BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0416
Length=68
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607557|ref|NP_214930.1| sulfur carrier protein ThiS [Mycoba... 137 6e-31
gi|15827071|ref|NP_301334.1| sulfur carrier protein ThiS [Mycoba... 100 6e-20
gi|254818977|ref|ZP_05223978.1| sulfur carrier protein ThiS [Myc... 95.9 2e-18
gi|41409997|ref|NP_962833.1| sulfur carrier protein ThiS [Mycoba... 89.4 2e-16
gi|342859104|ref|ZP_08715758.1| sulfur carrier protein ThiS [Myc... 88.6 3e-16
gi|333989027|ref|YP_004521641.1| thiamine biosynthesis protein T... 83.2 1e-14
gi|240168882|ref|ZP_04747541.1| thiamine biosynthesis protein Th... 76.6 1e-12
gi|118618238|ref|YP_906570.1| thiamine biosynthesis protein ThiS... 75.9 2e-12
gi|126433148|ref|YP_001068839.1| sulfur carrier protein ThiS [My... 75.5 3e-12
gi|108797526|ref|YP_637723.1| sulfur carrier protein ThiS [Mycob... 75.1 3e-12
gi|120401724|ref|YP_951553.1| sulfur carrier protein ThiS [Mycob... 73.2 1e-11
gi|296167874|ref|ZP_06850057.1| thiamine biosynthesis protein Th... 69.7 1e-10
gi|317124533|ref|YP_004098645.1| thiamine biosynthesis protein T... 63.9 6e-09
gi|118472483|ref|YP_885197.1| sulfur carrier protein ThiS [Mycob... 63.9 7e-09
gi|145220801|ref|YP_001131479.1| sulfur carrier protein ThiS [My... 63.5 9e-09
gi|255021547|ref|ZP_05293590.1| Sulfur carrier protein ThiS [Aci... 55.8 2e-06
gi|169631295|ref|YP_001704944.1| putative thiamine biosynthesis ... 55.8 2e-06
gi|134097118|ref|YP_001102779.1| thiamine-biosynthesis [Saccharo... 54.3 6e-06
gi|92118391|ref|YP_578120.1| thiamine biosynthesis protein ThiS ... 51.2 5e-05
gi|326384631|ref|ZP_08206309.1| sulfur carrier protein ThiS [Gor... 50.8 7e-05
gi|296141421|ref|YP_003648664.1| thiamine biosynthesis protein T... 50.8 7e-05
gi|291009666|ref|ZP_06567639.1| thiamine-biosynthesis [Saccharop... 50.4 8e-05
gi|291440156|ref|ZP_06579546.1| sulfur transfer protein [Strepto... 49.3 2e-04
gi|343924499|ref|ZP_08764048.1| thiamine biosynthesis protein Th... 48.9 2e-04
gi|167753746|ref|ZP_02425873.1| hypothetical protein ALIPUT_0202... 48.9 3e-04
gi|125973115|ref|YP_001037025.1| thiamine biosynthesis protein T... 48.1 4e-04
gi|300781787|ref|ZP_07091641.1| thiamine biosynthesis protein Th... 48.1 4e-04
gi|198282928|ref|YP_002219249.1| thiamine biosynthesis protein T... 48.1 4e-04
gi|283779491|ref|YP_003370246.1| thiamine biosynthesis protein T... 48.1 5e-04
gi|72161447|ref|YP_289104.1| ThiS, thiamine-biosynthesis [Thermo... 47.8 5e-04
gi|255036220|ref|YP_003086841.1| thiamine biosynthesis protein T... 47.8 5e-04
gi|269127244|ref|YP_003300614.1| thiamine biosynthesis protein T... 47.8 6e-04
gi|333030642|ref|ZP_08458703.1| thiamine biosynthesis protein Th... 47.8 6e-04
gi|333030644|ref|ZP_08458705.1| thiamine biosynthesis protein Th... 47.4 7e-04
gi|75676649|ref|YP_319070.1| ThiS, thiamine-biosynthesis [Nitrob... 47.4 7e-04
gi|291298439|ref|YP_003509717.1| thiamine biosynthesis protein T... 47.4 7e-04
gi|296393653|ref|YP_003658537.1| thiamine biosynthesis protein T... 47.4 7e-04
gi|344999142|ref|YP_004801996.1| thiamine biosynthesis protein T... 47.4 8e-04
gi|302533980|ref|ZP_07286322.1| thiamine biosynthesis protein Th... 47.0 0.001
gi|317506777|ref|ZP_07964555.1| thiamine biosynthesis protein Th... 47.0 0.001
gi|302550823|ref|ZP_07303165.1| thiamine biosynthesis protein Th... 46.6 0.001
gi|324998505|ref|ZP_08119617.1| thiamine-biosynthesis [Pseudonoc... 46.6 0.001
gi|85715979|ref|ZP_01046956.1| ThiS, thiamine-biosynthesis [Nitr... 46.6 0.001
gi|308049742|ref|YP_003913308.1| thiamine biosynthesis protein T... 46.2 0.001
gi|110636664|ref|YP_676871.1| thiamine biosynthesis sulfur trans... 46.2 0.002
gi|226361318|ref|YP_002779096.1| thiamine biosynthesis protein T... 46.2 0.002
gi|317494909|ref|ZP_07953319.1| thiamine biosynthesis protein Th... 46.2 0.002
gi|27381767|ref|NP_773296.1| thiamin biosynthesis protein [Brady... 45.8 0.002
gi|334564779|ref|ZP_08517770.1| thiamine biosynthesis protein Th... 45.8 0.002
gi|256371935|ref|YP_003109759.1| thiamine biosynthesis protein T... 45.8 0.002
>gi|15607557|ref|NP_214930.1| sulfur carrier protein ThiS [Mycobacterium tuberculosis H37Rv]
gi|15839802|ref|NP_334839.1| sulfur carrier protein ThiS [Mycobacterium tuberculosis CDC1551]
gi|31791594|ref|NP_854087.1| sulfur carrier protein ThiS [Mycobacterium bovis AF2122/97]
76 more sequence titles
Length=68
Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/68 (100%), Positives = 68/68 (100%), Gaps = 0/68 (0%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE
Sbjct 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
Query 61 VVTAVQGG 68
VVTAVQGG
Sbjct 61 VVTAVQGG 68
>gi|15827071|ref|NP_301334.1| sulfur carrier protein ThiS [Mycobacterium leprae TN]
gi|221229549|ref|YP_002502965.1| sulfur carrier protein ThiS [Mycobacterium leprae Br4923]
gi|4154055|emb|CAA22709.1| hypothetical protein MLCB1450.25 [Mycobacterium leprae]
gi|13092619|emb|CAC29806.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219932656|emb|CAR70391.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=74
Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/74 (72%), Positives = 60/74 (82%), Gaps = 6/74 (8%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICEL------R 54
MIVVVNE+ VEV+EQTT+AALL+SLGF GIAVA+ FSVLPRS WATKI EL
Sbjct 1 MIVVVNERPVEVNEQTTVAALLESLGFPASGIAVAVEFSVLPRSYWATKISELPAVTGRS 60
Query 55 KPVRLEVVTAVQGG 68
+P+RLEVVTAVQGG
Sbjct 61 EPIRLEVVTAVQGG 74
>gi|254818977|ref|ZP_05223978.1| sulfur carrier protein ThiS [Mycobacterium intracellulare ATCC
13950]
Length=69
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/69 (69%), Positives = 60/69 (87%), Gaps = 1/69 (1%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELR-KPVRL 59
MI++VNE++V+VD TT++ALLDSLGF DRG+AVA++ +VLPRS WAT++ EL PVRL
Sbjct 1 MIILVNEKEVDVDAHTTVSALLDSLGFPDRGVAVAMDDAVLPRSRWATELSELPGAPVRL 60
Query 60 EVVTAVQGG 68
EVVTAVQGG
Sbjct 61 EVVTAVQGG 69
>gi|41409997|ref|NP_962833.1| sulfur carrier protein ThiS [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118465936|ref|YP_883872.1| sulfur carrier protein ThiS [Mycobacterium avium 104]
gi|254777184|ref|ZP_05218700.1| sulfur carrier protein ThiS [Mycobacterium avium subsp. avium
ATCC 25291]
gi|41398830|gb|AAS06449.1| hypothetical protein MAP_3899 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118167223|gb|ABK68120.1| thiamine biosynthesis protein ThiS [Mycobacterium avium 104]
gi|336460360|gb|EGO39260.1| thiamine biosynthesis protein ThiS [Mycobacterium avium subsp.
paratuberculosis S397]
Length=65
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/68 (70%), Positives = 55/68 (81%), Gaps = 3/68 (4%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
MIVVVNEQ+V+VD TT+AALLD LGFG RG+AVA++ +VLPRS W T EL + RLE
Sbjct 1 MIVVVNEQKVDVDAHTTVAALLDELGFGGRGVAVAVDDAVLPRSRWTT---ELSEGARLE 57
Query 61 VVTAVQGG 68
VVTAVQGG
Sbjct 58 VVTAVQGG 65
>gi|342859104|ref|ZP_08715758.1| sulfur carrier protein ThiS [Mycobacterium colombiense CECT 3035]
gi|342133345|gb|EGT86548.1| sulfur carrier protein ThiS [Mycobacterium colombiense CECT 3035]
Length=65
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/68 (65%), Positives = 56/68 (83%), Gaps = 3/68 (4%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
MIV+VNE+ ++VD TT+AALLDSLGF DRG+AVAL+ +V+PRS WATK+ + RLE
Sbjct 1 MIVMVNEKNIDVDAHTTVAALLDSLGFPDRGVAVALDDAVIPRSRWATKLFD---GARLE 57
Query 61 VVTAVQGG 68
+VTAVQGG
Sbjct 58 IVTAVQGG 65
>gi|333989027|ref|YP_004521641.1| thiamine biosynthesis protein ThiS [Mycobacterium sp. JDM601]
gi|333484995|gb|AEF34387.1| thiamine biosynthesis protein ThiS [Mycobacterium sp. JDM601]
Length=65
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/68 (65%), Positives = 54/68 (80%), Gaps = 3/68 (4%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
MI+ VNE+QVEV E TT+AALL S+G+ DRGIAVA++ +VLPRS WAT + + RLE
Sbjct 1 MIINVNEKQVEVAEATTVAALLASMGYPDRGIAVAVDQAVLPRSRWATTLSD---GARLE 57
Query 61 VVTAVQGG 68
VVTAVQGG
Sbjct 58 VVTAVQGG 65
>gi|240168882|ref|ZP_04747541.1| thiamine biosynthesis protein ThiS [Mycobacterium kansasii ATCC
12478]
Length=65
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/68 (77%), Positives = 58/68 (86%), Gaps = 3/68 (4%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
MIVVVNEQQVEVDEQTT+AALL SLGF DRG+AVAL+ ++LPRSDWAT + E RLE
Sbjct 1 MIVVVNEQQVEVDEQTTVAALLQSLGFPDRGVAVALDCALLPRSDWATMLSEGD---RLE 57
Query 61 VVTAVQGG 68
VVTAVQGG
Sbjct 58 VVTAVQGG 65
>gi|118618238|ref|YP_906570.1| thiamine biosynthesis protein ThiS [Mycobacterium ulcerans Agy99]
gi|183980742|ref|YP_001849033.1| thiamine biosynthesis protein ThiS [Mycobacterium marinum M]
gi|118570348|gb|ABL05099.1| thiamine biosynthesis protein ThiS [Mycobacterium ulcerans Agy99]
gi|183174068|gb|ACC39178.1| thiamine biosynthesis protein ThiS [Mycobacterium marinum M]
Length=65
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/54 (76%), Positives = 45/54 (84%), Gaps = 3/54 (5%)
Query 15 QTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLEVVTAVQGG 68
QTT+AALL SLGF DRGIAVAL+ +VLPRSDWAT EL + RLEVVTAVQGG
Sbjct 15 QTTVAALLQSLGFPDRGIAVALDLAVLPRSDWAT---ELSEGDRLEVVTAVQGG 65
>gi|126433148|ref|YP_001068839.1| sulfur carrier protein ThiS [Mycobacterium sp. JLS]
gi|126232948|gb|ABN96348.1| thiamine biosynthesis protein ThiS [Mycobacterium sp. JLS]
Length=65
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/68 (56%), Positives = 52/68 (77%), Gaps = 3/68 (4%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M +VVN + V +DEQTT+A L+ +GF ++GIAVA+++SVLPR++W T LR R+E
Sbjct 1 MKIVVNNEDVHLDEQTTVAQLVARMGFPEKGIAVAVDWSVLPRTEWETP---LRDGARVE 57
Query 61 VVTAVQGG 68
VVTAVQGG
Sbjct 58 VVTAVQGG 65
>gi|108797526|ref|YP_637723.1| sulfur carrier protein ThiS [Mycobacterium sp. MCS]
gi|119866612|ref|YP_936564.1| sulfur carrier protein ThiS [Mycobacterium sp. KMS]
gi|108767945|gb|ABG06667.1| thiamine biosynthesis protein ThiS [Mycobacterium sp. MCS]
gi|119692701|gb|ABL89774.1| thiamine biosynthesis protein ThiS [Mycobacterium sp. KMS]
Length=65
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/68 (56%), Positives = 52/68 (77%), Gaps = 3/68 (4%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M +VVN + V +DEQTT+A L+ +GF ++GIAVA+++SVLPR++W T LR R+E
Sbjct 1 MRIVVNNEDVHLDEQTTVAQLVARMGFPEKGIAVAVDWSVLPRTEWETP---LRDGARVE 57
Query 61 VVTAVQGG 68
VVTAVQGG
Sbjct 58 VVTAVQGG 65
>gi|120401724|ref|YP_951553.1| sulfur carrier protein ThiS [Mycobacterium vanbaalenii PYR-1]
gi|119954542|gb|ABM11547.1| thiamine biosynthesis protein ThiS [Mycobacterium vanbaalenii
PYR-1]
Length=65
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/68 (56%), Positives = 52/68 (77%), Gaps = 3/68 (4%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M V VN++ VEVD+ TT+AALLD LGF ++GIAVA++++V+PRS W T + + K +E
Sbjct 1 MKVTVNDELVEVDDATTVAALLDRLGFPEKGIAVAVDWAVIPRSQWDTALTDGAK---VE 57
Query 61 VVTAVQGG 68
VV AVQGG
Sbjct 58 VVAAVQGG 65
>gi|296167874|ref|ZP_06850057.1| thiamine biosynthesis protein ThiS [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896999|gb|EFG76622.1| thiamine biosynthesis protein ThiS [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=65
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/68 (67%), Positives = 56/68 (83%), Gaps = 3/68 (4%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
MIVVVNE++VEVDE+ T+AALL+SLG+ DRG+AVA+ +VLPRSDW T + + RLE
Sbjct 1 MIVVVNEKKVEVDERITVAALLESLGYPDRGVAVAMGDAVLPRSDWTTTLFD---GARLE 57
Query 61 VVTAVQGG 68
VVTAVQGG
Sbjct 58 VVTAVQGG 65
>gi|317124533|ref|YP_004098645.1| thiamine biosynthesis protein ThiS [Intrasporangium calvum DSM
43043]
gi|315588621|gb|ADU47918.1| thiamine biosynthesis protein ThiS [Intrasporangium calvum DSM
43043]
Length=66
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (71%), Gaps = 2/68 (2%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M V+VN +Q ++ TT+AAL+ +LG RGIA+AL+ ++PRS WAT++ L LE
Sbjct 1 MNVIVNGEQHRLEPGTTVAALVGTLGLPSRGIAIALDRVIVPRSRWATEV--LSPGAELE 58
Query 61 VVTAVQGG 68
VVTA+QGG
Sbjct 59 VVTAMQGG 66
>gi|118472483|ref|YP_885197.1| sulfur carrier protein ThiS [Mycobacterium smegmatis str. MC2
155]
gi|118173770|gb|ABK74666.1| thiamine biosynthesis protein ThiS [Mycobacterium smegmatis str.
MC2 155]
Length=66
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/68 (52%), Positives = 47/68 (70%), Gaps = 3/68 (4%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
+ + VN + VEVD+ TI LL++ GF ++GIAVAL++SVL RS+W L R+E
Sbjct 2 ITITVNGESVEVDDTITIERLLETRGFPEKGIAVALDWSVLHRSEWDQT---LSDGARIE 58
Query 61 VVTAVQGG 68
VVTAVQGG
Sbjct 59 VVTAVQGG 66
>gi|145220801|ref|YP_001131479.1| sulfur carrier protein ThiS [Mycobacterium gilvum PYR-GCK]
gi|315442246|ref|YP_004075125.1| thiamine biosynthesis protein ThiS [Mycobacterium sp. Spyr1]
gi|145213287|gb|ABP42691.1| thiamine biosynthesis protein ThiS [Mycobacterium gilvum PYR-GCK]
gi|315260549|gb|ADT97290.1| thiamine biosynthesis protein ThiS [Mycobacterium sp. Spyr1]
Length=65
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (70%), Gaps = 3/68 (4%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M V N++ VEVD+ TT+ LL LG ++GIAVA++++V+PRS W T L ++E
Sbjct 1 MKVTCNDEAVEVDDGTTVTQLLGLLGIPEKGIAVAVDWAVIPRSHWDTA---LTDGAKVE 57
Query 61 VVTAVQGG 68
VVTAVQGG
Sbjct 58 VVTAVQGG 65
>gi|255021547|ref|ZP_05293590.1| Sulfur carrier protein ThiS [Acidithiobacillus caldus ATCC 51756]
gi|340782421|ref|YP_004749028.1| sulfur carrier protein ThiS [Acidithiobacillus caldus SM-1]
gi|254968935|gb|EET26454.1| Sulfur carrier protein ThiS [Acidithiobacillus caldus ATCC 51756]
gi|340556573|gb|AEK58327.1| Sulfur carrier protein ThiS [Acidithiobacillus caldus SM-1]
Length=66
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/68 (49%), Positives = 42/68 (62%), Gaps = 2/68 (2%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
MIV VN+Q E + T +A LL +LGF + +AV LN VLPRS A LR+ RLE
Sbjct 1 MIVTVNDQAYEARDGTDVAELLQNLGFAGQRVAVELNREVLPRSLHAQ--TRLREGDRLE 58
Query 61 VVTAVQGG 68
++ AV GG
Sbjct 59 IIRAVGGG 66
>gi|169631295|ref|YP_001704944.1| putative thiamine biosynthesis protein ThiS [Mycobacterium abscessus
ATCC 19977]
gi|169243262|emb|CAM64290.1| Putative thiamine biosynthesis protein ThiS [Mycobacterium abscessus]
Length=65
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/68 (49%), Positives = 42/68 (62%), Gaps = 3/68 (4%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M + VN EV E I LL+ LGF + GIAVA+N +V+P+SDW T + +E
Sbjct 1 MNIQVNGDAREVTEGANIWQLLEQLGFPESGIAVAINHTVVPKSDWDTVVS---VGATVE 57
Query 61 VVTAVQGG 68
VVTAVQGG
Sbjct 58 VVTAVQGG 65
>gi|134097118|ref|YP_001102779.1| thiamine-biosynthesis [Saccharopolyspora erythraea NRRL 2338]
gi|133909741|emb|CAL99853.1| thiamine-biosynthesis [Saccharopolyspora erythraea NRRL 2338]
Length=66
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/68 (46%), Positives = 43/68 (64%), Gaps = 2/68 (2%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M VVVN + +V E T+ A+L G +RG+AVAL+ +V+PR+ W LR +E
Sbjct 1 MQVVVNGESRQVPEDATLEAVLREFGVPERGVAVALDGAVVPRAAWPA--TGLRAEATVE 58
Query 61 VVTAVQGG 68
V+TAVQGG
Sbjct 59 VLTAVQGG 66
>gi|92118391|ref|YP_578120.1| thiamine biosynthesis protein ThiS [Nitrobacter hamburgensis
X14]
gi|91801285|gb|ABE63660.1| sulfur carrier protein ThiS [Nitrobacter hamburgensis X14]
Length=65
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/68 (42%), Positives = 42/68 (62%), Gaps = 3/68 (4%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M V VN +Q E+ QT + ALL L +G +A+A+NF VLP++ WA + L+ +E
Sbjct 1 MQVTVNGEQREIAAQT-VDALLSELDYGSTHVAIAVNFDVLPKNRWADTV--LKSGDEIE 57
Query 61 VVTAVQGG 68
++T QGG
Sbjct 58 IITPRQGG 65
>gi|326384631|ref|ZP_08206309.1| sulfur carrier protein ThiS [Gordonia neofelifaecis NRRL B-59395]
gi|326196598|gb|EGD53794.1| sulfur carrier protein ThiS [Gordonia neofelifaecis NRRL B-59395]
Length=65
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/69 (45%), Positives = 43/69 (63%), Gaps = 5/69 (7%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKP-VRL 59
M + VN V +DE T+ ALL LG D G+AVA++ V P+++W T I KP +
Sbjct 1 MELTVNGDTVILDEAPTVPALLAHLGLPDCGVAVAVDGIVRPKAEWDTPI----KPYAEI 56
Query 60 EVVTAVQGG 68
+V+TAVQGG
Sbjct 57 DVLTAVQGG 65
>gi|296141421|ref|YP_003648664.1| thiamine biosynthesis protein ThiS [Tsukamurella paurometabola
DSM 20162]
gi|296029555|gb|ADG80325.1| thiamine biosynthesis protein ThiS [Tsukamurella paurometabola
DSM 20162]
Length=65
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/68 (42%), Positives = 42/68 (62%), Gaps = 3/68 (4%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M + VN + +V + T+ ALL+ LG D+G+A+A+N +V PRS W + +E
Sbjct 1 MELTVNGEDRQVPDGTSAQALLELLGLPDKGVAIAVNGAVHPRSAWDAALPSY---ADVE 57
Query 61 VVTAVQGG 68
V+TAVQGG
Sbjct 58 VLTAVQGG 65
>gi|291009666|ref|ZP_06567639.1| thiamine-biosynthesis [Saccharopolyspora erythraea NRRL 2338]
Length=63
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/65 (44%), Positives = 41/65 (64%), Gaps = 2/65 (3%)
Query 4 VVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLEVVT 63
+VN + +V E T+ A+L G +RG+AVAL+ +V+PR+ W LR +EV+T
Sbjct 1 MVNGESRQVPEDATLEAVLREFGVPERGVAVALDGAVVPRAAW--PATGLRAEATVEVLT 58
Query 64 AVQGG 68
AVQGG
Sbjct 59 AVQGG 63
>gi|291440156|ref|ZP_06579546.1| sulfur transfer protein [Streptomyces ghanaensis ATCC 14672]
gi|291343051|gb|EFE70007.1| sulfur transfer protein [Streptomyces ghanaensis ATCC 14672]
Length=66
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/69 (44%), Positives = 43/69 (63%), Gaps = 4/69 (5%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDW-ATKICELRKPVRL 59
M + VN + +VD T + A++ SL G+A ALN +V+PR+ W AT + E R+
Sbjct 1 MNISVNGESRQVDSSTVLDAVVRSLTAAPSGVAAALNETVVPRAQWPATALAEGD---RV 57
Query 60 EVVTAVQGG 68
EV+TAVQGG
Sbjct 58 EVLTAVQGG 66
>gi|343924499|ref|ZP_08764048.1| thiamine biosynthesis protein ThiS [Gordonia alkanivorans NBRC
16433]
gi|343765643|dbj|GAA10974.1| thiamine biosynthesis protein ThiS [Gordonia alkanivorans NBRC
16433]
Length=66
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (37%), Positives = 42/68 (62%), Gaps = 2/68 (2%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M + VN + ++V + ++ ++ LG DRGIAVA++ +V+PR W+ + +E
Sbjct 1 MTITVNGENLDVGDDESVKDVVTRLGLPDRGIAVAVDGAVVPRGRWSEHT--MTSGAVVE 58
Query 61 VVTAVQGG 68
+VTAVQGG
Sbjct 59 IVTAVQGG 66
>gi|167753746|ref|ZP_02425873.1| hypothetical protein ALIPUT_02028 [Alistipes putredinis DSM 17216]
gi|167658371|gb|EDS02501.1| hypothetical protein ALIPUT_02028 [Alistipes putredinis DSM 17216]
Length=66
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/68 (43%), Positives = 38/68 (56%), Gaps = 2/68 (2%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M V +N VE D TT+A LL G GIAVA+ V+PRS+W T L+ ++
Sbjct 1 MEVFINHSPVETDAATTLAELLMQEGIAADGIAVAIANKVVPRSEWPTT--RLQAGTKIT 58
Query 61 VVTAVQGG 68
V+ AV GG
Sbjct 59 VIRAVCGG 66
>gi|125973115|ref|YP_001037025.1| thiamine biosynthesis protein ThiS [Clostridium thermocellum
ATCC 27405]
gi|256003909|ref|ZP_05428895.1| thiamine biosynthesis protein ThiS [Clostridium thermocellum
DSM 2360]
gi|281417307|ref|ZP_06248327.1| thiamine biosynthesis protein ThiS [Clostridium thermocellum
JW20]
gi|125713340|gb|ABN51832.1| thiamine biosynthesis protein ThiS [Clostridium thermocellum
ATCC 27405]
gi|255992037|gb|EEU02133.1| thiamine biosynthesis protein ThiS [Clostridium thermocellum
DSM 2360]
gi|281408709|gb|EFB38967.1| thiamine biosynthesis protein ThiS [Clostridium thermocellum
JW20]
gi|316940659|gb|ADU74693.1| thiamine biosynthesis protein ThiS [Clostridium thermocellum
DSM 1313]
Length=66
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/68 (39%), Positives = 37/68 (55%), Gaps = 2/68 (2%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M + +N +Q EVD TT+ L+ S G I V N+ VLPR W + + L++ LE
Sbjct 1 MFITLNGKQTEVDNGTTLVGLIQSKGLEPESIVVEYNYEVLPREKWDSVV--LKENDNLE 58
Query 61 VVTAVQGG 68
V+ V GG
Sbjct 59 VLRFVGGG 66
>gi|300781787|ref|ZP_07091641.1| thiamine biosynthesis protein ThiS [Corynebacterium genitalium
ATCC 33030]
gi|300533494|gb|EFK54555.1| thiamine biosynthesis protein ThiS [Corynebacterium genitalium
ATCC 33030]
Length=66
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/68 (39%), Positives = 42/68 (62%), Gaps = 2/68 (2%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M ++VN++ V D L + LG +G AVA+N V+P+S+WAT++ E ++
Sbjct 1 MNLIVNDENVTTDTTDVQKLLEERLGEVPKGTAVAINGDVVPQSEWATRVLE--DGAHVD 58
Query 61 VVTAVQGG 68
++TAVQGG
Sbjct 59 ILTAVQGG 66
>gi|198282928|ref|YP_002219249.1| thiamine biosynthesis protein ThiS [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218666788|ref|YP_002425131.1| thiamine biosynthesis protein ThiS [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|198247449|gb|ACH83042.1| thiamine biosynthesis protein ThiS [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218519001|gb|ACK79587.1| thiamine biosynthesis protein ThiS [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|339834831|gb|EGQ62564.1| thiamine biosynthesis protein ThiS [Acidithiobacillus sp. GGI-221]
Length=66
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/68 (45%), Positives = 40/68 (59%), Gaps = 2/68 (2%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M ++VN EV EQ T+ ALL LG+ +R +AV N ++PRS AT L RLE
Sbjct 1 MQILVNGVAREVPEQITVRALLAELGWAERRVAVECNGEIVPRSTHATAT--LSAGDRLE 58
Query 61 VVTAVQGG 68
++ AV GG
Sbjct 59 IIQAVGGG 66
>gi|283779491|ref|YP_003370246.1| thiamine biosynthesis protein ThiS [Pirellula staleyi DSM 6068]
gi|283437944|gb|ADB16386.1| thiamine biosynthesis protein ThiS [Pirellula staleyi DSM 6068]
Length=67
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/66 (44%), Positives = 41/66 (63%), Gaps = 2/66 (3%)
Query 3 VVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLEVV 62
+VVN + E+ E T+A LL +L RG+AV +N ++PRS AT++ + RLEVV
Sbjct 4 IVVNGEDRELPEPCTLADLLTALSMPTRGVAVEVNEQIVPRSQHATRL--VTDGDRLEVV 61
Query 63 TAVQGG 68
T V GG
Sbjct 62 TLVGGG 67
>gi|72161447|ref|YP_289104.1| ThiS, thiamine-biosynthesis [Thermobifida fusca YX]
gi|71915179|gb|AAZ55081.1| ThiS, thiamine-biosynthesis [Thermobifida fusca YX]
Length=66
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/68 (37%), Positives = 43/68 (64%), Gaps = 2/68 (2%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M ++N + ++ TT+A ++ SL + G+AVA+N V+P++DWA + R++
Sbjct 1 MNAIINGEPRQLAPDTTVADVVRSLTRAESGVAVAVNDEVVPKTDWARTVVSPDD--RVD 58
Query 61 VVTAVQGG 68
V+TAVQGG
Sbjct 59 VLTAVQGG 66
>gi|255036220|ref|YP_003086841.1| thiamine biosynthesis protein ThiS [Dyadobacter fermentans DSM
18053]
gi|254948976|gb|ACT93676.1| thiamine biosynthesis protein ThiS [Dyadobacter fermentans DSM
18053]
Length=66
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/68 (37%), Positives = 41/68 (61%), Gaps = 2/68 (2%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M +++N Q +D T+ L+ L +GIAVA+N +V+P+SDW T+ L ++
Sbjct 1 MEIILNGQAKPIDAAYTVGQLVSELFPSGKGIAVAINQAVVPKSDWPTR--RLSPNDQVT 58
Query 61 VVTAVQGG 68
++TA QGG
Sbjct 59 LITATQGG 66
>gi|269127244|ref|YP_003300614.1| thiamine biosynthesis protein ThiS [Thermomonospora curvata DSM
43183]
gi|268312202|gb|ACY98576.1| thiamine biosynthesis protein ThiS [Thermomonospora curvata DSM
43183]
Length=66
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/68 (43%), Positives = 42/68 (62%), Gaps = 2/68 (2%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M V VN ++ E+ E TT+A ++ S+ G+AVA+N V+ R WA +R R+E
Sbjct 1 MKVTVNGRERELPEGTTVAEVVASVTAATTGVAVAVNGEVVSRGQWAD--TAVRDRDRVE 58
Query 61 VVTAVQGG 68
V+TAVQGG
Sbjct 59 VLTAVQGG 66
>gi|333030642|ref|ZP_08458703.1| thiamine biosynthesis protein ThiS [Bacteroides coprosuis DSM
18011]
gi|332741239|gb|EGJ71721.1| thiamine biosynthesis protein ThiS [Bacteroides coprosuis DSM
18011]
Length=66
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/68 (34%), Positives = 42/68 (62%), Gaps = 2/68 (2%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M +++N + VEV E ++++ L L +GIA+A+++ V+PR+ W +L + + L
Sbjct 1 MKIILNNKPVEVKEGSSLSDLASQLNLPAQGIAIAIDYKVIPRNMWVN--TKLEEDLELM 58
Query 61 VVTAVQGG 68
V+ AV GG
Sbjct 59 VIEAVSGG 66
>gi|333030644|ref|ZP_08458705.1| thiamine biosynthesis protein ThiS [Bacteroides coprosuis DSM
18011]
gi|332741241|gb|EGJ71723.1| thiamine biosynthesis protein ThiS [Bacteroides coprosuis DSM
18011]
Length=66
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/68 (37%), Positives = 39/68 (58%), Gaps = 2/68 (2%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
MIV++N++ EV E +++A L L +G+AVAL+ V+PR W + E + L
Sbjct 1 MIVIINDKPYEVKENSSVADLAKQLALPAQGVAVALDSHVIPRHIWHRTMLE--ENAELL 58
Query 61 VVTAVQGG 68
+ AV GG
Sbjct 59 IFQAVSGG 66
>gi|75676649|ref|YP_319070.1| ThiS, thiamine-biosynthesis [Nitrobacter winogradskyi Nb-255]
gi|74421519|gb|ABA05718.1| sulfur carrier protein ThiS [Nitrobacter winogradskyi Nb-255]
Length=65
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/68 (42%), Positives = 40/68 (59%), Gaps = 3/68 (4%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M V VN ++ E+ +T + ALL L + +A+A+NF VLPRS WA LR +E
Sbjct 1 MQVTVNGERREIAART-VDALLSELDYESTHVAIAVNFDVLPRSRWAD--TALRSGDEIE 57
Query 61 VVTAVQGG 68
++T QGG
Sbjct 58 IITPRQGG 65
>gi|291298439|ref|YP_003509717.1| thiamine biosynthesis protein ThiS [Stackebrandtia nassauensis
DSM 44728]
gi|290567659|gb|ADD40624.1| thiamine biosynthesis protein ThiS [Stackebrandtia nassauensis
DSM 44728]
Length=64
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/68 (42%), Positives = 43/68 (64%), Gaps = 4/68 (5%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M V +N + +++ +T+A + +L +RGIAVA+N V+PRS W K+ E R+E
Sbjct 1 MKVQLNGEPTDIN-GSTVADAVANLSRAERGIAVAVNGEVVPRSQWTRKLHEGD---RIE 56
Query 61 VVTAVQGG 68
V+TA QGG
Sbjct 57 VLTATQGG 64
>gi|296393653|ref|YP_003658537.1| thiamine biosynthesis protein ThiS [Segniliparus rotundus DSM
44985]
gi|296180800|gb|ADG97706.1| thiamine biosynthesis protein ThiS [Segniliparus rotundus DSM
44985]
Length=68
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/68 (36%), Positives = 41/68 (61%), Gaps = 3/68 (4%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
+++ N ++ E IA LL+ LG +G+A+A+N +V+PR +W + LR +E
Sbjct 4 ILITANGEEHVFPEGAVIADLLEKLGLSPKGVAIAVNGAVVPRGEWDQR---LRPGAIVE 60
Query 61 VVTAVQGG 68
++TAV GG
Sbjct 61 ILTAVPGG 68
>gi|344999142|ref|YP_004801996.1| thiamine biosynthesis protein ThiS [Streptomyces sp. SirexAA-E]
gi|344314768|gb|AEN09456.1| thiamine biosynthesis protein ThiS [Streptomyces sp. SirexAA-E]
Length=98
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/63 (43%), Positives = 38/63 (61%), Gaps = 2/63 (3%)
Query 6 NEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLEVVTAV 65
N + V T + AL+ SL G+A ALN +V+PRS W+ + L + R+EV+TAV
Sbjct 38 NGEHRSVPAGTALDALVASLTSAHSGVAAALNEAVVPRSQWSAAV--LAEGDRVEVLTAV 95
Query 66 QGG 68
QGG
Sbjct 96 QGG 98
>gi|302533980|ref|ZP_07286322.1| thiamine biosynthesis protein ThiS [Streptomyces sp. C]
gi|302442875|gb|EFL14691.1| thiamine biosynthesis protein ThiS [Streptomyces sp. C]
Length=66
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/69 (43%), Positives = 42/69 (61%), Gaps = 4/69 (5%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDW-ATKICELRKPVRL 59
M V VN + E+ TT+ A++ +L G+A ALN +V+PR W AT + E R+
Sbjct 1 MTVSVNGEPREIAAGTTLDAVVATLTTAPSGVAAALNETVVPRGQWPATPVDEGD---RI 57
Query 60 EVVTAVQGG 68
E++TAVQGG
Sbjct 58 EILTAVQGG 66
>gi|317506777|ref|ZP_07964555.1| thiamine biosynthesis protein ThiS [Segniliparus rugosus ATCC
BAA-974]
gi|316254924|gb|EFV14216.1| thiamine biosynthesis protein ThiS [Segniliparus rugosus ATCC
BAA-974]
Length=68
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/68 (40%), Positives = 39/68 (58%), Gaps = 3/68 (4%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
+++ VN ++ E IA LL +LG +GIAVA+N V PR +W LR +E
Sbjct 4 ILITVNGEERAFPEGAVIADLLAALGLSPKGIAVAVNGVVAPRGEWDQP---LRPGAVVE 60
Query 61 VVTAVQGG 68
++TAV GG
Sbjct 61 ILTAVPGG 68
>gi|302550823|ref|ZP_07303165.1| thiamine biosynthesis protein ThiS [Streptomyces viridochromogenes
DSM 40736]
gi|302468441|gb|EFL31534.1| thiamine biosynthesis protein ThiS [Streptomyces viridochromogenes
DSM 40736]
Length=66
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/68 (40%), Positives = 41/68 (61%), Gaps = 2/68 (2%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M + VN + +V T +A ++ SL G+A ALN +V+PR+ W + L + R+E
Sbjct 1 MNISVNGEPRDVRPGTALATVVSSLTTSPSGVAAALNETVVPRAQWPS--TPLAEGDRVE 58
Query 61 VVTAVQGG 68
V+TAVQGG
Sbjct 59 VLTAVQGG 66
>gi|324998505|ref|ZP_08119617.1| thiamine-biosynthesis [Pseudonocardia sp. P1]
Length=66
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/68 (40%), Positives = 43/68 (64%), Gaps = 2/68 (2%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M +V+N ++ E+D+ + LL G +RGIAVA++ V+PR+ A + + R+E
Sbjct 1 MRIVLNGEEREIDDGADLVRLLADAGMPERGIAVAVDGEVVPRAARAGFVPA--EGARIE 58
Query 61 VVTAVQGG 68
V+TAVQGG
Sbjct 59 VLTAVQGG 66
>gi|85715979|ref|ZP_01046956.1| ThiS, thiamine-biosynthesis [Nitrobacter sp. Nb-311A]
gi|85697177|gb|EAQ35058.1| ThiS, thiamine-biosynthesis [Nitrobacter sp. Nb-311A]
Length=65
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/68 (42%), Positives = 40/68 (59%), Gaps = 3/68 (4%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M V VN ++ EV QT + ALL L + +A+A+NF VLP+S WA L+ +E
Sbjct 1 MQVTVNGERREVMAQT-VDALLSELDYESTHVAIAVNFDVLPKSRWAD--TALKSGDEIE 57
Query 61 VVTAVQGG 68
++T QGG
Sbjct 58 IITPRQGG 65
>gi|308049742|ref|YP_003913308.1| thiamine biosynthesis protein ThiS [Ferrimonas balearica DSM
9799]
gi|307631932|gb|ADN76234.1| thiamine biosynthesis protein ThiS [Ferrimonas balearica DSM
9799]
Length=66
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (40%), Positives = 40/66 (61%), Gaps = 3/66 (4%)
Query 3 VVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLEVV 62
+++N Q + D TT+AALL SLG G+A+A+N V+PR W EL + RL++
Sbjct 4 IILNHQPHQTDA-TTLAALLASLGQDKPGVALAINGQVVPRRHWPE--TELNEGDRLDLF 60
Query 63 TAVQGG 68
+ + GG
Sbjct 61 SVIAGG 66
>gi|110636664|ref|YP_676871.1| thiamine biosynthesis sulfur transfer protein [Cytophaga hutchinsonii
ATCC 33406]
gi|110279345|gb|ABG57531.1| sulfur carrier protein ThiS [Cytophaga hutchinsonii ATCC 33406]
Length=67
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/69 (40%), Positives = 41/69 (60%), Gaps = 3/69 (4%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGF-GDRGIAVALNFSVLPRSDWATKICELRKPVRL 59
M V+VN + VE+ + I ALL L +GIA+A+N VLP+S+W + C L+ +
Sbjct 1 MNVIVNNKTVELPDAAGINALLAQLNITSPQGIAIAINEQVLPKSEWES--CTLKNNDAV 58
Query 60 EVVTAVQGG 68
++ A QGG
Sbjct 59 LLIRATQGG 67
>gi|226361318|ref|YP_002779096.1| thiamine biosynthesis protein ThiS [Rhodococcus opacus B4]
gi|226239803|dbj|BAH50151.1| putative thiamine biosynthesis protein ThiS [Rhodococcus opacus
B4]
Length=74
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (38%), Positives = 39/66 (60%), Gaps = 3/66 (4%)
Query 3 VVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLEVV 62
+ VN + E E T+ LL++L +GIAVA+N +V PR+ W + + +E++
Sbjct 12 ISVNGEDHEFTEPLTVTGLLEALNLPTKGIAVAVNGAVFPRARWDELVV---RGWEIEIL 68
Query 63 TAVQGG 68
TAVQGG
Sbjct 69 TAVQGG 74
>gi|317494909|ref|ZP_07953319.1| thiamine biosynthesis protein ThiS [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917097|gb|EFV38446.1| thiamine biosynthesis protein ThiS [Enterobacteriaceae bacterium
9_2_54FAA]
Length=66
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (37%), Positives = 43/68 (64%), Gaps = 2/68 (2%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M ++VN++ V + T++ +LL LG +G A+ALN ++LPR +WAT+ +L + +
Sbjct 1 MKIMVNDEYVTLSAATSVESLLLQLGRHQQGTALALNQTILPRENWATQ--QLAEGDEVV 58
Query 61 VVTAVQGG 68
V A+ GG
Sbjct 59 VFQAIAGG 66
>gi|27381767|ref|NP_773296.1| thiamin biosynthesis protein [Bradyrhizobium japonicum USDA 110]
gi|27354936|dbj|BAC51921.1| bsr6656 [Bradyrhizobium japonicum USDA 110]
Length=65
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (37%), Positives = 40/68 (59%), Gaps = 3/68 (4%)
Query 1 MIVVVNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLE 60
M+V++N +Q EV ++ ALL L + A+ALN+ V+P+S WA L+ +E
Sbjct 1 MLVIINGEQREV-ASVSVDALLSELDYEGTHFAIALNYDVVPKSRWAE--TSLKAGDEIE 57
Query 61 VVTAVQGG 68
++T QGG
Sbjct 58 IITPRQGG 65
>gi|334564779|ref|ZP_08517770.1| thiamine biosynthesis protein ThiS [Corynebacterium bovis DSM
20582]
Length=68
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (41%), Positives = 41/64 (65%), Gaps = 1/64 (1%)
Query 5 VNEQQVEVDEQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLEVVTA 64
VN ++ V+ TT+A L+ + RGIAVA++ VLPR W+ + +LR P ++++T
Sbjct 6 VNGEEHCVEPATTVAELVGGIVDSTRGIAVAVDGRVLPRDRWSETLGDLR-PESVDILTV 64
Query 65 VQGG 68
VQGG
Sbjct 65 VQGG 68
>gi|256371935|ref|YP_003109759.1| thiamine biosynthesis protein ThiS [Acidimicrobium ferrooxidans
DSM 10331]
gi|256008519|gb|ACU54086.1| thiamine biosynthesis protein ThiS [Acidimicrobium ferrooxidans
DSM 10331]
Length=68
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/55 (48%), Positives = 32/55 (59%), Gaps = 2/55 (3%)
Query 14 EQTTIAALLDSLGFGDRGIAVALNFSVLPRSDWATKICELRKPVRLEVVTAVQGG 68
E TT+A L L RG+A+A N + PRS W LR R+E+VTAVQGG
Sbjct 14 EATTLAELARELELPSRGVAIARNEEIAPRSTW--DAVALRDGDRIELVTAVQGG 66
Lambda K H
0.320 0.136 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129098386704
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40