DG+VVGATQYE Sbjct 195 AQLWPHLPVRPVKGEILRLRARPGVTPAPLRTIRGSVHGRPSYLVPRADGIVVGATQYES 254 Query 254 GRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQRLDSRTLVAAG 313 G DT V+GVRDL+ DA ++PA+GEYEL E +AGLRPM+PDNLP++ R+ R ++A G Sbjct 255 GHDTQVTVAGVRDLIADAEALMPAIGEYELYEAKAGLRPMSPDNLPIIGRVSDRVVLATG 314 Query 314 HGRSGFLLAPWTAEQIVSEL 333 HGR+G L+ P TA+ V+ L Sbjct 315 HGRNGILMTPVTADATVAIL 334 >gi|54027313|ref|YP_121555.1| putative amino acid oxidase [Nocardia farcinica IFM 10152] gi|54018821|dbj|BAD60191.1| putative amino acid oxidase [Nocardia farcinica IFM 10152] Length=367 Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 174/331 (53%), Positives = 216/331 (66%), Gaps = 7/331 (2%) Query 9 SLAVIGGGVIGLSVARRAAQAGWPVRVHRSDE-RGASWVAGGMLAPHSEGWPGEERLLRL 67 +LAV+GGG IG +VA RAA+AGW V + + GAS VAGGMLAP SEGWPGE+R+L Sbjct 6 TLAVVGGGAIGFAVAWRAAEAGWRVTLFDAAAGSGASRVAGGMLAPLSEGWPGEDRVLEF 65 Query 68 GLQSLRLWRE--GSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP--VIW 123 G SL W + G + A +L VA+D AD ADLRTVADW+ +GH V+ Sbjct 66 GAASLARWPDFAARLRSATGIDVFVAEATLTVALDAADAADLRTVADWVGERGHDLRVLD 125 Query 124 ESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQ-VSSLSDVDA 182 + R +EP LA+ +R G + E A+DNR L AL GV ++ V+ L+ + Sbjct 126 RAGVRAIEPALARTVRAGMLS-AEPAIDNRQLFRALHAAATAAGVDVRAESVTDLTALSF 184 Query 183 HTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSD 242 VV+A G + LWPGLP+RPVKGE+LRLR RPG P P+RV+RARV GR VYLVPR+D Sbjct 185 DQVVLAAGAASAGLWPGLPVRPVKGEILRLRHRPGAAPAPRRVVRARVHGRPVYLVPRAD 244 Query 243 GVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQ 302 G+VVGATQYE G DT V GVRDL+ DA VLP +GEYELAE AG RP TPDNLPL+ Sbjct 245 GIVVGATQYEAGFDTTVTVGGVRDLIADAEAVLPGIGEYELAEASAGSRPGTPDNLPLIG 304 Query 303 RLDSRTLVAAGHGRSGFLLAPWTAEQIVSEL 333 RL R + A GHGR+G L P T + ++ L Sbjct 305 RLSERVVAATGHGRNGMLAVPLTVDATMAAL 335 >gi|333918212|ref|YP_004491793.1| glycine oxidase ThiO [Amycolicicoccus subflavus DQS3-9A1] gi|333480432|gb|AEF38992.1| Glycine oxidase ThiO [Amycolicicoccus subflavus DQS3-9A1] Length=305 Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 151/288 (53%), Positives = 184/288 (64%), Gaps = 4/288 (1%) Query 50 MLAPHSEGWPGEERLLRLGLQSLRLWRE-GSFLDGLGPQLVTAHESLVVAVDRADVADLR 108 MLAP SEGWPGEERLL LGL SL W + + LD +VT+ ++ VAVD AD DL Sbjct 1 MLAPLSEGWPGEERLLELGLASLARWDDFAAELDAFAAGIVTSRSTVTVAVDEADARDLS 60 Query 109 TVADWLSAQGHPV--IWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERL 166 + DWL+ QGHPV + + RD EP L + +R GF A E AVDNR LL AL C Sbjct 61 RIRDWLADQGHPVGALSRAELRDAEPELTRALRPGFSADAERAVDNRRLLKALTAACHAS 120 Query 167 GV-RWSSQVSSLSDVDAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRV 225 GV R + +V+ + + VV+A G L G P+RPVKGEVLRL R G P R Sbjct 121 GVQRIAERVTDIDVLPHEQVVVAAGAWTGKLVKGAPVRPVKGEVLRLHRRNGAPAPPTRT 180 Query 226 IRARVRGRQVYLVPRSDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAE 285 +RA V GR VYLVPR+ G+V+GATQYE G +T GVRDLL DA + P + EY AE Sbjct 181 VRAWVHGRHVYLVPRAHGLVIGATQYEAGFETQVTAGGVRDLLADAEAIFPGISEYGFAE 240 Query 286 CEAGLRPMTPDNLPLVQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSEL 333 C AGLRP TPDN+PL+ R+D R +AAGHGR G LLAP TA+ +V+EL Sbjct 241 CIAGLRPATPDNMPLLGRIDERVTLAAGHGRGGILLAPLTADAVVAEL 288 >gi|262204215|ref|YP_003275423.1| glycine oxidase ThiO [Gordonia bronchialis DSM 43247] gi|262087562|gb|ACY23530.1| glycine oxidase ThiO [Gordonia bronchialis DSM 43247] Length=361 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 165/338 (49%), Positives = 212/338 (63%), Gaps = 15/338 (4%) Query 8 GSLAVIGGGVIGLSVARRAAQAGWPVRVHRSD--ERGASWVAGGMLAPHSEGWPGEERLL 65 G+LAVIGGGVIGL+ A AA AGW VRV + ER AS VAGGML EG PGE+RLL Sbjct 9 GTLAVIGGGVIGLTCALAAADAGWRVRVFDAGPAER-ASQVAGGMLGSLGEGHPGEDRLL 67 Query 66 RLGLQSLRLWREGSFLDGLG-PQLVTAHESLVVAVDRADVADLRTVADWLSAQ---GHPV 121 L + S++ W + +D LG P +VTA +SL VA AD L +A ++ AQ Sbjct 68 ALSVDSVKRWP--ALVDRLGDPSIVTATDSLFVASTAADAERLDHLARFVWAQQPSAGAT 125 Query 122 IWESAARDV---EPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRW-SSQVSSL 177 + +ARD+ EP+L + G+RA E A+DNR LL L R LGV + ++V++ Sbjct 126 LNHVSARDIRAMEPMLGTRLVGGYRAEGEWALDNRRLLTQLRRAGGELGVEYLDTRVATR 185 Query 178 SDVDAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYL 237 +++ VV+A G+ ALWP + KGEVLRL +P P+ V+RA V GR VYL Sbjct 186 AELPDDQVVLAAGLGTNALWPAADLYGAKGEVLRLHRTRWSVPPPRHVVRAVVGGRNVYL 245 Query 238 VPRSDGVVVGATQYE--HGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTP 295 VPR+DG+VVGATQYE G T P V GV DLL DA V+P L YEL E AGLRP TP Sbjct 246 VPRADGIVVGATQYEPQSGNGTVPEVGGVADLLADAIEVMPGLRTYELVEAGAGLRPCTP 305 Query 296 DNLPLVQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSEL 333 D LP++ R+D RT++A GHGR+G +LAP TA+ +V L Sbjct 306 DALPIISRVDDRTVIATGHGRNGIVLAPVTADAVVRLL 343 >gi|296141422|ref|YP_003648665.1| glycine oxidase ThiO [Tsukamurella paurometabola DSM 20162] gi|296029556|gb|ADG80326.1| glycine oxidase ThiO [Tsukamurella paurometabola DSM 20162] Length=342 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 160/334 (48%), Positives = 207/334 (62%), Gaps = 9/334 (2%) Query 9 SLAVIGGGVIGLSVARRAAQAGWPVRVHRSDE-RGASWVAGGMLAPHSEGWPGEERLLRL 67 +++V+G G++GL+VA A+AG V V+ + GASWVAGGMLAP+SE WPGEERLL L Sbjct 4 NVSVVGAGIVGLTVAWSLARAGAAVTVYDPEPGSGASWVAGGMLAPYSEAWPGEERLLAL 63 Query 68 GLQSLRLWREGSFLDGLGP----QLVTAHESLVVAVDRADVADLRTVADWLSAQG-HPVI 122 G +SL LW + F L P L+TA ++ +A D D ADL T+A + + I Sbjct 64 GAESLALWDD--FAAALQPYADGTLITARGTVWLATDDGDAADLATIAAAVGDEDVFEAI 121 Query 123 WESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQ-VSSLSDVD 181 SAA P A IR +AP+ELAVDNR + AL GV ++ V++ S + Sbjct 122 RPSAAIRAIPGAAPRIRAAAQAPSELAVDNRLVHRALLTVGAAAGVTVRTETVNAPSQLP 181 Query 182 AHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRS 241 V++ G + L P +R VKGEV+RLR P C+P P +RARV GR Y+VPR+ Sbjct 182 GDAVIVCAGAASADLLPDCGVRSVKGEVVRLRRGPTCLPPPTVTVRARVHGRPAYVVPRA 241 Query 242 DGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLV 301 DGVVVGATQYE+ RD AP V V DLL+DA +VLP L EYEL E AGLRP PDNLPL+ Sbjct 242 DGVVVGATQYENDRDLAPRVGPVVDLLEDAFSVLPFLREYELIEVTAGLRPTRPDNLPLI 301 Query 302 QRLDSRTLVAAGHGRSGFLLAPWTAEQIVSELVS 335 +D R A GHGR+G LLAP T + V +++ Sbjct 302 GPVDGRVFAATGHGRNGILLAPITGARAVDMVLN 335 >gi|256374561|ref|YP_003098221.1| glycine oxidase ThiO [Actinosynnema mirum DSM 43827] gi|255918864|gb|ACU34375.1| glycine oxidase ThiO [Actinosynnema mirum DSM 43827] Length=335 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 165/331 (50%), Positives = 200/331 (61%), Gaps = 12/331 (3%) Query 10 LAVIGGGVIGLSVARRAAQAGWPVRVH-RSDERGASWVAGGMLAPHSEGWPGEERLLRLG 68 + V+GGGVIGLS+A RAAQAG+ V V R SWVAGGMLAP SE WPG+E +L LG Sbjct 6 VTVLGGGVIGLSIAWRAAQAGFAVAVRDRGSAHAGSWVAGGMLAPVSEAWPGDEAVLALG 65 Query 69 LQSLRLWREGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQG--HPVIWESA 126 L+S+RLW F LG +L TA +L+ AVD AD A L A L+A G V+ + Sbjct 66 LESIRLWP--GFARELGVRLNTAG-TLLTAVDAADAAVLDQHAAHLAAHGLEFQVLGAAG 122 Query 127 ARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDVDAHTVV 186 R+ EP L +R G P +LAV R LL AL C GVR++ ++ S+VD T V Sbjct 123 LREREPGLGPSVRSGLSIPGDLAVSARTLLAALRTACAEAGVRFTG--AAESEVDGSTTV 180 Query 187 IANGIDAPALWPGL--PIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRS--D 242 IA G + L P L I PVKGE+L L RPG + P+R IRA+VRGR VYLVP Sbjct 181 IAAGAWSAELHPALRDVIHPVKGEILSLLARPGALEAPERTIRAQVRGRAVYLVPNETRS 240 Query 243 GVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQ 302 G++VGATQYE G D V GV DLL DA V PAL EY LAE G R + DN PL+ Sbjct 241 GLLVGATQYEAGFDPTVRVRGVLDLLTDAEEVWPALTEYALAETSVGFRAGSRDNTPLID 300 Query 303 RLDSRTLVAAGHGRSGFLLAPWTAEQIVSEL 333 L+ L A GH R+G LLAP TA ++V L Sbjct 301 WLEPGVLAATGHHRNGVLLAPVTARRVVELL 331 >gi|343924498|ref|ZP_08764047.1| thiamine biosynthesis oxidoreductase ThiO [Gordonia alkanivorans NBRC 16433] gi|343765642|dbj|GAA10973.1| thiamine biosynthesis oxidoreductase ThiO [Gordonia alkanivorans NBRC 16433] Length=354 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 160/343 (47%), Positives = 208/343 (61%), Gaps = 22/343 (6%) Query 9 SLAVIGGGVIGLSVARRAAQAGWPVRVHRS--DERGASWVAGGMLAPHSEGWPGEERLLR 66 +L V+GGGVIGL+ A AA AGW V V + DER ASWVAGGML EG PGEE L Sbjct 11 ALTVVGGGVIGLTCALAAADAGWQVFVVDAGHDER-ASWVAGGMLGSLGEGHPGEEAALA 69 Query 67 LGLQSLRLWREGSFLDGLG-PQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP----- 120 L ++S+R W + + L P +VTA +SL VA AD LR +AD++ A P Sbjct 70 LSVESVRRWP--TLVKRLDDPAIVTATDSLFVAGSAADAEYLRHLADFVWAN-QPRTDAT 126 Query 121 --VIWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRW-SSQVSSL 177 + R +EP L+ + G+RA E ++DNR LL L +GVR+ ++V SL Sbjct 127 LSTVTGREIRSLEPSLSSRLVGGYRAVGEWSIDNRRLLATLRSAGAAVGVRFMDARVESL 186 Query 178 SDVDAHT-----VVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRG 232 +DV +++A G+ AL P +P+ KGE+LRLR +P P V+RAR+ G Sbjct 187 ADVREQAGPRDQILLAAGLATAALLPEVPLHAAKGEILRLRRTRWSVPPPGHVVRARLHG 246 Query 233 RQVYLVPRSDGVVVGATQYEHGR--DTAPVVSGVRDLLDDACTVLPALGEYELAECEAGL 290 R VYLVPR DG+VVGATQYE G D P GV DLL DA V+P L YEL E AGL Sbjct 247 RAVYLVPREDGIVVGATQYEAGDFGDRTPQAGGVADLLADAIEVMPGLRTYELTEAGAGL 306 Query 291 RPMTPDNLPLVQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSEL 333 RP T D LP+V+R+D RT+VA GHGR+G +LAP TA++++ L Sbjct 307 RPCTADGLPIVERIDDRTVVATGHGRNGIVLAPGTADRVLGIL 349 >gi|300790384|ref|YP_003770675.1| glycine oxidase [Amycolatopsis mediterranei U32] gi|299799898|gb|ADJ50273.1| glycine oxidase [Amycolatopsis mediterranei U32] gi|340532068|gb|AEK47273.1| glycine oxidase [Amycolatopsis mediterranei S699] Length=357 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 155/335 (47%), Positives = 199/335 (60%), Gaps = 17/335 (5%) Query 9 SLAVIGGGVIGLSVARRAAQAGWPVRVHRSD--ERGASWVAGGMLAPHSEGWPGEERLLR 66 +LAV+GGGVIGLS A RAA V ++ + GASW+AGGMLAP +E WPGEE +LR Sbjct 3 NLAVVGGGVIGLSAAWRAAAKKHDVTLYDPEPARGGASWLAGGMLAPVTEAWPGEEDILR 62 Query 67 LGLQSLRLWREGSFLDGLGPQLVT----AHESLVVAVDRADVADLRTVADWLSAQGHPV- 121 LG +SL+ W F L + VT H +LVVA DRAD L +A L + G Sbjct 63 LGEESLKRWP--GFARDLEKEGVTPGLAEHGTLVVAFDRADAGYLDILAGHLHSLGRTAE 120 Query 122 -IWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRW-SSQVSSLSD 179 + + +EP + +R G P +LAVDNR LLDAL C VR+ +V L D Sbjct 121 RLTGREVKRLEPGVGS-VRSGLHVPGDLAVDNRKLLDALYAACVNHRVRFVRERVEELPD 179 Query 180 VDAHTVVIANGIDAPALWPGLP--IRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYL 237 +A VV+A G L P L +RP+KGE+LRL+ R GC+P P +RA V GR +YL Sbjct 180 AEA--VVLAAGAWTGQLHPLLAGAVRPLKGEILRLKPRRGCLPPPTHTVRAVVEGRPIYL 237 Query 238 VPRSDG-VVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPD 296 VPR D +V+GATQYE G D A V GVR+LL+ A + PA+ EYEL E AGLR + D Sbjct 238 VPRGDQELVLGATQYEAGFDRAVTVRGVRELLEGAERIYPAVTEYELVESAAGLRAGSRD 297 Query 297 NLPLVQRLDSRTLVAAGHGRSGFLLAPWTAEQIVS 331 LP + LD A GH R+G L+AP TA+ +V+ Sbjct 298 ALPYLGVLDGSVFAATGHHRNGLLMAPVTADAVVA 332 >gi|326384630|ref|ZP_08206308.1| glycine oxidase ThiO [Gordonia neofelifaecis NRRL B-59395] gi|326196597|gb|EGD53793.1| glycine oxidase ThiO [Gordonia neofelifaecis NRRL B-59395] Length=369 Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 149/337 (45%), Positives = 201/337 (60%), Gaps = 13/337 (3%) Query 8 GSLAVIGGGVIGLSVARRAAQAGWPVRVHRSDERG-ASWVAGGMLAPHSEGWPGEERLLR 66 G L+VIGGGV+GL+ A AA +GW VR+ + A+ VAGGML +EG PGE+RLL Sbjct 15 GDLSVIGGGVVGLTCALAAADSGWRVRIFDAGPGARAADVAGGMLGCLAEGHPGEDRLLA 74 Query 67 LGLQSLRLWREGSFLDGLG-PQLVTAHESLVVAVDRADVADLRTVADWLSAQGHPV---- 121 + S+ W + L LG P + TA +SL++ ADV L + +L+ Sbjct 75 VARDSVARWP--ALLARLGDPSVETAADSLLIGAAPADVDHLASQVRFLTGHAPDAAERL 132 Query 122 --IWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLG-VRWSSQVSSLS 178 + + R EP L +GI GFRA E ++DNR L+ AL R + G +R + V+ L Sbjct 133 QPMSGAELRAAEPALVRGIAGGFRAIGEGSIDNRRLIAALERALDACGAIREQATVTDLR 192 Query 179 DVDAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLV 238 V +++A G+ L PG+ +R KGE+LRLR +P P VIRAR GR +YLV Sbjct 193 AVPGDQILVAAGLGTRRLVPGIDLRGEKGEILRLRRTRWSVPPPTEVIRARWHGRPLYLV 252 Query 239 PRSDGVVVGATQYE--HGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPD 296 PR DG+V+GATQYE D P+ GV DLL DA ++P L YEL E AG+RP +PD Sbjct 253 PREDGIVLGATQYEAYDDADRVPLAGGVGDLLSDAGELMPGLRSYELVEAGAGIRPSSPD 312 Query 297 NLPLVQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSEL 333 +P+V+R D+R +VAAGHGR+G LAPWTA Q+V L Sbjct 313 GVPVVRREDARVVVAAGHGRNGIALAPWTAAQVVDLL 349 >gi|134097117|ref|YP_001102778.1| amino acid oxidase flavoprotein ThiO, putative [Saccharopolyspora erythraea NRRL 2338] gi|291009667|ref|ZP_06567640.1| amino acid oxidase flavoprotein ThiO, putative [Saccharopolyspora erythraea NRRL 2338] gi|133909740|emb|CAL99852.1| amino acid oxidase flavoprotein ThiO, putative [Saccharopolyspora erythraea NRRL 2338] Length=376 Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 160/337 (48%), Positives = 188/337 (56%), Gaps = 23/337 (6%) Query 18 IGLSVARRAAQAGWPVRV-HRSDERGASWVAGGMLAPHSEGWPGEERLLRLGLQSLRLWR 76 IGLSVA AA+AG V V + GAS VAGGMLAP +E WPGEE LL LG SL W Sbjct 14 IGLSVAWCAARAGHRVTVVDPAPASGASHVAGGMLAPVAEAWPGEEELLELGAASLHRWP 73 Query 77 EGSFLDGLG-----PQLVTAHESLVVAVDRADVADLRTVADWLSAQGHPVIWESA--ARD 129 + F D L P + +LVV VD AD +L +AD+L+ G V + R Sbjct 74 D--FADRLARDAGMPSGLRPEGTLVVGVDSADRTELDNLADYLARLGRSVTRHNGRELRR 131 Query 130 VEPLLAQGIRHGFRAPTELAVDNRALLDALCR----------DCERLGVRWSSQVSSLSD 179 +EP L +R G P +LAVDNR L AL VR S Sbjct 132 MEPSLGPSVRAGLSVPGDLAVDNRVALAALRAAATAAGAEFVTARARAVRAGEVELEDSA 191 Query 180 VDAHTVVIANGIDAPALWPGLP--IRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYL 237 + VIA G + L P L IRPVKGE+LRLR R +P P R +R V GRQVYL Sbjct 192 LRCDVAVIAAGARSGDLHPLLSGAIRPVKGEILRLRARTTALPPPTRTVRGPVHGRQVYL 251 Query 238 VPRSDG-VVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPD 296 VPR DG +VVGATQYE G DT V GVRDL+ DA VLP + EY L E AGLRP T D Sbjct 252 VPRDDGGLVVGATQYEVGFDTEVTVGGVRDLIADAEQVLPGIAEYALVEAIAGLRPGTGD 311 Query 297 NLPLVQRLDSRTLVAAGHGRSGFLLAPWTAEQIVSEL 333 NLPL+ L+ + A GH R+GFLLAP TAE +V+ L Sbjct 312 NLPLLGWLEPGVIAATGHHRNGFLLAPVTAEAVVALL 348 >gi|331699485|ref|YP_004335724.1| glycine oxidase ThiO [Pseudonocardia dioxanivorans CB1190] gi|326954174|gb|AEA27871.1| glycine oxidase ThiO [Pseudonocardia dioxanivorans CB1190] Length=381 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 151/337 (45%), Positives = 190/337 (57%), Gaps = 25/337 (7%) Query 20 LSVARRAAQAGWPVR-VHRSDERGASWVAGGMLAPHSEGWPGEERLLRLGLQSLRLWREG 78 LS A RAA G+ V V + GASWVAGGMLAP +E WPGEE LL LG+ S+ LW E Sbjct 18 LSCAWRAAADGFAVTLVDAAPASGASWVAGGMLAPVTEAWPGEEALLELGVASVALWPE- 76 Query 79 SFLDGLG-----PQLVTAHESLVVAVDRADVADLRTVADWLSAQGHPV--IWESAARDVE 131 + LG P + ++V A D A+L +A L G PV + R +E Sbjct 77 -YAARLGEAAGQPAGLRTEGTVVAATGSGDRAELDALAAHLGRIGRPVERLGGRELRRLE 135 Query 132 PLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSL-----------SDV 180 P + +R G P +LAVDNR LL AL E+ GV + ++ + ++ Sbjct 136 PAIGPEVRGGLSVPDDLAVDNRMLLAALRAAAEKAGVTFVARNAVAVTGTTVTCDDGEEI 195 Query 181 DAHTVVIANGIDAPALWPGLP--IRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLV 238 A V++A G + AL P L +RPVKGE+LRL RPG P P R +RA V GR VY V Sbjct 196 AADAVLVAAGARSAALHPALDGLVRPVKGEILRLAHRPGAFPAPVRTVRALVDGRPVYAV 255 Query 239 PRSDG-VVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDN 297 PR G +VVGATQ + G DT P V GVRDLL D VLP + E+ L E AGLRP +PDN Sbjct 256 PRDGGGLVVGATQADVGFDTEPTVGGVRDLLRDVERVLPGVAEFALLEVAAGLRPGSPDN 315 Query 298 LPLVQRLD-SRTLVAAGHGRSGFLLAPWTAEQIVSEL 333 LPL+ L LVA GH R+G LLAP T E +++ L Sbjct 316 LPLIGGLGPDGPLVATGHHRNGILLAPVTVEAVLALL 352 >gi|302530627|ref|ZP_07282969.1| glycine oxidase ThiO [Streptomyces sp. AA4] gi|302439522|gb|EFL11338.1| glycine oxidase ThiO [Streptomyces sp. AA4] Length=361 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 139/308 (46%), Positives = 176/308 (58%), Gaps = 30/308 (9%) Query 42 GASWVAGGMLAPHSEGWPGEERLLRLGLQSLRLWREGSFLD----GLGPQLVTAHESLVV 97 GASW+AGGMLAP +E WPGEE +L LG SLR W G D G P L H ++VV Sbjct 42 GASWLAGGMLAPVTEAWPGEEAVLSLGEASLRRW-PGFARDLADEGTDPGLAE-HGTIVV 99 Query 98 AVDRADVADLRTVADWLSAQGHPVIWESAARDVEPL-------LAQGI---RHGFRAPTE 147 D AD L +A +L + G RDVE L LA G+ R G P + Sbjct 100 GFDSADAGHLDILAGYLRSLG---------RDVETLTGREVKRLAPGVGSVRSGLHVPGD 150 Query 148 LAVDNRALLDALCRDCERLGVRWSSQ-VSSLSDVDAHTVVIANGIDAPALWPGLP--IRP 204 LAVDNR LL AL + GV + + + SLS+V V++A G L P L +RP Sbjct 151 LAVDNRKLLTALSEAATKRGVEFRRERLRSLSEVSG-PVILAAGAWTGQLHPLLEHAVRP 209 Query 205 VKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSDG-VVVGATQYEHGRDTAPVVSG 263 +KGE+LRLR R GC+P P +RA V GR +YLVPR DG +V+GATQYE G D A G Sbjct 210 LKGEILRLRPRRGCLPPPPYTVRAMVEGRPIYLVPREDGELVLGATQYEAGFDQAVTARG 269 Query 264 VRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQRLDSRTLVAAGHGRSGFLLAP 323 VR+LL+ A +LP + EYEL E AGLR + D LP + + A GH R+G L+AP Sbjct 270 VRELLEGAERILPGITEYELVEVAAGLRAASRDALPYIGEVREGVYAATGHHRNGLLMAP 329 Query 324 WTAEQIVS 331 TA+ +V+ Sbjct 330 ATADAVVA 337 >gi|257057423|ref|YP_003135255.1| glycine oxidase [Saccharomonospora viridis DSM 43017] gi|256587295|gb|ACU98428.1| glycine oxidase [Saccharomonospora viridis DSM 43017] Length=375 Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 144/346 (42%), Positives = 190/346 (55%), Gaps = 30/346 (8%) Query 10 LAVIGGGVIGLSVARRAAQAGWPVRVHRSD--ERGASWVAGGMLAPHSEGWPGEERLLRL 67 LAV+G GVIGL+VA +AA AG V V + GASWVAGGMLAP +E WPGEE L L Sbjct 6 LAVVGAGVIGLAVAWKAAAAGHRVTVFDPEPARGGASWVAGGMLAPVAEAWPGEEAALAL 65 Query 68 GLQSLRLW-------REGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQGHP 120 G +SLR W R F GL Q +++ A D AD L + +L G Sbjct 66 GEESLRRWPRFARELRAAGFDCGLSEQ-----GTIIAAFDHADAEQLDILRQYLDGIGRQ 120 Query 121 VIWESAA--RDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLS 178 + + R EP L +R G P+++ VDNR LL+AL G ++ + + Sbjct 121 ATFVTGRGLRKTEPGLG-AVRSGLLVPSDVFVDNRKLLEALLSAARSRGAQFVLETAVRL 179 Query 179 DVDA----------HTVVIANGIDAPALWPGLP--IRPVKGEVLRLRWRPGCMPLPQRVI 226 D+ VV+A G + L P L +RP+KGEVLRLR R G +P P+ + Sbjct 180 TGDSVATASRTRRFDAVVLAAGAHSGRLHPELATAVRPLKGEVLRLRCRRGTLPPPRHTV 239 Query 227 RARVRGRQVYLVPRSDG-VVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAE 285 RA GR VYLVPR +G +V+GATQYE G DTA GVR+L++ A + P + EYEL E Sbjct 240 RAVSEGRPVYLVPRENGGLVLGATQYEAGFDTAVTARGVRELIEAAERIFPGVAEYELLE 299 Query 286 CEAGLRPMTPDNLPLVQRLDSRTLVAAGHGRSGFLLAPWTAEQIVS 331 AGLR + DN+P + L A GH R+G LLAP TA+ +++ Sbjct 300 TAAGLRAGSADNMPYLGPLRDGVYAATGHHRNGLLLAPVTADAVLA 345 >gi|319948302|ref|ZP_08022449.1| thiamine biosynthesis oxidoreductase ThiO [Dietzia cinnamea P4] gi|319438022|gb|EFV92995.1| thiamine biosynthesis oxidoreductase ThiO [Dietzia cinnamea P4] Length=317 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 120/248 (49%), Positives = 146/248 (59%), Gaps = 29/248 (11%) Query 42 GASWVAGGMLAPHSEGWPGEERLLRLGLQSLRLWREGSFLDGL------GPQLVTAHESL 95 GA+WVAGGMLAP SE WPGEE + LG+ SLR W FLD L GP + TA + Sbjct 59 GAAWVAGGMLAPFSEAWPGEEAVFALGVDSLRRWP--GFLDALAPHVPPGPPVRTAGYTH 116 Query 96 VVAVDRADVADLRTVADWLSAQGHPVIWESAA-------------------RDVEPLLAQ 136 ++AVD AD DL +W ++Q P A R+ EP LA+ Sbjct 117 MLAVDEADARDLDMAMEWAASQPDPTRGTDPAGTNGGVTEADLRRVTRRELREAEPSLAR 176 Query 137 GIRHGFRAPTELAVDNRALLDALCRDCERLGVRWS-SQVSSLSDVDAHTVVIANGIDAPA 195 R +R +E AVDNR LL AL R C GV W V+SL D+DA VV+A G + Sbjct 177 VARAAYRMDSEGAVDNRVLLAALTRACRAEGVTWKRGAVASLDDLDADRVVLAAGTGSAD 236 Query 196 LWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSDGVVVGATQYEHGR 255 L GLP+RPVKGEVLRLR RPGC P+ V+RA VRGR +YLVPR+ G+VVGATQ+EHG Sbjct 237 LA-GLPVRPVKGEVLRLRSRPGCEDPPRGVVRAFVRGRPLYLVPRAGGLVVGATQHEHGD 295 Query 256 DTAPVVSG 263 D V+G Sbjct 296 DRQVTVAG 303 >gi|334564778|ref|ZP_08517769.1| d-amino acid oxidase [Corynebacterium bovis DSM 20582] Length=337 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 129/305 (43%), Positives = 169/305 (56%), Gaps = 26/305 (8%) Query 50 MLAPHSEGWPGEERLLRLGLQSLRLWRE-----GSFLDGLGPQLVTAHESLVVAVDRADV 104 ML ++E WPG+E LL G+ +L WR G +G + V ++++ VD AD Sbjct 1 MLGAYTEAWPGDEDLLHQGVTALAAWRRLRAELGEEWEG---RPVFHDGTVLLGVDDADA 57 Query 105 ADLRTVADWLSAQGHPVIWE---SAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCR 161 AD+ VAD L + + RD EP L +G+R E AVDNR +L AL Sbjct 58 ADVGRVADLLDRETPGAVTRLTRRELRDREPSLRRGVRAAVACDAEFAVDNRRVLAALAA 117 Query 162 DCERLGVRWSSQ-VSSLSDVDAHTVVIANGIDA--PALWPGLPIRPVKGEVLRLRWRPGC 218 C LGVR++ + V+SL +V VV+A G A +RPVKGEV+RLR R G Sbjct 118 RCRDLGVRFTRRTVASLGEVTTPVVVLAAGHAAGDLLPALRPLLRPVKGEVVRLRRRAGS 177 Query 219 MPLPQRVIRARVRGRQVYLVPRSDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPAL 278 +P P R +RARV GR +Y+VPR DG VVGAT+YEHG D P GVR LLDDA ++P L Sbjct 178 LPGPTRTVRARVHGRALYVVPRWDGCVVGATEYEHGVDREPTAGGVRQLLDDAAELVPGL 237 Query 279 GEYELAECEAGLRPMTPDNLPLV------------QRLDSRTLVAAGHGRSGFLLAPWTA 326 ++E E AGLRP +PDNLPLV D +VA GHGR+G L + T Sbjct 238 DDHEFTEVIAGLRPYSPDNLPLVGTWTGPVPAPWPDGADRHLVVAVGHGRNGVLHSAVTG 297 Query 327 EQIVS 331 E + + Sbjct 298 EIVAA 302 >gi|296393652|ref|YP_003658536.1| glycine oxidase ThiO [Segniliparus rotundus DSM 44985] gi|296180799|gb|ADG97705.1| glycine oxidase ThiO [Segniliparus rotundus DSM 44985] Length=374 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 168/353 (48%), Positives = 201/353 (57%), Gaps = 30/353 (8%) Query 7 TGSLAVIGGGVIGLSVARRAAQAGWPVRV-HRS------DERGASWVAGGMLAPHSEGWP 59 T SL ++G GVIGLS+A RAAQ G VRV RS ASWVAGGMLAP SE WP Sbjct 2 TRSLDILGAGVIGLSIAWRAAQRGRSVRVWDRSVGAPSQPGASASWVAGGMLAPFSEAWP 61 Query 60 GEERLLRLGLQSLRLWREGSFLDGLGPQ-----LVTAHESLVVAVDRADVADLRTVADWL 114 G E LLRLG SL W +F LG ++ A +LVV AD+A L + Sbjct 62 GHEPLLRLGADSLARWP--AFAAELGANSPDGTVLAAQGTLVVGATAADLAALAPGLE-- 117 Query 115 SAQGHPVIWESAAR----DVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRW 170 SA+G + +AR ++EP LA +R G+ P E A DNRALL AL GV + Sbjct 118 SARGAGLDSRRSARAELREIEPGLAADVRGGWILPQEPAADNRALLAALAAAARGAGVEF 177 Query 171 SSQV-SSLSDVDAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRAR 229 +Q + L D A +V+A G APAL PGLP+RPVKGE+LRL P P+R IRA Sbjct 178 VAQSPAQLPDSGADDLVVAVGAAAPALLPGLPVRPVKGEILRLAASSRTAPPPKRTIRAL 237 Query 230 VRGRQVYLVPRSDGVVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAG 289 VRGR VYLVPR DGVVVGAT+ E + +LL DA +LP L +YEL E AG Sbjct 238 VRGRHVYLVPRRDGVVVGATELEGDARAGVSAQAIVELLSDALAILPGLADYELVEACAG 297 Query 290 LRPMTPDNLPLV---------QRLDSRTLVAAGHGRSGFLLAPWTAEQIVSEL 333 RP+TPD PL+ R R LVA GHGR G LLAP TA+ V+ L Sbjct 298 FRPVTPDRCPLLGWTSRPATGPRSAGRCLVATGHGRDGMLLAPLTADLAVALL 350 >gi|291298438|ref|YP_003509716.1| glycine oxidase ThiO [Stackebrandtia nassauensis DSM 44728] gi|290567658|gb|ADD40623.1| glycine oxidase ThiO [Stackebrandtia nassauensis DSM 44728] Length=349 Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 144/330 (44%), Positives = 185/330 (57%), Gaps = 25/330 (7%) Query 20 LSVARRAAQAGWPVRVHRSDE-RGASWVAGGMLAPHSEGWPGEERLLRLGLQSLRLWREG 78 LS+AR G V VH + GAS VA GMLAP +E GEE L RL L S +LW E Sbjct 16 LSIARELTARGMTVTVHDPEPGSGASTVAAGMLAPVTESQFGEEPLSRLSLASAKLWPE- 74 Query 79 SFLDGLGPQLVTAHE---SLVVAVDRADVADL----RTVADW-LSAQGHPVIWESAARDV 130 F GLG + A+ ++ V VD AD A+L + D+ L+ Q + + AR Sbjct 75 -FAAGLG--ITDAYRDTGTIFVGVDAADAAELDRQLKLYRDYGLACQP---LSAAEARQH 128 Query 131 EPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRW-SSQVSSLSDVDAHTVVIAN 189 PLL+ + G A T+ VD R + AL C GV + +V+ S VDA +V+A Sbjct 129 IPLLSPSVSKGLLAATDHQVDTRRVHAALLEACRAAGVNFVPRRVTDPSTVDAGLLVVAA 188 Query 190 GIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSDG-VVVGA 248 G + L GLP+RPV+G+V+RLR P + +RARVRGR VY+VPR+ G VV+GA Sbjct 189 GSWSAKLL-GLPVRPVRGQVVRLRG-PDEL---GYTVRARVRGRTVYVVPRASGEVVIGA 243 Query 249 TQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLVQRL-DSR 307 TQ + G DTA LL D VLP L EYELAE GLRP TPDN PL+ R D R Sbjct 244 TQDDRGFDTAATAGDTNALLRDTLEVLPELAEYELAEVNVGLRPGTPDNAPLLGRTADPR 303 Query 308 TLVAAGHGRSGFLLAPWTAEQIVSELVSVG 337 + A GH R G LLAP TA ++ +L++ G Sbjct 304 VVAATGHFRQGILLAPITA-ALIGDLIATG 332 >gi|336119793|ref|YP_004574570.1| glycine oxidase [Microlunatus phosphovorus NM-1] gi|334687582|dbj|BAK37167.1| glycine oxidase [Microlunatus phosphovorus NM-1] Length=399 Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 148/356 (42%), Positives = 189/356 (54%), Gaps = 32/356 (8%) Query 7 TGSLAVIGGGVIGLSVARRAAQAGW-PVRVHRSDERGASWVAGGMLAPHSEGWPGEERLL 65 T + VIGGG++G + A R A AG V V + AS VA GMLAP +E EE LL Sbjct 10 TADVVVIGGGLMGRAAAWRLASAGLDAVVVAGEPQAAASNVAAGMLAPVTETTFTEELLL 69 Query 66 RLGLQSLRLW----REGSFLDGLGPQLVTAHESLVVAVDRADVADLRTVADWLSAQG--H 119 L L S+ + E S GL P + + ++ +A + D A + +AD+L+ G Sbjct 70 GLNLASMERYPSFAAEVSEASGL-PSGLRSGPTISIAYNADDAARMAQLADYLTRLGLES 128 Query 120 PVIWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVR----WSSQVS 175 + AR +EPLLA IR G P + + DNR LL AL R GVR + VS Sbjct 129 TRLTSREARQLEPLLAPTIRAGLLVPGDASCDNRQLLAALREAGGRSGVRTLTGFVHHVS 188 Query 176 SLSD------------VDAHTVVIANGIDAPALW--PGLPIRPVKGEVLRLRWRPGCMPL 221 S +D + A TVV+ANG A L P LP+RPVKG++LRL PG P Sbjct 189 STADRVTGVVLADGSEISAPTVVVANGAWAGQLTGIPALPVRPVKGQILRLD--PGRFPQ 246 Query 222 PQRVIRARVRGRQVYLVPRSDG--VVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALG 279 P V+RA RG ++YLVPR G +VVGAT E G D GV +LL DA +P Sbjct 247 PGLVVRAFTRGTEIYLVPRDSGHELVVGATSEELGFDRRVTAGGVYELLRDARLAIPMST 306 Query 280 EYELAECEAGLRPMTPDNLPLVQRLDSRTLV-AAGHGRSGFLLAPWTAEQIVSELV 334 EY LAE G RP TPDN P++ R LV A GH R+G LL P TA+ V+EL+ Sbjct 307 EYVLAETSVGYRPGTPDNAPILGRGALAGLVLATGHHRNGVLLTPITADA-VAELI 361 >gi|315501393|ref|YP_004080280.1| glycine oxidase thio [Micromonospora sp. L5] gi|315408012|gb|ADU06129.1| glycine oxidase ThiO [Micromonospora sp. L5] Length=356 Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 146/340 (43%), Positives = 185/340 (55%), Gaps = 17/340 (5%) Query 10 LAVIGGGVIGLSVARRAAQAGWPVRVHRSDER---GASWVAGGMLAPHSEGWPGEERLLR 66 +AV+G G +GL++A R AQ G V VH D+R GAS VA GML+P +E + GE L Sbjct 1 MAVVGAGPVGLAIAWRCAQRGLRVVVH--DDRPGSGASSVAAGMLSPVAEAYFGEHELTA 58 Query 67 LGLQSLRLW--REGSFLDGLGPQLVTAHE-SLVVAVDRADVADLRTVADWLSAQGHPV-- 121 L + S W + G L E +LVV + D+A+ + + G P+ Sbjct 59 LLVGSAARWPGFAAELTEASGVDLGYRTEGTLVVGLTADDLAEAGRLWSYQRGLGLPITP 118 Query 122 IWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRW-SSQVSSLSDV 180 + S RD EP LA +R G AP + VD R L+ AL ER GV ++V +LS+V Sbjct 119 LRPSELRDREPALAPRVRGGAVAPGDHQVDPRRLVAALRTAVERAGVELRPARVGALSEV 178 Query 181 DAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPR 240 DA V+A G A L GLP+RPVKG+VLRLR G P + VIR VYLVPR Sbjct 179 DARVTVVAAGCGAAGLT-GLPVRPVKGQVLRLRAPGGGPPGFRHVIRGYADSEPVYLVPR 237 Query 241 SDG-VVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLP 299 G VVVGAT E DT GV LL A ++P L EYEL E AGLRP TPDN P Sbjct 238 DSGEVVVGATVEERA-DTEVTAGGVLTLLRAAAELVPELVEYELVEAVAGLRPGTPDNAP 296 Query 300 LVQRLDSR--TLVAAGHGRSGFLLAPWTAEQIVSELVSVG 337 ++ L R L A GH R G +L P TA+ +V+EL+ G Sbjct 297 IIGPLPGRPGVLAATGHHRHGIVLTPVTAD-LVTELIVTG 335 >gi|117928197|ref|YP_872748.1| glycine oxidase ThiO [Acidothermus cellulolyticus 11B] gi|117648660|gb|ABK52762.1| glycine oxidase [Acidothermus cellulolyticus 11B] Length=404 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 147/353 (42%), Positives = 191/353 (55%), Gaps = 31/353 (8%) Query 12 VIGGGVIGLSVARRAAQAGWPVRVHRSDE-RGASWVAGGMLAPHSEGWPGEERLLRLGLQ 70 ++G GVIGL+ A R AQ G+ V V D RGAS A GMLAP +E GEE LL L ++ Sbjct 1 MVGAGVIGLATAWRCAQRGFNVTVVDPDPGRGASHYAAGMLAPVTEAHFGEESLLHLTIE 60 Query 71 SLRLWREGSFLDGL--GPQLVTAHES---LVVAVDRADVADLRTVADWLSAQG--HPVIW 123 + R R +F+ L + + + L VA D D A L + + ++ G ++ Sbjct 61 AAR--RYPAFVADLQAAAGISVGYRTTGMLAVAFDNDDRAVLAELHAYHNSLGLTSTLLS 118 Query 124 ESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRWSSQVSSLSDVDAH 183 RD EP LA IR G + VDNR L+ AL C+R+GVR+ + L DV + Sbjct 119 SRECRDREPALAPAIRAGLWVEGDHQVDNRRLVQALRAACDRVGVRFLPTEAHL-DVHGN 177 Query 184 TVVIANGI------DAPALWP----GLP------IRPVKGEVLRLRWRPGCMPLPQRVIR 227 V ANGI A W GLP +RPVKG++LRLR P PL R +R Sbjct 178 RVRGANGIPAAATVLAAGAWSPHVAGLPEAVRPPVRPVKGQILRLRVDPN-RPLLTRAVR 236 Query 228 ARVRGRQVYLVPRSDG-VVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAEC 286 A VRGR +Y+VPR G +VVG T E G D V V DLLDDA ++P L + + E Sbjct 237 AFVRGRPLYVVPRETGEIVVGGTVEEMGFDQRVTVEAVADLLDDARRLVPGLVDADFVEA 296 Query 287 EAGLRPMTPDNLPLVQRLDSRTLV-AAGHGRSGFLLAPWTAEQIVSELVSVGA 338 AGLRP +PDN P+V LV A GH R+G LLAP TA+ V+EL++ GA Sbjct 297 SAGLRPGSPDNGPMVGPSGVDGLVIATGHYRNGILLAPITADA-VAELLATGA 348 >gi|302869932|ref|YP_003838569.1| glycine oxidase ThiO [Micromonospora aurantiaca ATCC 27029] gi|302572791|gb|ADL48993.1| glycine oxidase ThiO [Micromonospora aurantiaca ATCC 27029] Length=356 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 147/346 (43%), Positives = 186/346 (54%), Gaps = 29/346 (8%) Query 10 LAVIGGGVIGLSVARRAAQAGWPVRVHRSDER---GASWVAGGMLAPHSEGWPGEERLLR 66 +AV+G G +GL++A R AQ G V VH D+R GAS VA GML+P +E + GE L Sbjct 1 MAVVGAGPVGLAIAWRCAQRGLRVVVH--DDRPGSGASSVAAGMLSPVAEAYFGEHELTA 58 Query 67 LGLQSLRLWREGSFLDGLGPQLVTA---------HESLVVAVDRADVADLRTVADWLSAQ 117 L + S W G +L A +LVV + D+A+ + + Sbjct 59 LLIGSAARW------PGFAAELAGASGVDIGYRTEGTLVVGLTADDLAEAGRLWSYQRGL 112 Query 118 GHPV--IWESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLGVRW-SSQV 174 G P+ + S RD EP LA +R G AP + VD R L+ AL ER GV ++V Sbjct 113 GLPITPLRPSELRDREPALAPRVRGGAVAPGDHQVDPRRLVAALRTAVERAGVELRPARV 172 Query 175 SSLSDVDAHTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQ 234 +LS+VDA V+A G A AL GLP+RPVKG+VLRLR G P + VIR Sbjct 173 GALSEVDAQVTVVAAGCGAAALT-GLPVRPVKGQVLRLRAPGGGPPGFRHVIRGYADSEP 231 Query 235 VYLVPRSDG-VVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPM 293 VYLVPR G VVVGAT E DT GV LL A ++P L EYEL E AGLRP Sbjct 232 VYLVPRDSGEVVVGATVEERA-DTEVTAGGVLTLLRAAAELVPELVEYELVEAVAGLRPG 290 Query 294 TPDNLPLVQRL--DSRTLVAAGHGRSGFLLAPWTAEQIVSELVSVG 337 TPDN P++ L S L A GH R G +L P TA+ +V+EL+ G Sbjct 291 TPDNAPIIGPLPGQSGVLAATGHHRHGIVLTPVTAD-LVTELIVTG 335 >gi|145596399|ref|YP_001160696.1| glycine oxidase ThiO [Salinispora tropica CNB-440] gi|145305736|gb|ABP56318.1| glycine oxidase ThiO [Salinispora tropica CNB-440] Length=385 Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 142/338 (43%), Positives = 181/338 (54%), Gaps = 15/338 (4%) Query 10 LAVIGGGVIGLSVARRAAQAGWPVRVHRSDE-RGASWVAGGMLAPHSEGWPGEERLLRLG 68 +AV+G G IGL++A R A G V VH D GA + A GMLAP +E + GE L L Sbjct 9 VAVVGAGPIGLAIAWRCAVRGLRVVVHDPDPGSGAVYAAAGMLAPVAEAYFGEHELTGLL 68 Query 69 LQSLRLWREGSFLDGL--GPQLVTAHE-SLVVAVDRADVADLRTVADWLSAQGHPV--IW 123 +S W + G L E +L+V + D+A R + + G PV + Sbjct 69 TESAARWPAFAAELAAASGTDLGYRSEGTLMVGLTTDDLAVARRLWAYQQGLGLPVTPLR 128 Query 124 ESAARDVEPLLAQGIRHGFRAPTELAVDNRALLDALCRDCERLG-VRWSSQVSSLSDVDA 182 S RD EP L+ R G A T+ VD R L+ AL ER G V + V L++V A Sbjct 129 PSELRDREPALSPRTRGGAYAGTDHQVDPRRLVSALRTATERAGGVLVPTPVQRLTEVTA 188 Query 183 HTVVIANGIDAPALWPGLPIRPVKGEVLRLRWRPGCMPLPQRVIRARVRGRQVYLVPRSD 242 T V+A G AL GLP+RPVKG+VLRLR G P Q VIR G QVYLVPR D Sbjct 189 GTTVVAAGCGTAALT-GLPVRPVKGQVLRLRAPDG--PGFQHVIRGFADGEQVYLVPRQD 245 Query 243 G-VVVGATQYEHGRDTAPVVSGVRDLLDDACTVLPALGEYELAECEAGLRPMTPDNLPLV 301 G VVVGAT E DT V LL A ++P + EYEL E AGLRP +PDN P++ Sbjct 246 GEVVVGATSEER-TDTMVTSGAVLRLLRAATDLVPEVAEYELIEALAGLRPGSPDNAPIL 304 Query 302 QRLDSR--TLVAAGHGRSGFLLAPWTAEQIVSELVSVG 337 L R L A GH R G +L P TA+ ++++L++ G Sbjct 305 GPLPGRPGVLAATGHHRHGIVLTPVTAD-LIADLIATG 341 Lambda K H 0.320 0.137 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 617544973600 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40