BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0422c
Length=265
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607563|ref|NP_214936.1| phosphomethylpyrimidine kinase [Myc... 529 2e-148
gi|289441802|ref|ZP_06431546.1| phosphomethylpyrimidine kinase [... 528 3e-148
gi|253797346|ref|YP_003030347.1| phosphomethylpyrimidine kinase ... 528 3e-148
gi|340625447|ref|YP_004743899.1| putative phosphomethylpyrimidin... 466 1e-129
gi|118463606|ref|YP_883859.1| phosphomethylpyrimidine kinase [My... 428 3e-118
gi|254777171|ref|ZP_05218687.1| phosphomethylpyrimidine kinase [... 427 8e-118
gi|342859090|ref|ZP_08715744.1| bifunctional hydroxy-methylpyrim... 418 4e-115
gi|41410010|ref|NP_962846.1| phosphomethylpyrimidine kinase [Myc... 417 8e-115
gi|336460347|gb|EGO39247.1| phosphomethylpyrimidine kinase [Myco... 414 7e-114
gi|254818957|ref|ZP_05223958.1| phosphomethylpyrimidine kinase [... 407 8e-112
gi|296167895|ref|ZP_06850076.1| phosphomethylpyrimidine kinase [... 396 2e-108
gi|15827069|ref|NP_301332.1| phosphomethylpyrimidine kinase [Myc... 395 4e-108
gi|240168894|ref|ZP_04747553.1| phosphomethylpyrimidine kinase [... 392 3e-107
gi|183980758|ref|YP_001849049.1| phosphomethylpyrimidine kinase ... 392 3e-107
gi|108797544|ref|YP_637741.1| phosphomethylpyrimidine kinase [My... 379 3e-103
gi|118470193|ref|YP_885229.1| phosphomethylpyrimidine kinase [My... 373 2e-101
gi|118618878|ref|YP_907210.1| phosphomethylpyrimidine kinase [My... 372 3e-101
gi|169631275|ref|YP_001704924.1| phosphomethylpyrimidine kinase ... 371 6e-101
gi|145220786|ref|YP_001131464.1| phosphomethylpyrimidine kinase ... 350 2e-94
gi|120401739|ref|YP_951568.1| phosphomethylpyrimidine kinase [My... 342 2e-92
gi|333989034|ref|YP_004521648.1| phosphomethylpyrimidine kinase ... 340 1e-91
gi|325673948|ref|ZP_08153638.1| phosphomethylpyrimidine kinase [... 318 6e-85
gi|312141222|ref|YP_004008558.1| phosphomethylpyrimidine kinase/... 316 2e-84
gi|226304976|ref|YP_002764934.1| phosphomethylpyrimidine kinase ... 314 9e-84
gi|296141413|ref|YP_003648656.1| phosphomethylpyrimidine kinase ... 312 4e-83
gi|317506787|ref|ZP_07964564.1| phosphomethylpyrimidine kinase [... 311 6e-83
gi|343924276|ref|ZP_08763835.1| phosphomethylpyrimidine kinase [... 310 1e-82
gi|226361312|ref|YP_002779090.1| phosphomethylpyrimidine kinase ... 305 4e-81
gi|262200660|ref|YP_003271868.1| phosphomethylpyrimidine kinase ... 305 4e-81
gi|111019176|ref|YP_702148.1| phosphomethylpyrimidine kinase [Rh... 303 1e-80
gi|326383428|ref|ZP_08205115.1| bifunctional hydroxy-methylpyrim... 303 2e-80
gi|54027293|ref|YP_121535.1| phosphomethylpyrimidine kinase [Noc... 294 8e-78
gi|331699441|ref|YP_004335680.1| phosphomethylpyrimidine kinase ... 293 2e-77
gi|296393660|ref|YP_003658544.1| phosphomethylpyrimidine kinase ... 292 4e-77
gi|325002844|ref|ZP_08123956.1| phosphomethylpyrimidine kinase [... 291 7e-77
gi|333918221|ref|YP_004491802.1| phosphomethylpyrimidine kinase ... 289 3e-76
gi|300790378|ref|YP_003770669.1| phosphomethylpyrimidine kinase ... 269 3e-70
gi|296141412|ref|YP_003648655.1| phosphomethylpyrimidine kinase ... 267 1e-69
gi|257057416|ref|YP_003135248.1| phosphomethylpyrimidine kinase ... 266 2e-69
gi|257057417|ref|YP_003135249.1| phosphomethylpyrimidine kinase ... 265 5e-69
gi|256374577|ref|YP_003098237.1| phosphomethylpyrimidine kinase ... 264 8e-69
gi|300790380|ref|YP_003770671.1| phosphomethylpyrimidine kinase ... 263 3e-68
gi|302530618|ref|ZP_07282960.1| pyridoxal kinase [Streptomyces s... 258 7e-67
gi|302530621|ref|ZP_07282963.1| pyridoxal kinase [Streptomyces s... 253 2e-65
gi|134097121|ref|YP_001102782.1| phosphomethylpyrimidine kinase ... 252 5e-65
gi|221632426|ref|YP_002521647.1| phosphomethylpyrimidine kinase ... 229 3e-58
gi|219850028|ref|YP_002464461.1| phosphomethylpyrimidine kinase ... 226 4e-57
gi|288923492|ref|ZP_06417611.1| phosphomethylpyrimidine kinase [... 224 8e-57
gi|168041969|ref|XP_001773462.1| predicted protein [Physcomitrel... 223 3e-56
gi|254392470|ref|ZP_05007650.1| phosphomethylpyrimidine kinase [... 222 5e-56
>gi|15607563|ref|NP_214936.1| phosphomethylpyrimidine kinase [Mycobacterium tuberculosis H37Rv]
gi|15839809|ref|NP_334846.1| phosphomethylpyrimidine kinase [Mycobacterium tuberculosis CDC1551]
gi|31791600|ref|NP_854093.1| phosphomethylpyrimidine kinase [Mycobacterium bovis AF2122/97]
34 more sequence titles
Length=265
Score = 529 bits (1362), Expect = 2e-148, Method: Compositional matrix adjust.
Identities = 265/265 (100%), Positives = 265/265 (100%), Gaps = 0/265 (0%)
Query 1 MTPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVV 60
MTPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVV
Sbjct 1 MTPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVV 60
Query 61 AGQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAP 120
AGQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAP
Sbjct 61 AGQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAP 120
Query 121 SALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHL 180
SALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHL
Sbjct 121 SALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHL 180
Query 181 RSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRW 240
RSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRW
Sbjct 181 RSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRW 240
Query 241 VTECLRAAYPLGRGHGPVSPLFRLS 265
VTECLRAAYPLGRGHGPVSPLFRLS
Sbjct 241 VTECLRAAYPLGRGHGPVSPLFRLS 265
>gi|289441802|ref|ZP_06431546.1| phosphomethylpyrimidine kinase [Mycobacterium tuberculosis T46]
gi|289568338|ref|ZP_06448565.1| phosphomethylpyrimidine kinase thiD [Mycobacterium tuberculosis
T17]
gi|289748906|ref|ZP_06508284.1| phosphomethylpyrimidine kinase thiD [Mycobacterium tuberculosis
T92]
gi|289414721|gb|EFD11961.1| phosphomethylpyrimidine kinase [Mycobacterium tuberculosis T46]
gi|289542091|gb|EFD45740.1| phosphomethylpyrimidine kinase thiD [Mycobacterium tuberculosis
T17]
gi|289689493|gb|EFD56922.1| phosphomethylpyrimidine kinase thiD [Mycobacterium tuberculosis
T92]
Length=265
Score = 528 bits (1360), Expect = 3e-148, Method: Compositional matrix adjust.
Identities = 264/265 (99%), Positives = 265/265 (100%), Gaps = 0/265 (0%)
Query 1 MTPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVV 60
MTPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTA+TVQNTLGVKDIHEVPNDVV
Sbjct 1 MTPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAITVQNTLGVKDIHEVPNDVV 60
Query 61 AGQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAP 120
AGQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAP
Sbjct 61 AGQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAP 120
Query 121 SALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHL 180
SALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHL
Sbjct 121 SALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHL 180
Query 181 RSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRW 240
RSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRW
Sbjct 181 RSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRW 240
Query 241 VTECLRAAYPLGRGHGPVSPLFRLS 265
VTECLRAAYPLGRGHGPVSPLFRLS
Sbjct 241 VTECLRAAYPLGRGHGPVSPLFRLS 265
>gi|253797346|ref|YP_003030347.1| phosphomethylpyrimidine kinase thiD [Mycobacterium tuberculosis
KZN 1435]
gi|254230773|ref|ZP_04924100.1| phosphomethylpyrimidine kinase thiD [Mycobacterium tuberculosis
C]
gi|254363386|ref|ZP_04979432.1| phosphomethylpyrimidine kinase thiD [Mycobacterium tuberculosis
str. Haarlem]
39 more sequence titles
Length=275
Score = 528 bits (1360), Expect = 3e-148, Method: Compositional matrix adjust.
Identities = 265/265 (100%), Positives = 265/265 (100%), Gaps = 0/265 (0%)
Query 1 MTPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVV 60
MTPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVV
Sbjct 11 MTPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVV 70
Query 61 AGQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAP 120
AGQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAP
Sbjct 71 AGQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAP 130
Query 121 SALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHL 180
SALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHL
Sbjct 131 SALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHL 190
Query 181 RSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRW 240
RSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRW
Sbjct 191 RSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRW 250
Query 241 VTECLRAAYPLGRGHGPVSPLFRLS 265
VTECLRAAYPLGRGHGPVSPLFRLS
Sbjct 251 VTECLRAAYPLGRGHGPVSPLFRLS 275
>gi|340625447|ref|YP_004743899.1| putative phosphomethylpyrimidine kinase THID [Mycobacterium canettii
CIPT 140010059]
gi|340003637|emb|CCC42760.1| putative phosphomethylpyrimidine kinase THID (HMP-phosphate kinase)
(HMP-P kinase) [Mycobacterium canettii CIPT 140010059]
Length=265
Score = 466 bits (1199), Expect = 1e-129, Method: Compositional matrix adjust.
Identities = 255/265 (97%), Positives = 260/265 (99%), Gaps = 0/265 (0%)
Query 1 MTPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVV 60
MTPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGV DIHEVP+DVV
Sbjct 1 MTPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVTDIHEVPDDVV 60
Query 61 AGQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAP 120
AGQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRL+LSVPLVVDPVCASMHGDPLLAP
Sbjct 61 AGQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLKLSVPLVVDPVCASMHGDPLLAP 120
Query 121 SALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHL 180
SALDSLR QLFPLATLLTPNLDE RLLVDIEVVDAESQRAAAKALHALGP+WVLVKGGHL
Sbjct 121 SALDSLRSQLFPLATLLTPNLDETRLLVDIEVVDAESQRAAAKALHALGPRWVLVKGGHL 180
Query 181 RSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRW 240
RSS+ SCDLLYDGV+CYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTV DAVDFGKRW
Sbjct 181 RSSERSCDLLYDGVNCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVTDAVDFGKRW 240
Query 241 VTECLRAAYPLGRGHGPVSPLFRLS 265
VTECLRAAYPLGRGHGPVSPLFRLS
Sbjct 241 VTECLRAAYPLGRGHGPVSPLFRLS 265
>gi|118463606|ref|YP_883859.1| phosphomethylpyrimidine kinase [Mycobacterium avium 104]
gi|118164893|gb|ABK65790.1| phosphomethylpyrimidine kinase [Mycobacterium avium 104]
Length=282
Score = 428 bits (1101), Expect = 3e-118, Method: Compositional matrix adjust.
Identities = 226/264 (86%), Positives = 238/264 (91%), Gaps = 0/264 (0%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP RVLSIAGSDSGGGAGIQAD+RTMA+LGVHACVAVTAVT QNTLGV HEVP DVVA
Sbjct 16 TPRRVLSIAGSDSGGGAGIQADLRTMAMLGVHACVAVTAVTAQNTLGVNSFHEVPADVVA 75
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAPS 121
GQIEAV DIG+QAAKTGMLASS I+A VAATWRRL LSVPLVVDPVCASMHGDPLLA
Sbjct 76 GQIEAVAGDIGIQAAKTGMLASSPIIAEVAATWRRLGLSVPLVVDPVCASMHGDPLLAAD 135
Query 122 ALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHLR 181
ALD+LRGQLFPLATL+TPNLDE RLLVDI+V DA SQR AAKALHALGPQWVLVKGGHLR
Sbjct 136 ALDTLRGQLFPLATLVTPNLDEVRLLVDIDVTDAASQRDAAKALHALGPQWVLVKGGHLR 195
Query 182 SSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRWV 241
SS SCDLLYDG SCY+FDA RL TG+DHGGGDTLA+A+A ALAHGFTVPDAV FGKRWV
Sbjct 196 SSQRSCDLLYDGDSCYEFDAHRLNTGNDHGGGDTLASAVACALAHGFTVPDAVAFGKRWV 255
Query 242 TECLRAAYPLGRGHGPVSPLFRLS 265
TECLRA+YPLG GHGPVS LFRLS
Sbjct 256 TECLRASYPLGHGHGPVSALFRLS 279
>gi|254777171|ref|ZP_05218687.1| phosphomethylpyrimidine kinase [Mycobacterium avium subsp. avium
ATCC 25291]
Length=282
Score = 427 bits (1098), Expect = 8e-118, Method: Compositional matrix adjust.
Identities = 226/264 (86%), Positives = 238/264 (91%), Gaps = 0/264 (0%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP RVLSIAGSDSGGGAGIQAD+RTMA+LGVHACVAVTAVTVQNTLGV HEVP DVVA
Sbjct 16 TPRRVLSIAGSDSGGGAGIQADLRTMAMLGVHACVAVTAVTVQNTLGVNSFHEVPADVVA 75
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAPS 121
GQIEAV DIG+QAAKTGMLASS I+A VAATWRRL LSVPLVVDPVCASMHGDPLLA
Sbjct 76 GQIEAVAGDIGIQAAKTGMLASSPIIAEVAATWRRLGLSVPLVVDPVCASMHGDPLLAAD 135
Query 122 ALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHLR 181
ALD+LRGQLFPLATL+TPNLDE RLLVDI+V DA SQR AAKALHALG QWVLVKGGHLR
Sbjct 136 ALDTLRGQLFPLATLVTPNLDEVRLLVDIDVTDAASQRDAAKALHALGSQWVLVKGGHLR 195
Query 182 SSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRWV 241
SS SCDLLYDG SCY+FDA RL TG+DHGGGDTLA+A+A ALAHGFTVPDAV FGKRWV
Sbjct 196 SSQRSCDLLYDGDSCYEFDAHRLATGNDHGGGDTLASAVACALAHGFTVPDAVAFGKRWV 255
Query 242 TECLRAAYPLGRGHGPVSPLFRLS 265
TECLRA+YPLG GHGPVS LFRLS
Sbjct 256 TECLRASYPLGHGHGPVSALFRLS 279
>gi|342859090|ref|ZP_08715744.1| bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine
kinase [Mycobacterium colombiense CECT 3035]
gi|342133331|gb|EGT86534.1| bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine
kinase [Mycobacterium colombiense CECT 3035]
Length=275
Score = 418 bits (1075), Expect = 4e-115, Method: Compositional matrix adjust.
Identities = 220/264 (84%), Positives = 240/264 (91%), Gaps = 0/264 (0%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP RVLSIAGSDSGGGAGI+ADMRTMALLGVHACV+VTAVTVQNTLGV+ HEVP+DVVA
Sbjct 12 TPRRVLSIAGSDSGGGAGIEADMRTMALLGVHACVSVTAVTVQNTLGVQSFHEVPDDVVA 71
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAPS 121
GQIEAV DIG+QAAKTGMLAS RI+ TVA TWRRL L+VPLVVDPV ASMHGD L+AP+
Sbjct 72 GQIEAVAGDIGIQAAKTGMLASPRIIDTVAGTWRRLGLTVPLVVDPVAASMHGDALMAPA 131
Query 122 ALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHLR 181
ALDSLR QLFPLATL+TPNLDE RLLVDI+VVD SQRAAAKALHALGP+WVLVKGGHLR
Sbjct 132 ALDSLRDQLFPLATLVTPNLDEVRLLVDIDVVDPASQRAAAKALHALGPRWVLVKGGHLR 191
Query 182 SSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRWV 241
SSD SCDLLYDG ++FDA+R+ TG+DHGGGDTLA+A+A ALAH F+VPDAV FGKRWV
Sbjct 192 SSDRSCDLLYDGADFHEFDAERVATGNDHGGGDTLASAVACALAHDFSVPDAVAFGKRWV 251
Query 242 TECLRAAYPLGRGHGPVSPLFRLS 265
TECLRAAYPLG GHGPVSPLFRLS
Sbjct 252 TECLRAAYPLGHGHGPVSPLFRLS 275
>gi|41410010|ref|NP_962846.1| phosphomethylpyrimidine kinase [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398843|gb|AAS06462.1| ThiD [Mycobacterium avium subsp. paratuberculosis K-10]
Length=282
Score = 417 bits (1072), Expect = 8e-115, Method: Compositional matrix adjust.
Identities = 229/264 (87%), Positives = 241/264 (92%), Gaps = 0/264 (0%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP RVLSIAGSDSGGGAGIQAD+RTMA+LGVHACVAVTAVTVQNTLGV HEVP DVVA
Sbjct 16 TPRRVLSIAGSDSGGGAGIQADLRTMAMLGVHACVAVTAVTVQNTLGVNSFHEVPADVVA 75
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAPS 121
GQIEAV DIG+QAAKTGMLASS I+A VAATWRRLELSVPLVVDPVCASMHGDPLLA
Sbjct 76 GQIEAVAGDIGIQAAKTGMLASSPIIAEVAATWRRLELSVPLVVDPVCASMHGDPLLAAD 135
Query 122 ALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHLR 181
ALD+LRGQLFPLATL+TPNLDE RLLVDI+V DA SQRAAAKALHALGPQWVLVKGGHLR
Sbjct 136 ALDTLRGQLFPLATLVTPNLDEVRLLVDIDVTDAASQRAAAKALHALGPQWVLVKGGHLR 195
Query 182 SSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRWV 241
SS SCDLLYDG SCY+FDA RL TG+DHGGGDTLA+A+A ALAHGFTVPDAV FGKRWV
Sbjct 196 SSQRSCDLLYDGDSCYEFDAHRLATGNDHGGGDTLASAVACALAHGFTVPDAVAFGKRWV 255
Query 242 TECLRAAYPLGRGHGPVSPLFRLS 265
TECLRA+YPLG GHGPVS LFRLS
Sbjct 256 TECLRASYPLGHGHGPVSALFRLS 279
>gi|336460347|gb|EGO39247.1| phosphomethylpyrimidine kinase [Mycobacterium avium subsp. paratuberculosis
S397]
Length=282
Score = 414 bits (1064), Expect = 7e-114, Method: Compositional matrix adjust.
Identities = 228/264 (87%), Positives = 240/264 (91%), Gaps = 0/264 (0%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP RVLSIAGSDSGGGAGIQAD+RTMA+LGVHACVAVTAVTVQNTLGV HEVP DVVA
Sbjct 16 TPRRVLSIAGSDSGGGAGIQADLRTMAMLGVHACVAVTAVTVQNTLGVNSFHEVPADVVA 75
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAPS 121
QIEAV DIG+QAAKTGMLASS I+A VAATWRRLELSVPLVVDPVCASMHGDPLLA
Sbjct 76 RQIEAVAGDIGIQAAKTGMLASSPIIAEVAATWRRLELSVPLVVDPVCASMHGDPLLAAD 135
Query 122 ALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHLR 181
ALD+LRGQLFPLATL+TPNLDE RLLVDI+V DA SQRAAAKALHALGPQWVLVKGGHLR
Sbjct 136 ALDTLRGQLFPLATLVTPNLDEVRLLVDIDVTDAASQRAAAKALHALGPQWVLVKGGHLR 195
Query 182 SSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRWV 241
SS SCDLLYDG SCY+FDA RL TG+DHGGGDTLA+A+A ALAHGFTVPDAV FGKRWV
Sbjct 196 SSQRSCDLLYDGDSCYEFDAHRLATGNDHGGGDTLASAVACALAHGFTVPDAVAFGKRWV 255
Query 242 TECLRAAYPLGRGHGPVSPLFRLS 265
TECLRA+YPLG GHGPVS LFRLS
Sbjct 256 TECLRASYPLGHGHGPVSALFRLS 279
>gi|254818957|ref|ZP_05223958.1| phosphomethylpyrimidine kinase [Mycobacterium intracellulare
ATCC 13950]
Length=275
Score = 407 bits (1046), Expect = 8e-112, Method: Compositional matrix adjust.
Identities = 221/264 (84%), Positives = 240/264 (91%), Gaps = 0/264 (0%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP RVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNT+GVK HE+P+DVVA
Sbjct 12 TPLRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTVGVKSFHEIPDDVVA 71
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAPS 121
GQIEAVV DIG+QAAKTGMLAS RI+ TVA TWRRL L+VPLVVDPV ASMHGD L+AP+
Sbjct 72 GQIEAVVGDIGIQAAKTGMLASPRIIDTVATTWRRLGLTVPLVVDPVAASMHGDALMAPA 131
Query 122 ALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHLR 181
ALDSLR QLFPLATL+TPNLDE RLLVDI+VVD SQRAAAKALHALGP+WVLVKGGHLR
Sbjct 132 ALDSLRNQLFPLATLVTPNLDEVRLLVDIDVVDPASQRAAAKALHALGPRWVLVKGGHLR 191
Query 182 SSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRWV 241
SSD SCDLLYDG S ++FDA+R+ TG+DHGGGDTLA+A A ALAHG TVP+AV FGKRWV
Sbjct 192 SSDRSCDLLYDGTSYHEFDAERIATGNDHGGGDTLASAAACALAHGLTVPEAVGFGKRWV 251
Query 242 TECLRAAYPLGRGHGPVSPLFRLS 265
TE LRA+YPLG GHGPVSPLFRLS
Sbjct 252 TESLRASYPLGHGHGPVSPLFRLS 275
>gi|296167895|ref|ZP_06850076.1| phosphomethylpyrimidine kinase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896953|gb|EFG76578.1| phosphomethylpyrimidine kinase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=275
Score = 396 bits (1017), Expect = 2e-108, Method: Compositional matrix adjust.
Identities = 227/264 (86%), Positives = 241/264 (92%), Gaps = 0/264 (0%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP RVLSIAGSDSGGGAGIQADMRTMALLGVHACVAV+AVTVQNTLGVK HEVP VVA
Sbjct 12 TPARVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVSAVTVQNTLGVKGFHEVPAGVVA 71
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAPS 121
QIEAVVTDIGVQAAKTGMLASS I+A VA TWRRL L+VPLVVDPVCASMHGD LLA S
Sbjct 72 DQIEAVVTDIGVQAAKTGMLASSAIIAAVADTWRRLGLTVPLVVDPVCASMHGDALLAES 131
Query 122 ALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHLR 181
ALDSLRGQLFPLATL+TPNLDE RLLV I+VVDAESQRAAA+ALHALGP+W LVKGGHLR
Sbjct 132 ALDSLRGQLFPLATLVTPNLDEVRLLVGIDVVDAESQRAAAEALHALGPRWALVKGGHLR 191
Query 182 SSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRWV 241
SSD SCDLLYDG + ++FD++RLP G+DHGGGDTLA AIA ALAHGFTVPDAV FGKRWV
Sbjct 192 SSDRSCDLLYDGAAWHEFDSERLPGGNDHGGGDTLAAAIACALAHGFTVPDAVGFGKRWV 251
Query 242 TECLRAAYPLGRGHGPVSPLFRLS 265
TECLRA+YPLG GHGPVSPLFRLS
Sbjct 252 TECLRASYPLGHGHGPVSPLFRLS 275
>gi|15827069|ref|NP_301332.1| phosphomethylpyrimidine kinase [Mycobacterium leprae TN]
gi|221229547|ref|YP_002502963.1| phosphomethylpyrimidine kinase [Mycobacterium leprae Br4923]
gi|7388314|sp|Q9ZBL1.1|THID_MYCLE RecName: Full=Hydroxymethylpyrimidine/phosphomethylpyrimidine
kinase; AltName: Full=Hydroxymethylpyrimidine kinase; Short=HMP
kinase; AltName: Full=Hydroxymethylpyrimidine phosphate
kinase; Short=HMP-P kinase; Short=HMP-phosphate kinase; Short=HMPP
kinase
gi|4154057|emb|CAA22711.1| putative phosphomethylpyrimidine kinase ThiD [Mycobacterium leprae]
gi|13092617|emb|CAC29803.1| putative phosphomethylpyrimidine kinase [Mycobacterium leprae]
gi|219932654|emb|CAR70388.1| putative phosphomethylpyrimidine kinase [Mycobacterium leprae
Br4923]
Length=279
Score = 395 bits (1014), Expect = 4e-108, Method: Compositional matrix adjust.
Identities = 207/266 (78%), Positives = 232/266 (88%), Gaps = 4/266 (1%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP RVLSIAGSDSGGGAGIQADMRTM +LGVHAC AVTAVT+QNTLGV+ HE+P ++VA
Sbjct 12 TPLRVLSIAGSDSGGGAGIQADMRTMTVLGVHACTAVTAVTIQNTLGVEGFHEIPAEIVA 71
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAPS 121
QI+AVVTDIG+Q+AKTGMLASS I+A VA TW RLEL+ PLVVDPVCASMHGDPLL
Sbjct 72 SQIKAVVTDIGIQSAKTGMLASSSIIAAVAETWLRLELTTPLVVDPVCASMHGDPLLTGE 131
Query 122 ALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHLR 181
A+DSLR +LFPLAT++TPNLDE RLLV I+VVD ESQRAAA ALHALGPQW LVKGGHLR
Sbjct 132 AMDSLRDRLFPLATVVTPNLDEVRLLVGIDVVDTESQRAAAMALHALGPQWALVKGGHLR 191
Query 182 SSDGSCDLLYD----GVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFG 237
SSD SCDLLY GV+ ++FDA R+ TG+DHGGGDTLA A++ ALAHG+TVPDAV FG
Sbjct 192 SSDRSCDLLYGGSSAGVAFHEFDAPRVQTGNDHGGGDTLAAAVSCALAHGYTVPDAVGFG 251
Query 238 KRWVTECLRAAYPLGRGHGPVSPLFR 263
KRWVTECLR AYPLGRGHGPVSPLF+
Sbjct 252 KRWVTECLRDAYPLGRGHGPVSPLFQ 277
>gi|240168894|ref|ZP_04747553.1| phosphomethylpyrimidine kinase [Mycobacterium kansasii ATCC 12478]
Length=270
Score = 392 bits (1007), Expect = 3e-107, Method: Compositional matrix adjust.
Identities = 222/264 (85%), Positives = 238/264 (91%), Gaps = 0/264 (0%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP RVL+IAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVK HEVP DVV
Sbjct 7 TPLRVLTIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKSFHEVPADVVV 66
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAPS 121
GQ+EAVV DIG+QAAKTGMLASSRI++ VAATWRRLEL VPLVVDPVC SMHG+PLLA S
Sbjct 67 GQVEAVVNDIGIQAAKTGMLASSRIISAVAATWRRLELGVPLVVDPVCVSMHGNPLLAAS 126
Query 122 ALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHLR 181
LDSLR +LFPLATL+TPNLDE RLLVDI+VVD ESQRAAAKALHALGP+W LVKGGHLR
Sbjct 127 DLDSLRAELFPLATLVTPNLDEVRLLVDIDVVDGESQRAAAKALHALGPRWALVKGGHLR 186
Query 182 SSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRWV 241
SS+ SCDLLY G ++FDA R+ TG+DHGGGDTLA A+A ALAHGFTVPDAV FGKRWV
Sbjct 187 SSERSCDLLYGGADFHEFDAARVSTGNDHGGGDTLAAAVACALAHGFTVPDAVAFGKRWV 246
Query 242 TECLRAAYPLGRGHGPVSPLFRLS 265
TECLRAAYPLG GHGPVSPLFRLS
Sbjct 247 TECLRAAYPLGAGHGPVSPLFRLS 270
>gi|183980758|ref|YP_001849049.1| phosphomethylpyrimidine kinase ThiD [Mycobacterium marinum M]
gi|183174084|gb|ACC39194.1| phosphomethylpyrimidine kinase ThiD [Mycobacterium marinum M]
Length=275
Score = 392 bits (1007), Expect = 3e-107, Method: Compositional matrix adjust.
Identities = 213/264 (81%), Positives = 232/264 (88%), Gaps = 0/264 (0%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP R L+IAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVK HE P DVVA
Sbjct 12 TPLRALTIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKGFHETPEDVVA 71
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAPS 121
GQI AVV DIG+QAAKTGMLAS RI+ VAATWR+LE++VPLVVDPVCASMHGD LLA S
Sbjct 72 GQITAVVEDIGIQAAKTGMLASPRIIDAVAATWRQLEVAVPLVVDPVCASMHGDALLAAS 131
Query 122 ALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHLR 181
L+SLR QLFPLATL+TPNLDE RLLV I+V+D +SQ AAA+ALH LGP+WVLVKGGHLR
Sbjct 132 GLESLREQLFPLATLVTPNLDEVRLLVGIDVIDTQSQHAAARALHGLGPRWVLVKGGHLR 191
Query 182 SSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRWV 241
SS SCDLLYDG ++FDA R+ TG+DHGGGDTLA A A ALAHGFTVPDAV F K+WV
Sbjct 192 SSTRSCDLLYDGTDFFEFDAPRVATGNDHGGGDTLAAATACALAHGFTVPDAVSFAKKWV 251
Query 242 TECLRAAYPLGRGHGPVSPLFRLS 265
TEC+RAAYPLGRGHGPVSPLFRLS
Sbjct 252 TECIRAAYPLGRGHGPVSPLFRLS 275
>gi|108797544|ref|YP_637741.1| phosphomethylpyrimidine kinase [Mycobacterium sp. MCS]
gi|119866630|ref|YP_936582.1| phosphomethylpyrimidine kinase [Mycobacterium sp. KMS]
gi|126433166|ref|YP_001068857.1| phosphomethylpyrimidine kinase [Mycobacterium sp. JLS]
gi|108767963|gb|ABG06685.1| Phosphomethylpyrimidine kinase type-2 [Mycobacterium sp. MCS]
gi|119692719|gb|ABL89792.1| phosphomethylpyrimidine kinase [Mycobacterium sp. KMS]
gi|126232966|gb|ABN96366.1| phosphomethylpyrimidine kinase [Mycobacterium sp. JLS]
Length=282
Score = 379 bits (973), Expect = 3e-103, Method: Compositional matrix adjust.
Identities = 196/264 (75%), Positives = 221/264 (84%), Gaps = 1/264 (0%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP RV++IAG+DSGGGAGIQAD RT A+LGVH CVAV AVTVQN++GVK HE+P DV+
Sbjct 15 TPARVMTIAGTDSGGGAGIQADSRTFAMLGVHGCVAVVAVTVQNSVGVKGFHEIPIDVIT 74
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAPS 121
GQIEAVV+DIG+QAAKTGMLASS I+ VA TWRRL PLVVDPVCASMHGDPLL PS
Sbjct 75 GQIEAVVSDIGIQAAKTGMLASSEIITAVAETWRRLR-PAPLVVDPVCASMHGDPLLHPS 133
Query 122 ALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHLR 181
ALD+LR +LFPLATL+TPNLDE RL+ I+V DA SQR AA+ALHALGPQW LVKGGHLR
Sbjct 134 ALDALRSELFPLATLVTPNLDEVRLITGIDVTDAASQRDAARALHALGPQWALVKGGHLR 193
Query 182 SSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRWV 241
SS S DLL+DG ++F A R+ TG DHG GDTLA A A+ALAHG++VPDAV F K+WV
Sbjct 194 SSAYSPDLLFDGSEFHEFGADRIDTGHDHGAGDTLAAATASALAHGYSVPDAVAFAKQWV 253
Query 242 TECLRAAYPLGRGHGPVSPLFRLS 265
TECLRAAYPLG GHGPVS LFRLS
Sbjct 254 TECLRAAYPLGHGHGPVSALFRLS 277
>gi|118470193|ref|YP_885229.1| phosphomethylpyrimidine kinase [Mycobacterium smegmatis str.
MC2 155]
gi|118171480|gb|ABK72376.1| phosphomethylpyrimidine kinase [Mycobacterium smegmatis str.
MC2 155]
Length=278
Score = 373 bits (958), Expect = 2e-101, Method: Compositional matrix adjust.
Identities = 188/263 (72%), Positives = 215/263 (82%), Gaps = 0/263 (0%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP RV++IAG+DSGGGAGIQAD+RT A+LGVH CVAV AVTVQN++GVK HEVP D++A
Sbjct 12 TPTRVMTIAGTDSGGGAGIQADLRTFAMLGVHGCVAVAAVTVQNSVGVKGFHEVPVDIIA 71
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAPS 121
GQI+ V DIG+QAAKTGMLAS+ I+ VA TWR L PLVVDPVCASMHGDPLL PS
Sbjct 72 GQIQVVAEDIGIQAAKTGMLASAEIIGAVAETWRGLGTEAPLVVDPVCASMHGDPLLHPS 131
Query 122 ALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHLR 181
ALDS+R +LFP+A+L+TPNLDE RL+ IEVVD +QR AAKALHALGP+W LVKGGHLR
Sbjct 132 ALDSVRNELFPIASLVTPNLDEVRLITGIEVVDEATQRDAAKALHALGPKWALVKGGHLR 191
Query 182 SSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRWV 241
+S S DLLY+G Y+F A+R+ TG DHG GDTLA A A ALAHG +PDAV F K WV
Sbjct 192 TSAQSPDLLYNGTDFYEFGAERIDTGHDHGAGDTLAAAAACALAHGMDMPDAVAFAKGWV 251
Query 242 TECLRAAYPLGRGHGPVSPLFRL 264
TECLRAAYPLG GHGPVS LFRL
Sbjct 252 TECLRAAYPLGHGHGPVSALFRL 274
>gi|118618878|ref|YP_907210.1| phosphomethylpyrimidine kinase [Mycobacterium ulcerans Agy99]
gi|118570988|gb|ABL05739.1| phosphomethylpyrimidine kinase ThiD [Mycobacterium ulcerans Agy99]
Length=275
Score = 372 bits (955), Expect = 3e-101, Method: Compositional matrix adjust.
Identities = 212/264 (81%), Positives = 231/264 (88%), Gaps = 0/264 (0%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP R L+IAGSDSGGGAGIQADMRTMALLGVHACV VTAVTVQNTLGVK HE P DVVA
Sbjct 12 TPLRALTIAGSDSGGGAGIQADMRTMALLGVHACVVVTAVTVQNTLGVKGFHETPEDVVA 71
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAPS 121
GQI AVV DIG+QAAKTGMLAS RI+ VAATWR+LE++VPLVVDPVCASMHGD LLA S
Sbjct 72 GQITAVVEDIGIQAAKTGMLASPRIIDAVAATWRQLEVTVPLVVDPVCASMHGDALLAAS 131
Query 122 ALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHLR 181
L+SLR QLFPLATL+TPNLDE RLLV I+V+D +SQ AAA+ALH LGP+WVLVKGGHLR
Sbjct 132 GLESLREQLFPLATLVTPNLDEVRLLVGIDVIDTQSQHAAARALHGLGPRWVLVKGGHLR 191
Query 182 SSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRWV 241
SS SCDLLYDG ++FDA R+ TG+DHGGGDTLA A A ALAHGFTVPDAV F K+WV
Sbjct 192 SSTRSCDLLYDGTDFFEFDAPRVATGNDHGGGDTLAAATACALAHGFTVPDAVSFAKKWV 251
Query 242 TECLRAAYPLGRGHGPVSPLFRLS 265
TEC+RAAYPLGRGHGPVSPLFRLS
Sbjct 252 TECIRAAYPLGRGHGPVSPLFRLS 275
>gi|169631275|ref|YP_001704924.1| phosphomethylpyrimidine kinase [Mycobacterium abscessus ATCC
19977]
gi|169243242|emb|CAM64270.1| Phosphomethylpyrimidine kinase (ThiD) [Mycobacterium abscessus]
Length=278
Score = 371 bits (952), Expect = 6e-101, Method: Compositional matrix adjust.
Identities = 191/263 (73%), Positives = 221/263 (85%), Gaps = 0/263 (0%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP R ++IAGSDSGGGAGIQADMRTMALLGVH CVAVTAVTVQN+LGVKD HE+P +VA
Sbjct 14 TPVRAMTIAGSDSGGGAGIQADMRTMALLGVHGCVAVTAVTVQNSLGVKDFHEIPPPIVA 73
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAPS 121
Q+E V+TDIG+QAAKTGMLAS+ I+ ++ +W L SVPLVVDPVCASMHGDPLL PS
Sbjct 74 AQMEVVITDIGIQAAKTGMLASAPIIEAISESWSNLAPSVPLVVDPVCASMHGDPLLHPS 133
Query 122 ALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHLR 181
ALD+LR +LFPLATL+TPNLDE RLLVDI+VVD +SQ+ AA+ LHALGPQW LVKGGHLR
Sbjct 134 ALDALRTRLFPLATLVTPNLDEVRLLVDIDVVDEDSQKEAARKLHALGPQWALVKGGHLR 193
Query 182 SSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRWV 241
SSD S DLL+DG + F +R+ TG DHG GDTLA +I+ ALAHG V +AV FGK+W+
Sbjct 194 SSDTSTDLLFDGTEFHYFPVERVDTGHDHGAGDTLAASISCALAHGLPVTEAVAFGKQWI 253
Query 242 TECLRAAYPLGRGHGPVSPLFRL 264
TECL+AAYPLG GHGPVS LFRL
Sbjct 254 TECLKAAYPLGHGHGPVSALFRL 276
>gi|145220786|ref|YP_001131464.1| phosphomethylpyrimidine kinase [Mycobacterium gilvum PYR-GCK]
gi|315442260|ref|YP_004075139.1| phosphomethylpyrimidine kinase [Mycobacterium sp. Spyr1]
gi|145213272|gb|ABP42676.1| phosphomethylpyrimidine kinase [Mycobacterium gilvum PYR-GCK]
gi|315260563|gb|ADT97304.1| phosphomethylpyrimidine kinase [Mycobacterium sp. Spyr1]
Length=287
Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 194/266 (73%), Positives = 225/266 (85%), Gaps = 2/266 (0%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP RVL+IAGSDSGGGAGIQADMRT ALLGVH+ VAVTAVTVQN+LGVK HE+P DV+A
Sbjct 21 TPLRVLTIAGSDSGGGAGIQADMRTFALLGVHSLVAVTAVTVQNSLGVKGFHEIPLDVIA 80
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATW--RRLELSVPLVVDPVCASMHGDPLLA 119
GQIEAV +DIG+QAAKTGMLASS I+ T+A TW + L +VPL+VDPVCASMHGDPLL
Sbjct 81 GQIEAVASDIGLQAAKTGMLASSEIIETIADTWVAQGLSGTVPLIVDPVCASMHGDPLLH 140
Query 120 PSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGH 179
PSAL++L+ +LFPLATL+TPNLDE LL IEVVD +SQR AA+ALHALGP W LVKGGH
Sbjct 141 PSALNALKEKLFPLATLVTPNLDEVGLLTGIEVVDEDSQRDAARALHALGPSWALVKGGH 200
Query 180 LRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKR 239
LRSS S DLL+DG ++FD+ R+ T DHG GDTLA A A+ALAHG++VPDAV F KR
Sbjct 201 LRSSAQSPDLLFDGTDFHRFDSTRIDTTHDHGAGDTLAAATASALAHGYSVPDAVAFAKR 260
Query 240 WVTECLRAAYPLGRGHGPVSPLFRLS 265
WVTEC+R+AYPLG+GHGPVS LFRL+
Sbjct 261 WVTECIRSAYPLGQGHGPVSALFRLA 286
>gi|120401739|ref|YP_951568.1| phosphomethylpyrimidine kinase [Mycobacterium vanbaalenii PYR-1]
gi|119954557|gb|ABM11562.1| phosphomethylpyrimidine kinase [Mycobacterium vanbaalenii PYR-1]
Length=278
Score = 342 bits (878), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 203/266 (77%), Positives = 226/266 (85%), Gaps = 2/266 (0%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP RV++IAGSDSGGGAGIQADMRT ALLG+H VAVTAVTVQN++GVK HE+P DVVA
Sbjct 12 TPLRVMTIAGSDSGGGAGIQADMRTFALLGLHGLVAVTAVTVQNSVGVKGFHEIPLDVVA 71
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATW--RRLELSVPLVVDPVCASMHGDPLLA 119
GQIEAV +DIG+QAAKTGMLASS I+ T+A TW + L SVPLVVDPVCASMHGDPLL
Sbjct 72 GQIEAVASDIGLQAAKTGMLASSEIIETIADTWVAQGLHGSVPLVVDPVCASMHGDPLLH 131
Query 120 PSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGH 179
PSAL++LR +LFPLATL+TPNLDE RLLVDI+VVD ESQRAAA+ALHALGPQW LVKGGH
Sbjct 132 PSALNALRDKLFPLATLVTPNLDEVRLLVDIDVVDEESQRAAARALHALGPQWALVKGGH 191
Query 180 LRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKR 239
LRSS S DLL+DG + FD+ R+ T DHG GDTLA AIA ALAHG+ VPDAV FGK
Sbjct 192 LRSSSHSPDLLFDGTDFHAFDSTRIDTVHDHGAGDTLAAAIACALAHGYPVPDAVAFGKH 251
Query 240 WVTECLRAAYPLGRGHGPVSPLFRLS 265
WVTECLRAAYPLG GHGPVS LFRL+
Sbjct 252 WVTECLRAAYPLGHGHGPVSALFRLT 277
>gi|333989034|ref|YP_004521648.1| phosphomethylpyrimidine kinase ThiD [Mycobacterium sp. JDM601]
gi|333485002|gb|AEF34394.1| phosphomethylpyrimidine kinase ThiD [Mycobacterium sp. JDM601]
Length=276
Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 197/261 (76%), Positives = 217/261 (84%), Gaps = 0/261 (0%)
Query 5 RVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVAGQI 64
RVL+IAGSDSGGGAGIQADMRT A+LGVHACVAVTAVTVQNT+GVK HEVP D VA QI
Sbjct 15 RVLTIAGSDSGGGAGIQADMRTCAMLGVHACVAVTAVTVQNTVGVKSFHEVPADTVAAQI 74
Query 65 EAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAPSALD 124
E VV DIG+QAAKTGMLAS++I+ V+ATWR L L+VPLVVDPV ASMHGD LLA SALD
Sbjct 75 ETVVPDIGIQAAKTGMLASAQIITAVSATWRELGLTVPLVVDPVSASMHGDALLASSALD 134
Query 125 SLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHLRSSD 184
++R LFPLATL+TPNL E RLLV +EVVDA +QR AA+ALHALGPQWVLVKGGHL S
Sbjct 135 AMRDNLFPLATLVTPNLHEVRLLVGVEVVDAATQRTAARALHALGPQWVLVKGGHLPSEQ 194
Query 185 GSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRWVTEC 244
S DLL+DG + +F R+ T DDHG GDTLA A A ALAHGFTVP AV F K WVTEC
Sbjct 195 HSPDLLFDGTAFQEFPGPRVATSDDHGAGDTLAAATACALAHGFTVPAAVAFAKDWVTEC 254
Query 245 LRAAYPLGRGHGPVSPLFRLS 265
LRAAYPLG GHGPVSPLFRL+
Sbjct 255 LRAAYPLGNGHGPVSPLFRLA 275
>gi|325673948|ref|ZP_08153638.1| phosphomethylpyrimidine kinase [Rhodococcus equi ATCC 33707]
gi|325555213|gb|EGD24885.1| phosphomethylpyrimidine kinase [Rhodococcus equi ATCC 33707]
Length=305
Score = 318 bits (815), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 171/267 (65%), Positives = 207/267 (78%), Gaps = 4/267 (1%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP R L+IAG+DSGGGAGIQAD RTMA+ GVHACVAV AVTVQN++GV HE+P + VA
Sbjct 34 TPIRALTIAGTDSGGGAGIQADSRTMAMCGVHACVAVAAVTVQNSVGVSGFHEIPRETVA 93
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLEL----SVPLVVDPVCASMHGDPL 117
Q+ VV DIGV AAKTGMLAS+ I+ VA + + S+PLVVDPVCASMHGDPL
Sbjct 94 AQVRCVVEDIGVSAAKTGMLASTAIIEAVAQVCTEVRIGRDGSIPLVVDPVCASMHGDPL 153
Query 118 LAPSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKG 177
L ALD++R L P+A+L+TPNLDE RL+ IEVVD + R AA+ALHALG QW +VKG
Sbjct 154 LHAEALDAVRNTLIPIASLVTPNLDEVRLITGIEVVDDATARRAAEALHALGAQWSMVKG 213
Query 178 GHLRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFG 237
GHLRSS S DLL+DG + ++F + R+ TG+DHGGGDTLA A+ ALA+G+ +PDAV FG
Sbjct 214 GHLRSSTSSTDLLFDGDTFHEFTSPRIDTGNDHGGGDTLAAAVTCALANGYAMPDAVAFG 273
Query 238 KRWVTECLRAAYPLGRGHGPVSPLFRL 264
K WVT+CL A+Y LG GHGPVSPL+RL
Sbjct 274 KEWVTKCLEASYDLGAGHGPVSPLWRL 300
>gi|312141222|ref|YP_004008558.1| phosphomethylpyrimidine kinase/hydroxymethylpyrimidine kinase
[Rhodococcus equi 103S]
gi|311890561|emb|CBH49879.1| phosphomethylpyrimidine kinase/hydroxymethylpyrimidine kinase
[Rhodococcus equi 103S]
Length=305
Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/267 (65%), Positives = 207/267 (78%), Gaps = 4/267 (1%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP R L+IAG+DSGGGAGIQAD RTMA+ GVHACVAV AVTVQN++GV HE+P + VA
Sbjct 34 TPIRALTIAGTDSGGGAGIQADSRTMAMCGVHACVAVAAVTVQNSVGVSGFHEIPPETVA 93
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLEL----SVPLVVDPVCASMHGDPL 117
Q+ VV DIGV AAKTGMLAS+ I+ VA + + S+PLVVDPVCASMHGDPL
Sbjct 94 AQVRCVVEDIGVSAAKTGMLASTAIIEAVAQVCTEVGIGRDGSIPLVVDPVCASMHGDPL 153
Query 118 LAPSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKG 177
L ALD++R L P+A+L+TPNLDE RL+ IEVVD + R AA+ALHALG QW +VKG
Sbjct 154 LHAEALDAVRNTLIPIASLVTPNLDEVRLITGIEVVDDATARRAAEALHALGAQWSMVKG 213
Query 178 GHLRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFG 237
GHLRSS S DLL+DG + ++F + R+ TG+DHGGGDTLA A+ ALA+G+ +PDAV FG
Sbjct 214 GHLRSSTSSTDLLFDGDTFHEFTSPRIDTGNDHGGGDTLAAAVTCALANGYAMPDAVAFG 273
Query 238 KRWVTECLRAAYPLGRGHGPVSPLFRL 264
K WVT+CL A+Y LG GHGPVSPL+RL
Sbjct 274 KEWVTKCLEASYDLGAGHGPVSPLWRL 300
>gi|226304976|ref|YP_002764934.1| phosphomethylpyrimidine kinase [Rhodococcus erythropolis PR4]
gi|229493708|ref|ZP_04387492.1| phosphomethylpyrimidine kinase [Rhodococcus erythropolis SK121]
gi|226184091|dbj|BAH32195.1| phosphomethylpyrimidine kinase [Rhodococcus erythropolis PR4]
gi|229319377|gb|EEN85214.1| phosphomethylpyrimidine kinase [Rhodococcus erythropolis SK121]
Length=280
Score = 314 bits (804), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 174/267 (66%), Positives = 209/267 (79%), Gaps = 4/267 (1%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP R L+IAG+DSGGGAGIQAD RTMA+ GVHACVAV AVTVQN++GV HE+P ++VA
Sbjct 12 TPIRALTIAGTDSGGGAGIQADSRTMAMCGVHACVAVAAVTVQNSVGVSGFHEIPPEIVA 71
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELS----VPLVVDPVCASMHGDPL 117
Q+ VV+DIGV AAKTGMLAS+ I+ VAA + + +PLVVDPVCASMHGDPL
Sbjct 72 DQVRVVVSDIGVGAAKTGMLASTTIIEAVAAVAAEVGIGRDRPIPLVVDPVCASMHGDPL 131
Query 118 LAPSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKG 177
L ALD++R L P AT++TPNLDE RL+ IEVVD +S R AA+ALHALG QW +VKG
Sbjct 132 LHEEALDAVRNTLIPAATVVTPNLDEVRLITGIEVVDDKSARQAAEALHALGAQWSIVKG 191
Query 178 GHLRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFG 237
GHLR+S+ S DLL+DG +F + R+ TG+DHGGGDTLA AI ALAHG++VPDAV FG
Sbjct 192 GHLRTSELSTDLLFDGDRFLEFSSARIDTGNDHGGGDTLAAAITCALAHGYSVPDAVAFG 251
Query 238 KRWVTECLRAAYPLGRGHGPVSPLFRL 264
K WVT+CL A+Y LG GHGPVSPL+RL
Sbjct 252 KEWVTKCLEASYDLGAGHGPVSPLWRL 278
>gi|296141413|ref|YP_003648656.1| phosphomethylpyrimidine kinase [Tsukamurella paurometabola DSM
20162]
gi|296029547|gb|ADG80317.1| phosphomethylpyrimidine kinase [Tsukamurella paurometabola DSM
20162]
Length=280
Score = 312 bits (799), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 159/265 (60%), Positives = 197/265 (75%), Gaps = 2/265 (0%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP RV++IAGSDSGG AG+Q+D+RT AL GVH AVTAVTVQN+LGV H +P + VA
Sbjct 12 TPVRVMTIAGSDSGGAAGLQSDLRTFALTGVHGTSAVTAVTVQNSLGVTGFHAIPPETVA 71
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELS--VPLVVDPVCASMHGDPLLA 119
GQI AVV DIGV KTGMLA++ I+ +A T + + +P +VDPVCAS HGDPLL+
Sbjct 72 GQILAVVADIGVSGVKTGMLANAGIIDAIAGTAADVGIGEHIPFLVDPVCASQHGDPLLS 131
Query 120 PSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGH 179
P ALD+L +LFPLA ++TPNLDE RL+ IEV+D +QR AA+ALH LGP+W LVKGGH
Sbjct 132 PEALDTLLRRLFPLAWVVTPNLDEVRLITGIEVIDDATQRDAARALHDLGPRWALVKGGH 191
Query 180 LRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKR 239
LR++ S D+LYDG +F+AQR+ T DHG GDTL A ALAHG +VP+A+ FGK
Sbjct 192 LRTAVTSTDVLYDGTDFVEFEAQRIDTRHDHGAGDTLGAAAVCALAHGRSVPEAIAFGKE 251
Query 240 WVTECLRAAYPLGRGHGPVSPLFRL 264
WVT L AAYP+G GHGPV+ +RL
Sbjct 252 WVTRSLAAAYPVGAGHGPVNASWRL 276
>gi|317506787|ref|ZP_07964564.1| phosphomethylpyrimidine kinase [Segniliparus rugosus ATCC BAA-974]
gi|316254919|gb|EFV14212.1| phosphomethylpyrimidine kinase [Segniliparus rugosus ATCC BAA-974]
Length=283
Score = 311 bits (797), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 172/267 (65%), Positives = 202/267 (76%), Gaps = 4/267 (1%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TPP+VL+IAGSDSGGGAGIQAD+RT AL G H AVTAVTVQNTLGV HEVP + VA
Sbjct 16 TPPKVLTIAGSDSGGGAGIQADLRTFALAGCHGMTAVTAVTVQNTLGVSGFHEVPPETVA 75
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELS----VPLVVDPVCASMHGDPL 117
QI V +DIGVQAAKTGMLAS+ IV+ VAA + + VP VVDPVCASMHGDPL
Sbjct 76 AQIRVVASDIGVQAAKTGMLASAPIVSAVAAACAEVGIGGDGGVPFVVDPVCASMHGDPL 135
Query 118 LAPSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKG 177
L P ALD +R ++FPLAT++TPNLDE RLLV IEV D S AA+ L LG +W LV G
Sbjct 136 LKPEALDVIRAEIFPLATVVTPNLDEVRLLVGIEVTDRPSAEEAARRLVGLGARWALVTG 195
Query 178 GHLRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFG 237
GHLRS+ S D+LYDG S ++F R+PTG+DHGGGDTLA+++ ALA G +VP+AV F
Sbjct 196 GHLRSAPESVDILYDGRSFFEFAKPRIPTGNDHGGGDTLASSMTCALARGASVPEAVAFA 255
Query 238 KRWVTECLRAAYPLGRGHGPVSPLFRL 264
K WVTE LR +Y LG GHGPV+PL+RL
Sbjct 256 KDWVTESLRWSYNLGAGHGPVNPLWRL 282
>gi|343924276|ref|ZP_08763835.1| phosphomethylpyrimidine kinase [Gordonia alkanivorans NBRC 16433]
gi|343765806|dbj|GAA10761.1| phosphomethylpyrimidine kinase [Gordonia alkanivorans NBRC 16433]
Length=285
Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 178/268 (67%), Positives = 204/268 (77%), Gaps = 4/268 (1%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP RV++IAGSDSGGGAGIQADMRT ALLG+H CVAVTAVTVQN+LGV E+ + VA
Sbjct 15 TPVRVMTIAGSDSGGGAGIQADMRTFALLGLHGCVAVTAVTVQNSLGVTGFQEIAPETVA 74
Query 62 GQIEAVVTDIGVQAAKTGMLASSRI----VATVAATWRRLELSVPLVVDPVCASMHGDPL 117
QI V DIGV AAKTGMLAS+ I VA +A+ + S PLVVDPVCASMHG+ L
Sbjct 75 AQIATVADDIGVGAAKTGMLASAPIIDAVVAQCSASGIGRDGSSPLVVDPVCASMHGNQL 134
Query 118 LAPSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKG 177
LA SALD+LR LFPLAT++TPNLDE RL+ I+VVD SQR AAKAL LGP W LVKG
Sbjct 135 LADSALDTLRDNLFPLATVVTPNLDEVRLITGIDVVDTGSQRDAAKALFDLGPAWALVKG 194
Query 178 GHLRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFG 237
GHLRSSD S DLLYDG + + +R+ T DHG GDTLA AI ALAHG++VPDAV F
Sbjct 195 GHLRSSDHSPDLLYDGAEFIELNHERIDTAHDHGAGDTLAAAITCALAHGYSVPDAVCFA 254
Query 238 KRWVTECLRAAYPLGRGHGPVSPLFRLS 265
K+WVT L AAYPLG GHGPV+PL+R+S
Sbjct 255 KKWVTRGLAAAYPLGAGHGPVNPLWRVS 282
>gi|226361312|ref|YP_002779090.1| phosphomethylpyrimidine kinase [Rhodococcus opacus B4]
gi|226239797|dbj|BAH50145.1| phosphomethylpyrimidine kinase [Rhodococcus opacus B4]
Length=281
Score = 305 bits (782), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 177/267 (67%), Positives = 209/267 (79%), Gaps = 4/267 (1%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP RVL+IAG+DSGGGAGIQAD RTMAL GVHACVAV AVTVQN++GV HE+P + VA
Sbjct 12 TPVRVLTIAGTDSGGGAGIQADSRTMALCGVHACVAVAAVTVQNSVGVSGFHEIPPETVA 71
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELS----VPLVVDPVCASMHGDPL 117
Q+ VV DIGV AAKTGMLAS+ I+ VAA + + VPLVVDPVCASMHGDPL
Sbjct 72 AQVRCVVDDIGVGAAKTGMLASTAIIEAVAAVCTEVGIGRDRPVPLVVDPVCASMHGDPL 131
Query 118 LAPSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKG 177
L ALD++R L P+AT++TPNLDE RL+ IEVVD + R AA+ALHALG QW +VKG
Sbjct 132 LHAEALDAVRNTLIPIATVVTPNLDEIRLITGIEVVDDATARRAAEALHALGAQWSIVKG 191
Query 178 GHLRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFG 237
GHLR+S S DLL+DG +F + R+ TG+DHGGGDTLA AIA+ALAHG++VPDAV FG
Sbjct 192 GHLRTSASSTDLLFDGDRFLEFSSPRIDTGNDHGGGDTLAAAIASALAHGWSVPDAVAFG 251
Query 238 KRWVTECLRAAYPLGRGHGPVSPLFRL 264
K WVT+CL A+Y LG GHGPVSPL+RL
Sbjct 252 KEWVTKCLEASYDLGAGHGPVSPLWRL 278
>gi|262200660|ref|YP_003271868.1| phosphomethylpyrimidine kinase [Gordonia bronchialis DSM 43247]
gi|262084007|gb|ACY19975.1| phosphomethylpyrimidine kinase [Gordonia bronchialis DSM 43247]
Length=290
Score = 305 bits (782), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 180/268 (68%), Positives = 209/268 (78%), Gaps = 4/268 (1%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP RV++IAGSDSGGGAGIQADMRT ALLG+HACVAVTAVTVQN+LGV E+ DVVA
Sbjct 15 TPTRVMTIAGSDSGGGAGIQADMRTFALLGLHACVAVTAVTVQNSLGVSGFQEIAPDVVA 74
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLEL----SVPLVVDPVCASMHGDPL 117
Q+ V+ DIGV AAKTGMLAS+ I+ V A L +VPLVVDPVCASMHGDPL
Sbjct 75 AQMRCVIDDIGVSAAKTGMLASAPIIDAVVAQCHDSGLGRDAAVPLVVDPVCASMHGDPL 134
Query 118 LAPSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKG 177
LA ALD+LR +L P+AT++TPNLDE RL+ I+VVD +QR AA+ALH LG +W LVKG
Sbjct 135 LAVEALDTLRTKLIPIATVVTPNLDEVRLITGIDVVDDATQRDAARALHDLGAKWALVKG 194
Query 178 GHLRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFG 237
GHLRSSD S DLLYDG ++F+ R+ TG DHG GDTLA AIAAALAHG+ VPDAV F
Sbjct 195 GHLRSSDHSTDLLYDGNDFHEFEHARIDTGHDHGAGDTLAAAIAAALAHGYPVPDAVTFA 254
Query 238 KRWVTECLRAAYPLGRGHGPVSPLFRLS 265
KRWV+ L AAYPLG GHG V+PL+R+S
Sbjct 255 KRWVSRGLAAAYPLGTGHGAVNPLWRVS 282
>gi|111019176|ref|YP_702148.1| phosphomethylpyrimidine kinase [Rhodococcus jostii RHA1]
gi|110818706|gb|ABG93990.1| phosphomethylpyrimidine kinase [Rhodococcus jostii RHA1]
Length=281
Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 176/268 (66%), Positives = 209/268 (78%), Gaps = 4/268 (1%)
Query 1 MTPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVV 60
TP RVL+IAG+DSGGGAGIQAD RTMAL GVHACVAV AVTVQN++GV HE+P + V
Sbjct 11 QTPVRVLTIAGTDSGGGAGIQADSRTMALCGVHACVAVAAVTVQNSVGVSGFHEIPPETV 70
Query 61 AGQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELS----VPLVVDPVCASMHGDP 116
A Q+ VV DIGV AAKTGMLAS+ I+ VAA + + VPLVVDPVCASMHGDP
Sbjct 71 AAQVRCVVDDIGVGAAKTGMLASTAIIEAVAAVCTEVGIGRDQPVPLVVDPVCASMHGDP 130
Query 117 LLAPSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVK 176
LL ALD++R L P+AT++TPNLDE RL+ IEVV+ + R AA+ALHALG QW +VK
Sbjct 131 LLHAEALDAVRNTLIPIATVVTPNLDEIRLITGIEVVEDVTARRAAEALHALGAQWSIVK 190
Query 177 GGHLRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDF 236
GGHLR+S S DLL+DG +F + R+ TG+DHGGGDTLA AIA+ALAHG++VPDAV F
Sbjct 191 GGHLRTSASSTDLLFDGDRFLEFSSPRIDTGNDHGGGDTLAAAIASALAHGWSVPDAVAF 250
Query 237 GKRWVTECLRAAYPLGRGHGPVSPLFRL 264
GK WVT+CL A+Y LG GHGPVSPL+RL
Sbjct 251 GKEWVTKCLEASYDLGAGHGPVSPLWRL 278
>gi|326383428|ref|ZP_08205115.1| bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine
kinase [Gordonia neofelifaecis NRRL B-59395]
gi|326197834|gb|EGD55021.1| bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine
kinase [Gordonia neofelifaecis NRRL B-59395]
Length=284
Score = 303 bits (775), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/267 (67%), Positives = 205/267 (77%), Gaps = 4/267 (1%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP RV+++AGSDSGGGAGIQADMRT ALLG+HACVAVTAVTVQN+ GV I E+ VVA
Sbjct 13 TPVRVMTVAGSDSGGGAGIQADMRTFALLGLHACVAVTAVTVQNSTGVTGIQEIEPSVVA 72
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLEL----SVPLVVDPVCASMHGDPL 117
Q+ +VV DIGV A KTGMLAS I+ +A L + VPLVVDPVCASMHGDPL
Sbjct 73 AQMRSVVPDIGVSAVKTGMLASGPIIDAIADAAVDLRIGRDADVPLVVDPVCASMHGDPL 132
Query 118 LAPSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKG 177
LA AL +L+ +LFPLAT++TPNLDE RLL I+VVDA++QRAAA ALHALGP+W LVKG
Sbjct 133 LAADALGALKERLFPLATVVTPNLDEVRLLTGIDVVDADTQRAAAVALHALGPRWALVKG 192
Query 178 GHLRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFG 237
GHLR SD S D+LYDG +F + R+ T DHG GDTLA AI AL HG+ VPDAV F
Sbjct 193 GHLRGSDVSPDVLYDGTGFLEFPSARIDTPHDHGAGDTLAAAITGALGHGYAVPDAVGFA 252
Query 238 KRWVTECLRAAYPLGRGHGPVSPLFRL 264
K+WVT L AAYPLG GHGPV+PL+RL
Sbjct 253 KQWVTRGLAAAYPLGAGHGPVNPLWRL 279
>gi|54027293|ref|YP_121535.1| phosphomethylpyrimidine kinase [Nocardia farcinica IFM 10152]
gi|54018801|dbj|BAD60171.1| putative phosphomethylpyrimidine kinase [Nocardia farcinica IFM
10152]
Length=281
Score = 294 bits (753), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 175/267 (66%), Positives = 203/267 (77%), Gaps = 4/267 (1%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP RVL+IAG+DSGGGAGIQAD RTM L GVHA VAV AVTVQN++GV HE+P +VA
Sbjct 12 TPVRVLTIAGTDSGGGAGIQADSRTMTLCGVHALVAVAAVTVQNSVGVSGFHEIPPQIVA 71
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELS----VPLVVDPVCASMHGDPL 117
Q+ +V DIGV AAKTGMLASS I+ VAA R + + PLVVDPV ASMHGDPL
Sbjct 72 DQVRSVAGDIGVGAAKTGMLASSAIIEAVAAVCREVGIGGDGPTPLVVDPVAASMHGDPL 131
Query 118 LAPSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKG 177
L ALD++R LFPLAT++TPNLDE RLL I V D S R AA+ALHA GP+WV+VKG
Sbjct 132 LHEEALDAVRHTLFPLATVVTPNLDEVRLLTGIRVTDEASARRAAEALHAFGPRWVVVKG 191
Query 178 GHLRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFG 237
GHLRSS+ S DLL+DG + +F A R+ TG+DHGGGDTLA A+A ALAHG+ VP+AV FG
Sbjct 192 GHLRSSEVSTDLLFDGTTFQEFTAPRIATGNDHGGGDTLAAAVACALAHGYPVPEAVAFG 251
Query 238 KRWVTECLRAAYPLGRGHGPVSPLFRL 264
K W CL AAY LG GHGPVSPL+RL
Sbjct 252 KEWTRRCLAAAYDLGAGHGPVSPLWRL 278
>gi|331699441|ref|YP_004335680.1| phosphomethylpyrimidine kinase [Pseudonocardia dioxanivorans
CB1190]
gi|326954130|gb|AEA27827.1| phosphomethylpyrimidine kinase [Pseudonocardia dioxanivorans
CB1190]
Length=277
Score = 293 bits (749), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 153/269 (57%), Positives = 192/269 (72%), Gaps = 5/269 (1%)
Query 1 MTPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVV 60
+TPPRV++IAG+DSGGGAGI AD+RT A GVH C+AV AVTVQN++GV +H +P + V
Sbjct 3 VTPPRVMTIAGTDSGGGAGIAADLRTFAACGVHGCLAVCAVTVQNSVGVTAVHPIPPETV 62
Query 61 AGQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELS----VPLVVDPVCASMHGDP 116
A QI AV +DIG+ AAKTGMLA + I+ VA + PLVVDPV ASMHGDP
Sbjct 63 AAQITAVASDIGLDAAKTGMLAGAEIIEAVAHACDANGIGAVHPTPLVVDPVAASMHGDP 122
Query 117 LLAPSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVK 176
LLA SALD+ R LFP AT++TPNLDE RLLV ++V D Q AAK LH LGP++VLVK
Sbjct 123 LLADSALDAFRSLLFPRATVITPNLDEVRLLVGVDVHDRAGQYEAAKVLHGLGPRYVLVK 182
Query 177 GGHLRSS-DGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVD 235
GGHL DG DLL+DG + + R TG+ HGGGD++A A+A+ LA G + +AV
Sbjct 183 GGHLAEDVDGCVDLLFDGDTFVELPGPRFDTGNTHGGGDSMAAAVASGLARGMAIGEAVA 242
Query 236 FGKRWVTECLRAAYPLGRGHGPVSPLFRL 264
F KR++ E +R +YPLG GHGPVSPL+ +
Sbjct 243 FAKRYIVEAVRNSYPLGAGHGPVSPLWTV 271
>gi|296393660|ref|YP_003658544.1| phosphomethylpyrimidine kinase [Segniliparus rotundus DSM 44985]
gi|296180807|gb|ADG97713.1| phosphomethylpyrimidine kinase [Segniliparus rotundus DSM 44985]
Length=282
Score = 292 bits (747), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 163/266 (62%), Positives = 194/266 (73%), Gaps = 3/266 (1%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TPPRVL+IAGSDSGGGAG+QAD+RT AL G H AVTAVTVQNTLGV + E+P + V
Sbjct 16 TPPRVLTIAGSDSGGGAGLQADLRTFALAGCHGMTAVTAVTVQNTLGVSGVAEIPAETVG 75
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELS---VPLVVDPVCASMHGDPLL 118
QI +V DIGVQAAKTGMLAS +V+ V + + VP VVDPVCASMHGDPLL
Sbjct 76 AQIRSVAGDIGVQAAKTGMLASGPVVSAVVSACAEAGIGGGGVPFVVDPVCASMHGDPLL 135
Query 119 APSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGG 178
P ALD +R +LFPLAT++TPNLDE RLLV +EV S AA+ L LG +W LV GG
Sbjct 136 KPDALDVIRAELFPLATVVTPNLDEVRLLVGVEVTGRASAEEAARRLVGLGARWALVTGG 195
Query 179 HLRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGK 238
HLRS S D+LYDG S +F R+PT +DHGGGDTLA+++ ALA G +VP+AV F K
Sbjct 196 HLRSDPQSVDILYDGESFLEFAKPRVPTENDHGGGDTLASSMTCALARGASVPEAVAFAK 255
Query 239 RWVTECLRAAYPLGRGHGPVSPLFRL 264
WVTE LR +Y +G GHGPV+PL+RL
Sbjct 256 DWVTESLRWSYSIGGGHGPVNPLWRL 281
>gi|325002844|ref|ZP_08123956.1| phosphomethylpyrimidine kinase [Pseudonocardia sp. P1]
Length=284
Score = 291 bits (745), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 162/266 (61%), Positives = 194/266 (73%), Gaps = 5/266 (1%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TPPR L+IAG+DSGGGAGI AD+RT A GVH C+AV AVTVQNT+GV +H +P D +A
Sbjct 9 TPPRALTIAGTDSGGGAGIAADLRTFAACGVHGCLAVCAVTVQNTVGVTGVHTIPLDTIA 68
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLEL----SVPLVVDPVCASMHGDPL 117
GQ+ V +DIG+QAAKTGMLA++ I+ VAA + + PLVVDPV ASMHGDPL
Sbjct 69 GQVTTVASDIGLQAAKTGMLANAEIIEAVAAACDGNGIGAGRATPLVVDPVAASMHGDPL 128
Query 118 LAPSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKG 177
LA ALD+ R LFP ATL+TPNLDE RLLV+ +V D + Q AAAKALH LGP+ VLVKG
Sbjct 129 LAAEALDAYRHTLFPRATLVTPNLDEIRLLVEHDVHDRDGQYAAAKALHDLGPRAVLVKG 188
Query 178 GHLRS-SDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDF 236
GHL +DG DLLYDG + R TGD HGGGD+LA A+A+ LA G V AV F
Sbjct 189 GHLAGDTDGCLDLLYDGEVFVELPGPRFDTGDTHGGGDSLAAAVASGLARGHDVEAAVRF 248
Query 237 GKRWVTECLRAAYPLGRGHGPVSPLF 262
GKR++ E +R +YPLG GHGPVSPL+
Sbjct 249 GKRYIVEAVRHSYPLGAGHGPVSPLW 274
>gi|333918221|ref|YP_004491802.1| phosphomethylpyrimidine kinase [Amycolicicoccus subflavus DQS3-9A1]
gi|333480442|gb|AEF39002.1| Phosphomethylpyrimidine kinase [Amycolicicoccus subflavus DQS3-9A1]
Length=287
Score = 289 bits (739), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 169/270 (63%), Positives = 201/270 (75%), Gaps = 7/270 (2%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP R L+IAGSDSGGGAGIQADMRTMAL GVH CVAV A+TVQN++GV +HE+P + VA
Sbjct 13 TPVRALTIAGSDSGGGAGIQADMRTMALCGVHGCVAVAAITVQNSVGVTGVHEIPPETVA 72
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLEL-------SVPLVVDPVCASMHG 114
QI +VVTDI V AAKTGML+S+ I+ V A L + +PLVVDPV ASMHG
Sbjct 73 AQIRSVVTDISVGAAKTGMLSSAPIIEAVVAECADLGIGNTSKGQEIPLVVDPVAASMHG 132
Query 115 DPLLAPSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVL 174
DPLL AL++LR L P AT++TPNLDE RLL I VVD+E+Q AA+ L LG +W L
Sbjct 133 DPLLRSDALEALRDLLIPQATIVTPNLDEVRLLTGINVVDSETQAHAAEKLLELGAEWAL 192
Query 175 VKGGHLRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAV 234
+KGGHLRSS S DLL +G ++ + R+ TG DHGGGDTLA A A ALAHG++VP AV
Sbjct 193 IKGGHLRSSAESRDLLTNGTERHELTSYRVQTGHDHGGGDTLAAATACALAHGYSVPGAV 252
Query 235 DFGKRWVTECLRAAYPLGRGHGPVSPLFRL 264
F KRWVT+CL +AYPLG GHGPVSPL+RL
Sbjct 253 TFAKRWVTKCLESAYPLGAGHGPVSPLWRL 282
>gi|300790378|ref|YP_003770669.1| phosphomethylpyrimidine kinase [Amycolatopsis mediterranei U32]
gi|299799892|gb|ADJ50267.1| phosphomethylpyrimidine kinase [Amycolatopsis mediterranei U32]
gi|340532062|gb|AEK47267.1| phosphomethylpyrimidine kinase [Amycolatopsis mediterranei S699]
Length=265
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 154/264 (59%), Positives = 189/264 (72%), Gaps = 1/264 (0%)
Query 1 MTPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVV 60
MTP L+IAGSDSGGGAGIQAD+RT GVH VA+TAVTVQN+LGV+ E+P DVV
Sbjct 1 MTPRTALTIAGSDSGGGAGIQADLRTFFAHGVHGLVALTAVTVQNSLGVQGFTEIPADVV 60
Query 61 AGQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAP 120
QI+AV +D+GV AAKTGMLA++ I+ +VA T +E+ P VVDPV ASM GDPLL
Sbjct 61 TAQIKAVASDMGVNAAKTGMLATAEIIRSVAKTLDEVEVG-PFVVDPVAASMTGDPLLRE 119
Query 121 SALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHL 180
AL+++R +LFP ATL+TPNLDE RLL I VVD SQR AA+AL G +WVLVKGGH+
Sbjct 120 DALEAIRTELFPRATLITPNLDEVRLLTGISVVDPASQREAAEALLEFGSRWVLVKGGHM 179
Query 181 RSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRW 240
+ ++ DLL DG R T + HGGGDTLA+AI A+LA G +VPDAV GK++
Sbjct 180 QGTEDCVDLLSDGREYIALSGPRYLTENTHGGGDTLASAITASLAKGASVPDAVAAGKKF 239
Query 241 VTECLRAAYPLGRGHGPVSPLFRL 264
+ C+ AYPLG G GPVSP + L
Sbjct 240 IERCVAEAYPLGAGVGPVSPFWVL 263
>gi|296141412|ref|YP_003648655.1| phosphomethylpyrimidine kinase [Tsukamurella paurometabola DSM
20162]
gi|296029546|gb|ADG80316.1| phosphomethylpyrimidine kinase [Tsukamurella paurometabola DSM
20162]
Length=295
Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 170/268 (64%), Positives = 198/268 (74%), Gaps = 4/268 (1%)
Query 1 MTPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVV 60
+ P RVL+IAGSDSGGGAGIQADMRT A+LGVHACVAVTA+TVQN++GV+D EV +V
Sbjct 22 VAPHRVLTIAGSDSGGGAGIQADMRTFAMLGVHACVAVTAITVQNSVGVQDFSEVAPAIV 81
Query 61 AGQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELS----VPLVVDPVCASMHGDP 116
QI +V DIGV+AAKTGMLAS+ I+ VAA ++ PLVVDPV ASMHGDP
Sbjct 82 GSQIRSVAGDIGVEAAKTGMLASTAIIEAVAAAADDQDIGKGRGAPLVVDPVAASMHGDP 141
Query 117 LLAPSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVK 176
LLA ALD+LR L P AT+ TPNLDE RL+ IEV D SQR AA+AL LG QW L+K
Sbjct 142 LLATDALDALRTLLLPRATVATPNLDEVRLITGIEVCDGASQRDAARALLDLGVQWALIK 201
Query 177 GGHLRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDF 236
GGHLR S D+L DG + R+PTG DHG GDTLA AI AALAHG VP+AV+F
Sbjct 202 GGHLRDCPDSPDVLTDGEDFVELVCPRVPTGHDHGAGDTLAAAITAALAHGRAVPEAVEF 261
Query 237 GKRWVTECLRAAYPLGRGHGPVSPLFRL 264
GK WVTE LR +YPLG GHGPV+PL+R+
Sbjct 262 GKAWVTEGLRWSYPLGAGHGPVNPLWRV 289
>gi|257057416|ref|YP_003135248.1| phosphomethylpyrimidine kinase [Saccharomonospora viridis DSM
43017]
gi|256587288|gb|ACU98421.1| phosphomethylpyrimidine kinase [Saccharomonospora viridis DSM
43017]
Length=279
Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/267 (58%), Positives = 184/267 (69%), Gaps = 4/267 (1%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP L+IAGSDSGGGAGIQAD+RT GVH A+TAVTVQN++GV E+P DVVA
Sbjct 4 TPRTALTIAGSDSGGGAGIQADLRTFFACGVHGMTAITAVTVQNSVGVHGFTEIPTDVVA 63
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLEL----SVPLVVDPVCASMHGDPL 117
QIEAV D+G AAKTGMLA++ I+ TVA+ + + VPLVVDPV ASMHGDPL
Sbjct 64 AQIEAVTGDMGADAAKTGMLATAEIITTVASAVDKAGIGKRHDVPLVVDPVAASMHGDPL 123
Query 118 LAPSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKG 177
L AL+++R +LFP ATL+TPNLDE RLL + V D QR AA AL LGP+WVLVKG
Sbjct 124 LREEALEAIRTELFPRATLVTPNLDEVRLLTGLSVTDVTEQRKAADALLELGPRWVLVKG 183
Query 178 GHLRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFG 237
GH+ S DLL DG + R T HGGGDTLA+AI A LA GF +PDAV G
Sbjct 184 GHMTDSPECVDLLSDGTHVVELTCPRHDTPHTHGGGDTLASAITAHLAKGFDMPDAVAAG 243
Query 238 KRWVTECLRAAYPLGRGHGPVSPLFRL 264
K+++ C+ +YPLG G GPVSP +RL
Sbjct 244 KKFIERCVIESYPLGEGVGPVSPFWRL 270
>gi|257057417|ref|YP_003135249.1| phosphomethylpyrimidine kinase [Saccharomonospora viridis DSM
43017]
gi|256587289|gb|ACU98422.1| phosphomethylpyrimidine kinase [Saccharomonospora viridis DSM
43017]
Length=268
Score = 265 bits (677), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 140/263 (54%), Positives = 180/263 (69%), Gaps = 4/263 (1%)
Query 7 LSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVAGQIEA 66
++IAGSDSGG AG++AD+RT GVH VAVTAVTVQNTLGV D ++P +VAGQIEA
Sbjct 1 MTIAGSDSGGAAGLEADLRTFITCGVHGLVAVTAVTVQNTLGVHDRTDIPAHIVAGQIEA 60
Query 67 VVTDIGVQAAKTGMLASSRIVATVAATWRRL----ELSVPLVVDPVCASMHGDPLLAPSA 122
VV D+GV A KTGMLAS I+ TVA T R+ + VP VVDPV ASMHG PL +
Sbjct 61 VVDDMGVDAVKTGMLASGEIIETVADTCERVGIGGDTGVPFVVDPVAASMHGHPLFDDTG 120
Query 123 LDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHLRS 182
L +LR +L P+AT++TPNLDE RLL +EV E R AA AL LGP++VLVKGGHL
Sbjct 121 LTALRDRLLPMATIVTPNLDEVRLLTGLEVTRREQMRDAAVALRELGPRFVLVKGGHLTD 180
Query 183 SDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRWVT 242
DLL+DG + + A R+ T HG GD +A+A+ + LA G ++P+A FGK +V+
Sbjct 181 DPECVDLLFDGTTFTELPAPRVDTPHTHGAGDAMASALTSGLARGMSIPEATRFGKWYVS 240
Query 243 ECLRAAYPLGRGHGPVSPLFRLS 265
+R +YP+G GPVS +R++
Sbjct 241 NAVRHSYPMGAKVGPVSAFWRVA 263
>gi|256374577|ref|YP_003098237.1| phosphomethylpyrimidine kinase [Actinosynnema mirum DSM 43827]
gi|255918880|gb|ACU34391.1| phosphomethylpyrimidine kinase [Actinosynnema mirum DSM 43827]
Length=276
Score = 264 bits (675), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 155/267 (59%), Positives = 186/267 (70%), Gaps = 3/267 (1%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
TP +VL+IAGSDSGGGAG+QAD+R +A GVH AVTAVTVQN+LGV + E+P + VA
Sbjct 9 TPKKVLTIAGSDSGGGAGLQADLRVLAACGVHGMTAVTAVTVQNSLGVSGVVEIPAEQVA 68
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELS---VPLVVDPVCASMHGDPLL 118
QI V TDIGV AAKTGMLAS+ I+ VAA + + P VVDPV ASMHGDPLL
Sbjct 69 AQIRVVATDIGVDAAKTGMLASAPIIEAVAAACDEVGIGSGGTPFVVDPVSASMHGDPLL 128
Query 119 APSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGG 178
+AL++LR LFP ATL+TPNLDE RLL ++V E QR AK LH +GPQWVLVKGG
Sbjct 129 TDAALEALRVLLFPRATLVTPNLDEVRLLTGVDVRTREEQREVAKVLHGMGPQWVLVKGG 188
Query 179 HLRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGK 238
H+R DLLYDG +++ R HG GDTLA++I + LA G V DAV FGK
Sbjct 189 HMRGDPECLDLLYDGREFHEYVGPRYDVLHTHGSGDTLASSICSRLARGVGVVDAVRFGK 248
Query 239 RWVTECLRAAYPLGRGHGPVSPLFRLS 265
+V + AAYPLG G GPVSPL+RL+
Sbjct 249 DFVVRSVLAAYPLGAGVGPVSPLWRLA 275
>gi|300790380|ref|YP_003770671.1| phosphomethylpyrimidine kinase [Amycolatopsis mediterranei U32]
gi|299799894|gb|ADJ50269.1| phosphomethylpyrimidine kinase [Amycolatopsis mediterranei U32]
gi|340532064|gb|AEK47269.1| phosphomethylpyrimidine kinase [Amycolatopsis mediterranei S699]
Length=272
Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 142/266 (54%), Positives = 178/266 (67%), Gaps = 4/266 (1%)
Query 4 PRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVAGQ 63
P L+IAGSDSGG AG+QAD+RT GVH VAVTAVTVQNTLGV D ++P +VAGQ
Sbjct 3 PSALTIAGSDSGGAAGLQADLRTFLTCGVHGLVAVTAVTVQNTLGVHDRADLPPHIVAGQ 62
Query 64 IEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLEL----SVPLVVDPVCASMHGDPLLA 119
IEAV D+GV AAKTGMLAS+ I+ VAA E+ +P VVDPV ASMHG PL
Sbjct 63 IEAVAADMGVGAAKTGMLASAEIIHAVAAACDTAEIGRDAKIPFVVDPVAASMHGHPLFD 122
Query 120 PSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGH 179
+ L +LR +L P AT+LTPNLDE RLL + V D E AA LH +GP++VLVK GH
Sbjct 123 EAGLVALRDELLPRATVLTPNLDEVRLLTGMTVKDREGMHTAAVVLHRMGPRYVLVKSGH 182
Query 180 LRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKR 239
L++ DLL+DG + + QR PT HG GDT+A+A+ A LA G +V +A +GK
Sbjct 183 LQADPECVDLLFDGSTFVELPGQRYPTPHTHGAGDTMASALTAGLAKGMSVVEAARYGKW 242
Query 240 WVTECLRAAYPLGRGHGPVSPLFRLS 265
+V+ + AYP+G GPVS +RL+
Sbjct 243 FVSHAVEHAYPMGAKVGPVSAFWRLA 268
>gi|302530618|ref|ZP_07282960.1| pyridoxal kinase [Streptomyces sp. AA4]
gi|302439513|gb|EFL11329.1| pyridoxal kinase [Streptomyces sp. AA4]
Length=274
Score = 258 bits (659), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 148/269 (56%), Positives = 184/269 (69%), Gaps = 4/269 (1%)
Query 1 MTPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVV 60
+TP L+IAGSDSGGGAG+QAD+RT GVH VA+TAVTVQN+LGV+ E+P DVV
Sbjct 3 LTPRTALTIAGSDSGGGAGVQADLRTFFANGVHGLVALTAVTVQNSLGVQGFSEIPADVV 62
Query 61 AGQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLEL----SVPLVVDPVCASMHGDP 116
QI+AV D+GV AAKTGMLA++ I+ VA T + + P VVDPV ASM G
Sbjct 63 TAQIKAVAEDMGVNAAKTGMLATAEIIQAVAKTLDEVHIGRTTDTPFVVDPVAASMTGHA 122
Query 117 LLAPSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVK 176
LL AL+++R +LFP ATL+TPNLDE RLL + V DA SQR AA+AL G QWVLVK
Sbjct 123 LLREEALEAIRTELFPRATLITPNLDEVRLLTGVTVTDAASQRTAAEALLEFGSQWVLVK 182
Query 177 GGHLRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDF 236
GGHL + DLL DG + + R+ T + HGGGDT+A+AI ++LA G VP AV
Sbjct 183 GGHLYDAADCVDLLTDGSAVIELSGPRIDTENTHGGGDTMASAITSSLAKGADVPTAVAE 242
Query 237 GKRWVTECLRAAYPLGRGHGPVSPLFRLS 265
KR++ C+ AYPLG G GPVSP +RL+
Sbjct 243 AKRFIERCVLEAYPLGAGVGPVSPFWRLA 271
>gi|302530621|ref|ZP_07282963.1| pyridoxal kinase [Streptomyces sp. AA4]
gi|302439516|gb|EFL11332.1| pyridoxal kinase [Streptomyces sp. AA4]
Length=287
Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 138/268 (52%), Positives = 178/268 (67%), Gaps = 4/268 (1%)
Query 2 TPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVA 61
+PP L+IAGSDSGG AG+QAD+RT GVH VAVTAVTVQNTLGV D ++P +VA
Sbjct 16 SPPSALTIAGSDSGGAAGLQADLRTFLTCGVHGLVAVTAVTVQNTLGVHDRADLPPHIVA 75
Query 62 GQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLEL----SVPLVVDPVCASMHGDPL 117
GQIEAV D+GV AAKTGMLAS+ I+ VAA + + ++P VVDPV A+M G L
Sbjct 76 GQIEAVAADMGVGAAKTGMLASAEIIHAVAAACDKAGIGRDGAIPFVVDPVAAAMTGQSL 135
Query 118 LAPSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKG 177
+ L +LR +L P AT+LTPNLDE RLL + V D E AA LH LGP++VLVK
Sbjct 136 FDDNGLAALRDELLPRATVLTPNLDEVRLLTGMTVTDREGMHTAAVVLHQLGPKYVLVKS 195
Query 178 GHLRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFG 237
GHL+S DLL+DG + + R T HG GDT+A+A+ A LA G +V +A +G
Sbjct 196 GHLQSDPECVDLLFDGSTFVELPGPRWQTPHTHGAGDTMASALTAGLAKGMSVVEAARYG 255
Query 238 KRWVTECLRAAYPLGRGHGPVSPLFRLS 265
K +V++ + +YP+G GPVS +RL+
Sbjct 256 KWFVSQAVEHSYPMGAKVGPVSAFWRLA 283
>gi|134097121|ref|YP_001102782.1| phosphomethylpyrimidine kinase [Saccharopolyspora erythraea NRRL
2338]
gi|291009662|ref|ZP_06567635.1| phosphomethylpyrimidine kinase [Saccharopolyspora erythraea NRRL
2338]
gi|133909744|emb|CAL99856.1| phosphomethylpyrimidine kinase [Saccharopolyspora erythraea NRRL
2338]
Length=288
Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 139/267 (53%), Positives = 169/267 (64%), Gaps = 4/267 (1%)
Query 3 PPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVAG 62
PP L+IAGSDSGG AG+ AD+RT GVH AVTAVTVQNT+GV + E+P + VA
Sbjct 18 PPTALTIAGSDSGGSAGMHADLRTFFACGVHGMTAVTAVTVQNTVGVTGLVEIPPETVAA 77
Query 63 QIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELS----VPLVVDPVCASMHGDPLL 118
Q++AV +DIGV AAKTG+LAS+ + V A + P VVDPV AS G+PLL
Sbjct 78 QVDAVASDIGVDAAKTGVLASAATIEAVMAVCDNHGIGRGGRTPFVVDPVAASRSGEPLL 137
Query 119 APSALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGG 178
P ALD+LR + FP ATL+TPNLDE RLL + AAKA++ GPQWVL+K G
Sbjct 138 RPDALDALRNEAFPRATLVTPNLDEVRLLTGFDARTRADLLDAAKAIYDFGPQWVLIKSG 197
Query 179 HLRSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGK 238
HL DLLYDG R T HG GD A++I AALA G ++PDAV GK
Sbjct 198 HLPDDPECVDLLYDGSQATPLPGPRYSTVHTHGAGDAFASSITAALAKGASMPDAVRLGK 257
Query 239 RWVTECLRAAYPLGRGHGPVSPLFRLS 265
R+VT + AYPLG G GPVS +R+S
Sbjct 258 RFVTRSVEHAYPLGAGIGPVSTFWRVS 284
>gi|221632426|ref|YP_002521647.1| phosphomethylpyrimidine kinase [Thermomicrobium roseum DSM 5159]
gi|221155969|gb|ACM05096.1| phosphomethylpyrimidine kinase [Thermomicrobium roseum DSM 5159]
Length=277
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 126/258 (49%), Positives = 167/258 (65%), Gaps = 2/258 (0%)
Query 1 MTPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVV 60
M P+ L+IAGSDSG GAGIQAD++T + LGV+ +TA+T QNTLGV +HE+P D+V
Sbjct 3 MRVPKALTIAGSDSGAGAGIQADLKTFSALGVYGSTVITAITAQNTLGVTAVHEIPTDIV 62
Query 61 AGQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAP 120
A Q++AV+ DIG AAKTGML+S+ I+ TVA+ RR + LVVDPV + GD LL
Sbjct 63 AAQLDAVMEDIGADAAKTGMLSSAAIIETVASGVRRHRID-RLVVDPVMVAKSGDRLLRE 121
Query 121 SALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHL 180
A+ +LR L PLA ++TPN EA +L V + E R AA+ +H G ++V+VKGGH+
Sbjct 122 DAISALRETLLPLAFIVTPNAPEAEVLCGRPVRNEEEMREAARIIHGFGARYVVVKGGHV 181
Query 181 RSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRW 240
D DLL+DG +F R+ T HG G T + AIAA LA GF VP AV K++
Sbjct 182 -EGDQVVDLLFDGAHFERFALPRVATPHTHGTGCTFSAAIAAFLARGFDVPTAVWEAKQY 240
Query 241 VTECLRAAYPLGRGHGPV 258
+ L AA+ +GRG PV
Sbjct 241 LHRALEAAFAIGRGRSPV 258
>gi|219850028|ref|YP_002464461.1| phosphomethylpyrimidine kinase [Chloroflexus aggregans DSM 9485]
gi|219544287|gb|ACL26025.1| phosphomethylpyrimidine kinase [Chloroflexus aggregans DSM 9485]
Length=263
Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 137/258 (54%), Positives = 174/258 (68%), Gaps = 3/258 (1%)
Query 1 MTPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVV 60
M+ PR L+IAGSDSGGGAGIQAD++ A LGV+ A+TAVT QNT+GV+ + E+P +V
Sbjct 1 MSLPRCLTIAGSDSGGGAGIQADLKAFAALGVYGMSALTAVTAQNTIGVQAVFELPATLV 60
Query 61 AGQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAP 120
A QI++VVTDIGV A KTGMLA++ I+A VA R LVVDPV + GDPLL P
Sbjct 61 AQQIDSVVTDIGVDAVKTGMLANAEIIAVVAEKARTYRWPY-LVVDPVMVAKSGDPLLRP 119
Query 121 SALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHL 180
A +L LFPLAT++TPNL EA+ L + + AA+ +HALGP+WVLVKGGHL
Sbjct 120 EARTALISLLFPLATIVTPNLPEAKALTGLNISSVAEMEQAAQQIHALGPRWVLVKGGHL 179
Query 181 RSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRW 240
+ S D+LYDG F + R+ T HG G T A+AIAA LA G +VP+AV K +
Sbjct 180 --AGDSVDVLYDGHEYRYFSSSRIETRHTHGTGCTFASAIAAGLAKGLSVPEAVQAAKDY 237
Query 241 VTECLRAAYPLGRGHGPV 258
+T L+ A LG+GHGPV
Sbjct 238 ITLALQHAPGLGQGHGPV 255
>gi|288923492|ref|ZP_06417611.1| phosphomethylpyrimidine kinase [Frankia sp. EUN1f]
gi|288345150|gb|EFC79560.1| phosphomethylpyrimidine kinase [Frankia sp. EUN1f]
Length=286
Score = 224 bits (572), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 144/254 (57%), Positives = 173/254 (69%), Gaps = 4/254 (1%)
Query 5 RVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVAGQI 64
RVL+IAGSDSGGGAGIQAD++TM LGVH AV +VT QN++GV + ++P + V QI
Sbjct 13 RVLTIAGSDSGGGAGIQADLKTMLALGVHGMSAVVSVTAQNSVGVHGVWDLPPEAVRAQI 72
Query 65 EAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAPSALD 124
AV DIG+ A KTGML+S+ +V TVA +SVP VVDPV S HG+PLLA A+D
Sbjct 73 RAVTEDIGLDAVKTGMLSSAALVETVAQEL--ATMSVPSVVDPVGVSKHGNPLLATDAVD 130
Query 125 SLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHLRSSD 184
LR +L P AT++TPNLDEARLL ++VVD R AA AL ALGP WVLVKGGHL
Sbjct 131 VLRRELLPRATIVTPNLDEARLLTGVDVVDETGLRRAADALLALGPTWVLVKGGHLPGD- 189
Query 185 GSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRWVTEC 244
+ DLL DG + Y+ + RLP HG G TLA+AIAA LA G VP AV K +VT
Sbjct 190 -AVDLLTDGSASYELRSPRLPRIHTHGTGCTLASAIAARLACGDDVPSAVRAAKTYVTGA 248
Query 245 LRAAYPLGRGHGPV 258
L A +PLG G GPV
Sbjct 249 LAAGFPLGAGIGPV 262
>gi|168041969|ref|XP_001773462.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675164|gb|EDQ61662.1| predicted protein [Physcomitrella patens subsp. patens]
Length=510
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 130/267 (49%), Positives = 173/267 (65%), Gaps = 6/267 (2%)
Query 4 PRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVVAGQ 63
PRVL++AGSDSG GAGIQADM+ LGV+ A+TAVT QNT+GV+ IHEVP D VA Q
Sbjct 10 PRVLTVAGSDSGAGAGIQADMKACGALGVYCTTAITAVTAQNTVGVQGIHEVPADFVASQ 69
Query 64 IEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAPSAL 123
+++V+ DIG KTGML S I+ ++ R + LVVDPV S GD L P+ L
Sbjct 70 VKSVLLDIGADVVKTGMLPSVEIIRSLCDILRTYPVK-GLVVDPVLISTSGDELAGPAIL 128
Query 124 DSLRGQLFPLATLLTPNLDEARLLVDIE-VVDAESQRAAAKALHALGPQWVLVKGGHLRS 182
D+LR LFPLA L+TPNL EA ++ + V R AA+A+H LGP++VLVKGGHL
Sbjct 129 DALRDDLFPLADLVTPNLPEASAIIGGDPVTTVAEMREAAEAIHQLGPRYVLVKGGHLPG 188
Query 183 SDGSCDLLYDGVSCY-QFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRWV 241
++ D+LYDG + + + R+ T + HG G TLA++IAA LA G ++ AV KR++
Sbjct 189 TNTLIDVLYDGTTFWHELPGSRIETRNTHGTGCTLASSIAAELAKGQSMLPAVLASKRYL 248
Query 242 TECLR--AAYPLGRG-HGPVSPLFRLS 265
+ L A +G G GPV+ LF+LS
Sbjct 249 KDVLEENATLKIGEGKQGPVNHLFKLS 275
>gi|254392470|ref|ZP_05007650.1| phosphomethylpyrimidine kinase [Streptomyces clavuligerus ATCC
27064]
gi|294815341|ref|ZP_06773984.1| Phosphomethylpyrimidine kinase [Streptomyces clavuligerus ATCC
27064]
gi|326443695|ref|ZP_08218429.1| putative phosphomethylpyrimidine kinase [Streptomyces clavuligerus
ATCC 27064]
gi|197706137|gb|EDY51949.1| phosphomethylpyrimidine kinase [Streptomyces clavuligerus ATCC
27064]
gi|294327940|gb|EFG09583.1| Phosphomethylpyrimidine kinase [Streptomyces clavuligerus ATCC
27064]
Length=265
Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 143/264 (55%), Positives = 171/264 (65%), Gaps = 4/264 (1%)
Query 1 MTPPRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTLGVKDIHEVPNDVV 60
M P VL++AGSDSGGGAGIQAD++TM LG H + AVT QN+ GV+ E+P + V
Sbjct 1 MRLPLVLTVAGSDSGGGAGIQADLKTMLALGTHGMSVIAAVTAQNSRGVQGYWELPPEAV 60
Query 61 AGQIEAVVTDIGVQAAKTGMLASSRIVATVAATWRRLELSVPLVVDPVCASMHGDPLLAP 120
Q +VV DIGVQA KTGMLAS+ +V TVA + P+VVDPV S HGDPLLA
Sbjct 61 RAQYRSVVDDIGVQAVKTGMLASASLVETVAELIAGTD--APVVVDPVGVSKHGDPLLAR 118
Query 121 SALDSLRGQLFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGHL 180
SALDS+RG L P ATL TPNLDE L +EVVD R AA A+ ALGP+WVL+KGGHL
Sbjct 119 SALDSVRGLLLPAATLATPNLDEVTQLTGVEVVDERGLREAAHAILALGPRWVLIKGGHL 178
Query 181 RSSDGSCDLLYDGVSCYQFDAQRLPTGDDHGGGDTLATAIAAALAHGFTVPDAVDFGKRW 240
+ DLL DG + A RL HG G TLA+AIAA LA G TVP+AV K +
Sbjct 179 PGD--AVDLLTDGTDEHWLRAPRLDNRHTHGTGCTLASAIAAGLAKGLTVPEAVRAAKEY 236
Query 241 VTECLRAAYPLGRGHGPVSPLFRL 264
+T + A +PLG G GPV +R
Sbjct 237 ITGAIAAGFPLGGGIGPVDHGWRF 260
Lambda K H
0.320 0.135 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 401076841216
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40