BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0434
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607575|ref|NP_214948.1| hypothetical protein Rv0434 [Mycoba... 426 8e-118
gi|15839821|ref|NP_334858.1| hypothetical protein MT0449 [Mycoba... 426 9e-118
gi|31791612|ref|NP_854105.1| hypothetical protein Mb0442 [Mycoba... 425 3e-117
gi|340625459|ref|YP_004743911.1| hypothetical protein MCAN_04321... 423 8e-117
gi|289441814|ref|ZP_06431558.1| conserved hypothetical protein [... 422 2e-116
gi|308375157|ref|ZP_07442911.2| hypothetical protein TMGG_03441 ... 410 6e-113
gi|254818944|ref|ZP_05223945.1| hypothetical protein MintA_03411... 291 5e-77
gi|240168911|ref|ZP_04747570.1| hypothetical protein MkanA1_0634... 283 9e-75
gi|342859075|ref|ZP_08715729.1| hypothetical protein MCOL_09363 ... 282 2e-74
gi|183980775|ref|YP_001849066.1| hypothetical protein MMAR_0751 ... 280 1e-73
gi|118617067|ref|YP_905399.1| hypothetical protein MUL_1383 [Myc... 275 3e-72
gi|296167945|ref|ZP_06850089.1| ATP-dependent protease La domain... 275 5e-72
gi|294995938|ref|ZP_06801629.1| hypothetical protein Mtub2_15918... 273 1e-71
gi|254777159|ref|ZP_05218675.1| ATP-dependent protease La [Mycob... 272 3e-71
gi|41410021|ref|NP_962857.1| hypothetical protein MAP3923 [Mycob... 269 2e-70
gi|118463030|ref|YP_883847.1| ATP-dependent protease La [Mycobac... 267 7e-70
gi|120401752|ref|YP_951581.1| peptidase S16, lon domain-containi... 260 1e-67
gi|145220775|ref|YP_001131453.1| peptidase S16, lon domain-conta... 254 4e-66
gi|333989048|ref|YP_004521662.1| hypothetical protein JDM601_040... 238 4e-61
gi|108797555|ref|YP_637752.1| peptidase S16, lon-like protein [M... 233 1e-59
gi|118468409|ref|YP_885243.1| ATP-dependent protease La [Mycobac... 227 7e-58
gi|169631243|ref|YP_001704892.1| hypothetical protein MAB_4165 [... 202 2e-50
gi|111019345|ref|YP_702317.1| endopeptidase La [Rhodococcus jost... 187 9e-46
gi|226361483|ref|YP_002779261.1| hypothetical protein ROP_20690 ... 183 1e-44
gi|229488716|ref|ZP_04382582.1| peptidase S16, lon domain protei... 179 2e-43
gi|226308751|ref|YP_002768711.1| hypothetical protein RER_52640 ... 179 3e-43
gi|312141778|ref|YP_004009114.1| ATP-dependent serine peptidase ... 174 7e-42
gi|325672964|ref|ZP_08152658.1| ATP-dependent protease La domain... 174 9e-42
gi|333922114|ref|YP_004495695.1| ATP-dependent protease La domai... 167 8e-40
gi|296140648|ref|YP_003647891.1| peptidase S16 [Tsukamurella pau... 147 8e-34
gi|326384932|ref|ZP_08206606.1| peptidase S16 lon domain protein... 134 1e-29
gi|262200955|ref|YP_003272163.1| peptidase S16 lon domain-contai... 127 1e-27
gi|343925909|ref|ZP_08765424.1| putative peptidase S16 family pr... 109 3e-22
gi|311742125|ref|ZP_07715935.1| ATP-dependent protease La domain... 105 7e-21
gi|323356515|ref|YP_004222911.1| hypothetical protein MTES_0067 ... 101 7e-20
gi|163846826|ref|YP_001634870.1| peptidase S16 lon domain-contai... 89.7 3e-16
gi|159900220|ref|YP_001546467.1| peptidase S16 lon domain-contai... 80.1 2e-13
gi|269926519|ref|YP_003323142.1| peptidase S16 lon domain protei... 79.7 3e-13
gi|219849203|ref|YP_002463636.1| peptidase S16 lon domain-contai... 79.0 5e-13
gi|317123247|ref|YP_004097359.1| peptidase S16 [Intrasporangium ... 75.5 4e-12
gi|152981631|ref|YP_001354811.1| hypothetical protein mma_3121 [... 70.5 2e-10
gi|345303598|ref|YP_004825500.1| peptidase S16 lon domain-contai... 69.3 4e-10
gi|340785812|ref|YP_004751277.1| hypothetical protein CFU_0618 [... 68.9 5e-10
gi|157273497|gb|ABV27396.1| ATP-dependent protease La domain pro... 68.9 5e-10
gi|269127111|ref|YP_003300481.1| peptidase S16 lon domain-contai... 68.6 6e-10
gi|300692623|ref|YP_003753618.1| peptidase, S16 family [Ralstoni... 68.6 6e-10
gi|344173554|emb|CCA88721.1| putative peptidase, S16 family [Ral... 68.6 6e-10
gi|298245103|ref|ZP_06968909.1| peptidase S16 lon domain protein... 68.6 7e-10
gi|304394429|ref|ZP_07376352.1| ATP-dependent protease La protei... 68.2 8e-10
gi|268317346|ref|YP_003291065.1| peptidase S16 lon domain-contai... 67.4 1e-09
>gi|15607575|ref|NP_214948.1| hypothetical protein Rv0434 [Mycobacterium tuberculosis H37Rv]
gi|148660199|ref|YP_001281722.1| hypothetical protein MRA_0439 [Mycobacterium tuberculosis H37Ra]
gi|148821630|ref|YP_001286384.1| hypothetical protein TBFG_10439 [Mycobacterium tuberculosis F11]
46 more sequence titles
Length=217
Score = 426 bits (1096), Expect = 8e-118, Method: Compositional matrix adjust.
Identities = 217/217 (100%), Positives = 217/217 (100%), Gaps = 0/217 (0%)
Query 1 MADFAPVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVG 60
MADFAPVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVG
Sbjct 1 MADFAPVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVG 60
Query 61 GGDTRCDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGH 120
GGDTRCDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGH
Sbjct 61 GGDTRCDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGH 120
Query 121 PVTAAQLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMG 180
PVTAAQLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMG
Sbjct 121 PVTAAQLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMG 180
Query 181 PADRYAVLATPSAADRLVRLGDALDSVAAMVEFELST 217
PADRYAVLATPSAADRLVRLGDALDSVAAMVEFELST
Sbjct 181 PADRYAVLATPSAADRLVRLGDALDSVAAMVEFELST 217
>gi|15839821|ref|NP_334858.1| hypothetical protein MT0449 [Mycobacterium tuberculosis CDC1551]
gi|253797358|ref|YP_003030359.1| hypothetical protein TBMG_00435 [Mycobacterium tuberculosis KZN
1435]
gi|254230784|ref|ZP_04924111.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|13879953|gb|AAK44672.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
gi|124599843|gb|EAY58853.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|253318861|gb|ACT23464.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|339293484|gb|AEJ45595.1| hypothetical protein CCDC5079_0405 [Mycobacterium tuberculosis
CCDC5079]
gi|339297127|gb|AEJ49237.1| hypothetical protein CCDC5180_0400 [Mycobacterium tuberculosis
CCDC5180]
Length=218
Score = 426 bits (1096), Expect = 9e-118, Method: Compositional matrix adjust.
Identities = 217/217 (100%), Positives = 217/217 (100%), Gaps = 0/217 (0%)
Query 1 MADFAPVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVG 60
MADFAPVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVG
Sbjct 2 MADFAPVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVG 61
Query 61 GGDTRCDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGH 120
GGDTRCDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGH
Sbjct 62 GGDTRCDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGH 121
Query 121 PVTAAQLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMG 180
PVTAAQLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMG
Sbjct 122 PVTAAQLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMG 181
Query 181 PADRYAVLATPSAADRLVRLGDALDSVAAMVEFELST 217
PADRYAVLATPSAADRLVRLGDALDSVAAMVEFELST
Sbjct 182 PADRYAVLATPSAADRLVRLGDALDSVAAMVEFELST 218
>gi|31791612|ref|NP_854105.1| hypothetical protein Mb0442 [Mycobacterium bovis AF2122/97]
gi|121636348|ref|YP_976571.1| hypothetical protein BCG_0473 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224988820|ref|YP_002643507.1| hypothetical protein JTY_0443 [Mycobacterium bovis BCG str. Tokyo
172]
16 more sequence titles
Length=217
Score = 425 bits (1092), Expect = 3e-117, Method: Compositional matrix adjust.
Identities = 216/217 (99%), Positives = 216/217 (99%), Gaps = 0/217 (0%)
Query 1 MADFAPVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVG 60
MADFAPVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVG
Sbjct 1 MADFAPVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVG 60
Query 61 GGDTRCDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGH 120
GGDTRCDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGH
Sbjct 61 GGDTRCDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGH 120
Query 121 PVTAAQLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMG 180
PVTAAQLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMG
Sbjct 121 PVTAAQLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMG 180
Query 181 PADRYAVLATPSAADRLVRLGDALDSVAAMVEFELST 217
PADRYAVLA PSAADRLVRLGDALDSVAAMVEFELST
Sbjct 181 PADRYAVLAAPSAADRLVRLGDALDSVAAMVEFELST 217
>gi|340625459|ref|YP_004743911.1| hypothetical protein MCAN_04321 [Mycobacterium canettii CIPT
140010059]
gi|340003649|emb|CCC42772.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=217
Score = 423 bits (1088), Expect = 8e-117, Method: Compositional matrix adjust.
Identities = 215/217 (99%), Positives = 216/217 (99%), Gaps = 0/217 (0%)
Query 1 MADFAPVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVG 60
MADFAPVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVG
Sbjct 1 MADFAPVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVG 60
Query 61 GGDTRCDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGH 120
GGDTRCDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGH
Sbjct 61 GGDTRCDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGH 120
Query 121 PVTAAQLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMG 180
PVTAAQLLEVEDRVVALFERIAAARGVRLPAR+VVLGYPVVDPADTGQRLYALACRVPMG
Sbjct 121 PVTAAQLLEVEDRVVALFERIAAARGVRLPARDVVLGYPVVDPADTGQRLYALACRVPMG 180
Query 181 PADRYAVLATPSAADRLVRLGDALDSVAAMVEFELST 217
PADRYAVLA PSAADRLVRLGDALDSVAAMVEFELST
Sbjct 181 PADRYAVLAAPSAADRLVRLGDALDSVAAMVEFELST 217
>gi|289441814|ref|ZP_06431558.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289414733|gb|EFD11973.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length=217
Score = 422 bits (1084), Expect = 2e-116, Method: Compositional matrix adjust.
Identities = 215/217 (99%), Positives = 215/217 (99%), Gaps = 0/217 (0%)
Query 1 MADFAPVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVG 60
MADFAPVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLI RGREVG
Sbjct 1 MADFAPVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLILRGREVG 60
Query 61 GGDTRCDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGH 120
GGDTRCDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGH
Sbjct 61 GGDTRCDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGH 120
Query 121 PVTAAQLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMG 180
PVTAAQLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMG
Sbjct 121 PVTAAQLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMG 180
Query 181 PADRYAVLATPSAADRLVRLGDALDSVAAMVEFELST 217
PADRYAVLA PSAADRLVRLGDALDSVAAMVEFELST
Sbjct 181 PADRYAVLAAPSAADRLVRLGDALDSVAAMVEFELST 217
>gi|308375157|ref|ZP_07442911.2| hypothetical protein TMGG_03441 [Mycobacterium tuberculosis SUMu007]
gi|308347252|gb|EFP36103.1| hypothetical protein TMGG_03441 [Mycobacterium tuberculosis SUMu007]
Length=209
Score = 410 bits (1054), Expect = 6e-113, Method: Compositional matrix adjust.
Identities = 208/209 (99%), Positives = 209/209 (100%), Gaps = 0/209 (0%)
Query 9 LAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRCDV 68
+AMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRCDV
Sbjct 1 MAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRCDV 60
Query 69 GTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQLL 128
GTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQLL
Sbjct 61 GTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQLL 120
Query 129 EVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMGPADRYAVL 188
EVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMGPADRYAVL
Sbjct 121 EVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMGPADRYAVL 180
Query 189 ATPSAADRLVRLGDALDSVAAMVEFELST 217
ATPSAADRLVRLGDALDSVAAMVEFELST
Sbjct 181 ATPSAADRLVRLGDALDSVAAMVEFELST 209
>gi|254818944|ref|ZP_05223945.1| hypothetical protein MintA_03411 [Mycobacterium intracellulare
ATCC 13950]
Length=212
Score = 291 bits (744), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 147/210 (70%), Positives = 174/210 (83%), Gaps = 3/210 (1%)
Query 7 VELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRC 66
+ELAMFPLESA LPD+DLPL IFEPRY ALVR C+DT DP FGVVLISRGREVGGG+ RC
Sbjct 5 LELAMFPLESALLPDQDLPLRIFEPRYGALVRHCVDTGDP-FGVVLISRGREVGGGEERC 63
Query 67 DVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQ 126
DVG L+RITEC D G+GRY LRCR GERIRV +WLPDDPYPRA++ WPD+PG V+ AQ
Sbjct 64 DVGVLSRITECVDQGAGRYALRCRTGERIRVREWLPDDPYPRARITLWPDEPGPEVSPAQ 123
Query 127 LLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMGPADRYA 186
LL+VEDR VALFERIA ARG+ LP REV+LG+ PA G+RL+ALA R+P+G ADRY
Sbjct 124 LLDVEDRAVALFERIAQARGITLPGREVLLGHDPQAPA--GERLFALASRIPIGTADRYT 181
Query 187 VLATPSAADRLVRLGDALDSVAAMVEFELS 216
VLA P+AA+RL L +A+++VA +VEF+LS
Sbjct 182 VLAAPTAAERLAALSEAVNAVAEVVEFQLS 211
>gi|240168911|ref|ZP_04747570.1| hypothetical protein MkanA1_06340 [Mycobacterium kansasii ATCC
12478]
Length=215
Score = 283 bits (725), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 153/216 (71%), Positives = 178/216 (83%), Gaps = 2/216 (0%)
Query 1 MADFAPVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVG 60
MA FAPVEL MFPLE+A LP +DLPL IFEPRY ALVR C + DP FGVVLISRGREVG
Sbjct 1 MAPFAPVELPMFPLETALLPGQDLPLRIFEPRYTALVRHCTGSGDP-FGVVLISRGREVG 59
Query 61 GGDTRCDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGH 120
GG+TRCDVGTLA I ECA+ G GRY+LRCR GERIRV +WLPDDPYPRA + WPD+PG
Sbjct 60 GGETRCDVGTLANIEECAELGLGRYLLRCRTGERIRVAEWLPDDPYPRAIAQSWPDEPGE 119
Query 121 PVTAAQLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMG 180
PVT AQLL++EDRV+ALFERIA+ RG +LP R+ +LGY D ++ GQRLYALA R+PMG
Sbjct 120 PVTEAQLLQLEDRVMALFERIASTRGAQLPGRDELLGYGRAD-SEAGQRLYALASRIPMG 178
Query 181 PADRYAVLATPSAADRLVRLGDALDSVAAMVEFELS 216
ADRYAVL+ PSAA RL L +A+D+VAA+VEF+LS
Sbjct 179 TADRYAVLSAPSAAARLAALNEAVDAVAAIVEFQLS 214
>gi|342859075|ref|ZP_08715729.1| hypothetical protein MCOL_09363 [Mycobacterium colombiense CECT
3035]
gi|342133316|gb|EGT86519.1| hypothetical protein MCOL_09363 [Mycobacterium colombiense CECT
3035]
Length=212
Score = 282 bits (721), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 146/211 (70%), Positives = 169/211 (81%), Gaps = 3/211 (1%)
Query 6 PVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTR 65
P ELAMFPLESA LP +DLPL IFEPRY ALVR C DT DP FGVVLISRGREVGGGD R
Sbjct 4 PFELAMFPLESALLPGQDLPLRIFEPRYGALVRHCTDTGDP-FGVVLISRGREVGGGDAR 62
Query 66 CDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAA 125
CDVG L+RITEC D G+GRY L CR GERIRV +WLPDDPYPRA V WPD+PG VT
Sbjct 63 CDVGVLSRITECVDQGAGRYALNCRTGERIRVSEWLPDDPYPRATVTPWPDEPGAAVTDD 122
Query 126 QLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMGPADRY 185
QLL+VEDR +ALFERIA AR ++LP R+V+LG P G+RL+ALA R+P+G ADRY
Sbjct 123 QLLDVEDRAMALFERIAQARDIKLPGRDVILGDDRGGPP--GERLFALASRIPIGTADRY 180
Query 186 AVLATPSAADRLVRLGDALDSVAAMVEFELS 216
+VL+ P+AADRLV L +A+D+VA +VEF+LS
Sbjct 181 SVLSAPTAADRLVALREAVDAVAEVVEFQLS 211
>gi|183980775|ref|YP_001849066.1| hypothetical protein MMAR_0751 [Mycobacterium marinum M]
gi|183174101|gb|ACC39211.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=218
Score = 280 bits (715), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 146/212 (69%), Positives = 166/212 (79%), Gaps = 2/212 (0%)
Query 6 PVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTR 65
P E MFPLE+A LP +DLPL IFEPRY+ALVR C+DT DP FGVVLI+ GREVGGG++R
Sbjct 7 PFEAPMFPLEAAMLPGQDLPLRIFEPRYSALVRHCLDTGDP-FGVVLIAGGREVGGGESR 65
Query 66 CDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAA 125
DVGTLARITE D G+GRY L CR GERIRVCDWLPDDPYPRA V+ WPD+PG V+AA
Sbjct 66 YDVGTLARITEYVDEGAGRYQLLCRTGERIRVCDWLPDDPYPRATVQIWPDEPGAAVSAA 125
Query 126 QLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVD-PADTGQRLYALACRVPMGPADR 184
Q + EDRV+ALFERIA ARG+ LP R+VV Y D AD G LY LA RVPMGPAD
Sbjct 126 QFRDTEDRVMALFERIATARGIELPDRDVVFDYQSDDIAADAGTLLYELASRVPMGPADG 185
Query 185 YAVLATPSAADRLVRLGDALDSVAAMVEFELS 216
YAVL+ SAADRL L +A+DSV AMV+F+LS
Sbjct 186 YAVLSARSAADRLAALAEAVDSVEAMVDFQLS 217
>gi|118617067|ref|YP_905399.1| hypothetical protein MUL_1383 [Mycobacterium ulcerans Agy99]
gi|118569177|gb|ABL03928.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=218
Score = 275 bits (703), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 144/212 (68%), Positives = 164/212 (78%), Gaps = 2/212 (0%)
Query 6 PVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTR 65
P E MFPLE+ LP +DLPL IFEPR +ALVR C+DT DP FGVVLI+ GREVGGG++R
Sbjct 7 PFEAPMFPLEATMLPGQDLPLRIFEPRDSALVRHCLDTGDP-FGVVLIAGGREVGGGESR 65
Query 66 CDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAA 125
DVGTLARITE D G+GRY L CR GERIRVCDWLPDDPYPRA V+ WPD+PG V+AA
Sbjct 66 YDVGTLARITEYVDEGAGRYQLLCRTGERIRVCDWLPDDPYPRATVQIWPDEPGAAVSAA 125
Query 126 QLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVD-PADTGQRLYALACRVPMGPADR 184
Q + EDRV+ALFERIA ARG+ LP R+VV Y D AD G LY LA RVPMGPAD
Sbjct 126 QFRDTEDRVMALFERIATARGIELPGRDVVFDYQSDDIAADAGTLLYELASRVPMGPADG 185
Query 185 YAVLATPSAADRLVRLGDALDSVAAMVEFELS 216
YAVL+ SAADRL L +A+DSV AMV+F+LS
Sbjct 186 YAVLSARSAADRLAALAEAVDSVEAMVDFQLS 217
>gi|296167945|ref|ZP_06850089.1| ATP-dependent protease La domain family protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295896935|gb|EFG76561.1| ATP-dependent protease La domain family protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length=208
Score = 275 bits (702), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 145/211 (69%), Positives = 168/211 (80%), Gaps = 5/211 (2%)
Query 7 VELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRC 66
+ELAMFPLES LPD+DLPL IFEPRYAALVR C+DT DP FGVVLISRGREVGGGD+RC
Sbjct 1 MELAMFPLESVLLPDQDLPLRIFEPRYAALVRHCLDTGDP-FGVVLISRGREVGGGDSRC 59
Query 67 DVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQ 126
+VG A ITEC + G+GRY + CR GERIRV WLPDDPYPRA V WPD+PG PVTAAQ
Sbjct 60 EVGVSATITECVEHGAGRYSILCRTGERIRVSAWLPDDPYPRATVTPWPDEPGEPVTAAQ 119
Query 127 LLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPA-DTGQRLYALACRVPMGPADRY 185
LL+VEDR +ALF RIA ARGV LP R +LG DPA D G+RLY LA R+P+G ADRY
Sbjct 120 LLDVEDRAMALFARIADARGVPLPDRAALLGE---DPAGDPGRRLYELAARIPIGTADRY 176
Query 186 AVLATPSAADRLVRLGDALDSVAAMVEFELS 216
VL+ PSA +R+ L +A+D+VA +VEF+LS
Sbjct 177 TVLSAPSAGERVAALREAVDAVAEVVEFQLS 207
>gi|294995938|ref|ZP_06801629.1| hypothetical protein Mtub2_15918 [Mycobacterium tuberculosis
210]
Length=163
Score = 273 bits (698), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 138/138 (100%), Positives = 138/138 (100%), Gaps = 0/138 (0%)
Query 80 AGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQLLEVEDRVVALFE 139
AGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQLLEVEDRVVALFE
Sbjct 26 AGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQLLEVEDRVVALFE 85
Query 140 RIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMGPADRYAVLATPSAADRLVR 199
RIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMGPADRYAVLATPSAADRLVR
Sbjct 86 RIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMGPADRYAVLATPSAADRLVR 145
Query 200 LGDALDSVAAMVEFELST 217
LGDALDSVAAMVEFELST
Sbjct 146 LGDALDSVAAMVEFELST 163
>gi|254777159|ref|ZP_05218675.1| ATP-dependent protease La [Mycobacterium avium subsp. avium ATCC
25291]
Length=213
Score = 272 bits (695), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 142/212 (67%), Positives = 165/212 (78%), Gaps = 4/212 (1%)
Query 6 PVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTR 65
PV L MFPLESA LPD+DLPL IFEPRY ALVR C+DT + +FGVVLI+RGREVGGGD R
Sbjct 4 PVALPMFPLESALLPDQDLPLRIFEPRYGALVRHCLDTGE-QFGVVLIARGREVGGGDAR 62
Query 66 CDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAA 125
CDVG L+RI +C D G+GRY+L CR G+RIRV +WLPDDPYPRA V WPD+PG VT
Sbjct 63 CDVGVLSRIVDCVDQGAGRYLLNCRTGQRIRVSEWLPDDPYPRATVMPWPDEPGAVVTPE 122
Query 126 QLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPAD-TGQRLYALACRVPMGPADR 184
QLL VEDR VALFERIA ARG+ LP R+V+LG DP GQRLY LA R+P+G ADR
Sbjct 123 QLLGVEDRAVALFERIAQARGITLPGRDVLLGRH--DPERPVGQRLYELASRIPIGTADR 180
Query 185 YAVLATPSAADRLVRLGDALDSVAAMVEFELS 216
Y VL PSAA+RL L +A+D+V +VEF+LS
Sbjct 181 YTVLCAPSAAERLAALREAVDAVTEVVEFQLS 212
>gi|41410021|ref|NP_962857.1| hypothetical protein MAP3923 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398854|gb|AAS06473.1| hypothetical protein MAP_3923 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336460335|gb|EGO39235.1| peptidase S16, lon domain protein [Mycobacterium avium subsp.
paratuberculosis S397]
Length=213
Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/212 (67%), Positives = 164/212 (78%), Gaps = 4/212 (1%)
Query 6 PVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTR 65
PV L MFPLESA LPD+DLPL IFEPRY ALVR C+DT + +FGVVLI+RGREVGGGD R
Sbjct 4 PVALPMFPLESALLPDQDLPLRIFEPRYGALVRHCLDTGE-QFGVVLIARGREVGGGDAR 62
Query 66 CDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAA 125
CDVG L+RI +C D G+GRY+L CR G+RIRV +WLPDDPYPRA V WPD+PG VT
Sbjct 63 CDVGVLSRIVDCVDQGAGRYLLNCRTGQRIRVSEWLPDDPYPRATVMPWPDEPGAAVTPE 122
Query 126 QLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPAD-TGQRLYALACRVPMGPADR 184
QL VEDR VALFERIA ARG+ LP R+V+LG DP GQRLY LA R+P+G ADR
Sbjct 123 QLRGVEDRAVALFERIAQARGITLPGRDVLLGRH--DPERPPGQRLYELASRIPIGTADR 180
Query 185 YAVLATPSAADRLVRLGDALDSVAAMVEFELS 216
Y VL PSAA+RL L +A+D+V +VEF+LS
Sbjct 181 YTVLCAPSAAERLAALREAVDAVTEVVEFQLS 212
>gi|118463030|ref|YP_883847.1| ATP-dependent protease La [Mycobacterium avium 104]
gi|118164317|gb|ABK65214.1| ATP-dependent protease La (LON) domain subfamily protein [Mycobacterium
avium 104]
Length=213
Score = 267 bits (683), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 140/212 (67%), Positives = 164/212 (78%), Gaps = 4/212 (1%)
Query 6 PVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTR 65
PV L MFPLESA LPD+DLPL IFEPRY ALVR C+DT + +FGVVLI+RGREVGGGD R
Sbjct 4 PVALPMFPLESALLPDQDLPLRIFEPRYGALVRHCLDTGE-QFGVVLIARGREVGGGDAR 62
Query 66 CDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAA 125
CDVG L+RI +C D G+GRY+L CR G+RIRV +WLPDDPYPRA V WPD+PG VT
Sbjct 63 CDVGVLSRIVDCVDQGAGRYLLNCRTGQRIRVSEWLPDDPYPRATVMPWPDEPGAVVTPE 122
Query 126 QLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPAD-TGQRLYALACRVPMGPADR 184
QL VEDR VALFERIA ARG+ LP R+++LG DP GQRLY LA R+P+G ADR
Sbjct 123 QLRGVEDRAVALFERIAQARGITLPGRDLLLGRH--DPERPPGQRLYELASRIPIGTADR 180
Query 185 YAVLATPSAADRLVRLGDALDSVAAMVEFELS 216
Y VL PSAA+RL L +A+D+V +VEF+LS
Sbjct 181 YTVLCAPSAAERLAALREAVDAVTEVVEFQLS 212
>gi|120401752|ref|YP_951581.1| peptidase S16, lon domain-containing protein [Mycobacterium vanbaalenii
PYR-1]
gi|119954570|gb|ABM11575.1| peptidase S16, lon domain protein [Mycobacterium vanbaalenii
PYR-1]
Length=210
Score = 260 bits (664), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/206 (63%), Positives = 157/206 (77%), Gaps = 2/206 (0%)
Query 11 MFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRCDVGT 70
MFPLE A LP E+LPL IFEPRY+ALV+ C+ DP FGVVLI+ GREVGGGDTR D+G
Sbjct 6 MFPLEVAMLPGEELPLRIFEPRYSALVQACLAAEDPAFGVVLIAAGREVGGGDTRSDIGA 65
Query 71 LARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQLLEV 130
LA I EC D GSGRY L+C +GERIRV +WLPDDPYPRA V WPD+PG V + ++
Sbjct 66 LAHIAECVDMGSGRYRLKCVIGERIRVLEWLPDDPYPRAVVELWPDEPGQAVDVEAIQDI 125
Query 131 EDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMGPADRYAVLAT 190
EDR+VALFERIAAARG ++ AR++V G + + + LYAL R+PMG ADRY+VLA
Sbjct 126 EDRMVALFERIAAARGAQVNARDIVAGAD--ESGEAAKWLYALTARLPMGQADRYSVLAA 183
Query 191 PSAADRLVRLGDALDSVAAMVEFELS 216
PSAA+R+ L +A+D+V AMVEF+LS
Sbjct 184 PSAAERVTALSEAVDTVTAMVEFQLS 209
>gi|145220775|ref|YP_001131453.1| peptidase S16, lon domain-containing protein [Mycobacterium gilvum
PYR-GCK]
gi|315442271|ref|YP_004075150.1| peptidase S16, lon domain protein [Mycobacterium sp. Spyr1]
gi|145213261|gb|ABP42665.1| peptidase S16, lon domain protein [Mycobacterium gilvum PYR-GCK]
gi|315260574|gb|ADT97315.1| peptidase S16, lon domain protein [Mycobacterium sp. Spyr1]
Length=210
Score = 254 bits (650), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 131/208 (63%), Positives = 158/208 (76%), Gaps = 2/208 (0%)
Query 9 LAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRCDV 68
L MFPLE A LP E+LPL IFEPRY+ALVR C+ DP FGVVLI+ GREVGGGD R DV
Sbjct 4 LPMFPLEVAMLPGEELPLRIFEPRYSALVRACLAAEDPVFGVVLIAAGREVGGGDARSDV 63
Query 69 GTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQLL 128
G LARITE +D G+GRY L+C + ERIRV +WLPDDPYPRA ++ WPD+PG PV A +
Sbjct 64 GALARITEHSDLGAGRYRLKCVMAERIRVLEWLPDDPYPRAVMQEWPDEPGGPVDFAAIR 123
Query 129 EVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMGPADRYAVL 188
++EDR+V LFERIA ARG ++ AR++V G D D Q LYAL R+PMG ADRYA+L
Sbjct 124 DIEDRMVGLFERIATARGAQVNARDIVHGAD--DSGDPAQWLYALTARLPMGQADRYAIL 181
Query 189 ATPSAADRLVRLGDALDSVAAMVEFELS 216
A PS ADR+ L +A+D+V AMVEF+LS
Sbjct 182 AAPSVADRVAALSEAVDTVIAMVEFQLS 209
>gi|333989048|ref|YP_004521662.1| hypothetical protein JDM601_0408 [Mycobacterium sp. JDM601]
gi|333485016|gb|AEF34408.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=214
Score = 238 bits (607), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 124/210 (60%), Positives = 152/210 (73%), Gaps = 1/210 (0%)
Query 7 VELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRC 66
+EL MFPLE LP E+L L IFE RY LV D M + DPRFGVVLI+RGREVGGG+ R
Sbjct 1 MELPMFPLEWVLLPGEELSLRIFERRYTVLVGDLMHSGDPRFGVVLIARGREVGGGEQRN 60
Query 67 DVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQ 126
D+G +A IT+C + G GRY LRC GERIRV WLPDDPYPRA + W D+PG PV+ Q
Sbjct 61 DIGAMAAITDCTELGGGRYALRCLTGERIRVSQWLPDDPYPRADIEVWRDEPGEPVSDRQ 120
Query 127 LLEVEDRVVALFERIAAARGVRLPA-REVVLGYPVVDPADTGQRLYALACRVPMGPADRY 185
E+E+R+VAL +R+A AR + A R+ +LG + D QRLY+LACRVPMG ADRY
Sbjct 121 FGELEERIVALHKRMAVARRRWVTAGRDAMLGGRRLRSLDPVQRLYSLACRVPMGEADRY 180
Query 186 AVLATPSAADRLVRLGDALDSVAAMVEFEL 215
AVLA PS +DRL L +A+++V+A VEFEL
Sbjct 181 AVLAAPSLSDRLTALYEAIETVSARVEFEL 210
>gi|108797555|ref|YP_637752.1| peptidase S16, lon-like protein [Mycobacterium sp. MCS]
gi|119866641|ref|YP_936593.1| peptidase S16, lon domain-containing protein [Mycobacterium sp.
KMS]
gi|126433177|ref|YP_001068868.1| peptidase S16, lon domain-containing protein [Mycobacterium sp.
JLS]
gi|108767974|gb|ABG06696.1| peptidase S16, lon-like protein [Mycobacterium sp. MCS]
gi|119692730|gb|ABL89803.1| peptidase S16, lon domain protein [Mycobacterium sp. KMS]
gi|126232977|gb|ABN96377.1| peptidase S16, lon domain protein [Mycobacterium sp. JLS]
Length=203
Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 124/206 (61%), Positives = 147/206 (72%), Gaps = 4/206 (1%)
Query 11 MFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRCDVGT 70
MFPLE LP E+LPL IFEPRY ALV+DC+ DP FGVVLI GREVGGGD R VG
Sbjct 1 MFPLEVTMLPGEELPLRIFEPRYVALVQDCLAMTDPAFGVVLIEAGREVGGGDRRSTVGA 60
Query 71 LARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQLLEV 130
LARI + AD G GR+ LRC +GERIRV WL D PYPRA + W D+PG V +A + +V
Sbjct 61 LARIVDYADLGVGRFRLRCLMGERIRVRQWLDDAPYPRADIEVWEDEPGA-VDSAAVFDV 119
Query 131 EDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMGPADRYAVLAT 190
EDRVVAL+ERIAAARG R VLG + +D +RLY LA RVPMG AD+YAVL+
Sbjct 120 EDRVVALYERIAAARGSEFGGRSAVLG---PEESDVVKRLYGLAARVPMGQADKYAVLSA 176
Query 191 PSAADRLVRLGDALDSVAAMVEFELS 216
P+ + RL L +A+D+V AMVEF+LS
Sbjct 177 PTVSARLSALSEAVDTVTAMVEFQLS 202
>gi|118468409|ref|YP_885243.1| ATP-dependent protease La [Mycobacterium smegmatis str. MC2 155]
gi|118169696|gb|ABK70592.1| ATP-dependent protease La (LON) domain subfamily protein [Mycobacterium
smegmatis str. MC2 155]
Length=208
Score = 227 bits (579), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 121/206 (59%), Positives = 148/206 (72%), Gaps = 4/206 (1%)
Query 11 MFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRCDVGT 70
MFPLE A LP E+LPL IFEPRY ALV DCM +P FGVVLIS GREVGGGD RCDVG
Sbjct 6 MFPLEVAMLPGEELPLRIFEPRYQALVSDCMAMPEPAFGVVLISAGREVGGGDKRCDVGA 65
Query 71 LARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQLLEV 130
LARI +C + G+ RY L C +GERIRV WL D PYPRA + WPD+PG PV +++ V
Sbjct 66 LARIIDCQNLGANRYRLACVLGERIRVLQWLDDAPYPRADIEPWPDEPGEPVEESEVAAV 125
Query 131 EDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMGPADRYAVLAT 190
E+R+VALF+ I A G +P+R++V + D RLYALA RVPMG ADRY+VL+
Sbjct 126 EERIVALFDLIGEASGKPVPSRDIVAAAGL----DPENRLYALAARVPMGQADRYSVLSA 181
Query 191 PSAADRLVRLGDALDSVAAMVEFELS 216
P+ A RL L +A+D+V AMVEF++S
Sbjct 182 PTEAARLAALSEAVDTVTAMVEFQIS 207
>gi|169631243|ref|YP_001704892.1| hypothetical protein MAB_4165 [Mycobacterium abscessus ATCC 19977]
gi|169243210|emb|CAM64238.1| Conserved hypothetical protein (peptidase?) [Mycobacterium abscessus]
Length=208
Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/208 (55%), Positives = 139/208 (67%), Gaps = 7/208 (3%)
Query 11 MFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRCDVGT 70
MFPL+S LP E LPL IFEPRY A++RD + AD FGVVLI+RGREVGGGD R DVGT
Sbjct 4 MFPLQSVLLPGEPLPLRIFEPRYVAMIRDVL-AADHTFGVVLIARGREVGGGDVRHDVGT 62
Query 71 LARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVT-AAQLLE 129
AR+ +C G+ R+ +RC RIR+ WL DDPYPRA+V WPD+P V + L E
Sbjct 63 AARVLDCESLGADRFAVRCEGAGRIRITRWLEDDPYPRAEVEPWPDEPDERVLPLSALNE 122
Query 130 VEDRVVALFERIAAARGVRLPAR-EVVLGYPVVDPADTGQRLYALACRVPMGPADRYAVL 188
V+ R+ L R+A AR VRLP R + G P+ +RLYALA RVPMG ADRYAVL
Sbjct 123 VQVRIENLLRRVATARQVRLPRRWSIATGL----PSGAEKRLYALASRVPMGQADRYAVL 178
Query 189 ATPSAADRLVRLGDALDSVAAMVEFELS 216
A P+ R+ L DA+D+V AM++F S
Sbjct 179 AAPTLEKRVSALNDAVDTVNAMLDFRES 206
>gi|111019345|ref|YP_702317.1| endopeptidase La [Rhodococcus jostii RHA1]
gi|110818875|gb|ABG94159.1| probable endopeptidase La [Rhodococcus jostii RHA1]
Length=212
Score = 187 bits (475), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 104/212 (50%), Positives = 129/212 (61%), Gaps = 9/212 (4%)
Query 9 LAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTAD-PRFGVVLISRGREVGGGDTRCD 67
L MFPL S LP + LPLH+FEPRY LVRDC+D D PRFGVVLI+RG EVGGGD R D
Sbjct 4 LPMFPLGSTMLPGQQLPLHVFEPRYQELVRDCLDAPDGPRFGVVLIARGNEVGGGDIRHD 63
Query 68 VGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTA--- 124
VGT+ARI A G GRY L CR ERI+V WLPD+PYP A+V WPD+ TA
Sbjct 64 VGTIARIESHASIGEGRYELFCRTEERIKVSKWLPDNPYPIAEVDVWPDENTGTQTADYE 123
Query 125 -AQLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMGPAD 183
L+E + + L R+A G P V+ G+ G RLY +A +PMG AD
Sbjct 124 FPSLIERLEFLYGLLRRLATETGNVPPDVPVIGGF----RGSLGTRLYEIATYIPMGDAD 179
Query 184 RYAVLATPSAADRLVRLGDALDSVAAMVEFEL 215
R +LA A +RL + +A+++ MV+F L
Sbjct 180 RLQILAAAGADERLREVSEAIENAIEMVQFRL 211
>gi|226361483|ref|YP_002779261.1| hypothetical protein ROP_20690 [Rhodococcus opacus B4]
gi|226239968|dbj|BAH50316.1| hypothetical protein [Rhodococcus opacus B4]
Length=212
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/212 (49%), Positives = 128/212 (61%), Gaps = 9/212 (4%)
Query 9 LAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTAD-PRFGVVLISRGREVGGGDTRCD 67
L MFPL S LP + LPLH+FEPRY LVRDC+ D PRFGVVLI+RG EVGGGD R D
Sbjct 4 LPMFPLGSTMLPGQQLPLHVFEPRYQELVRDCLAAPDGPRFGVVLIARGNEVGGGDVRHD 63
Query 68 VGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTA--- 124
VGT+ARI A G GRY L CR ERI+V WLPD+PYP A+V WPD+ TA
Sbjct 64 VGTIARIESHASIGDGRYELFCRTEERIKVSKWLPDNPYPIAEVDVWPDENTGTQTADYE 123
Query 125 -AQLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMGPAD 183
L+E + + L R+A G P V+ G+ G RLY +A +PMG AD
Sbjct 124 FPSLIERLEFLYGLLRRLATETGNVPPDVPVIGGF----RGSLGTRLYEVATYIPMGDAD 179
Query 184 RYAVLATPSAADRLVRLGDALDSVAAMVEFEL 215
R +LA A +RL + +A+++ MV+F L
Sbjct 180 RLQILAAAGADERLREVSEAIENAIEMVQFRL 211
>gi|229488716|ref|ZP_04382582.1| peptidase S16, lon domain protein [Rhodococcus erythropolis SK121]
gi|229324220|gb|EEN89975.1| peptidase S16, lon domain protein [Rhodococcus erythropolis SK121]
Length=212
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/210 (50%), Positives = 133/210 (64%), Gaps = 9/210 (4%)
Query 11 MFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTAD-PRFGVVLISRGREVGGGDTRCDVG 69
MFPL SA LP E LPL+IFEPRY ALV + ++ AD P FGVVLI+RG EVGGG++R DVG
Sbjct 6 MFPLGSALLPGEVLPLNIFEPRYRALVENVLEAADGPLFGVVLIARGHEVGGGESRHDVG 65
Query 70 TLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQ-PGHPVTAAQ-- 126
TLARI G+GRY L CR +RIRV WLPDDPYP A+V WPD+ G PVTA +
Sbjct 66 TLARIESHVAMGAGRYQLYCRTEDRIRVNRWLPDDPYPLAEVELWPDENNGTPVTAYEYD 125
Query 127 -LLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMGPADRY 185
LLE + + + ++A G + P + P G RLYALA +PMG ADR
Sbjct 126 SLLERIEFMYGMLGKLALRAGEQTPR----MPVPPDPLDPLGSRLYALARSIPMGDADRL 181
Query 186 AVLATPSAADRLVRLGDALDSVAAMVEFEL 215
A+L P A +R+ L +A+++ + +F L
Sbjct 182 AILTAPGADERIRTLSEAVENTIEVAQFNL 211
>gi|226308751|ref|YP_002768711.1| hypothetical protein RER_52640 [Rhodococcus erythropolis PR4]
gi|226187868|dbj|BAH35972.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=212
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/210 (50%), Positives = 132/210 (63%), Gaps = 9/210 (4%)
Query 11 MFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTAD-PRFGVVLISRGREVGGGDTRCDVG 69
MFPL SA LP E LPL+IFEPRY ALV + ++ AD P FGVVLI+RG EVGGG++R DVG
Sbjct 6 MFPLGSALLPGEVLPLNIFEPRYRALVENVLEAADGPLFGVVLIARGHEVGGGESRHDVG 65
Query 70 TLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQ-PGHPVTAAQ-- 126
TLARI G+GRY L CR RIRV WLPDDPYP A+V WPD+ G PVTA +
Sbjct 66 TLARIESHVAMGAGRYQLYCRTEGRIRVNRWLPDDPYPLAEVELWPDENNGTPVTAYEYD 125
Query 127 -LLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMGPADRY 185
LLE + + + ++A G + P + P G RLYALA +PMG ADR
Sbjct 126 SLLERIEFMYGMLGKLALRAGEQTPR----MPVPPDPLDPLGSRLYALARSIPMGDADRL 181
Query 186 AVLATPSAADRLVRLGDALDSVAAMVEFEL 215
A+L P A +R+ L +A+++ + +F L
Sbjct 182 AILTAPGADERIRTLSEAVENTIEVAQFNL 211
>gi|312141778|ref|YP_004009114.1| ATP-dependent serine peptidase [Rhodococcus equi 103S]
gi|311891117|emb|CBH50436.1| putative ATP-dependent serine peptidase [Rhodococcus equi 103S]
Length=214
Score = 174 bits (441), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 102/215 (48%), Positives = 125/215 (59%), Gaps = 14/215 (6%)
Query 9 LAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMD-TADPRFGVVLISRGREVGGGDTRCD 67
L MFPL +A LP E LPLH+FEPR+ ALVRDC+ T P FG VLI+RG EVGGGD R D
Sbjct 4 LPMFPLGAALLPGERLPLHVFEPRFQALVRDCLTATEGPVFGTVLIARGHEVGGGDVRND 63
Query 68 VGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQL 127
+GT RI G GRY L C ERIR+ WL DDPYPRA++ WP + V+ QL
Sbjct 64 IGTAVRIVSHVSIGDGRYALDCVGEERIRIVRWLGDDPYPRAEIEPWPVEASSRVSDDQL 123
Query 128 LEVEDRVVALFERIAAARGVRLPAREV------VLGYPVVDPADTGQRLYALACRVPMGP 181
+ D++ L+ + R +R VL P G LYALA VPMG
Sbjct 124 QHLTDKITELYILLTRIRELRDDPPPAPPRLFDVLERP-------GDHLYALASWVPMGA 176
Query 182 ADRYAVLATPSAADRLVRLGDALDSVAAMVEFELS 216
AD+YAVL+ +A DR L DA+D+ + EF LS
Sbjct 177 ADKYAVLSAQTADDRHRALTDAIDNAREIAEFRLS 211
>gi|325672964|ref|ZP_08152658.1| ATP-dependent protease La domain family protein [Rhodococcus
equi ATCC 33707]
gi|325556217|gb|EGD25885.1| ATP-dependent protease La domain family protein [Rhodococcus
equi ATCC 33707]
Length=214
Score = 174 bits (440), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 103/215 (48%), Positives = 125/215 (59%), Gaps = 14/215 (6%)
Query 9 LAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMD-TADPRFGVVLISRGREVGGGDTRCD 67
L MFPL +A LP E LPLH+FEPR+ ALVRDC+ T P FG VLI+RG EVGGGD R D
Sbjct 4 LPMFPLGAALLPGERLPLHVFEPRFQALVRDCLTATEGPVFGTVLIARGHEVGGGDVRND 63
Query 68 VGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQL 127
VGT RI G GRY L C ERIR+ WL DDPYPRA++ WP + V+ QL
Sbjct 64 VGTAVRIVSHVGIGDGRYALDCVGEERIRIVRWLGDDPYPRAEIEPWPVEASSRVSDDQL 123
Query 128 LEVEDRVVALFERIAAARGVRLPAREV------VLGYPVVDPADTGQRLYALACRVPMGP 181
+ D++ L+ + R +R VL P G LYALA VPMG
Sbjct 124 QHLTDKITELYILLTRIRELRDDPPPAPPRLFDVLERP-------GDHLYALASWVPMGA 176
Query 182 ADRYAVLATPSAADRLVRLGDALDSVAAMVEFELS 216
AD+YAVL+ +A DR L DA+D+ + EF LS
Sbjct 177 ADKYAVLSAQTADDRHRALTDAIDNAREIAEFRLS 211
>gi|333922114|ref|YP_004495695.1| ATP-dependent protease La domain family protein [Amycolicicoccus
subflavus DQS3-9A1]
gi|333484335|gb|AEF42895.1| ATP-dependent protease La domain family protein [Amycolicicoccus
subflavus DQS3-9A1]
Length=211
Score = 167 bits (424), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 99/212 (47%), Positives = 124/212 (59%), Gaps = 11/212 (5%)
Query 11 MFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTAD-PRFGVVLISRGREVGGGDTRCDVG 69
MFPL +A LP LPLH+FEPRY LVRDC+ + P FG VLI+RG EVGGGD R +VG
Sbjct 6 MFPLGTALLPGGRLPLHVFEPRYQELVRDCLAAPEGPFFGEVLIARGAEVGGGDLRNEVG 65
Query 70 TLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQLLE 129
T A I D G GR + CR ERIRV WLPDDPYP+A+V WPD+ + +
Sbjct 66 TRAEIVANVDLGGGRIAMDCRGRERIRVTRWLPDDPYPKAEVEPWPDE-DQTIGESDFHA 124
Query 130 VEDRVVALFERIAAARGVRLPAREVVLGYPVVD----PADTGQRLYALACRVPMGPADRY 185
R+ L+ +A RL ++ V V D P D LY+LA RVP+G ADRY
Sbjct 125 FSARIAELYSLLA-----RLAGKQHVPSPRVPDLGGLPEDPALHLYSLADRVPLGDADRY 179
Query 186 AVLATPSAADRLVRLGDALDSVAAMVEFELST 217
A+LA P + R+ DALD + + EF L+
Sbjct 180 ALLAAPGLSTRVTVFSDALDGLVELAEFGLTK 211
>gi|296140648|ref|YP_003647891.1| peptidase S16 [Tsukamurella paurometabola DSM 20162]
gi|296028782|gb|ADG79552.1| peptidase S16 lon domain protein [Tsukamurella paurometabola
DSM 20162]
Length=200
Score = 147 bits (372), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/207 (43%), Positives = 118/207 (58%), Gaps = 8/207 (3%)
Query 11 MFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRCDVGT 70
MFPL + LP E+LPL +FEPRY +V C+ T D RFGVVLI RG EVGGGD R DVGT
Sbjct 1 MFPLGAVLLPGEELPLRVFEPRYRRMVERCLAT-DGRFGVVLIERGSEVGGGDVRTDVGT 59
Query 71 LARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQLLEV 130
+A+I G + L C+ ERI V WLPDDP+P A+ WPD+ V LL+
Sbjct 60 IAQIDRYVRRTGGEFTLVCKGAERIAVQHWLPDDPFPLAEAAPWPDESQPAVDLIPLLDK 119
Query 131 EDRVVALFERIAAARGVRLPAREVVLGYPVVD-PADTGQRLYALACRVPMGPADRYAVLA 189
+ + L ++ RG + + +P + P +R Y LA +P+ DRY LA
Sbjct 120 RNEIERLSAQLTRRRGGKPRS------WPKLTLPEHPVERSYLLARALPLSDVDRYRALA 173
Query 190 TPSAADRLVRLGDALDSVAAMVEFELS 216
P ADR+ L DALD + A ++F+L
Sbjct 174 APGPADRVHVLTDALDDLIATLKFQLQ 200
>gi|326384932|ref|ZP_08206606.1| peptidase S16 lon domain protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326196322|gb|EGD53522.1| peptidase S16 lon domain protein [Gordonia neofelifaecis NRRL
B-59395]
Length=218
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/213 (41%), Positives = 116/213 (55%), Gaps = 9/213 (4%)
Query 8 ELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRCD 67
E+ MFPL + LP E LPL IFEPRYAA+V ++ D +FGVVLI RG EVGGGD R
Sbjct 10 EMPMFPLGAVLLPGEQLPLRIFEPRYAAMV-PVVEKDDGKFGVVLIERGSEVGGGDVRSM 68
Query 68 VGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQL 127
VGT+A+I +G GRY L C RIRV +WLPDDPYP A V P+ + ++L
Sbjct 69 VGTIAQIDRFTQSGPGRYSLLCNGVSRIRVLEWLPDDPYPHAIVEDLPEPEVGYLEWSEL 128
Query 128 LEVEDRVVALFERIAAARGVRLPA-REVVLGYPVVDPADTGQRLYA---LACRVPMGPAD 183
+E A + + G + P R + ++G + A A +P+GPAD
Sbjct 129 MEKR----AQLQLLCGQGGRQDPQLRWIASQLSTTVEYESGDQTTASFRAASDLPLGPAD 184
Query 184 RYAVLATPSAADRLVRLGDALDSVAAMVEFELS 216
R +VL P R+ + ALD + A + F L
Sbjct 185 RQSVLEAPDPGARIDVIDAALDDLIAALRFRLK 217
>gi|262200955|ref|YP_003272163.1| peptidase S16 lon domain-containing protein [Gordonia bronchialis
DSM 43247]
gi|262084302|gb|ACY20270.1| peptidase S16 lon domain protein [Gordonia bronchialis DSM 43247]
Length=206
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/205 (44%), Positives = 110/205 (54%), Gaps = 3/205 (1%)
Query 11 MFPLESAPLPDEDLPLHIFEPRYAALVRDCMD--TADPRFGVVLISRGREVGGGDTRCDV 68
MFPL +A LP E LPL IFEPRY A++ DC+D AD RFGVVLI+RG EVGGGD R DV
Sbjct 1 MFPLGTALLPGEPLPLRIFEPRYRAMLGDCLDGPDADARFGVVLIARGSEVGGGDVRHDV 60
Query 69 GTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQLL 128
GT A I GR + C R RV +WLPDDPYPRA+V+ D +L
Sbjct 61 GTFAAIDAVDRLPDGRATVVCSGTARFRVVEWLPDDPYPRARVQTLADLEFTDAAHTRLR 120
Query 129 EVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMGPADRYAVL 188
+ R+ L A AR V + + VD AD + LY +P GP DR +L
Sbjct 121 DQGARIRELVGDFARARDVDPAELQAIFDDSSVD-ADPVRTLYRWVASLPAGPLDRQRLL 179
Query 189 ATPSAADRLVRLGDALDSVAAMVEF 213
A L L +A + AA ++F
Sbjct 180 EAADADAALDALTEAAEGFAARMQF 204
>gi|343925909|ref|ZP_08765424.1| putative peptidase S16 family protein [Gordonia alkanivorans
NBRC 16433]
gi|343764260|dbj|GAA12350.1| putative peptidase S16 family protein [Gordonia alkanivorans
NBRC 16433]
Length=211
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/208 (35%), Positives = 105/208 (51%), Gaps = 5/208 (2%)
Query 11 MFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPR----FGVVLISRGREVGGGDTRC 66
MFPL +A LP +LPL +FEPRY +V D ++ +D R FGVVLI+RG EVGGG+ RC
Sbjct 1 MFPLGTALLPGGELPLRVFEPRYRQMVGDHIEESDGRSTVRFGVVLIARGSEVGGGEVRC 60
Query 67 DVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQ 126
+VGT+ GR +L R R+ +WLPDDPYP A++ + V +
Sbjct 61 EVGTMTLADVTDRFPDGRALLSGTGTHRFRIVEWLPDDPYPLARIEVLSEPAPSEVDLER 120
Query 127 LLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTG-QRLYALACRVPMGPADRY 185
L ++ R+ + + A G + L DPA +Y A R+ + P D+
Sbjct 121 LHSIDQRLRVIMRQTLEAAGKDVDTIFAALDIIDADPAMADISPIYRWANRLQVEPHDQQ 180
Query 186 AVLATPSAADRLVRLGDALDSVAAMVEF 213
+L + +L L D ++ + A F
Sbjct 181 RLLEAADPSGQLDVLDDVMEGLEARAAF 208
>gi|311742125|ref|ZP_07715935.1| ATP-dependent protease La domain family protein [Aeromicrobium
marinum DSM 15272]
gi|311314618|gb|EFQ84525.1| ATP-dependent protease La domain family protein [Aeromicrobium
marinum DSM 15272]
Length=234
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 104/200 (52%), Gaps = 20/200 (10%)
Query 6 PVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTR 65
P MFPL SA LP LPL +FEPRY A+++ M+ FGVVLI RG E GGG+TR
Sbjct 30 PSATPMFPLGSALLPGMPLPLRLFEPRYLAMLQVVMERQPTDFGVVLIERGTEAGGGETR 89
Query 66 CDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVR-----FWPDQPGH 120
DVGT+A I + A G ++L R R V WLPDDPYP+A++ W D+
Sbjct 90 FDVGTMATIEQIAPDGE-TFVLIARGTTRFTVDRWLPDDPYPQAEISELAPLEWSDE--- 145
Query 121 PVTAAQLLEVEDRVVALFERIAAARGVRLP-AREVVLGYPVVDPADTGQRLYALACRVPM 179
A+ L+ ED V R AA V LP + ++VL DP +R + LA +
Sbjct 146 --LASALIVAEDAVRTHLAR--AAEFVELPWSADIVLDD---DPV---ERSWQLAGIALL 195
Query 180 GPADRYAVLATPSAADRLVR 199
G D L + S + L R
Sbjct 196 GELDHVEALRSTSVGELLDR 215
>gi|323356515|ref|YP_004222911.1| hypothetical protein MTES_0067 [Microbacterium testaceum StLB037]
gi|323272886|dbj|BAJ73031.1| uncharacterized protein, similar to the N-terminal domain of
Lon protease [Microbacterium testaceum StLB037]
Length=217
Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/193 (37%), Positives = 93/193 (49%), Gaps = 18/193 (9%)
Query 10 AMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRCDVG 69
AMFPL + P L L IFE RY ++ +D + P FGVVLI RG E GGGD R +G
Sbjct 4 AMFPLGAVLFPHTPLALRIFEERYLVMLGRLLDESAPAFGVVLIERGTETGGGDQRFAIG 63
Query 70 TLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQLLE 129
T+AR++ + + R ER + WL DDPYPRA VR PD + A L E
Sbjct 64 TMARLSHVLPEAD-QLQIVARGTERFEIVTWLDDDPYPRADVRALPDLEWNEALAPVLEE 122
Query 130 VEDRVVALFERIAAARGVRLPAREVVLGYPVVDP-----ADTGQRLYALACRVPMGPADR 184
E R+V R+ R V G DP D +R + LA P+G D+
Sbjct 123 AE-RIVR-----------RVLGRAVQFGGSRWDPEVELSEDPLERAWQLAAIAPLGELDQ 170
Query 185 YAVLATPSAADRL 197
+L + +A L
Sbjct 171 IELLRSETAGGLL 183
>gi|163846826|ref|YP_001634870.1| peptidase S16 lon domain-containing protein [Chloroflexus aurantiacus
J-10-fl]
gi|222524648|ref|YP_002569119.1| peptidase S16 lon domain-containing protein [Chloroflexus sp.
Y-400-fl]
gi|163668115|gb|ABY34481.1| peptidase S16 lon domain protein [Chloroflexus aurantiacus J-10-fl]
gi|222448527|gb|ACM52793.1| peptidase S16 lon domain protein [Chloroflexus sp. Y-400-fl]
Length=222
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/209 (34%), Positives = 97/209 (47%), Gaps = 17/209 (8%)
Query 9 LAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTR--- 65
L +FPL S P + LHIFE RY ++ C+ + RFG+VL+ RG EV G
Sbjct 5 LPLFPLGSLLFPGGTMSLHIFEQRYRLMIGHCL-AGEQRFGIVLLRRGHEVIEGRVVDVA 63
Query 66 ---CDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPV 122
DVGT+A I E GRY+L +R R+ + PY AKV+ P+Q +
Sbjct 64 PEPYDVGTVAIIQEYLKLEDGRYLLHVMGQQRFRILQIIDQSPYLVAKVQLLPEQTDNES 123
Query 123 TAAQLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMGPA 182
AA E+ + +ERIA G + + L DP G Y LA R+ + A
Sbjct 124 IAAA-TELRNTYQRYWERIATITGTEIEVESLPL-----DPIKLG---YILADRLQIDMA 174
Query 183 DRYAVLATPSAADRLVRLGDALDSVAAMV 211
+ L T DRL L AL + A++
Sbjct 175 QKQRWLET-DVTDRLRSLTMALRTEMAIL 202
>gi|159900220|ref|YP_001546467.1| peptidase S16 lon domain-containing protein [Herpetosiphon aurantiacus
DSM 785]
gi|159893259|gb|ABX06339.1| peptidase S16 lon domain protein [Herpetosiphon aurantiacus DSM
785]
Length=213
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/163 (37%), Positives = 75/163 (47%), Gaps = 17/163 (10%)
Query 9 LAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRCDV 68
L +FPL P LPLHIFEPRY ++ C++ + P FGVVLI G EVGG V
Sbjct 4 LPLFPLNVVLFPGAQLPLHIFEPRYRTMISRCLEESKP-FGVVLIREGVEVGGSAVPHMV 62
Query 69 GTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQLL 128
GT A I GR + +R R+ L DPY A V D A
Sbjct 63 GTTADIQSAYRLADGRMYIVTEGRQRFRINYPLSVDPYMVAMVTMLDDDVNDRHQA---- 118
Query 129 EVEDRVVALFER----IAAARGVR-----LPAREVVLGYPVVD 162
D + AL+ + +AAA G+R LP+ V L Y + D
Sbjct 119 ---DELTALYSQYHRTVAAATGMRSNAIDLPSEPVSLSYKLAD 158
>gi|269926519|ref|YP_003323142.1| peptidase S16 lon domain protein [Thermobaculum terrenum ATCC
BAA-798]
gi|269790179|gb|ACZ42320.1| peptidase S16 lon domain protein [Thermobaculum terrenum ATCC
BAA-798]
Length=213
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/136 (34%), Positives = 70/136 (52%), Gaps = 1/136 (0%)
Query 11 MFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRCDVGT 70
+FPL + P LPLHIFE RY ++ C+ D FGVV I +G+EVGG ++GT
Sbjct 10 LFPLHTVLFPGMLLPLHIFEERYKIMISRCL-AHDGMFGVVKIRKGKEVGGPAEPEEIGT 68
Query 71 LARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQLLEV 130
+ARI GR L ER R+ + D+PY +A++ F D+ + L E
Sbjct 69 MARIVSAGKYPDGRMDLLTVGKERFRILRLIDDEPYLQAEIEFLRDEEEDEHEVSILAEE 128
Query 131 EDRVVALFERIAAARG 146
+++ + + A +G
Sbjct 129 VRDLISDYRKKAGIKG 144
>gi|219849203|ref|YP_002463636.1| peptidase S16 lon domain-containing protein [Chloroflexus aggregans
DSM 9485]
gi|219543462|gb|ACL25200.1| peptidase S16 lon domain protein [Chloroflexus aggregans DSM
9485]
Length=222
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/210 (31%), Positives = 95/210 (46%), Gaps = 19/210 (9%)
Query 9 LAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRC-- 66
L +FPL + P L LHIFE RY ++ C+ T P FG+VL+ RG EV G
Sbjct 5 LPLFPLGTLLFPGSLLSLHIFEERYRLMIGRCLATQQP-FGIVLLRRGHEVIEGRRMAIA 63
Query 67 ----DVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQ-PGHP 121
DVGT+A I E GRY+L+ +R R+ + PY A+V+ D G
Sbjct 64 PEPYDVGTVAVIQEHLRLEDGRYLLQVIGQQRFRIVQIVEQTPYLVAQVKLLSDHVDGQT 123
Query 122 VTAAQLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMGP 181
+ AA E+ +ER+A G + + P + + Y LA R+ + P
Sbjct 124 LAAAN--ELRTTYQRYWERVATITGAEIDVEPL--------PLEPVKLSYLLADRLQIDP 173
Query 182 ADRYAVLATPSAADRLVRLGDALDSVAAMV 211
+ L + +RL L AL + A++
Sbjct 174 VQKQRWLEA-NVTERLRSLNKALRTELAIL 202
>gi|317123247|ref|YP_004097359.1| peptidase S16 [Intrasporangium calvum DSM 43043]
gi|315587335|gb|ADU46632.1| peptidase S16 lon domain protein [Intrasporangium calvum DSM
43043]
Length=227
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/204 (37%), Positives = 94/204 (47%), Gaps = 19/204 (9%)
Query 9 LAMFPLESAPLPDEDLPLHIFEPRYAALVRDCM---DTADPRFGVVLISRGREVGGGDTR 65
L +FPL + LP LPL +FEPRY AL+RD + D P FG++ I G EVG G R
Sbjct 4 LPLFPLGAVLLPGARLPLQVFEPRYVALLRDLIAAQDEHSPVFGIIAIREGNEVGEGAVR 63
Query 66 C--DVGTLARITECADAGSGRYMLRCRVGERIRV--CDWLPDDPYPRAKVRFWPDQP-GH 120
DVG A +T A G R+ + +R R+ D Y A+V W D+P G
Sbjct 64 SLYDVGCGALLTHVAALGGQRFFVIVEGTDRFRLGTVDRTAGTRYTTAQVS-WLDEPDGD 122
Query 121 PVTAAQL---LEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRV 177
P A L L E R+A R A EVV+ P V A YA+ V
Sbjct 123 PAAIAPLAGRLRAELEAFRELARVAQQRAGDPGAGEVVI--PQVPRALA----YAVPLIV 176
Query 178 PMGPADRYAVLATPSAADRLVRLG 201
+ ADR +L P RL RLG
Sbjct 177 SLDLADRQRLLECPDTESRL-RLG 199
>gi|152981631|ref|YP_001354811.1| hypothetical protein mma_3121 [Janthinobacterium sp. Marseille]
gi|151281708|gb|ABR90118.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length=208
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/106 (40%), Positives = 57/106 (54%), Gaps = 2/106 (1%)
Query 9 LAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRCDV 68
L +FPL + P LPL +FE RY +VRDCM P FGVVLI G+E+G DV
Sbjct 8 LPLFPLNTVLFPGGILPLKVFETRYIDMVRDCMKREMP-FGVVLIKSGQEIGNAAEPEDV 66
Query 69 GTLARITECADAGSGRYMLRCRVGERIRVCDW-LPDDPYPRAKVRF 113
G +A IT+ G +LR G R R+ + + D + A+V+
Sbjct 67 GCMAHITDWDAPQLGVLLLRTEGGTRFRILETRVHKDQHLEARVQI 112
>gi|345303598|ref|YP_004825500.1| peptidase S16 lon domain-containing protein [Rhodothermus marinus
SG0.5JP17-172]
gi|345112831|gb|AEN73663.1| peptidase S16 lon domain protein [Rhodothermus marinus SG0.5JP17-172]
Length=213
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/104 (43%), Positives = 54/104 (52%), Gaps = 9/104 (8%)
Query 9 LAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRCDV 68
L +FPLE P E LPLHIFEPRY LV C++ P FG+VL G+ V
Sbjct 6 LPLFPLEVVLYPGEQLPLHIFEPRYRRLVTRCLEDDQP-FGIVLAEAGK-------LAQV 57
Query 69 GTLARITEC-ADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKV 111
G+LARIT A G GR + +R R+ D+PY A V
Sbjct 58 GSLARITRVLARYGDGRMDILVTGEDRFRIVQLYSDEPYLTADV 101
>gi|340785812|ref|YP_004751277.1| hypothetical protein CFU_0618 [Collimonas fungivorans Ter331]
gi|340551079|gb|AEK60454.1| hypothetical protein CFU_0618 [Collimonas fungivorans Ter331]
Length=208
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/87 (44%), Positives = 47/87 (55%), Gaps = 1/87 (1%)
Query 11 MFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRCDVGT 70
+FPL + P LPL +FE RY ++R+CM T P FGVVLI G+EVG VG
Sbjct 10 LFPLNAVLFPGGVLPLKVFETRYLDMLRECMRTEQP-FGVVLIKSGKEVGNAAEPESVGC 68
Query 71 LARITECADAGSGRYMLRCRVGERIRV 97
L RI E G MLR +R R+
Sbjct 69 LTRIIEWDMQDLGVMMLRTEGSQRFRI 95
>gi|157273497|gb|ABV27396.1| ATP-dependent protease La domain protein [Candidatus Chloracidobacterium
thermophilum]
Length=231
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/180 (34%), Positives = 83/180 (47%), Gaps = 10/180 (5%)
Query 9 LAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRCDV 68
+ +FPL A P LPLHIFE RY A+VRDC+ + FGV I RGRE G V
Sbjct 14 IPIFPLPVALFPGMMLPLHIFEERYKAMVRDCL-AGEKIFGVTFI-RGRE-GFPPPVGRV 70
Query 69 GTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPGHPVTAAQLL 128
G A I GR + R ++ + PY A V F+ DQP + L
Sbjct 71 GCAAFILVMVPLEEGRMNILTTGLTRYHALEYFEEKPYLEAMVTFFDDQPVY----EDLT 126
Query 129 EVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMGPADRYAVL 188
EV + V A F+R A + +R +RE +P P D + +A + M + A++
Sbjct 127 EVTESVRATFKR--AVKAIRAMSREED-NFPDELPEDPRALSFLVASLLQMSEEQKMALM 183
>gi|269127111|ref|YP_003300481.1| peptidase S16 lon domain-containing protein [Thermomonospora
curvata DSM 43183]
gi|268312069|gb|ACY98443.1| peptidase S16 lon domain protein [Thermomonospora curvata DSM
43183]
Length=220
Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/215 (34%), Positives = 95/215 (45%), Gaps = 24/215 (11%)
Query 9 LAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADP-RFGVVLISRGREVGGGDTR-- 65
L +FPL + P LPLHIFE RY L+R+ ++ P RFGVV I G EVG G R
Sbjct 5 LPLFPLGTVLFPGLVLPLHIFEERYRLLIRELLEEPRPRRFGVVGIELGHEVGDGAARRL 64
Query 66 CDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQPG-HPVTA 124
VG A I GR+ + GER R+ PY +V F P++ G P A
Sbjct 65 APVGCTAEIRVVNPHDDGRFDVVTVGGERFRLLQVDDSRPYLSGEVEFLPEEAGTEPDAA 124
Query 125 AQLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTGQRLYALACRVPMGPADR 184
A + R+ L A A PA G PV P D + Y +A + + D+
Sbjct 125 AGRVGRLFRLYRLRLEAAGA-----PA-----GDPVELPDDPVRLSYLIAGAMVLDQRDK 174
Query 185 YAVLATPSAADRL----------VRLGDALDSVAA 209
+L A RL +RL DAL +V A
Sbjct 175 QRLLEAADATQRLWAEHELLRREIRLLDALPTVPA 209
>gi|300692623|ref|YP_003753618.1| peptidase, S16 family [Ralstonia solanacearum PSI07]
gi|299079683|emb|CBJ52360.1| putative peptidase, S16 family [Ralstonia solanacearum PSI07]
gi|344168278|emb|CCA80551.1| putative peptidase, S16 family [blood disease bacterium R229]
Length=216
Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/93 (44%), Positives = 51/93 (55%), Gaps = 4/93 (4%)
Query 8 ELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRC- 66
EL++FPL + P LPL IFE RY +VR C+ P FGV LI RG EV DT
Sbjct 19 ELSLFPLHTVLFPGGLLPLRIFEARYIDMVRTCLRDQTP-FGVCLIERGNEVATPDTPTV 77
Query 67 --DVGTLARITECADAGSGRYMLRCRVGERIRV 97
D+G +A I EC G M++ R +R +V
Sbjct 78 PVDIGCIAHIVECDMEQLGLLMIKVRGTQRFKV 110
>gi|344173554|emb|CCA88721.1| putative peptidase, S16 family [Ralstonia syzygii R24]
Length=216
Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/93 (44%), Positives = 51/93 (55%), Gaps = 4/93 (4%)
Query 8 ELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRC- 66
EL++FPL + P LPL IFE RY +VR C+ P FGV LI RG EV DT
Sbjct 19 ELSLFPLHTVLFPGGLLPLRIFEARYIDMVRTCLRDQTP-FGVCLIERGNEVATPDTPTV 77
Query 67 --DVGTLARITECADAGSGRYMLRCRVGERIRV 97
D+G +A I EC G M++ R +R +V
Sbjct 78 PVDIGCIAHIVECDMEQLGLLMIKVRGTQRFKV 110
>gi|298245103|ref|ZP_06968909.1| peptidase S16 lon domain protein [Ktedonobacter racemifer DSM
44963]
gi|297552584|gb|EFH86449.1| peptidase S16 lon domain protein [Ktedonobacter racemifer DSM
44963]
Length=217
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/112 (35%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Query 7 VELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRC 66
+EL +FPL+ P +PLHIFEPRY +++DC T P FG+VL ++ V +
Sbjct 6 IELPLFPLDVVLFPGTVMPLHIFEPRYRQMIQDCQRTQKP-FGIVL-TKPESVYLHEVPY 63
Query 67 DVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQP 118
VGT+ ++ GR+ L R R+ D PY A V + D P
Sbjct 64 SVGTMVQMRNVERTEDGRFTLMAIGTRRFRIVSQHRDRPYLSATVEPFMDDP 115
>gi|304394429|ref|ZP_07376352.1| ATP-dependent protease La protein [Ahrensia sp. R2A130]
gi|303293869|gb|EFL88246.1| ATP-dependent protease La protein [Ahrensia sp. R2A130]
Length=226
Score = 68.2 bits (165), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/209 (29%), Positives = 98/209 (47%), Gaps = 30/209 (14%)
Query 1 MADFAPVELAMFPLESAPL-PDEDLPLHIFEPRYAALVRDC------MDTADPRFGVVLI 53
+AD P LA+FPL A L P ++PL+IFEPRY +++ D + PRF +
Sbjct 11 LADL-PTSLALFPLTGALLLPAGNMPLNIFEPRYLSMLEDAIAGHRIIGMVQPRFD---L 66
Query 54 SRGREVGGGDTRCDVGTLARITECADAGSGRYML------RCRVGERIRVCDWLPDDPYP 107
+ G + C+VG + RIT ++G GR M+ R R+ E ++ + Y
Sbjct 67 ADGEQSEDHPQLCEVGCMGRITAHQESGDGRVMINLSGVARFRIREETKLVNG-----YR 121
Query 108 RAKVRFWPDQPGHPVTAAQLLEVEDRVVALFERIAAARGVRLPAREVVLGYPVVDPADTG 167
AKV + D AA+ ++ D ++ F++ L A ++ + V A+T
Sbjct 122 TAKVAGFADDLSEDPEAAKAVD-RDGLLRTFKQF-------LEANDMEADWDGVREANTE 173
Query 168 QRLYALACRVPMGPADRYAVLATPSAADR 196
+ L+ P GPA++ A+L P R
Sbjct 174 TLVNTLSMMSPYGPAEKQALLEAPDLKTR 202
>gi|268317346|ref|YP_003291065.1| peptidase S16 lon domain-containing protein [Rhodothermus marinus
DSM 4252]
gi|262334880|gb|ACY48677.1| peptidase S16 lon domain protein [Rhodothermus marinus DSM 4252]
Length=213
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/104 (42%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query 9 LAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREVGGGDTRCDV 68
L +FPLE P E LPLHIFEPRY LV C++ P FG+VL V
Sbjct 6 LPLFPLEVVLYPGEQLPLHIFEPRYRRLVTRCLEEDRP-FGIVL-------AEASKLAQV 57
Query 69 GTLARITEC-ADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKV 111
G+LARIT A G GR + +R R+ D+PY A V
Sbjct 58 GSLARITRVLARYGDGRMDILVTGEDRFRIVQLYSDEPYLTADV 101
Lambda K H
0.324 0.141 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 263865364408
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40