BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0424c Length=91 Score E Sequences producing significant alignments: (Bits) Value gi|15839811|ref|NP_334848.1| hypothetical protein MT0438 [Mycoba... 183 6e-45 gi|15607565|ref|NP_214938.1| hypothetical protein Rv0424c [Mycob... 183 7e-45 gi|289752453|ref|ZP_06511831.1| conserved hypothetical protein [... 182 1e-44 gi|254818954|ref|ZP_05223955.1| hypothetical protein MintA_03461... 150 7e-35 gi|296167900|ref|ZP_06850081.1| conserved hypothetical protein [... 148 2e-34 gi|342859085|ref|ZP_08715739.1| hypothetical protein MCOL_09413 ... 134 3e-30 gi|41410012|ref|NP_962848.1| hypothetical protein MAP3914c [Myco... 133 7e-30 gi|336460345|gb|EGO39245.1| hypothetical protein MAPs_41410 [Myc... 133 7e-30 gi|333989038|ref|YP_004521652.1| hypothetical protein JDM601_039... 127 5e-28 gi|240168899|ref|ZP_04747558.1| hypothetical protein MkanA1_0628... 123 1e-26 gi|183980763|ref|YP_001849054.1| hypothetical protein MMAR_0739 ... 116 9e-25 gi|118618882|ref|YP_907214.1| hypothetical protein MUL_3604 [Myc... 112 1e-23 gi|111018838|ref|YP_701810.1| hypothetical protein RHA1_ro01841 ... 102 2e-20 gi|226360939|ref|YP_002778717.1| hypothetical protein ROP_15250 ... 97.1 8e-19 gi|226307565|ref|YP_002767525.1| hypothetical protein RER_40780 ... 91.3 5e-17 gi|229493808|ref|ZP_04387586.1| conserved hypothetical protein [... 87.0 8e-16 gi|111020136|ref|YP_703108.1| hypothetical protein RHA1_ro03147 ... 81.6 3e-14 gi|296167304|ref|ZP_06849706.1| conserved hypothetical protein [... 81.3 5e-14 gi|302528643|ref|ZP_07280985.1| conserved hypothetical protein [... 79.3 2e-13 gi|238061927|ref|ZP_04606636.1| hypothetical protein MCAG_02893 ... 75.9 2e-12 gi|291007444|ref|ZP_06565417.1| hypothetical protein SeryN2_2321... 73.6 9e-12 gi|325673698|ref|ZP_08153389.1| hypothetical protein HMPREF0724_... 72.0 2e-11 gi|145592584|ref|YP_001156881.1| hypothetical protein Strop_0018... 70.9 6e-11 gi|159035696|ref|YP_001534949.1| hypothetical protein Sare_0022 ... 70.9 6e-11 gi|312139025|ref|YP_004006361.1| hypothetical protein REQ_15990 ... 70.5 7e-11 gi|120402656|ref|YP_952485.1| hypothetical protein Mvan_1650 [My... 66.2 1e-09 gi|126433901|ref|YP_001069592.1| hypothetical protein Mjls_1299 ... 63.5 9e-09 gi|345011839|ref|YP_004814193.1| hypothetical protein Strvi_4262... 62.0 3e-08 gi|296269646|ref|YP_003652278.1| hypothetical protein Tbis_1672 ... 49.7 1e-04 gi|134098097|ref|YP_001103758.1| hypothetical protein SACE_1511 ... 48.5 3e-04 gi|111223714|ref|YP_714508.1| hypothetical protein FRAAL4316 [Fr... 47.4 7e-04 gi|271962975|ref|YP_003337171.1| hypothetical protein Sros_1434 ... 45.4 0.003 gi|336179862|ref|YP_004585237.1| hypothetical protein FsymDg_404... 43.1 0.013 gi|158314297|ref|YP_001506805.1| hypothetical protein Franean1_2... 43.1 0.015 gi|302528644|ref|ZP_07280986.1| predicted protein [Streptomyces ... 42.7 0.020 gi|134098016|ref|YP_001103677.1| hypothetical protein SACE_1430 ... 42.4 0.021 gi|291007687|ref|ZP_06565660.1| hypothetical protein SeryN2_2443... 42.4 0.022 gi|158314353|ref|YP_001506861.1| hypothetical protein Franean1_2... 42.4 0.023 gi|134100342|ref|YP_001106003.1| hypothetical protein SACE_3807 ... 42.0 0.027 gi|158312424|ref|YP_001504932.1| hypothetical protein Franean1_0... 41.6 0.035 gi|288916227|ref|ZP_06410607.1| hypothetical protein FrEUN1fDRAF... 41.6 0.037 gi|198286000|gb|ACH85562.1| putative ATPase [Actinomyces sp. Lu ... 40.8 0.061 gi|134099276|ref|YP_001104937.1| hypothetical protein SACE_2731 ... 40.8 0.066 gi|291009702|ref|ZP_06567675.1| hypothetical protein SeryN2_3473... 40.8 0.075 gi|291003388|ref|ZP_06561361.1| hypothetical protein SeryN2_0256... 40.8 0.076 gi|134100998|ref|YP_001106659.1| hypothetical protein SACE_4465 ... 39.7 0.13 gi|291300491|ref|YP_003511769.1| hypothetical protein Snas_3005 ... 39.7 0.15 gi|86743049|ref|YP_483449.1| hypothetical protein Francci3_4374 ... 37.7 0.58 gi|336178446|ref|YP_004583821.1| hypothetical protein FsymDg_253... 37.4 0.74 gi|291003392|ref|ZP_06561365.1| hypothetical protein SeryN2_0258... 36.6 1.2 >gi|15839811|ref|NP_334848.1| hypothetical protein MT0438 [Mycobacterium tuberculosis CDC1551] gi|253797348|ref|YP_003030349.1| hypothetical protein TBMG_00425 [Mycobacterium tuberculosis KZN 1435] gi|254230774|ref|ZP_04924101.1| hypothetical protein TBCG_00416 [Mycobacterium tuberculosis C] 30 more sequence titles Length=92 Score = 183 bits (465), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 91/91 (100%), Positives = 91/91 (100%), Gaps = 0/91 (0%) Query 1 MAEKNTRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDW 60 MAEKNTRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDW Sbjct 2 MAEKNTRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDW 61 Query 61 PVALVIATGHILANNHHNRVLEELGEAMEEA 91 PVALVIATGHILANNHHNRVLEELGEAMEEA Sbjct 62 PVALVIATGHILANNHHNRVLEELGEAMEEA 92 >gi|15607565|ref|NP_214938.1| hypothetical protein Rv0424c [Mycobacterium tuberculosis H37Rv] gi|31791602|ref|NP_854095.1| hypothetical protein Mb0432c [Mycobacterium bovis AF2122/97] gi|121636338|ref|YP_976561.1| hypothetical protein BCG_0463c [Mycobacterium bovis BCG str. Pasteur 1173P2] 40 more sequence titles Length=91 Score = 183 bits (465), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 91/91 (100%), Positives = 91/91 (100%), Gaps = 0/91 (0%) Query 1 MAEKNTRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDW 60 MAEKNTRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDW Sbjct 1 MAEKNTRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDW 60 Query 61 PVALVIATGHILANNHHNRVLEELGEAMEEA 91 PVALVIATGHILANNHHNRVLEELGEAMEEA Sbjct 61 PVALVIATGHILANNHHNRVLEELGEAMEEA 91 >gi|289752453|ref|ZP_06511831.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289693040|gb|EFD60469.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length=91 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 90/91 (99%), Positives = 91/91 (100%), Gaps = 0/91 (0%) Query 1 MAEKNTRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDW 60 MAEKNTRRATSQREAVAK+REAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDW Sbjct 1 MAEKNTRRATSQREAVAKVREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDW 60 Query 61 PVALVIATGHILANNHHNRVLEELGEAMEEA 91 PVALVIATGHILANNHHNRVLEELGEAMEEA Sbjct 61 PVALVIATGHILANNHHNRVLEELGEAMEEA 91 >gi|254818954|ref|ZP_05223955.1| hypothetical protein MintA_03461 [Mycobacterium intracellulare ATCC 13950] Length=92 Score = 150 bits (378), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 70/90 (78%), Positives = 80/90 (89%), Gaps = 0/90 (0%) Query 1 MAEKNTRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDW 60 MAEK +RR TSQR+AV KIRE ET V+NLP GQV+IPRPE LAY+GGLAALAA ELIDW Sbjct 2 MAEKKSRRQTSQRDAVEKIREGETFVVNLPAIGQVQIPRPEQLAYFGGLAALAAFELIDW 61 Query 61 PVALVIATGHILANNHHNRVLEELGEAMEE 90 PVA+VIA GH+LA+NHHN++LEELGEAMEE Sbjct 62 PVAVVIAAGHLLASNHHNKLLEELGEAMEE 91 >gi|296167900|ref|ZP_06850081.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896958|gb|EFG76583.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=91 Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 69/91 (76%), Positives = 80/91 (88%), Gaps = 0/91 (0%) Query 1 MAEKNTRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDW 60 MAEK +RR TSQREAV KIRE ET +NLP+ GQ++IPRPE LAY+GGLAALAA ELIDW Sbjct 1 MAEKKSRRGTSQREAVEKIREGETFHVNLPVLGQMEIPRPEQLAYFGGLAALAAFELIDW 60 Query 61 PVALVIATGHILANNHHNRVLEELGEAMEEA 91 PVA+VIA GH LA+NHHN++LEELGEAME+A Sbjct 61 PVAVVIAAGHFLASNHHNKLLEELGEAMEDA 91 >gi|342859085|ref|ZP_08715739.1| hypothetical protein MCOL_09413 [Mycobacterium colombiense CECT 3035] gi|342133326|gb|EGT86529.1| hypothetical protein MCOL_09413 [Mycobacterium colombiense CECT 3035] Length=92 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 71/91 (79%), Positives = 80/91 (88%), Gaps = 0/91 (0%) Query 1 MAEKNTRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDW 60 M EK +RR T+QREAV K+RE ET V+NLP GQV+IPRPE LAY+GGLAALAALELIDW Sbjct 2 MVEKKSRRGTTQREAVQKVREGETFVVNLPAVGQVEIPRPEQLAYFGGLAALAALELIDW 61 Query 61 PVALVIATGHILANNHHNRVLEELGEAMEEA 91 PVALVIA GH LA+NHHN++LEELGEAMEEA Sbjct 62 PVALVIAAGHFLASNHHNKLLEELGEAMEEA 92 >gi|41410012|ref|NP_962848.1| hypothetical protein MAP3914c [Mycobacterium avium subsp. paratuberculosis K-10] gi|118465315|ref|YP_883857.1| hypothetical protein MAV_4730 [Mycobacterium avium 104] gi|254777169|ref|ZP_05218685.1| hypothetical protein MaviaA2_21219 [Mycobacterium avium subsp. avium ATCC 25291] gi|41398845|gb|AAS06464.1| hypothetical protein MAP_3914c [Mycobacterium avium subsp. paratuberculosis K-10] gi|118166602|gb|ABK67499.1| conserved hypothetical protein [Mycobacterium avium 104] Length=92 Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 72/90 (80%), Positives = 80/90 (89%), Gaps = 0/90 (0%) Query 1 MAEKNTRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDW 60 MAEK RR TSQREAV KIRE ET V+NLP GQV+IPRPE LAY+GGLAALAALELIDW Sbjct 2 MAEKKARRGTSQREAVEKIREGETFVVNLPGLGQVEIPRPEQLAYFGGLAALAALELIDW 61 Query 61 PVALVIATGHILANNHHNRVLEELGEAMEE 90 PVA+VIA GH+LA+NHHN++LEELGEAMEE Sbjct 62 PVAVVIAAGHLLASNHHNKILEELGEAMEE 91 >gi|336460345|gb|EGO39245.1| hypothetical protein MAPs_41410 [Mycobacterium avium subsp. paratuberculosis S397] Length=91 Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 72/90 (80%), Positives = 80/90 (89%), Gaps = 0/90 (0%) Query 1 MAEKNTRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDW 60 MAEK RR TSQREAV KIRE ET V+NLP GQV+IPRPE LAY+GGLAALAALELIDW Sbjct 1 MAEKKARRGTSQREAVEKIREGETFVVNLPGLGQVEIPRPEQLAYFGGLAALAALELIDW 60 Query 61 PVALVIATGHILANNHHNRVLEELGEAMEE 90 PVA+VIA GH+LA+NHHN++LEELGEAMEE Sbjct 61 PVAVVIAAGHLLASNHHNKILEELGEAMEE 90 >gi|333989038|ref|YP_004521652.1| hypothetical protein JDM601_0398 [Mycobacterium sp. JDM601] gi|333485006|gb|AEF34398.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=90 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 61/91 (68%), Positives = 74/91 (82%), Gaps = 1/91 (1%) Query 1 MAEKNTRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDW 60 MA+K TRR+ SQREAVA IR+AE + LP+ G+V +PRPE LAYYGGLA LAA E+IDW Sbjct 1 MADK-TRRSASQREAVAHIRDAEGFAVELPLFGKVTVPRPEQLAYYGGLALLAAFEIIDW 59 Query 61 PVALVIATGHILANNHHNRVLEELGEAMEEA 91 PVA +A GHILANNH + VLE+LGEA+E+A Sbjct 60 PVAAAVAAGHILANNHRSEVLEQLGEALEDA 90 >gi|240168899|ref|ZP_04747558.1| hypothetical protein MkanA1_06280 [Mycobacterium kansasii ATCC 12478] Length=92 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/91 (82%), Positives = 82/91 (91%), Gaps = 0/91 (0%) Query 1 MAEKNTRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDW 60 M EK RR TSQREAV KIRE ET V+NLP+ GQ+++PRPE LAYYGGLAALAALELIDW Sbjct 2 MVEKKARRGTSQREAVKKIREGETFVVNLPLVGQLEVPRPEQLAYYGGLAALAALELIDW 61 Query 61 PVALVIATGHILANNHHNRVLEELGEAMEEA 91 PVALVIATGH+LA+NHHNR+LEELGEAMEEA Sbjct 62 PVALVIATGHVLASNHHNRLLEELGEAMEEA 92 >gi|183980763|ref|YP_001849054.1| hypothetical protein MMAR_0739 [Mycobacterium marinum M] gi|183174089|gb|ACC39199.1| conserved hypothetical protein [Mycobacterium marinum M] Length=92 Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 70/91 (77%), Positives = 80/91 (88%), Gaps = 0/91 (0%) Query 1 MAEKNTRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDW 60 M EK RRA SQR+AV KIRE ET V+NLP GQV++PRPE LAYYGGLAALAALELI+W Sbjct 2 MVEKQARRAVSQRDAVKKIREGETFVVNLPFVGQVEVPRPEQLAYYGGLAALAALELIEW 61 Query 61 PVALVIATGHILANNHHNRVLEELGEAMEEA 91 PVA+VIA GH++A+NHHNR+LEELGEAMEEA Sbjct 62 PVAVVIAAGHVMASNHHNRLLEELGEAMEEA 92 >gi|118618882|ref|YP_907214.1| hypothetical protein MUL_3604 [Mycobacterium ulcerans Agy99] gi|118570992|gb|ABL05743.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=92 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/89 (77%), Positives = 78/89 (88%), Gaps = 0/89 (0%) Query 1 MAEKNTRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDW 60 M EK RRA SQR+AV KIRE ET V+NLP GQV++PRPE LAYYGGLAALAALELI+W Sbjct 1 MVEKQARRAVSQRDAVKKIREGETFVVNLPFVGQVEVPRPEQLAYYGGLAALAALELIEW 60 Query 61 PVALVIATGHILANNHHNRVLEELGEAME 89 PVA+VIA GH++A+NHHNR+LEELGEAME Sbjct 61 PVAVVIAAGHVIASNHHNRLLEELGEAME 89 >gi|111018838|ref|YP_701810.1| hypothetical protein RHA1_ro01841 [Rhodococcus jostii RHA1] gi|110818368|gb|ABG93652.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=90 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 45/88 (52%), Positives = 63/88 (72%), Gaps = 0/88 (0%) Query 4 KNTRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDWPVA 63 + T A SQ +AV ++REA + LPI G+V +PRPE LA++ + LAA+E+I+WPVA Sbjct 3 QQTSEAESQSDAVQRVREARGFAVQLPILGRVPLPRPEQLAFFAAIGLLAAVEIIEWPVA 62 Query 64 LVIATGHILANNHHNRVLEELGEAMEEA 91 L IA GHIL + HNR ++E+GEA+E A Sbjct 63 LTIAAGHILITDQHNRAVQEIGEALEGA 90 >gi|226360939|ref|YP_002778717.1| hypothetical protein ROP_15250 [Rhodococcus opacus B4] gi|226239424|dbj|BAH49772.1| hypothetical protein [Rhodococcus opacus B4] Length=102 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 40/86 (47%), Positives = 63/86 (74%), Gaps = 0/86 (0%) Query 4 KNTRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDWPVA 63 ++T A S +AV +++EA + + LPI G++ +PRPE LA++ + LAA+E+I+WPVA Sbjct 15 QSTSGAQSHSDAVQRVQEAHSFAVQLPILGRMPLPRPEQLAFFAAIGLLAAVEIIEWPVA 74 Query 64 LVIATGHILANNHHNRVLEELGEAME 89 L IA GH+L + HNR ++E+GEA+E Sbjct 75 LTIAAGHVLITDQHNRAVQEIGEALE 100 >gi|226307565|ref|YP_002767525.1| hypothetical protein RER_40780 [Rhodococcus erythropolis PR4] gi|226186682|dbj|BAH34786.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=93 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 39/85 (46%), Positives = 54/85 (64%), Gaps = 0/85 (0%) Query 5 NTRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDWPVAL 64 + R R V +R A T + LPI G + +PRPE +AY+ + + A E+I+WPVA+ Sbjct 7 DQRNPVDHRAVVESVRSARTFELELPIVGAIPVPRPEQIAYFAVMGLMVAFEIIEWPVAV 66 Query 65 VIATGHILANNHHNRVLEELGEAME 89 IA GH+LA HN VLEE+GEA+E Sbjct 67 TIAAGHLLATEQHNHVLEEIGEALE 91 >gi|229493808|ref|ZP_04387586.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229319307|gb|EEN85150.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=93 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 37/80 (47%), Positives = 52/80 (65%), Gaps = 0/80 (0%) Query 10 TSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDWPVALVIATG 69 R V +R A + + LPI G + +PRPE +AY+ + + A E+I+WPVA+ IA G Sbjct 12 VDHRAVVESVRSARSFELELPIVGAIPVPRPEQIAYFAVIGLMVAFEIIEWPVAVTIAAG 71 Query 70 HILANNHHNRVLEELGEAME 89 H+LA HN VLEE+GEA+E Sbjct 72 HLLATEQHNHVLEEIGEALE 91 >gi|111020136|ref|YP_703108.1| hypothetical protein RHA1_ro03147 [Rhodococcus jostii RHA1] gi|110819666|gb|ABG94950.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=90 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 45/81 (56%), Positives = 61/81 (76%), Gaps = 0/81 (0%) Query 11 SQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDWPVALVIATGH 70 S R+ V ++R A++ +NLPI G V IPRPEHLA+Y L ALAALE+I+WPVA +IA GH Sbjct 10 SHRDTVERVRHADSFAVNLPIVGSVGIPRPEHLAFYAALGALAALEIIEWPVAAIIAAGH 69 Query 71 ILANNHHNRVLEELGEAMEEA 91 ++A H+R L E+G+A+E A Sbjct 70 VMAAEKHHRALHEIGDALESA 90 >gi|296167304|ref|ZP_06849706.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897248|gb|EFG76852.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=96 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 40/74 (55%), Positives = 60/74 (82%), Gaps = 0/74 (0%) Query 18 KIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDWPVALVIATGHILANNHH 77 +IREAET+ +++PI G+V++P +HLA+YGGLAALAAL++++WP+ALV+ G LA + H Sbjct 23 RIREAETVRLHIPIIGRVRVPHVDHLAFYGGLAALAALQILEWPMALVLGAGQALAESQH 82 Query 78 NRVLEELGEAMEEA 91 NRV+ G+A+ EA Sbjct 83 NRVVRGFGDALTEA 96 >gi|302528643|ref|ZP_07280985.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302437538|gb|EFL09354.1| conserved hypothetical protein [Streptomyces sp. AA4] Length=91 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 31/71 (44%), Positives = 52/71 (74%), Gaps = 0/71 (0%) Query 21 EAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDWPVALVIATGHILANNHHNRV 80 E ++ ++LP+ G+V +P P+ LAY+GG+ L AL+LI+WPV++ +A GH+LA + ++ Sbjct 21 ENNSLQVSLPLVGKVSLPPPQQLAYFGGIGVLTALQLIEWPVSVALAAGHVLATSSGDKS 80 Query 81 LEELGEAMEEA 91 L GEA+E+A Sbjct 81 LRAFGEALEDA 91 >gi|238061927|ref|ZP_04606636.1| hypothetical protein MCAG_02893 [Micromonospora sp. ATCC 39149] gi|237883738|gb|EEP72566.1| hypothetical protein MCAG_02893 [Micromonospora sp. ATCC 39149] Length=108 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 32/65 (50%), Positives = 49/65 (76%), Gaps = 0/65 (0%) Query 27 MNLPICGQVKIPRPEHLAYYGGLAALAALELIDWPVALVIATGHILANNHHNRVLEELGE 86 M +P+ G+V +P P+ +AYY GL LAAL++I+WP+ALVI GH+LA+ H + + + +GE Sbjct 44 MEVPMLGEVAVPPPDKVAYYAGLGVLAALQIIEWPLALVITAGHLLADQHLSGLAKGIGE 103 Query 87 AMEEA 91 A+E A Sbjct 104 ALESA 108 >gi|291007444|ref|ZP_06565417.1| hypothetical protein SeryN2_23213 [Saccharopolyspora erythraea NRRL 2338] Length=79 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 33/65 (51%), Positives = 43/65 (67%), Gaps = 0/65 (0%) Query 27 MNLPICGQVKIPRPEHLAYYGGLAALAALELIDWPVALVIATGHILANNHHNRVLEELGE 86 + LP+ G V +P P+ LA+ G+ ALA LI WPV L I GH+LA+N H R+L GE Sbjct 15 VRLPVAGTVSLPPPDELAFLAGMVALATAGLITWPVTLTIGAGHLLAHNKHMRLLRSFGE 74 Query 87 AMEEA 91 A+EEA Sbjct 75 ALEEA 79 >gi|325673698|ref|ZP_08153389.1| hypothetical protein HMPREF0724_11171 [Rhodococcus equi ATCC 33707] gi|325555719|gb|EGD25390.1| hypothetical protein HMPREF0724_11171 [Rhodococcus equi ATCC 33707] Length=114 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/81 (51%), Positives = 54/81 (67%), Gaps = 0/81 (0%) Query 11 SQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDWPVALVIATGH 70 S R+A+ +I + + LP+ G V +P+PE LAY G L LAA E+IDWPVAL IA GH Sbjct 34 SHRDALERIAQGSRFAIRLPLIGDVGVPKPEQLAYLGALGLLAAFEVIDWPVALAIAVGH 93 Query 71 ILANNHHNRVLEELGEAMEEA 91 LA + +R L E+GEA+E A Sbjct 94 ALAEDQRHRALREVGEALESA 114 >gi|145592584|ref|YP_001156881.1| hypothetical protein Strop_0018 [Salinispora tropica CNB-440] gi|145301921|gb|ABP52503.1| hypothetical protein Strop_0018 [Salinispora tropica CNB-440] Length=100 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 34/86 (40%), Positives = 54/86 (63%), Gaps = 4/86 (4%) Query 6 TRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDWPVALV 65 TR + R+ + T + +P+ G++ IP P+ LAYY G+ L L++I+WPVALV Sbjct 19 TRDLSGSRDMIRTF----THRVEVPVLGEMAIPPPDKLAYYAGVGLLTLLQVIEWPVALV 74 Query 66 IATGHILANNHHNRVLEELGEAMEEA 91 + GH+LA+ H + + + LGEA+E A Sbjct 75 VTAGHVLADQHLSGLAKGLGEALETA 100 >gi|159035696|ref|YP_001534949.1| hypothetical protein Sare_0022 [Salinispora arenicola CNS-205] gi|157914531|gb|ABV95958.1| conserved hypothetical protein [Salinispora arenicola CNS-205] Length=105 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 34/86 (40%), Positives = 54/86 (63%), Gaps = 4/86 (4%) Query 6 TRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDWPVALV 65 TR + R+ + T + +P+ G+V IP P+ LAYY G+ L L++I+WP+ALV Sbjct 24 TRELSGGRDMIRTF----THRVEVPMLGEVAIPPPDKLAYYAGVGLLTLLQVIEWPIALV 79 Query 66 IATGHILANNHHNRVLEELGEAMEEA 91 + GH+LA+ H + + + +GEAME A Sbjct 80 VTAGHLLADQHLSGLAKGVGEAMETA 105 >gi|312139025|ref|YP_004006361.1| hypothetical protein REQ_15990 [Rhodococcus equi 103S] gi|311888364|emb|CBH47676.1| hypothetical protein REQ_15990 [Rhodococcus equi 103S] Length=114 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 41/81 (51%), Positives = 54/81 (67%), Gaps = 0/81 (0%) Query 11 SQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDWPVALVIATGH 70 S R+A+ +I + + LP+ G V +P+PE LAY G L LAA E+IDWPVAL IA GH Sbjct 34 SHRDALERIAQGSRFAIRLPLIGDVGVPKPEQLAYLGALGLLAAFEVIDWPVALAIAVGH 93 Query 71 ILANNHHNRVLEELGEAMEEA 91 LA + +R L E+GEA+E A Sbjct 94 ALAEDQRHRALCEVGEALESA 114 >gi|120402656|ref|YP_952485.1| hypothetical protein Mvan_1650 [Mycobacterium vanbaalenii PYR-1] gi|119955474|gb|ABM12479.1| hypothetical protein Mvan_1650 [Mycobacterium vanbaalenii PYR-1] Length=161 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 30/78 (39%), Positives = 45/78 (58%), Gaps = 0/78 (0%) Query 1 MAEKNTRRATSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDW 60 M +K S +A ++EAE + LPI G++ +P P+ LA++G L ALAAL I+W Sbjct 1 MFDKARSFVASHHDASELVKEAEKFSVRLPIVGRIAVPPPDQLAFFGVLGALAALGAIEW 60 Query 61 PVALVIATGHILANNHHN 78 PVA I G ++ + H Sbjct 61 PVAAAIGVGQVVVSRHFG 78 >gi|126433901|ref|YP_001069592.1| hypothetical protein Mjls_1299 [Mycobacterium sp. JLS] gi|126233701|gb|ABN97101.1| hypothetical protein Mjls_1299 [Mycobacterium sp. JLS] Length=147 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 28/69 (41%), Positives = 41/69 (60%), Gaps = 0/69 (0%) Query 10 TSQREAVAKIREAETIVMNLPICGQVKIPRPEHLAYYGGLAALAALELIDWPVALVIATG 69 +S R+A +R A+ + LP+ GQV +P P+ LA+YG L LA + I+WPVA+ I G Sbjct 10 SSHRDASELVRRAQRFSVRLPLIGQVTVPPPDQLAFYGVLGVLAGVGAIEWPVAVAIGVG 69 Query 70 HILANNHHN 78 + H N Sbjct 70 QAVVARHVN 78 >gi|345011839|ref|YP_004814193.1| hypothetical protein Strvi_4262 [Streptomyces violaceusniger Tu 4113] gi|344038188|gb|AEM83913.1| hypothetical protein Strvi_4262 [Streptomyces violaceusniger Tu 4113] Length=107 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 28/57 (50%), Positives = 40/57 (71%), Gaps = 0/57 (0%) Query 34 QVKIPRPEHLAYYGGLAALAALELIDWPVALVIATGHILANNHHNRVLEELGEAMEE 90 +V++P E L + G+ LAA+E+I+WPVA IA GH LA++ H + L E GEA+EE Sbjct 50 RVELPSEEQLCFLAGVGLLAAVEVIEWPVAAAIAIGHGLAHSQHGKALREFGEALEE 106 >gi|296269646|ref|YP_003652278.1| hypothetical protein Tbis_1672 [Thermobispora bispora DSM 43833] gi|296092433|gb|ADG88385.1| hypothetical protein Tbis_1672 [Thermobispora bispora DSM 43833] Length=166 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 21/43 (49%), Positives = 28/43 (66%), Gaps = 0/43 (0%) Query 37 IPRPEHLAYYGGLAALAALELIDWPVALVIATGHILANNHHNR 79 +P PE + YYGGLAA+AA +IDWP+A I G ++A R Sbjct 78 LPPPERMLYYGGLAAIAAFGVIDWPIAAAIGAGTMIAQRARAR 120 >gi|134098097|ref|YP_001103758.1| hypothetical protein SACE_1511 [Saccharopolyspora erythraea NRRL 2338] gi|133910720|emb|CAM00833.1| hypothetical protein SACE_1511 [Saccharopolyspora erythraea NRRL 2338] Length=40 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 22/40 (55%), Positives = 27/40 (68%), Gaps = 0/40 (0%) Query 52 LAALELIDWPVALVIATGHILANNHHNRVLEELGEAMEEA 91 +A LI WPV L I GH+LA+N H R+L GEA+EEA Sbjct 1 MATAGLITWPVTLTIGAGHLLAHNKHMRLLRSFGEALEEA 40 >gi|111223714|ref|YP_714508.1| hypothetical protein FRAAL4316 [Frankia alni ACN14a] gi|111151246|emb|CAJ62958.1| hypothetical protein FRAAL4316 [Frankia alni ACN14a] Length=183 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 22/44 (50%), Positives = 28/44 (64%), Gaps = 0/44 (0%) Query 32 CGQVKIPRPEHLAYYGGLAALAALELIDWPVALVIATGHILANN 75 G + +P P AYY GL LA +ELI+WPVAL IA G +A + Sbjct 45 VGPLSLPSPGRTAYYLGLGTLAVVELIEWPVALAIAAGTYVAGH 88 >gi|271962975|ref|YP_003337171.1| hypothetical protein Sros_1434 [Streptosporangium roseum DSM 43021] gi|270506150|gb|ACZ84428.1| hypothetical protein Sros_1434 [Streptosporangium roseum DSM 43021] Length=228 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/39 (52%), Positives = 25/39 (65%), Gaps = 0/39 (0%) Query 37 IPRPEHLAYYGGLAALAALELIDWPVALVIATGHILANN 75 +P PE L YYGGL ALA + I+WPVA I G ++A Sbjct 95 LPPPERLIYYGGLGALAVVGAIEWPVAAAIGVGTLVAQR 133 >gi|336179862|ref|YP_004585237.1| hypothetical protein FsymDg_4043 [Frankia symbiont of Datisca glomerata] gi|334860842|gb|AEH11316.1| hypothetical protein FsymDg_4043 [Frankia symbiont of Datisca glomerata] Length=92 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 26/51 (51%), Positives = 34/51 (67%), Gaps = 0/51 (0%) Query 41 EHLAYYGGLAALAALELIDWPVALVIATGHILANNHHNRVLEELGEAMEEA 91 E L Y+ GLAAL L +I+WPVA V+A GH +A H + L LG A++EA Sbjct 42 EQLGYFAGLAALGLLGIIEWPVAAVVAGGHTIAYRSHRQGLRNLGVALQEA 92 >gi|158314297|ref|YP_001506805.1| hypothetical protein Franean1_2467 [Frankia sp. EAN1pec] gi|158109702|gb|ABW11899.1| hypothetical protein Franean1_2467 [Frankia sp. EAN1pec] Length=358 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 19/37 (52%), Positives = 26/37 (71%), Gaps = 0/37 (0%) Query 33 GQVKIPRPEHLAYYGGLAALAALELIDWPVALVIATG 69 G + +P + AYY GL ALAA+E+I+WP+A IA G Sbjct 297 GPLALPSAKQTAYYAGLGALAAVEIIEWPIAAAIAAG 333 >gi|302528644|ref|ZP_07280986.1| predicted protein [Streptomyces sp. AA4] gi|302437539|gb|EFL09355.1| predicted protein [Streptomyces sp. AA4] Length=109 Score = 42.7 bits (99), Expect = 0.020, Method: Compositional matrix adjust. Identities = 19/41 (47%), Positives = 30/41 (74%), Gaps = 2/41 (4%) Query 35 VKIPR--PEHLAYYGGLAALAALELIDWPVALVIATGHILA 73 VK+P P+ ++GGLAALAA+ +++WPVA+V+ G +A Sbjct 53 VKVPGDLPKRALWWGGLAALAAVGVLEWPVAVVVGAGSYVA 93 >gi|134098016|ref|YP_001103677.1| hypothetical protein SACE_1430 [Saccharopolyspora erythraea NRRL 2338] gi|291007219|ref|ZP_06565192.1| hypothetical protein SeryN2_22082 [Saccharopolyspora erythraea NRRL 2338] gi|133910639|emb|CAM00752.1| hypothetical protein SACE_1430 [Saccharopolyspora erythraea NRRL 2338] Length=91 Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust. Identities = 18/38 (48%), Positives = 24/38 (64%), Gaps = 0/38 (0%) Query 37 IPRPEHLAYYGGLAALAALELIDWPVALVIATGHILAN 74 +P +A+YGGL ALAA +I+WPVA I G +A Sbjct 44 LPSGRTMAFYGGLGALAAFSMIEWPVAAAIGLGVAVAQ 81 >gi|291007687|ref|ZP_06565660.1| hypothetical protein SeryN2_24439 [Saccharopolyspora erythraea NRRL 2338] Length=70 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 17/37 (46%), Positives = 23/37 (63%), Gaps = 0/37 (0%) Query 36 KIPRPEHLAYYGGLAALAALELIDWPVALVIATGHIL 72 ++P P A+YG L AAL +I+WPVAL I G + Sbjct 17 RLPSPGQAAFYGALGLGAALSVIEWPVALAIGAGTAM 53 >gi|158314353|ref|YP_001506861.1| hypothetical protein Franean1_2524 [Frankia sp. EAN1pec] gi|158314902|ref|YP_001507410.1| hypothetical protein Franean1_3092 [Frankia sp. EAN1pec] gi|158109758|gb|ABW11955.1| hypothetical protein Franean1_2524 [Frankia sp. EAN1pec] gi|158110307|gb|ABW12504.1| hypothetical protein Franean1_3092 [Frankia sp. EAN1pec] Length=140 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 22/47 (47%), Positives = 27/47 (58%), Gaps = 2/47 (4%) Query 33 GQVKIPRPEHLAYYGGLAALAALELIDWPVALVIATGHILANNHHNR 79 G V +P P AYY GL LA E+++WPVA IA G +A H R Sbjct 73 GPVGLPSPGKSAYYLGLGVLAVGEVVEWPVAAAIAAGTYVAQ--HTR 117 >gi|134100342|ref|YP_001106003.1| hypothetical protein SACE_3807 [Saccharopolyspora erythraea NRRL 2338] gi|133912965|emb|CAM03078.1| hypothetical protein SACE_3807 [Saccharopolyspora erythraea NRRL 2338] Length=72 Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust. Identities = 17/37 (46%), Positives = 23/37 (63%), Gaps = 0/37 (0%) Query 36 KIPRPEHLAYYGGLAALAALELIDWPVALVIATGHIL 72 ++P P A+YG L AAL +I+WPVAL I G + Sbjct 19 RLPSPGQAAFYGALGLGAALSVIEWPVALAIGAGTAM 55 >gi|158312424|ref|YP_001504932.1| hypothetical protein Franean1_0567 [Frankia sp. EAN1pec] gi|158107829|gb|ABW10026.1| hypothetical protein Franean1_0567 [Frankia sp. EAN1pec] Length=145 Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust. Identities = 20/52 (39%), Positives = 29/52 (56%), Gaps = 0/52 (0%) Query 33 GQVKIPRPEHLAYYGGLAALAALELIDWPVALVIATGHILANNHHNRVLEEL 84 G + +P P AYY GL LA E+I+WPV IA G +A + +++L Sbjct 77 GPMTLPPPGKTAYYVGLGLLAVTEVIEWPVVAAIAAGTYVAQHTGTPRVDQL 128 >gi|288916227|ref|ZP_06410607.1| hypothetical protein FrEUN1fDRAFT_0300 [Frankia sp. EUN1f] gi|288352418|gb|EFC86615.1| hypothetical protein FrEUN1fDRAFT_0300 [Frankia sp. EUN1f] Length=97 Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust. Identities = 20/43 (47%), Positives = 26/43 (61%), Gaps = 0/43 (0%) Query 33 GQVKIPRPEHLAYYGGLAALAALELIDWPVALVIATGHILANN 75 G V IP + AYY GL LAA+E I+WP+A +A G +A Sbjct 46 GPVPIPSAKMTAYYIGLGTLAAVEAIEWPIAAALAVGSYVAQR 88 >gi|198286000|gb|ACH85562.1| putative ATPase [Actinomyces sp. Lu 9419] Length=543 Score = 40.8 bits (94), Expect = 0.061, Method: Compositional matrix adjust. Identities = 17/37 (46%), Positives = 24/37 (65%), Gaps = 0/37 (0%) Query 36 KIPRPEHLAYYGGLAALAALELIDWPVALVIATGHIL 72 ++P + L +YGGL A AA +I+WPVA I G+ L Sbjct 60 QLPSGDQLLFYGGLTAAAAFSIIEWPVAAAIGIGNAL 96 >gi|134099276|ref|YP_001104937.1| hypothetical protein SACE_2731 [Saccharopolyspora erythraea NRRL 2338] gi|133911899|emb|CAM02012.1| hypothetical protein SACE_2731 [Saccharopolyspora erythraea NRRL 2338] Length=95 Score = 40.8 bits (94), Expect = 0.066, Method: Compositional matrix adjust. Identities = 17/39 (44%), Positives = 24/39 (62%), Gaps = 0/39 (0%) Query 37 IPRPEHLAYYGGLAALAALELIDWPVALVIATGHILANN 75 +P + + +YGGL ALAA +++ WPVA I G LA Sbjct 37 LPSGKSMIFYGGLGALAAFDVLAWPVAAAIGVGTALAQQ 75 >gi|291009702|ref|ZP_06567675.1| hypothetical protein SeryN2_34735 [Saccharopolyspora erythraea NRRL 2338] Length=92 Score = 40.8 bits (94), Expect = 0.075, Method: Compositional matrix adjust. Identities = 17/39 (44%), Positives = 24/39 (62%), Gaps = 0/39 (0%) Query 37 IPRPEHLAYYGGLAALAALELIDWPVALVIATGHILANN 75 +P + + +YGGL ALAA +++ WPVA I G LA Sbjct 34 LPSGKSMIFYGGLGALAAFDVLAWPVAAAIGVGTALAQQ 72 >gi|291003388|ref|ZP_06561361.1| hypothetical protein SeryN2_02562 [Saccharopolyspora erythraea NRRL 2338] Length=107 Score = 40.8 bits (94), Expect = 0.076, Method: Compositional matrix adjust. Identities = 16/40 (40%), Positives = 23/40 (58%), Gaps = 0/40 (0%) Query 36 KIPRPEHLAYYGGLAALAALELIDWPVALVIATGHILANN 75 ++P + +YGGL ALA +++ WPVA I G LA Sbjct 48 RLPSGRSMVFYGGLGALAVFDVLAWPVAAAIGVGTALAQQ 87 >gi|134100998|ref|YP_001106659.1| hypothetical protein SACE_4465 [Saccharopolyspora erythraea NRRL 2338] gi|133913621|emb|CAM03734.1| hypothetical protein SACE_4465 [Saccharopolyspora erythraea NRRL 2338] Length=92 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 16/40 (40%), Positives = 23/40 (58%), Gaps = 0/40 (0%) Query 36 KIPRPEHLAYYGGLAALAALELIDWPVALVIATGHILANN 75 ++P + +YGGL ALA +++ WPVA I G LA Sbjct 33 RLPSGRSMVFYGGLGALAVFDVLAWPVAAAIGVGTALAQQ 72 >gi|291300491|ref|YP_003511769.1| hypothetical protein Snas_3005 [Stackebrandtia nassauensis DSM 44728] gi|290569711|gb|ADD42676.1| hypothetical protein Snas_3005 [Stackebrandtia nassauensis DSM 44728] Length=84 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 15/28 (54%), Positives = 19/28 (68%), Gaps = 0/28 (0%) Query 36 KIPRPEHLAYYGGLAALAALELIDWPVA 63 ++P HLAYY GLA LAA ++ WP A Sbjct 54 QLPDKRHLAYYAGLAGLAAFGVMSWPTA 81 >gi|86743049|ref|YP_483449.1| hypothetical protein Francci3_4374 [Frankia sp. CcI3] gi|86569911|gb|ABD13720.1| hypothetical protein Francci3_4374 [Frankia sp. CcI3] Length=133 Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust. Identities = 19/36 (53%), Positives = 22/36 (62%), Gaps = 2/36 (5%) Query 44 AYYGGLAALAALELIDWPVALVIATGHILANNHHNR 79 AYY GL LAA +I+WPVA IA G +A H R Sbjct 75 AYYLGLGGLAAASIIEWPVAAAIAAGTYVA--QHTR 108 >gi|336178446|ref|YP_004583821.1| hypothetical protein FsymDg_2536 [Frankia symbiont of Datisca glomerata] gi|334859426|gb|AEH09900.1| hypothetical protein FsymDg_2536 [Frankia symbiont of Datisca glomerata] Length=168 Score = 37.4 bits (85), Expect = 0.74, Method: Compositional matrix adjust. Identities = 13/31 (42%), Positives = 20/31 (65%), Gaps = 0/31 (0%) Query 32 CGQVKIPRPEHLAYYGGLAALAALELIDWPV 62 G +++P P A+Y GL LA E+++WPV Sbjct 107 VGPIRLPSPTQTAFYVGLGVLAVTEVVEWPV 137 >gi|291003392|ref|ZP_06561365.1| hypothetical protein SeryN2_02582 [Saccharopolyspora erythraea NRRL 2338] Length=99 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 0/25 (0%) Query 37 IPRPEHLAYYGGLAALAALELIDWP 61 +P P + +YG L ALA LE+++WP Sbjct 49 LPSPRMMVFYGALGALAVLEMVEWP 73 Lambda K H 0.318 0.132 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 128725229700 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40