BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0432
Length=240
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607573|ref|NP_214946.1| periplasmic superoxide dismutase [C... 477 5e-133
gi|340625457|ref|YP_004743909.1| putative periplasmic superoxide... 475 2e-132
gi|51247211|pdb|1PZS|A Chain A, Crystal Structure Of A Cu-Zn Sup... 415 3e-114
gi|15828035|ref|NP_302298.1| superoxide dismutase precursor (Cu-... 343 1e-92
gi|296167943|ref|ZP_06850087.1| copper/zinc superoxide dismutase... 332 4e-89
gi|240168907|ref|ZP_04747566.1| putative periplasmic Cu-Zn-super... 325 3e-87
gi|118466410|ref|YP_883849.1| superoxide dismutase, Cu-Zn [Mycob... 324 6e-87
gi|41410019|ref|NP_962855.1| SodC [Mycobacterium avium subsp. pa... 324 6e-87
gi|13357194|gb|AAK20038.1|AF326234_1 copper zinc superoxide dism... 322 4e-86
gi|254818946|ref|ZP_05223947.1| superoxide dismutase, Cu-Zn [Myc... 321 5e-86
gi|183980771|ref|YP_001849062.1| periplasmic superoxide dismutas... 311 4e-83
gi|118617063|ref|YP_905395.1| periplasmic superoxide dismutase [... 307 8e-82
gi|118473568|ref|YP_885239.1| copper/zinc superoxide dismutase [... 293 2e-77
gi|342859077|ref|ZP_08715731.1| superoxide dismutase, Cu-Zn [Myc... 285 4e-75
gi|333989046|ref|YP_004521660.1| periplasmic superoxide dismutas... 281 5e-74
gi|108797552|ref|YP_637749.1| copper/zinc binding superoxide dis... 279 2e-73
gi|120401750|ref|YP_951579.1| superoxide dismutase, copper/zinc ... 275 4e-72
gi|145220777|ref|YP_001131455.1| copper/zinc binding superoxide ... 270 1e-70
gi|169631262|ref|YP_001704911.1| superoxide dismutase [Mycobacte... 266 2e-69
gi|59805011|gb|AAX08101.1| copper/zinc superoxide dismutase [Rho... 231 8e-59
gi|325673959|ref|ZP_08153649.1| copper/zinc superoxide dismutase... 231 8e-59
gi|312141211|ref|YP_004008547.1| superoxide dismutase soda4 [Rho... 230 1e-58
gi|41408229|ref|NP_961065.1| hypothetical protein MAP2131c [Myco... 229 3e-58
gi|342857480|ref|ZP_08714136.1| hypothetical protein MCOL_01350 ... 221 5e-56
gi|111019166|ref|YP_702138.1| superoxide dismutase [Rhodococcus ... 221 9e-56
gi|226361303|ref|YP_002779081.1| superoxide dismutase [Rhodococc... 220 2e-55
gi|226304984|ref|YP_002764942.1| superoxide dismutase [Rhodococc... 219 3e-55
gi|118465876|ref|YP_881261.1| [Cu-Zn] superoxide dismutase [Myco... 218 4e-55
gi|240167819|ref|ZP_04746478.1| copper/zinc superoxide dismutase... 217 1e-54
gi|254819372|ref|ZP_05224373.1| hypothetical protein MintA_05580... 214 8e-54
gi|296166324|ref|ZP_06848761.1| copper/zinc superoxide dismutase... 208 6e-52
gi|54027272|ref|YP_121514.1| putative superoxide dismutase [Noca... 202 3e-50
gi|229493704|ref|ZP_04387488.1| copper/zinc superoxide dismutase... 199 2e-49
gi|336461677|gb|EGO40540.1| Cu/Zn superoxide dismutase [Mycobact... 193 1e-47
gi|254776792|ref|ZP_05218308.1| superoxide dismutase, Cu-Zn [Myc... 173 2e-41
gi|118464546|ref|YP_883497.1| superoxide dismutase, Cu-Zn [Mycob... 173 2e-41
gi|41410370|ref|NP_963206.1| hypothetical protein MAP4272c [Myco... 173 2e-41
gi|342861906|ref|ZP_08718551.1| superoxide dismutase, Cu-Zn [Myc... 171 6e-41
gi|296141402|ref|YP_003648645.1| superoxide dismutase copper/zin... 168 7e-40
gi|296393250|ref|YP_003658134.1| superoxide dismutase copper/zin... 167 1e-39
gi|296168778|ref|ZP_06850464.1| copper/zinc superoxide dismutase... 166 3e-39
gi|317506341|ref|ZP_07964153.1| copper/zinc superoxide dismutase... 160 2e-37
gi|333918228|ref|YP_004491809.1| Superoxide dismutase [Amycolici... 154 1e-35
gi|126436993|ref|YP_001072684.1| copper/zinc binding superoxide ... 143 3e-32
gi|108801159|ref|YP_641356.1| copper/zinc binding superoxide dis... 143 3e-32
gi|343925512|ref|ZP_08765031.1| superoxide dismutase [Gordonia a... 141 6e-32
gi|254823106|ref|ZP_05228107.1| superoxide dismutase, Cu-Zn [Myc... 141 8e-32
gi|259507871|ref|ZP_05750771.1| superoxide dismutase [Corynebact... 136 3e-30
gi|25028806|ref|NP_738860.1| putative superoxide dismutase [Cory... 136 3e-30
gi|262200674|ref|YP_003271882.1| superoxide dismutase copper/zin... 134 1e-29
>gi|15607573|ref|NP_214946.1| periplasmic superoxide dismutase [Cu-Zn] SodC [Mycobacterium
tuberculosis H37Rv]
gi|15839819|ref|NP_334856.1| superoxide dismutase [Mycobacterium tuberculosis CDC1551]
gi|31791610|ref|NP_854103.1| periplasmic superoxide dismutase [Cu-Zn] SodC [Mycobacterium
bovis AF2122/97]
80 more sequence titles
Length=240
Score = 477 bits (1228), Expect = 5e-133, Method: Compositional matrix adjust.
Identities = 240/240 (100%), Positives = 240/240 (100%), Gaps = 0/240 (0%)
Query 1 MPKPADHRNHAAVSTSVLSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLS 60
MPKPADHRNHAAVSTSVLSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLS
Sbjct 1 MPKPADHRNHAAVSTSVLSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLS 60
Query 61 GHDEESPGAQSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQV 120
GHDEESPGAQSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQV
Sbjct 61 GHDEESPGAQSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQV 120
Query 121 GKCEPNSVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFT 180
GKCEPNSVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFT
Sbjct 121 GKCEPNSVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFT 180
Query 181 MDDLLSGAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG 240
MDDLLSGAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG
Sbjct 181 MDDLLSGAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG 240
>gi|340625457|ref|YP_004743909.1| putative periplasmic superoxide dismutase [Cu-Zn] SODC [Mycobacterium
canettii CIPT 140010059]
gi|340003647|emb|CCC42770.1| putative periplasmic superoxide dismutase [Cu-Zn] SODC [Mycobacterium
canettii CIPT 140010059]
Length=240
Score = 475 bits (1223), Expect = 2e-132, Method: Compositional matrix adjust.
Identities = 238/240 (99%), Positives = 240/240 (100%), Gaps = 0/240 (0%)
Query 1 MPKPADHRNHAAVSTSVLSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLS 60
MPKPADHRNHAAVSTSVLSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLS
Sbjct 1 MPKPADHRNHAAVSTSVLSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLS 60
Query 61 GHDEESPGAQSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQV 120
GHDEESPGAQSLTSTLTAPDGTKVATAKFEFANGYAT+TIATTGVG+LTPGFHGLHIHQV
Sbjct 61 GHDEESPGAQSLTSTLTAPDGTKVATAKFEFANGYATITIATTGVGQLTPGFHGLHIHQV 120
Query 121 GKCEPNSVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFT 180
GKCEPNSVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFT
Sbjct 121 GKCEPNSVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFT 180
Query 181 MDDLLSGAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG 240
MDDLLSGAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG
Sbjct 181 MDDLLSGAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG 240
>gi|51247211|pdb|1PZS|A Chain A, Crystal Structure Of A Cu-Zn Superoxide Dismutase From
Mycobacterium Tuberculosis At 1.63 Resolution
Length=208
Score = 415 bits (1067), Expect = 3e-114, Method: Compositional matrix adjust.
Identities = 208/208 (100%), Positives = 208/208 (100%), Gaps = 0/208 (0%)
Query 33 CSSPQHASTVPGTTPSIWTGSPAPSGLSGHDEESPGAQSLTSTLTAPDGTKVATAKFEFA 92
CSSPQHASTVPGTTPSIWTGSPAPSGLSGHDEESPGAQSLTSTLTAPDGTKVATAKFEFA
Sbjct 1 CSSPQHASTVPGTTPSIWTGSPAPSGLSGHDEESPGAQSLTSTLTAPDGTKVATAKFEFA 60
Query 93 NGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNFLSAGGHYHVPGHTG 152
NGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNFLSAGGHYHVPGHTG
Sbjct 61 NGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNFLSAGGHYHVPGHTG 120
Query 153 TPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGADNFANIPPERYVQV 212
TPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGADNFANIPPERYVQV
Sbjct 121 TPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGADNFANIPPERYVQV 180
Query 213 NGTPGPDETTLTTGDAGKRVACGVIGSG 240
NGTPGPDETTLTTGDAGKRVACGVIGSG
Sbjct 181 NGTPGPDETTLTTGDAGKRVACGVIGSG 208
>gi|15828035|ref|NP_302298.1| superoxide dismutase precursor (Cu-Zn) [Mycobacterium leprae
TN]
gi|221230512|ref|YP_002503928.1| superoxide dismutase precursor (Cu-Zn) [Mycobacterium leprae
Br4923]
gi|22654105|sp|Q9CBI6.1|SODC_MYCLE RecName: Full=Superoxide dismutase [Cu-Zn]; Flags: Precursor
gi|13093588|emb|CAC30880.1| superoxide dismutase precursor (Cu-Zn) [Mycobacterium leprae]
gi|219933619|emb|CAR72022.1| superoxide dismutase precursor (Cu-Zn) [Mycobacterium leprae
Br4923]
Length=240
Score = 343 bits (880), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 172/239 (72%), Positives = 197/239 (83%), Gaps = 0/239 (0%)
Query 1 MPKPADHRNHAAVSTSVLSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLS 60
M K A HRN AAV+ S LS F+ A ALLSAC Q +T+PGTTP++WTGSPAPSG+
Sbjct 1 MSKLAGHRNVAAVTRSALSLSFVAACVALLSACIQNQPPATLPGTTPTVWTGSPAPSGML 60
Query 61 GHDEESPGAQSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQV 120
G + ES G ++ + L APDGT+VATAKFEF NG+AT+TIATTGVG L PGFHG+HIH+V
Sbjct 61 GAEAESMGPPNIITRLNAPDGTQVATAKFEFNNGFATITIATTGVGHLAPGFHGVHIHKV 120
Query 121 GKCEPNSVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFT 180
GKCEP+S PTGGAPG+FLSAGGH+ VPGHT PASG+L SLQVR DG LVTTTDAFT
Sbjct 121 GKCEPSSAGPTGGAPGDFLSAGGHFQVPGHTVEPASGNLTSLQVRKDGIGTLVTTTDAFT 180
Query 181 MDDLLSGAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGS 239
M+DLL+G KTAIIIHAGADNF NIPPERY QVNGTPGPD TT++TGDAGKRVACGVIG+
Sbjct 181 MNDLLAGQKTAIIIHAGADNFGNIPPERYSQVNGTPGPDATTISTGDAGKRVACGVIGA 239
>gi|296167943|ref|ZP_06850087.1| copper/zinc superoxide dismutase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896933|gb|EFG76559.1| copper/zinc superoxide dismutase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=239
Score = 332 bits (850), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 172/243 (71%), Positives = 195/243 (81%), Gaps = 7/243 (2%)
Query 1 MPKPADHRNHAAVSTSVLSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGL- 59
MP+ A HR AAV+ S LSA A A+L ACSSPQHAS+ PGTTP++WTGSPAP+
Sbjct 1 MPQLAGHRT-AAVTVSALSA---AACVAVLGACSSPQHASSSPGTTPAVWTGSPAPAEAG 56
Query 60 --SGHDEESPGAQSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHI 117
G +P S+ + L APDGT+VATA F+F NGYATVTI TT G LTPGFHG+HI
Sbjct 57 TPEGGPVAAPSGPSVVTHLKAPDGTQVATATFQFNNGYATVTIETTANGVLTPGFHGVHI 116
Query 118 HQVGKCEPNSVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTD 177
H+VGKCEPNSVAPTGGAPG+FLSAGGH+ PGH PASGDL SLQVR DGS ML+TTTD
Sbjct 117 HKVGKCEPNSVAPTGGAPGDFLSAGGHFQAPGHAAEPASGDLTSLQVRKDGSGMLMTTTD 176
Query 178 AFTMDDLLSGAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVI 237
AF MDDL++G KTAIIIHAGADNFANIPPERY Q NGTPGPD+TT++TGDAGKRVACGVI
Sbjct 177 AFAMDDLMTGEKTAIIIHAGADNFANIPPERYSQSNGTPGPDQTTMSTGDAGKRVACGVI 236
Query 238 GSG 240
G+G
Sbjct 237 GAG 239
>gi|240168907|ref|ZP_04747566.1| putative periplasmic Cu-Zn-superoxide dismutase [Mycobacterium
kansasii ATCC 12478]
Length=236
Score = 325 bits (833), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 173/214 (81%), Positives = 186/214 (87%), Gaps = 1/214 (0%)
Query 28 ALLSACSSPQHASTVPGTTPSIWTGSPAPSGLSGHDEESPGAQSLTSTLTAPDGTKVATA 87
AL+SACSSPQHAST PGTTPSIWTGSPAPS +GH E PGAQ LT+ L APDGT+VATA
Sbjct 23 ALVSACSSPQHASTTPGTTPSIWTGSPAPSEGNGHQEGVPGAQGLTTQLRAPDGTEVATA 82
Query 88 KFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNFLSAGGHYHV 147
KFEF NG+ATVTI TTG G LTPGFHG+HIHQ GKCEPNSVAP+GGAPG+FLSAGGH+ V
Sbjct 83 KFEFGNGFATVTIVTTGTGHLTPGFHGVHIHQAGKCEPNSVAPSGGAPGDFLSAGGHFQV 142
Query 148 PGHTGT-PASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGADNFANIPP 206
PG +SGDL SLQVRGDGS LVTTTDAFTMDDL+SG KTAIIIHAGADNFANIP
Sbjct 143 PGRAKAGQSSGDLTSLQVRGDGSGTLVTTTDAFTMDDLVSGEKTAIIIHAGADNFANIPA 202
Query 207 ERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG 240
+RY Q NGTPGPD+TTLTTGDAGKRVACGVIGSG
Sbjct 203 DRYNQANGTPGPDQTTLTTGDAGKRVACGVIGSG 236
>gi|118466410|ref|YP_883849.1| superoxide dismutase, Cu-Zn [Mycobacterium avium 104]
gi|254777161|ref|ZP_05218677.1| superoxide dismutase, Cu-Zn [Mycobacterium avium subsp. avium
ATCC 25291]
gi|118167697|gb|ABK68594.1| superoxide dismutase, Cu-Zn [Mycobacterium avium 104]
Length=227
Score = 324 bits (831), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 164/225 (73%), Positives = 185/225 (83%), Gaps = 0/225 (0%)
Query 16 SVLSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLSGHDEESPGAQSLTST 75
+L + L L ACSSPQHAS++PGTTP++WTGSP+PSG + A S+T+
Sbjct 3 KLLPPVVLAGCVVALGACSSPQHASSLPGTTPAVWTGSPSPSGAGAAEAAPAAAPSITTH 62
Query 76 LTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAP 135
L APDGT+VATAKFEF+NGYATVTI TT G LTPGFHG+HIH+VGKCEP+SVAPTGGAP
Sbjct 63 LKAPDGTQVATAKFEFSNGYATVTIETTANGVLTPGFHGVHIHKVGKCEPSSVAPTGGAP 122
Query 136 GNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIH 195
G+FLSAGGH+ PGHTG PASGDL SLQVR DGS LVTTTDAFTM+DLL G KTAIIIH
Sbjct 123 GDFLSAGGHFQAPGHTGEPASGDLTSLQVRKDGSGTLVTTTDAFTMEDLLGGQKTAIIIH 182
Query 196 AGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG 240
AGADNFANIP ERY Q NGTPGPDE T++TGDAGKRVACGVIG+G
Sbjct 183 AGADNFANIPAERYNQTNGTPGPDEMTMSTGDAGKRVACGVIGAG 227
>gi|41410019|ref|NP_962855.1| SodC [Mycobacterium avium subsp. paratuberculosis K-10]
gi|45645203|sp|Q9AGW2.2|SODC_MYCPA RecName: Full=Superoxide dismutase [Cu-Zn]; Flags: Precursor
gi|41398852|gb|AAS06471.1| SodC [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336460337|gb|EGO39237.1| Cu/Zn superoxide dismutase [Mycobacterium avium subsp. paratuberculosis
S397]
Length=227
Score = 324 bits (831), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 164/225 (73%), Positives = 185/225 (83%), Gaps = 0/225 (0%)
Query 16 SVLSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLSGHDEESPGAQSLTST 75
+L + L L ACSSPQHAS++PGTTP++WTGSP+PSG + A S+T+
Sbjct 3 KLLPPVVLAGCVVALGACSSPQHASSLPGTTPAVWTGSPSPSGAGAAEAAPAAAPSITTH 62
Query 76 LTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAP 135
L APDGT+VATAKFEF+NGYATVTI TT G LTPGFHG+HIH+VGKCEP+SVAPTGGAP
Sbjct 63 LKAPDGTQVATAKFEFSNGYATVTIETTANGVLTPGFHGVHIHKVGKCEPSSVAPTGGAP 122
Query 136 GNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIH 195
G+FLSAGGH+ PGHTG PASGDL SLQVR DGS LVTTTDAFTM+DLL G KTAIIIH
Sbjct 123 GDFLSAGGHFQAPGHTGEPASGDLTSLQVRKDGSGTLVTTTDAFTMEDLLGGRKTAIIIH 182
Query 196 AGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG 240
AGADNFANIP ERY Q NGTPGPDE T++TGDAGKRVACGVIG+G
Sbjct 183 AGADNFANIPAERYNQTNGTPGPDEMTMSTGDAGKRVACGVIGAG 227
>gi|13357194|gb|AAK20038.1|AF326234_1 copper zinc superoxide dismutase [Mycobacterium avium subsp.
paratuberculosis]
Length=226
Score = 322 bits (824), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 162/216 (75%), Positives = 183/216 (85%), Gaps = 0/216 (0%)
Query 25 AGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLSGHDEESPGAQSLTSTLTAPDGTKV 84
AG + ACSSPQHAS++PGTTP++WTGSP+PSG + A S+T+ L APDGT+V
Sbjct 11 AGCVVGCACSSPQHASSLPGTTPAVWTGSPSPSGAGAAEAAPAAAPSITTHLKAPDGTQV 70
Query 85 ATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNFLSAGGH 144
ATAKFEF+NGYATVTI TT G LTPGFHG+HIH+VGKCEP+SVAPTGGAPG+FLSAGGH
Sbjct 71 ATAKFEFSNGYATVTIETTANGVLTPGFHGVHIHKVGKCEPSSVAPTGGAPGDFLSAGGH 130
Query 145 YHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGADNFANI 204
+ PGHTG PASGDL SLQVR DGS LVTTTDAFTM+DLL G KTAIIIHAGA+NFANI
Sbjct 131 FQAPGHTGEPASGDLTSLQVRKDGSGTLVTTTDAFTMEDLLGGRKTAIIIHAGANNFANI 190
Query 205 PPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG 240
P ERY Q NGTPGPDE T++TGDAGKRVACGVIG+G
Sbjct 191 PAERYNQTNGTPGPDEMTMSTGDAGKRVACGVIGAG 226
>gi|254818946|ref|ZP_05223947.1| superoxide dismutase, Cu-Zn [Mycobacterium intracellulare ATCC
13950]
Length=227
Score = 321 bits (823), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 161/221 (73%), Positives = 180/221 (82%), Gaps = 0/221 (0%)
Query 20 ALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLSGHDEESPGAQSLTSTLTAP 79
+L L AALL ACS+PQ+AS+VPGTTP+IWTGSP+PSG + ++T+ L AP
Sbjct 7 SLVLAGCAALLGACSTPQYASSVPGTTPAIWTGSPSPSGAKAAEAGPAEVPTVTTHLKAP 66
Query 80 DGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNFL 139
DGT+VA AKFEF NGYATVTI TT G L PGFHG+HIH+VGKCEPNSVAP GGAPG+FL
Sbjct 67 DGTQVAIAKFEFNNGYATVTIETTANGVLAPGFHGVHIHKVGKCEPNSVAPNGGAPGDFL 126
Query 140 SAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGAD 199
SAGGH+ VPGH PASGDL SLQVR DGS LVTTTDAF M+DLL+G KTAIIIHA AD
Sbjct 127 SAGGHFQVPGHATEPASGDLTSLQVRKDGSGTLVTTTDAFAMEDLLTGQKTAIIIHADAD 186
Query 200 NFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG 240
NFANIP ERY Q NGTPGPDETT +TGDAGKRVACGVIG+G
Sbjct 187 NFANIPAERYNQTNGTPGPDETTKSTGDAGKRVACGVIGAG 227
>gi|183980771|ref|YP_001849062.1| periplasmic superoxide dismutase [Cu-Zn] SodC [Mycobacterium
marinum M]
gi|183174097|gb|ACC39207.1| periplasmic superoxide dismutase [Cu-Zn] SodC [Mycobacterium
marinum M]
Length=238
Score = 311 bits (798), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 173/241 (72%), Positives = 191/241 (80%), Gaps = 4/241 (1%)
Query 1 MPKPADHRNHAAVSTSVLSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLS 60
MPKPA HRN AAV+ S LSA A ALLS CSSPQHASTVPGTTPS+WTGSPAP+G +
Sbjct 1 MPKPAGHRNVAAVTMSALSAT---ACVALLSGCSSPQHASTVPGTTPSVWTGSPAPAGTN 57
Query 61 GHDEESPGAQSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQV 120
H E + ++ L + L APDGT+VATAKF+FA+G+ATVTI TTG G L PGFHG+HIH+V
Sbjct 58 EHREGASESEGLATQLRAPDGTEVATAKFDFADGFATVTIVTTGTGYLAPGFHGVHIHKV 117
Query 121 GKCEPNSVAPTGGAPGNFLSAGGHYHVPGH-TGTPASGDLASLQVRGDGSAMLVTTTDAF 179
GKCE NS PTGG G+FLSAGGH V G +SGDL SLQVR DGS LVTTTDAF
Sbjct 118 GKCEANSAGPTGGPVGDFLSAGGHLQVSGRPVPGQSSGDLTSLQVRSDGSGTLVTTTDAF 177
Query 180 TMDDLLSGAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGS 239
TMDDL SG KTAIIIHAGADNFANIP +RY Q NGT GPD+TTL TGDAGKRVACGVIGS
Sbjct 178 TMDDLTSGQKTAIIIHAGADNFANIPADRYNQTNGTAGPDQTTLATGDAGKRVACGVIGS 237
Query 240 G 240
G
Sbjct 238 G 238
>gi|118617063|ref|YP_905395.1| periplasmic superoxide dismutase [Cu-Zn] SodC [Mycobacterium
ulcerans Agy99]
gi|118569173|gb|ABL03924.1| periplasmic superoxide dismutase [Cu-Zn] SodC [Mycobacterium
ulcerans Agy99]
Length=238
Score = 307 bits (787), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 171/241 (71%), Positives = 189/241 (79%), Gaps = 4/241 (1%)
Query 1 MPKPADHRNHAAVSTSVLSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLS 60
MPKPA HRN AAV+ S LSA A ALLS CSSPQHASTVPGTTPS+WTGSPA +G +
Sbjct 1 MPKPAGHRNVAAVTMSALSAT---ACVALLSGCSSPQHASTVPGTTPSVWTGSPASAGTN 57
Query 61 GHDEESPGAQSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQV 120
H E + ++ L + L APDG +VATAKF+FA+G+ATVTI TTG G L PGFHG+HIH+V
Sbjct 58 EHREGASESEGLATQLRAPDGAEVATAKFDFADGFATVTIVTTGTGYLAPGFHGVHIHKV 117
Query 121 GKCEPNSVAPTGGAPGNFLSAGGHYHVPGH-TGTPASGDLASLQVRGDGSAMLVTTTDAF 179
GKCE NS PTGG G+FLSAGGH V G +SGDL SLQVR DGS LVTTTDAF
Sbjct 118 GKCEANSAGPTGGPVGDFLSAGGHLQVSGRPVPGQSSGDLTSLQVRSDGSGTLVTTTDAF 177
Query 180 TMDDLLSGAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGS 239
TMDDL SG KTAIIIHAGADNFANIP +RY Q NGT GPD+TTL TGDAGKRVACGVIGS
Sbjct 178 TMDDLTSGQKTAIIIHAGADNFANIPADRYNQTNGTAGPDQTTLATGDAGKRVACGVIGS 237
Query 240 G 240
G
Sbjct 238 G 238
>gi|118473568|ref|YP_885239.1| copper/zinc superoxide dismutase [Mycobacterium smegmatis str.
MC2 155]
gi|118174855|gb|ABK75751.1| copper/zinc superoxide dismutase [Mycobacterium smegmatis str.
MC2 155]
Length=236
Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/219 (69%), Positives = 172/219 (79%), Gaps = 8/219 (3%)
Query 30 LSACSSP-QHASTVPGTTPSIWTGSPAPSGLSGHDEESPGA-------QSLTSTLTAPDG 81
LSACS P + AS+ PGTTP+IWTGSP+P+ SG D ++LT+ L DG
Sbjct 18 LSACSPPGETASSEPGTTPAIWTGSPSPAAPSGEDHGGGHGAGAAGAGETLTAELKTADG 77
Query 82 TKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNFLSA 141
T VATA F+FA+G+ATVTI TT G+LTPGFHG+HIH VGKCE NSVAPTGGAPG+F SA
Sbjct 78 TSVATADFQFADGFATVTIETTTPGRLTPGFHGVHIHSVGKCEANSVAPTGGAPGDFNSA 137
Query 142 GGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGADNF 201
GGH+ V GH+G PASGDL+SLQVR DGS LVTTTDAFT +DLL GAKTAIIIH ADNF
Sbjct 138 GGHFQVSGHSGHPASGDLSSLQVRADGSGKLVTTTDAFTAEDLLDGAKTAIIIHEKADNF 197
Query 202 ANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG 240
ANIPPERY QVNG PGPD+TT+ TGDAG RVACGVI +G
Sbjct 198 ANIPPERYQQVNGAPGPDQTTMATGDAGSRVACGVISAG 236
>gi|342859077|ref|ZP_08715731.1| superoxide dismutase, Cu-Zn [Mycobacterium colombiense CECT 3035]
gi|342133318|gb|EGT86521.1| superoxide dismutase, Cu-Zn [Mycobacterium colombiense CECT 3035]
Length=224
Score = 285 bits (729), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 149/223 (67%), Positives = 168/223 (76%), Gaps = 2/223 (0%)
Query 18 LSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLSGHDEESPGAQSLTSTLT 77
L L L LL ACS PQHAS+VPGTTP+IWTGSP+PS + ++T+ L
Sbjct 4 LPPLVLAGCVVLLGACSVPQHASSVPGTTPAIWTGSPSPSAAKAAEPGPASVPTITTHLK 63
Query 78 APDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGN 137
APDGT+VATAKFEF NGYAT+TI TT G LTPGFH +HIH+VGKCEPNSV PTGGA G+
Sbjct 64 APDGTQVATAKFEFNNGYATITIETTANGVLTPGFHDMHIHKVGKCEPNSVPPTGGAAGD 123
Query 138 FLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAG 197
FLSAG H+ PGHTG PASG L SLQVR DGS L+TTTDAF M+DLL+G KTAIIIHAG
Sbjct 124 FLSAGDHFQAPGHTGEPASGALPSLQVRNDGSGTLMTTTDAFDMEDLLTGQKTAIIIHAG 183
Query 198 ADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG 240
A N AN P Q NGTPGP T++TGDAGKRVACGVIG+G
Sbjct 184 AANSANAPGNN--QTNGTPGPSGMTMSTGDAGKRVACGVIGAG 224
>gi|333989046|ref|YP_004521660.1| periplasmic superoxide dismutase [Mycobacterium sp. JDM601]
gi|333485014|gb|AEF34406.1| periplasmic superoxide dismutase [Mycobacterium sp. JDM601]
Length=217
Score = 281 bits (719), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 145/216 (68%), Positives = 167/216 (78%), Gaps = 4/216 (1%)
Query 29 LLSACSSPQHASTVPGTTPSIWTGSPAPSGLSGHDEESPGAQSLTSTLTAPDGTKVATAK 88
LL+ACS + S VPGTTP+IWTGSPAPSG + ES G+ +L + LT DG +VATA
Sbjct 2 LLAACSPNEPPSDVPGTTPAIWTGSPAPSGAASEPGESGGSDNLVARLTTVDGGQVATAT 61
Query 89 FEFANG----YATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNFLSAGGH 144
FEF+ +AT+T+ TT G LTPGFHG+HIH VGKCE +SVAP GGAPG FLSAGGH
Sbjct 62 FEFSKAGGKEFATITVETTSTGVLTPGFHGMHIHGVGKCEADSVAPGGGAPGAFLSAGGH 121
Query 145 YHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGADNFANI 204
+ PGH P SGDL SLQVR DGSA+LVTTTDAFT +LL G T++IIHA DNFANI
Sbjct 122 FQAPGHNEHPQSGDLTSLQVRSDGSALLVTTTDAFTRQELLDGEGTSLIIHADDDNFANI 181
Query 205 PPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG 240
P +RY QVNGTPGPD+TTLTTGDAGKRVACGVIG+G
Sbjct 182 PADRYTQVNGTPGPDQTTLTTGDAGKRVACGVIGAG 217
>gi|108797552|ref|YP_637749.1| copper/zinc binding superoxide dismutase protein [Mycobacterium
sp. MCS]
gi|119866638|ref|YP_936590.1| copper/zinc binding superoxide dismutase [Mycobacterium sp. KMS]
gi|126433174|ref|YP_001068865.1| copper/zinc binding superoxide dismutase [Mycobacterium sp. JLS]
gi|108767971|gb|ABG06693.1| superoxide dismutase, copper/zinc binding protein [Mycobacterium
sp. MCS]
gi|119692727|gb|ABL89800.1| superoxide dismutase, copper/zinc binding protein [Mycobacterium
sp. KMS]
gi|126232974|gb|ABN96374.1| superoxide dismutase, copper/zinc binding protein [Mycobacterium
sp. JLS]
Length=228
Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/222 (67%), Positives = 169/222 (77%), Gaps = 8/222 (3%)
Query 27 AALLSACSSPQHASTVPGTTPSIWTGSPAPSG--------LSGHDEESPGAQSLTSTLTA 78
A LSACS + S+ PGTTPS+WTGSP+PS SG + + G Q LT+ L +
Sbjct 6 ALALSACSPNEPVSSEPGTTPSVWTGSPSPSAAPGQGEEGGSGSEGQGEGGQKLTAELKS 65
Query 79 PDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNF 138
PDGT VA A+F+F+ GYATVT+ T G+L PGFHG+H+HQVGKCEPNSVAP+GGAPGNF
Sbjct 66 PDGTTVANAEFDFSGGYATVTVQTVASGQLEPGFHGMHVHQVGKCEPNSVAPSGGAPGNF 125
Query 139 LSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGA 198
SAGGH+ G TG PASGDL SLQVR DGSAM+VTTTDAFT +DL G TAIIIH A
Sbjct 126 NSAGGHFQTEGKTGHPASGDLTSLQVREDGSAMVVTTTDAFTAEDLTGGEGTAIIIHEKA 185
Query 199 DNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG 240
DNFANIPPE+Y QVNGTPGPD+ T+ TGDAG RVACGVI SG
Sbjct 186 DNFANIPPEKYNQVNGTPGPDQATMATGDAGGRVACGVIRSG 227
>gi|120401750|ref|YP_951579.1| superoxide dismutase, copper/zinc binding [Mycobacterium vanbaalenii
PYR-1]
gi|119954568|gb|ABM11573.1| superoxide dismutase, copper/zinc binding protein [Mycobacterium
vanbaalenii PYR-1]
Length=235
Score = 275 bits (703), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 148/234 (64%), Positives = 171/234 (74%), Gaps = 11/234 (4%)
Query 16 SVLSALFLGAGAALLSACSSPQHA-STVPGTTPSIWTGSPAPSGLSGHDEE--------S 66
SV +A A LSACS P S PGTTP +WTGSP+P+ +G DE+
Sbjct 4 SVAAATLFAVPALALSACSPPGEVPSDSPGTTPPVWTGSPSPT--AGPDEQGSGHGSGTQ 61
Query 67 PGAQSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPN 126
G ++LT+ L DGT VATA F++GYATVT+ +G G+LTPGFHG+HIH VGKCE +
Sbjct 62 AGGETLTADLKLADGTTVATADITFSDGYATVTVEASGAGELTPGFHGIHIHSVGKCEAD 121
Query 127 SVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLS 186
SVAPTGGAP +F SAGGH+ V GH+G PASGDL+SLQVR DGSA LVTTTDAFT +DLL
Sbjct 122 SVAPTGGAPADFNSAGGHFQVSGHSGHPASGDLSSLQVREDGSAKLVTTTDAFTKEDLLD 181
Query 187 GAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG 240
GA TA+IIH ADNFANIPPERY QVNG P PD+TTL TGDAG RVACGVI G
Sbjct 182 GAGTALIIHEKADNFANIPPERYQQVNGAPPPDQTTLATGDAGARVACGVITGG 235
>gi|145220777|ref|YP_001131455.1| copper/zinc binding superoxide dismutase [Mycobacterium gilvum
PYR-GCK]
gi|315442269|ref|YP_004075148.1| Cu/Zn superoxide dismutase [Mycobacterium sp. Spyr1]
gi|145213263|gb|ABP42667.1| superoxide dismutase, copper/zinc binding protein [Mycobacterium
gilvum PYR-GCK]
gi|315260572|gb|ADT97313.1| Cu/Zn superoxide dismutase [Mycobacterium sp. Spyr1]
Length=236
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/230 (66%), Positives = 167/230 (73%), Gaps = 8/230 (3%)
Query 16 SVLSALFLGAGAALLSACSSP-QHASTVPGTTPSIWTGSPAPSGLSGHDEESPGAQ---- 70
SV +A A LSACS P + S PGTTPS+WTGSP+PS +G G
Sbjct 4 SVAAATLFAVPALALSACSPPGEVPSDSPGTTPSVWTGSPSPSAEAGEHGAGHGGGSGQA 63
Query 71 ---SLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNS 127
+LT+ L DGT VA A+ F++GYATVT+ TTG G LTPGFHG+HIHQVGKCEPNS
Sbjct 64 SGETLTAELNLADGTTVANAEIVFSDGYATVTVETTGEGDLTPGFHGMHIHQVGKCEPNS 123
Query 128 VAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSG 187
VAPTGGAPGNF SAGGH V G+TG PASGDL SLQVR DGSA +VTTTDAFT +DL
Sbjct 124 VAPTGGAPGNFNSAGGHLQVGGNTGHPASGDLTSLQVREDGSAKVVTTTDAFTAEDLTGD 183
Query 188 AKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVI 237
A TAIIIH ADNFANIPPERY QV+G P PD+TTL TGDAG RVACGVI
Sbjct 184 AGTAIIIHEKADNFANIPPERYQQVDGAPPPDQTTLATGDAGARVACGVI 233
>gi|169631262|ref|YP_001704911.1| superoxide dismutase [Mycobacterium abscessus ATCC 19977]
gi|169243229|emb|CAM64257.1| Superoxide dismutase [Cu-Zn] precursor [Mycobacterium abscessus]
Length=238
Score = 266 bits (679), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/234 (61%), Positives = 168/234 (72%), Gaps = 6/234 (2%)
Query 13 VSTSVLSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPS------GLSGHDEES 66
V +VL++ L A A LS CS Q AST PGTTP +WTGS AP+ G G ++
Sbjct 5 VKPAVLASGTLAAVALSLSGCSPDQQASTTPGTTPPVWTGSTAPATAGEHGGHGGGEQPV 64
Query 67 PGAQSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPN 126
P + L +TL DGT VATA F F +GYA +T+ TT GKLTPGFHGLHIH KCE N
Sbjct 65 PAGEKLNATLKLADGTPVATAAFVFQDGYARITVKTTQNGKLTPGFHGLHIHSFKKCEAN 124
Query 127 SVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLS 186
SVAP GGAPG+FLSAGGH++VPG+TG P+SGDL SL + DGS LVTT D+FT +DLL+
Sbjct 125 SVAPAGGAPGDFLSAGGHFNVPGYTGHPSSGDLVSLNILKDGSGELVTTADSFTKEDLLA 184
Query 187 GAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG 240
G TAIIIH +DNFANIP ERY Q NG GPD+TT +TGDAGKRVACG+I +G
Sbjct 185 GNGTAIIIHEKSDNFANIPAERYTQANGASGPDDTTKSTGDAGKRVACGLIDAG 238
>gi|59805011|gb|AAX08101.1| copper/zinc superoxide dismutase [Rhodococcus equi]
Length=250
Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 130/223 (59%), Positives = 156/223 (70%), Gaps = 11/223 (4%)
Query 23 LGAGAAL-LSACSSPQHASTVPGTTPSIWTGSPAPSGLSG-----HDEESPGAQSLTSTL 76
L A AAL L+ACS+ + + VPGTTP +WTG+PAP+G G H + A +++ TL
Sbjct 31 LVAIAALGLTACSNNEEPTDVPGTTPPVWTGAPAPAGEHGESGSEHATTTGSADNVSVTL 90
Query 77 TAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPG 136
G++V TA G+ VT+ G LTPGFHGLH+H VGKCEPNSVAPTGG PG
Sbjct 91 KDAKGSQVGTATLAENGGFVQVTVDAQG---LTPGFHGLHVHSVGKCEPNSVAPTGGEPG 147
Query 137 NFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAK-TAIIIH 195
NFLSAGGH+ V GHTG PASGDL SL+VR DG LVTTTDAFT++DL +G K TA++IH
Sbjct 148 NFLSAGGHFQVEGHTGHPASGDLTSLEVREDGKGYLVTTTDAFTLEDLKNGGKGTALMIH 207
Query 196 AGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIG 238
A ADNF NI P RY + PD+ TL+TGDAG RVACGVIG
Sbjct 208 ADADNFGNI-PTRYALPDNAAVPDQQTLSTGDAGGRVACGVIG 249
>gi|325673959|ref|ZP_08153649.1| copper/zinc superoxide dismutase [Rhodococcus equi ATCC 33707]
gi|325555224|gb|EGD24896.1| copper/zinc superoxide dismutase [Rhodococcus equi ATCC 33707]
Length=236
Score = 231 bits (588), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 130/223 (59%), Positives = 156/223 (70%), Gaps = 11/223 (4%)
Query 23 LGAGAAL-LSACSSPQHASTVPGTTPSIWTGSPAPSGLSG-----HDEESPGAQSLTSTL 76
L A AAL L+ACS+ + + VPGTTP +WTG+PAP+G G H + A +++ TL
Sbjct 17 LVAIAALGLTACSNNEEPTDVPGTTPPVWTGAPAPAGEHGESGSEHATTTGSADNVSVTL 76
Query 77 TAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPG 136
G++V TA G+ VT+ G LTPGFHGLH+H VGKCEPNSVAPTGG PG
Sbjct 77 KDAKGSQVGTATLAENGGFVQVTVDAQG---LTPGFHGLHVHSVGKCEPNSVAPTGGEPG 133
Query 137 NFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAK-TAIIIH 195
NFLSAGGH+ V GHTG PASGDL SL+VR DG LVTTTDAFT++DL +G K TA++IH
Sbjct 134 NFLSAGGHFQVEGHTGHPASGDLTSLEVREDGKGYLVTTTDAFTLEDLKNGGKGTALMIH 193
Query 196 AGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIG 238
A ADNF NI P RY + PD+ TL+TGDAG RVACGVIG
Sbjct 194 ADADNFGNI-PTRYALPDNAAVPDQQTLSTGDAGGRVACGVIG 235
>gi|312141211|ref|YP_004008547.1| superoxide dismutase soda4 [Rhodococcus equi 103S]
gi|311890550|emb|CBH49868.1| secreted superoxide dismutase SodA4 [Rhodococcus equi 103S]
Length=223
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/215 (59%), Positives = 151/215 (71%), Gaps = 10/215 (4%)
Query 30 LSACSSPQHASTVPGTTPSIWTGSPAPSGLSG-----HDEESPGAQSLTSTLTAPDGTKV 84
L+ACS+ + + VPGTTP +WTG+PAP+G G H + A +++ TL G++V
Sbjct 12 LTACSNNEEPTDVPGTTPPVWTGAPAPAGEHGESGSEHATTTGSADNVSVTLKDAKGSQV 71
Query 85 ATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNFLSAGGH 144
TA G+ VT+ G LTPGFHGLH+H VGKCEPNSVAPTGG PGNFLSAGGH
Sbjct 72 GTATLAENGGFVQVTVDAQG---LTPGFHGLHVHSVGKCEPNSVAPTGGEPGNFLSAGGH 128
Query 145 YHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAK-TAIIIHAGADNFAN 203
+ V GHTG PASGDL SL+VR DG LVTTTDAFT++DL +G K TA++IHA ADNF N
Sbjct 129 FQVEGHTGHPASGDLTSLEVREDGKGYLVTTTDAFTLEDLKNGGKGTALMIHADADNFGN 188
Query 204 IPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIG 238
I P RY + PD+ TL+TGDAG RVACGVIG
Sbjct 189 I-PTRYALPDNAAVPDQQTLSTGDAGGRVACGVIG 222
>gi|41408229|ref|NP_961065.1| hypothetical protein MAP2131c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396584|gb|AAS04448.1| hypothetical protein MAP_2131c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=205
Score = 229 bits (583), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 122/223 (55%), Positives = 148/223 (67%), Gaps = 27/223 (12%)
Query 18 LSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLSGHDEESPGAQSLTSTLT 77
++ L +G ++ACSSPQHAST PGTTP + + +P SG + +PG +LT+ L
Sbjct 10 IATLLMGLPVLAMTACSSPQHASTQPGTTPPVKSAAPTSSGAT--TTPAPGGGALTAELK 67
Query 78 APDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGN 137
PDG VATA F+F GY TVT+ T G LTPG HGLH+H++GKCEPNSVAPTGGAPGN
Sbjct 68 TPDGRSVATATFDFTGGYVTVTVKTVANGVLTPGLHGLHVHEIGKCEPNSVAPTGGAPGN 127
Query 138 FLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAG 197
FLSAGGHY PGHTG P SGDLA+LQVR DG+A LVTTTDAFT D+LL+G KTA+++H
Sbjct 128 FLSAGGHYQAPGHTGKPESGDLATLQVRQDGAAYLVTTTDAFTRDELLAGNKTALMLHGA 187
Query 198 ADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG 240
D T +A RVACGVIG+G
Sbjct 188 ED-------------------------TENAMDRVACGVIGTG 205
>gi|342857480|ref|ZP_08714136.1| hypothetical protein MCOL_01350 [Mycobacterium colombiense CECT
3035]
gi|342134813|gb|EGT87979.1| hypothetical protein MCOL_01350 [Mycobacterium colombiense CECT
3035]
Length=205
Score = 221 bits (564), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 118/223 (53%), Positives = 145/223 (66%), Gaps = 27/223 (12%)
Query 18 LSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLSGHDEESPGAQSLTSTLT 77
+++ +G ++ACSSPQHAST PGTTP + + +P SG + +P SL++ L
Sbjct 10 VASFLMGLPVVAMTACSSPQHASTQPGTTPPVKSAAPTSSGET--TTPAPAGGSLSAELK 67
Query 78 APDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGN 137
PDG ATA F+F GY TVT+ TT G LTPG HGLH+H++GKCEPNSVAPTGGAPGN
Sbjct 68 TPDGRSAATATFDFTGGYVTVTVKTTAPGILTPGIHGLHVHEIGKCEPNSVAPTGGAPGN 127
Query 138 FLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAG 197
FLSAGGHY PGHTG P SGDL SL+VR DGSA LVTTTD+F D+LL+G KTA+++H
Sbjct 128 FLSAGGHYQAPGHTGKPESGDLTSLEVRQDGSAYLVTTTDSFNRDELLAGNKTALMLHGA 187
Query 198 ADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG 240
D T +A RVACGVIG+G
Sbjct 188 QD-------------------------TENAMDRVACGVIGTG 205
>gi|111019166|ref|YP_702138.1| superoxide dismutase [Rhodococcus jostii RHA1]
gi|110818696|gb|ABG93980.1| superoxide dismutase [Rhodococcus jostii RHA1]
Length=233
Score = 221 bits (562), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 129/246 (53%), Positives = 163/246 (67%), Gaps = 21/246 (8%)
Query 1 MPKPADHRNHAAVSTSVLSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPS--G 58
M + R + T V++ LG L+ACS+ + + VPGTTP +WTG+ PS G
Sbjct 1 MASSSTRRMSWRIVTPVVAIAALG-----LTACSNNEEPTDVPGTTPPVWTGAADPSAAG 55
Query 59 LSGHDE----ESPGAQSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHG 114
+ G E ES + ++++TL +G V TA F+ A + VT++ V TPGFHG
Sbjct 56 VPGDAESGSGESAESGAVSATLKNAEGDDVGTATFKQAGSHVEVTVS---VKDQTPGFHG 112
Query 115 LHIHQVGKCEPNSVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVT 174
H+H VGKCE NSVAPTGGAPGNFLSAGGH+ GH+G PASGDL SLQV DG+A LVT
Sbjct 113 FHVHSVGKCETNSVAPTGGAPGNFLSAGGHFQAEGHSGHPASGDLTSLQVLADGTAELVT 172
Query 175 TTDAFTMDDLLSG-AKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVA 233
TTDAFT++DL +G + TA++IH+G DNFANI P RY P PD+ TL TGDAG RVA
Sbjct 173 TTDAFTVEDLKNGDSGTAVMIHSGPDNFANI-PTRYA-----PAPDQETLNTGDAGSRVA 226
Query 234 CGVIGS 239
CGVIG+
Sbjct 227 CGVIGA 232
>gi|226361303|ref|YP_002779081.1| superoxide dismutase [Rhodococcus opacus B4]
gi|226239788|dbj|BAH50136.1| superoxide dismutase [Rhodococcus opacus B4]
Length=225
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/218 (57%), Positives = 152/218 (70%), Gaps = 16/218 (7%)
Query 30 LSACSSPQHASTVPGTTPSIWTGSPAPS--GLSGHDEESPGAQS----LTSTLTAPDGTK 83
L+ACS+ + + VPGTTP +WTG+ PS G+ G E G + LT+TL +G
Sbjct 17 LTACSNNEEPTDVPGTTPPVWTGAADPSAAGVPGDAESGSGEHAESGALTATLKNAEGEN 76
Query 84 VATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNFLSAGG 143
V TA F+ + + VT++ V TPGFHG H+H VGKCE NSVAPTGGAPGNFLSAGG
Sbjct 77 VGTATFKQSGSHVEVTVS---VKDQTPGFHGFHVHSVGKCETNSVAPTGGAPGNFLSAGG 133
Query 144 HYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSG-AKTAIIIHAGADNFA 202
H+ GH+G PASGDL SLQV DG+A LVT+TDAFT++DL +G + TA++IH+G DNFA
Sbjct 134 HFQAEGHSGHPASGDLTSLQVLEDGTAELVTSTDAFTVEDLKNGDSGTAVMIHSGPDNFA 193
Query 203 NIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG 240
NI P RY P PD+ TL TGDAG RVACGVIG+G
Sbjct 194 NI-PTRYA-----PAPDQETLNTGDAGSRVACGVIGAG 225
>gi|226304984|ref|YP_002764942.1| superoxide dismutase [Rhodococcus erythropolis PR4]
gi|226184099|dbj|BAH32203.1| probable superoxide dismutase [Rhodococcus erythropolis PR4]
Length=233
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/215 (56%), Positives = 146/215 (68%), Gaps = 16/215 (7%)
Query 30 LSACSSPQHASTVPGTTPSIWTGSPAPSGLS---GHDEESP----GAQSLTSTLTAPDGT 82
L+ACS+ + S+VPGTTP +WTG+ PS GH E+ A+++T+TL DG
Sbjct 25 LTACSNSEEPSSVPGTTPPVWTGAADPSAHESAGGHGSETAHAGASAETVTATLNGTDGA 84
Query 83 KVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNFLSAG 142
KV T F VT+ G LTPGFHG H+HQV KCE NSVAP+GG PGNFLSAG
Sbjct 85 KVGTVTFAQEGSDVKVTLDAKG---LTPGFHGFHVHQVAKCETNSVAPSGGEPGNFLSAG 141
Query 143 GHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGADNFA 202
GH+ GH+G PASGDL S+QV DG+A LVTTTDAFT+D+L++ T+++IHAGADNF
Sbjct 142 GHFQAEGHSGHPASGDLTSVQVLEDGTATLVTTTDAFTVDELVANGGTSVMIHAGADNFG 201
Query 203 NIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVI 237
NI P RY P PD+ TL TGDAG RVACGVI
Sbjct 202 NI-PTRYA-----PAPDQQTLDTGDAGGRVACGVI 230
>gi|118465876|ref|YP_881261.1| [Cu-Zn] superoxide dismutase [Mycobacterium avium 104]
gi|254774768|ref|ZP_05216284.1| hypothetical protein MaviaA2_08863 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118167163|gb|ABK68060.1| [Cu-Zn] superoxide dismutase [Mycobacterium avium 104]
Length=205
Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/224 (55%), Positives = 148/224 (67%), Gaps = 27/224 (12%)
Query 17 VLSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLSGHDEESPGAQSLTSTL 76
++ L +G ++ACSSPQHAST PGTTP + + +P SG + +PG +LT+ L
Sbjct 9 CIATLLMGLPVLAMTACSSPQHASTQPGTTPPVKSAAPTSSGAT--TTPAPGGGALTAEL 66
Query 77 TAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPG 136
PDG VATA F+F GY TVT+ T G LTPG HGLH+H++GKCEPNSVAPTGGAPG
Sbjct 67 KTPDGRSVATATFDFTGGYVTVTVKTVTNGVLTPGLHGLHVHEIGKCEPNSVAPTGGAPG 126
Query 137 NFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHA 196
NFLSAGGHY PGHTG P SGDLA+LQVR DG+A LVTTTDAFT D+LL+G KTA+++H
Sbjct 127 NFLSAGGHYQAPGHTGKPESGDLATLQVRQDGAAYLVTTTDAFTRDELLAGNKTALMLHG 186
Query 197 GADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG 240
D T +A RVACGVIG+G
Sbjct 187 AED-------------------------TENAMDRVACGVIGTG 205
>gi|240167819|ref|ZP_04746478.1| copper/zinc superoxide dismutase [Mycobacterium kansasii ATCC
12478]
Length=223
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/154 (70%), Positives = 122/154 (80%), Gaps = 0/154 (0%)
Query 84 VATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNFLSAGG 143
+A A F+FANG+AT+T+ T LTPGFHGLHIH VGKCE NSVAPTGGA G+F SAGG
Sbjct 1 MANATFDFANGFATLTLETVPNPILTPGFHGLHIHSVGKCEANSVAPTGGASGDFNSAGG 60
Query 144 HYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGADNFAN 203
HY PGHTG PASGDL SL+VR DG+A LVTT+++FT DL + + TA+IIH DNF N
Sbjct 61 HYQAPGHTGYPASGDLTSLEVRSDGAAKLVTTSNSFTAADLRNSSGTALIIHQDPDNFGN 120
Query 204 IPPERYVQVNGTPGPDETTLTTGDAGKRVACGVI 237
IPP RY Q NGTPGPDE TL TGD+GKRVACGVI
Sbjct 121 IPPARYTQKNGTPGPDEETLATGDSGKRVACGVI 154
>gi|254819372|ref|ZP_05224373.1| hypothetical protein MintA_05580 [Mycobacterium intracellulare
ATCC 13950]
Length=205
Score = 214 bits (545), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 118/224 (53%), Positives = 147/224 (66%), Gaps = 27/224 (12%)
Query 17 VLSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLSGHDEESPGAQSLTSTL 76
++++L +G ++ACSSPQH S+ PGTTP + T +P SG + +P SL++ L
Sbjct 9 LMASLLMGLPVVAMTACSSPQHESSQPGTTPPVKTAAPTSSGEA--TTPAPAGGSLSAEL 66
Query 77 TAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPG 136
PDG ATA F+F Y TVT+ T G LTPG HGLH+H++GKCEPNSVAPTGGAPG
Sbjct 67 KTPDGRTAATATFDFTGNYVTVTVKTVATGILTPGLHGLHVHEIGKCEPNSVAPTGGAPG 126
Query 137 NFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHA 196
NFLSAGGHY PGHTG P SGDLA+L+VR DG+A LVTTTD+FT DDLL+GAKTA+++H
Sbjct 127 NFLSAGGHYQAPGHTGKPESGDLATLEVRQDGAAYLVTTTDSFTRDDLLAGAKTALMLHG 186
Query 197 GADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG 240
D T +A RVACGVIG+G
Sbjct 187 AQD-------------------------TENAMDRVACGVIGTG 205
>gi|296166324|ref|ZP_06848761.1| copper/zinc superoxide dismutase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898333|gb|EFG77902.1| copper/zinc superoxide dismutase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=202
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 117/223 (53%), Positives = 142/223 (64%), Gaps = 27/223 (12%)
Query 18 LSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLSGHDEESPGAQSLTSTLT 77
++ L +G ++ACSSPQHAS+ GTTP + + PA SG + +P +SL++ L
Sbjct 7 IATLAVGLPVVAITACSSPQHASSQSGTTPPVKSAPPASSGET--TTPAPSGESLSAQLK 64
Query 78 APDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGN 137
PDG VATA F+F GY TVT+ T G LTPGFHG+H+H+ GKCEPNSVAPTGG PGN
Sbjct 65 TPDGRSVATATFDFTGGYVTVTVKTVAGGILTPGFHGMHVHEFGKCEPNSVAPTGGPPGN 124
Query 138 FLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAG 197
FLSAGGHY+ PGHTG P SGDL SL+VR DGSA LVTTTDAFT D L+ G A+++H G
Sbjct 125 FLSAGGHYNAPGHTGKPESGDLTSLEVRSDGSAYLVTTTDAFTRDVLVGGEGKALMLH-G 183
Query 198 ADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG 240
A N A RVACGVIG+G
Sbjct 184 AQYSDN------------------------AMDRVACGVIGTG 202
>gi|54027272|ref|YP_121514.1| putative superoxide dismutase [Nocardia farcinica IFM 10152]
gi|54018780|dbj|BAD60150.1| putative superoxide dismutase [Nocardia farcinica IFM 10152]
Length=225
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/223 (53%), Positives = 139/223 (63%), Gaps = 13/223 (5%)
Query 15 TSVLSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLSGHDEESPGAQSLTS 74
T VL+ LG L+ACS+ Q +S V GTTP +WTG+ AP+ E T+
Sbjct 15 TPVLAVAVLG-----LAACSNSQESSDVKGTTPPVWTGASAPATTGADHGEHASGTGATA 69
Query 75 TLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGA 134
L G V TA G+ +T+ G L PGFHGLH HQ G CEPNSVAPTGG
Sbjct 70 ELKDASGASVGTANITEEGGHLVITVEARG---LRPGFHGLHFHQNGACEPNSVAPTGGP 126
Query 135 PGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIII 194
G+FLSAGGH V PASGDL SLQVRGDGSA LVTTTD+ T++D+ A+II
Sbjct 127 AGDFLSAGGHLQVGNANSHPASGDLTSLQVRGDGSARLVTTTDSVTLNDV---KNRALII 183
Query 195 HAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVI 237
H+G DNF NI P+RY Q G GPD+TTL TGDAG RVACGV+
Sbjct 184 HSGPDNFGNI-PDRY-QREGGAGPDDTTLATGDAGSRVACGVV 224
>gi|229493704|ref|ZP_04387488.1| copper/zinc superoxide dismutase [Rhodococcus erythropolis SK121]
gi|229319373|gb|EEN85210.1| copper/zinc superoxide dismutase [Rhodococcus erythropolis SK121]
Length=190
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/196 (57%), Positives = 131/196 (67%), Gaps = 16/196 (8%)
Query 49 IWTGSPAPSGLS---GHDEESP----GAQSLTSTLTAPDGTKVATAKFEFANGYATVTIA 101
+WTG+ PS GH E+ A+++T+TL DG KV T F VT+
Sbjct 1 MWTGAADPSAHESAGGHGSETAHAGASAETVTATLNGTDGAKVGTVTFAQEGSDVKVTLD 60
Query 102 TTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLAS 161
G LTPGFHG H+HQV KCE NSVAP+GG PGNFLSAGGH+ GHTG PASGDL S
Sbjct 61 AKG---LTPGFHGFHVHQVAKCETNSVAPSGGEPGNFLSAGGHFQAEGHTGHPASGDLTS 117
Query 162 LQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGADNFANIPPERYVQVNGTPGPDET 221
+QV DG+A LVTTTDAFT+D+L++ T+++IHAGADNF NIP RY P PD+
Sbjct 118 VQVLEDGTATLVTTTDAFTVDELVANGGTSVMIHAGADNFGNIPT-RYA-----PAPDQQ 171
Query 222 TLTTGDAGKRVACGVI 237
TL TGDAG RVACGVI
Sbjct 172 TLDTGDAGGRVACGVI 187
>gi|336461677|gb|EGO40540.1| Cu/Zn superoxide dismutase [Mycobacterium avium subsp. paratuberculosis
S397]
Length=157
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/170 (59%), Positives = 116/170 (69%), Gaps = 25/170 (14%)
Query 71 SLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAP 130
+LT+ L PDG VATA F+F GY TVT+ T G LTPG HGLH+H++GKCEPNSVAP
Sbjct 13 ALTAELKTPDGRSVATATFDFTGGYVTVTVKTVANGVLTPGLHGLHVHEIGKCEPNSVAP 72
Query 131 TGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKT 190
TGGAPGNFLSAGGHY PGHTG P SGDLA+LQVR DG+A LVTTTDAFT D+LL+G KT
Sbjct 73 TGGAPGNFLSAGGHYQAPGHTGKPESGDLATLQVRQDGAAYLVTTTDAFTRDELLAGNKT 132
Query 191 AIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG 240
A+++H D T +A RVACGVIG+G
Sbjct 133 ALMLHGAED-------------------------TENAMDRVACGVIGTG 157
>gi|254776792|ref|ZP_05218308.1| superoxide dismutase, Cu-Zn [Mycobacterium avium subsp. avium
ATCC 25291]
Length=254
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/171 (54%), Positives = 110/171 (65%), Gaps = 19/171 (11%)
Query 67 PGAQSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPN 126
PG++ LT+ L +G VA A FEFANGYATVT+ L+PGFHGL IH VGKCE N
Sbjct 40 PGSERLTTQLKTAEGIPVANASFEFANGYATVTVEAGPNQVLSPGFHGLQIHAVGKCEAN 99
Query 127 SVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLS 186
S APTGG+ G+F SAG Y P HTG PASGDL +LQVR DGSA LVTT++AFT DL +
Sbjct 100 STAPTGGSTGDFESAGAVYQAPDHTGYPASGDLTALQVRSDGSAKLVTTSNAFTAADLRT 159
Query 187 GAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVI 237
+ +A+I+H A+N AN P D+GKR+ACGVI
Sbjct 160 SSGSALILHQNANNLANTP-------------------AADSGKRLACGVI 191
>gi|118464546|ref|YP_883497.1| superoxide dismutase, Cu-Zn [Mycobacterium avium 104]
gi|118165833|gb|ABK66730.1| superoxide dismutase, Cu-Zn [Mycobacterium avium 104]
Length=254
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/171 (54%), Positives = 110/171 (65%), Gaps = 19/171 (11%)
Query 67 PGAQSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPN 126
PG++ LT+ L +G VA A FEFANGYATVT+ L+PGFHGL IH VGKCE N
Sbjct 40 PGSERLTTQLKTAEGIPVANASFEFANGYATVTVEAGPNQVLSPGFHGLQIHAVGKCEAN 99
Query 127 SVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLS 186
S APTGG+ G+F SAG Y P HTG PASGDL +LQVR DGSA LVTT++AFT DL +
Sbjct 100 STAPTGGSTGDFESAGAVYQAPDHTGYPASGDLTALQVRSDGSAKLVTTSNAFTAADLRT 159
Query 187 GAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVI 237
+ +A+I+H A+N AN P D+GKR+ACGVI
Sbjct 160 SSGSALILHQNANNLANTP-------------------AADSGKRLACGVI 191
>gi|41410370|ref|NP_963206.1| hypothetical protein MAP4272c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41399204|gb|AAS06822.1| hypothetical protein MAP_4272c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336459758|gb|EGO38676.1| Cu/Zn superoxide dismutase [Mycobacterium avium subsp. paratuberculosis
S397]
Length=254
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/171 (54%), Positives = 110/171 (65%), Gaps = 19/171 (11%)
Query 67 PGAQSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPN 126
PG++ LT+ L +G VA A FEFANGYATVT+ L+PGFHGL IH VGKCE N
Sbjct 40 PGSERLTTQLKTAEGIPVANASFEFANGYATVTVEAGPNQVLSPGFHGLQIHAVGKCEAN 99
Query 127 SVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLS 186
S APTGG+ G+F SAG Y P HTG PASGDL +LQVR DGSA LVTT++AFT DL +
Sbjct 100 STAPTGGSTGDFESAGAVYQAPDHTGYPASGDLTALQVRSDGSAKLVTTSNAFTAADLRT 159
Query 187 GAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVI 237
+ +A+I+H A+N AN P D+GKR+ACGVI
Sbjct 160 SSGSALILHQNANNLANTP-------------------AADSGKRLACGVI 191
>gi|342861906|ref|ZP_08718551.1| superoxide dismutase, Cu-Zn [Mycobacterium colombiense CECT 3035]
gi|342130723|gb|EGT84027.1| superoxide dismutase, Cu-Zn [Mycobacterium colombiense CECT 3035]
Length=253
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 94/172 (55%), Positives = 111/172 (65%), Gaps = 18/172 (10%)
Query 66 SPGAQSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEP 125
+PGA+ LT+ L DG+ VA A FEFANGYATVT+ L+PGFHGL IH VGKCEP
Sbjct 39 TPGAERLTTQLKTADGSPVANATFEFANGYATVTVEAGPNQVLSPGFHGLQIHAVGKCEP 98
Query 126 NSVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLL 185
NS AP GG+ G+F SAG Y HT PASGDL +LQVR DGSA LVTT++AFT DL
Sbjct 99 NSSAPNGGSTGDFDSAGSVYQAADHTSYPASGDLTALQVRSDGSAKLVTTSNAFTSADLR 158
Query 186 SGAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVI 237
+ + TA+IIH ADN TT TG++GKR+ACGVI
Sbjct 159 NSSGTALIIHQTADNLG------------------TTAPTGESGKRLACGVI 192
>gi|296141402|ref|YP_003648645.1| superoxide dismutase copper/zinc binding protein [Tsukamurella
paurometabola DSM 20162]
gi|296029536|gb|ADG80306.1| superoxide dismutase copper/zinc binding protein [Tsukamurella
paurometabola DSM 20162]
Length=244
Score = 168 bits (425), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/238 (45%), Positives = 135/238 (57%), Gaps = 21/238 (8%)
Query 20 ALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAP------SGLSGHDEESPG----- 68
A+ A AL +S + A GTTP++ +G+ P S GH EE PG
Sbjct 11 AILPVAALALTGCVNSEKSAGAGVGTTPAVVSGATVPAEGPVLSNAPGHGEEKPGEGGAP 70
Query 69 -AQSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNS 127
A + ++L PDGT A F +G + + TG L GFHG+HIH+VGKCEPNS
Sbjct 71 SAGAAEASLVKPDGTSAGKATFTEKDGVVVIDVRVTG---LPAGFHGMHIHEVGKCEPNS 127
Query 128 VAPTGGAPG---NFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDL 184
VA G APG NF SAGGH+ G TG P +GDL S+ V +G+ VT+T AFT+ D+
Sbjct 128 VAKNG-APGSATNFGSAGGHWQKAGATGHPMTGDLVSIYVNANGTGQTVTSTGAFTLADI 186
Query 185 LSGAK-TAIIIHAGADNFANIPPERYVQ-VNGTPGPDETTLTTGDAGKRVACGVIGSG 240
A A++IH ADNF N+P +Y V G P PDE TL TGDAG R+ACGVI G
Sbjct 187 KKNADGNALMIHEKADNFGNVPATKYANIVPGQPVPDEQTLMTGDAGGRIACGVIKVG 244
>gi|296393250|ref|YP_003658134.1| superoxide dismutase copper/zinc binding protein [Segniliparus
rotundus DSM 44985]
gi|296180397|gb|ADG97303.1| superoxide dismutase copper/zinc binding protein [Segniliparus
rotundus DSM 44985]
Length=249
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/234 (47%), Positives = 129/234 (56%), Gaps = 13/234 (5%)
Query 14 STSVLSALFLGAGAALLSACSSPQHASTV--PGTTPSI------WTGSPAPSGLSGHDEE 65
ST V+ A A A L+ C++ + S V PG TP G+ A G S +
Sbjct 15 STGVVRAALAFAALAALAGCTNSEQDSVVGGPGATPKSGAAHPGHVGASAEPGASSAAKG 74
Query 66 SPGAQSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEP 125
+ G++ ++ L G T F G + I G LTPGFH +HIH VGKCEP
Sbjct 75 NGGSEHASAELKNAQGADAGTVDFTQNGGKVVIKIDVKG---LTPGFHAVHIHAVGKCEP 131
Query 126 NSVAPTG-GAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDL 184
S AP G GAPG FLSAGGHY PGHTG P SGDL +L V DG+ L TDAF + L
Sbjct 132 QSTAPGGQGAPGAFLSAGGHYQAPGHTGMPMSGDLTNLLVMKDGTGKLTLETDAFQLSQL 191
Query 185 LSGAKTAIIIHAGADNFANIPPERYVQVN-GTPGPDETTLTTGDAGKRVACGVI 237
SGA T+II+H A NF NIP +RY G P PDETT+ T DAG R CGVI
Sbjct 192 DSGAGTSIIVHDKASNFGNIPADRYKSAQEGGPVPDETTMKTEDAGGRAVCGVI 245
>gi|296168778|ref|ZP_06850464.1| copper/zinc superoxide dismutase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896539|gb|EFG76184.1| copper/zinc superoxide dismutase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=254
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/171 (53%), Positives = 108/171 (64%), Gaps = 19/171 (11%)
Query 67 PGAQSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPN 126
PG++ +T+ L + DG +VA A +FANGYATVT+ L+PGFHGL IH VGKCE N
Sbjct 40 PGSERITTQLKSADGNQVANATIDFANGYATVTVEAGPNQVLSPGFHGLQIHSVGKCEAN 99
Query 127 SVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLS 186
S AP GGA G+F SAG Y P HTG PASGDL +LQVR DGSA LVTTT+ T DL +
Sbjct 100 SAAPGGGATGDFNSAGSVYQAPDHTGFPASGDLTALQVRNDGSAKLVTTTNLLTASDLRN 159
Query 187 GAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVI 237
+ TA+IIH ADN T TG++GKRVACGV+
Sbjct 160 SSGTALIIHQTADNL-------------------TGSATGESGKRVACGVL 191
>gi|317506341|ref|ZP_07964153.1| copper/zinc superoxide dismutase [Segniliparus rugosus ATCC BAA-974]
gi|316255351|gb|EFV14609.1| copper/zinc superoxide dismutase [Segniliparus rugosus ATCC BAA-974]
Length=242
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/238 (46%), Positives = 132/238 (56%), Gaps = 19/238 (7%)
Query 14 STSVLSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLSG-------HDEES 66
S S++ A+ A A L+ C++ + STV G+ S G PA SG+S E
Sbjct 6 SKSIIRAVGAFAALAALAGCTNSEQDSTVGGSGASPKAG-PAHSGVSSAPAKRGPSAAEG 64
Query 67 PG----AQSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGK 122
G A L G T +F + IA G L PGFHG+HIH VGK
Sbjct 65 KGGADHADHKVVELKNAQGADSGTVEFTQTGDKVVIKIAVKG---LAPGFHGVHIHAVGK 121
Query 123 CEPNSVAPTG-GAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTM 181
CEPNS AP G GAPG FLS+GGHY VPGHTG P SGDL +L V DG+ L T+AF +
Sbjct 122 CEPNSTAPNGQGAPGAFLSSGGHYQVPGHTGMPMSGDLTNLLVLKDGTGELTQETEAFHL 181
Query 182 DDLLSGAKTAIIIHAGADNFANIPPERY--VQVNGTPGPDETTLTTGDAGKRVACGVI 237
L G+ T+II+H A NFANIP +RY + +G PDETT+ T DAG R CGVI
Sbjct 182 SQLADGSGTSIIVHEKASNFANIPADRYKSAKEDGQV-PDETTMNTEDAGGRAVCGVI 238
>gi|333918228|ref|YP_004491809.1| Superoxide dismutase [Amycolicicoccus subflavus DQS3-9A1]
gi|333480449|gb|AEF39009.1| Superoxide dismutase [Amycolicicoccus subflavus DQS3-9A1]
Length=228
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/221 (43%), Positives = 121/221 (55%), Gaps = 20/221 (9%)
Query 29 LLSACSSPQHA-STVPGTTPS--IWTGSPAPSGLSGHDEE------SPGAQSLTSTLTAP 79
++S C++P A ST+ P +WTG P P ++E SPG ++L + L
Sbjct 12 IISGCAAPYEAPSTMTEEVPPPPVWTGEPEPVDFHEDEDEHGDESSSPG-RTLEAQLALA 70
Query 80 DGTKVATAKFEFANGYATVT-IATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNF 138
DGT++ F + + + L+PGF G HIH+VG CE F
Sbjct 71 DGTEIGLVTFSETEDFLRIRAVIQADPDDLSPGFKGFHIHEVGACEAED------GEDAF 124
Query 139 LSAGGHYHVPG--HTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHA 196
SAGGH + G H GT ASGDL S+Q+ +G A LVT TD T+DDLL G T++I+H
Sbjct 125 TSAGGHLDLEGATHEGTGASGDLVSIQILENGRAELVTLTDRVTVDDLLIGDGTSVIVHE 184
Query 197 GADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVI 237
G DNFANI P+RY G PDE TL TGDAG R ACGVI
Sbjct 185 GPDNFANI-PDRYEHAEGDDVPDEQTLATGDAGARAACGVI 224
>gi|126436993|ref|YP_001072684.1| copper/zinc binding superoxide dismutase [Mycobacterium sp. JLS]
gi|126236793|gb|ABO00194.1| superoxide dismutase, copper/zinc binding protein [Mycobacterium
sp. JLS]
Length=219
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/166 (49%), Positives = 98/166 (60%), Gaps = 21/166 (12%)
Query 72 LTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPT 131
+T+ L DG VA A +F GYATVT+ T G G L+PGFHGLHIH+ G+CEPNS AP
Sbjct 1 MTTQLKTVDGKAVADATIDFTGGYATVTVETVGDGTLSPGFHGLHIHEFGRCEPNSPAPN 60
Query 132 GGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTA 191
GG G+F S+G H+ G+TG PASGDL L VR DG+ LV TTDAFT D L ++
Sbjct 61 GGPTGDFASSGEHFQAEGNTGMPASGDLPPLLVRSDGAGKLVVTTDAFTEDQLKGPDGSS 120
Query 192 IIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVI 237
I++H GAD PG E T R+ACGVI
Sbjct 121 ILLHQGAD---------------MPGATEGVDT------RIACGVI 145
>gi|108801159|ref|YP_641356.1| copper/zinc binding superoxide dismutase protein [Mycobacterium
sp. MCS]
gi|119870291|ref|YP_940243.1| copper/zinc binding superoxide dismutase [Mycobacterium sp. KMS]
gi|108771578|gb|ABG10300.1| superoxide dismutase, copper/zinc binding protein [Mycobacterium
sp. MCS]
gi|119696380|gb|ABL93453.1| superoxide dismutase, copper/zinc binding protein [Mycobacterium
sp. KMS]
Length=219
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/166 (49%), Positives = 98/166 (60%), Gaps = 21/166 (12%)
Query 72 LTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPT 131
+T+ L DG VA A +F GYATVT+ T G G L+PGFHGLHIH+ G+CEPNS AP
Sbjct 1 MTTQLKTVDGKAVADATIDFTGGYATVTVETVGDGTLSPGFHGLHIHEFGRCEPNSPAPN 60
Query 132 GGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTA 191
GG G+F S+G H+ G+TG PASGDL L VR DG+ LV TTDAFT D L ++
Sbjct 61 GGPTGDFASSGEHFQAEGNTGMPASGDLPPLLVRSDGAGKLVVTTDAFTEDQLKGPDGSS 120
Query 192 IIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVI 237
I++H GAD PG E T R+ACGVI
Sbjct 121 ILLHQGAD---------------MPGATEGVDT------RIACGVI 145
>gi|343925512|ref|ZP_08765031.1| superoxide dismutase [Gordonia alkanivorans NBRC 16433]
gi|343764604|dbj|GAA11957.1| superoxide dismutase [Gordonia alkanivorans NBRC 16433]
Length=226
Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/211 (43%), Positives = 117/211 (56%), Gaps = 17/211 (8%)
Query 30 LSACSSPQHASTVPGTTPSIWTGSPAPSGLSGHDEESPGAQSLTSTLTAPDGTKVATAKF 89
L+ CS Q+ + VPGTTP + + P P G + + ++ P Q T+ + G V A F
Sbjct 26 LAGCSPDQNPTDVPGTTPPVISDKPLPPGAADNVDDEPSGQVATAEIKDTSGKVVGEATF 85
Query 90 EFA---NGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNFLSAGGHYH 146
+G TV++ T G L GFHG+HIH+ G C+ A +GGA F SAGGH
Sbjct 86 SAESQGDGPVTVSVRVTD-GDLPAGFHGMHIHENGTCD----AGSGGAQA-FTSAGGHLQ 139
Query 147 VPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGADNFANIPP 206
V G T PASGDL S+ + D + VTTTDA +D + AI+IH DNF NIP
Sbjct 140 VDGSTSHPASGDLVSINILEDHTGRTVTTTDAVKLDQVFG---KAIMIHEKPDNFGNIPA 196
Query 207 ERYVQVNGTPGPDETTLTTGDAGKRVACGVI 237
++Y GP E TL TGDAG R+ACGVI
Sbjct 197 DKY-----PGGPKEETLKTGDAGSRIACGVI 222
>gi|254823106|ref|ZP_05228107.1| superoxide dismutase, Cu-Zn [Mycobacterium intracellulare ATCC
13950]
Length=244
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/208 (44%), Positives = 112/208 (54%), Gaps = 46/208 (22%)
Query 30 LSACSSPQHASTVPGTTPSIWTGSPAPSGLSGHDEESPGAQSLTSTLTAPDGTKVATAKF 89
L+AC++ Q + P T+P SPAP GA+ LT+ L DG VA A
Sbjct 19 LAACANQQGSQ--PNTSPLT---SPAP-----------GAERLTTQLKTADGIPVANATV 62
Query 90 EFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNFLSAGGHYHVPG 149
EFANGYATVT+ L+PGFHGL IH VGKCE G+F SAG Y
Sbjct 63 EFANGYATVTVEAGPNQVLSPGFHGLQIHSVGKCE-----------GDFDSAGSVYQAAD 111
Query 150 HTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGADNFANIPPERY 209
HTG PASGDL +LQVR DGSA LVTT+++FT DL S + +A+I+H DN P
Sbjct 112 HTGYPASGDLTALQVRSDGSAKLVTTSNSFTAADLRSSSGSALILHQSVDNLGGGP---- 167
Query 210 VQVNGTPGPDETTLTTGDAGKRVACGVI 237
T ++ KR+ACGVI
Sbjct 168 ---------------TAESNKRIACGVI 180
>gi|259507871|ref|ZP_05750771.1| superoxide dismutase [Corynebacterium efficiens YS-314]
gi|259164664|gb|EEW49218.1| superoxide dismutase [Corynebacterium efficiens YS-314]
Length=261
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/170 (48%), Positives = 105/170 (62%), Gaps = 11/170 (6%)
Query 71 SLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAP 130
LT+ +T +G +V TA+F +G ++T+ G + PGF+GLHIHQ+G CE +S AP
Sbjct 101 DLTAAVTTAEGAEVGTAEFREQDGAVSITV---GFNDMEPGFYGLHIHQIGVCETDSAAP 157
Query 131 TG-GAPGNFLSAGGHYHVPGHTGTPAS-GDLASLQVRGDGSAMLVTTTDAFTMDDLLSGA 188
G+FLSAG H G + P GDL L V+ DG+A++ TD FT+ DL
Sbjct 158 DNPDNTGDFLSAGSHLGA-GESDHPDHPGDLPQLLVKNDGTAVMTVETDRFTLADLEDDD 216
Query 189 KTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIG 238
+A++IH+ ADNFANI PERY G DE TL TGDAG R+ACGVIG
Sbjct 217 GSALMIHSDADNFANI-PERY----SPDGADEDTLGTGDAGSRLACGVIG 261
>gi|25028806|ref|NP_738860.1| putative superoxide dismutase [Corynebacterium efficiens YS-314]
gi|23494092|dbj|BAC19060.1| putative superoxide dismutase [Corynebacterium efficiens YS-314]
Length=303
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/170 (48%), Positives = 105/170 (62%), Gaps = 11/170 (6%)
Query 71 SLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAP 130
LT+ +T +G +V TA+F +G ++T+ G + PGF+GLHIHQ+G CE +S AP
Sbjct 143 DLTAAVTTAEGAEVGTAEFREQDGAVSITV---GFNDMEPGFYGLHIHQIGVCETDSAAP 199
Query 131 TG-GAPGNFLSAGGHYHVPGHTGTPAS-GDLASLQVRGDGSAMLVTTTDAFTMDDLLSGA 188
G+FLSAG H G + P GDL L V+ DG+A++ TD FT+ DL
Sbjct 200 DNPDNTGDFLSAGSHLGA-GESDHPDHPGDLPQLLVKNDGTAVMTVETDRFTLADLEDDD 258
Query 189 KTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIG 238
+A++IH+ ADNFANI PERY G DE TL TGDAG R+ACGVIG
Sbjct 259 GSALMIHSDADNFANI-PERY----SPDGADEDTLGTGDAGSRLACGVIG 303
>gi|262200674|ref|YP_003271882.1| superoxide dismutase copper/zinc-binding protein [Gordonia bronchialis
DSM 43247]
gi|262084021|gb|ACY19989.1| superoxide dismutase copper/zinc binding protein [Gordonia bronchialis
DSM 43247]
Length=218
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/231 (39%), Positives = 120/231 (52%), Gaps = 25/231 (10%)
Query 10 HAAVSTSVLSALF-LGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLSGHDEESPG 68
H + V++AL GA A+L+ C+ + + GTTPS+ +G P P G ++++ P
Sbjct 6 HRPTTLRVIAALASAGAIGAVLAGCTPDEPPTDAKGTTPSVISGPPLPPGSVQNEDDVPT 65
Query 69 AQSLTSTLTAPDGTKVATAKFEFAN--GYATVTIATTGVGKLTPGFHGLHIHQVGKCEPN 126
Q + + PDG V A F N G TV + TG G + PGFHG+HIH G+C
Sbjct 66 GQQAKAEIKNPDGEVVGEATFTARNPDGPVTVNVRVTG-GDIAPGFHGMHIHANGQC--- 121
Query 127 SVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLS 186
AP G +F +AGGH V P+SGDL S+ + D + VTTTD + ++
Sbjct 122 --APKDGE--DFGAAGGHLQVGAANAHPSSGDLVSINILNDHTGETVTTTDRVKLSQIVD 177
Query 187 GAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVI 237
+IIIH DNF N+ P P E TL TGDAG RVACGVI
Sbjct 178 ---KSIIIHEKPDNFGNV-----------PNPSEKTLMTGDAGARVACGVI 214
Lambda K H
0.312 0.130 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 332206503090
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40