BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 21,062,489 sequences; 7,218,481,314 total letters Query= Rv0442c Rv0442c PPE family protein PPE10 530751:532214 reverse MW:47215 Length=487 Score E Sequences producing significant alignments: (Bits) Value gi|15839830|ref|NP_334867.1| PPE family protein [Mycobacterium t... 923 0.0 gi|289748926|ref|ZP_06508304.1| PPE family protein [Mycobacteriu... 922 0.0 gi|57116731|ref|YP_177726.1| PPE family protein [Mycobacterium t... 922 0.0 gi|254549389|ref|ZP_05139836.1| PPE family protein [Mycobacteriu... 921 0.0 gi|289573027|ref|ZP_06453254.1| PPE family protein [Mycobacteriu... 917 0.0 gi|340625467|ref|YP_004743919.1| PPE family protein [Mycobacteri... 914 0.0 gi|31791620|ref|NP_854113.1| PPE family protein [Mycobacterium b... 905 0.0 gi|121636356|ref|YP_976579.1| PPE family protein [Mycobacterium ... 904 0.0 gi|298523919|ref|ZP_07011328.1| ppe family protein [Mycobacteriu... 887 0.0 gi|379026568|dbj|BAL64301.1| PPE family protein [Mycobacterium t... 767 0.0 gi|1196513|gb|AAA88235.1| unknown protein [Mycobacterium tubercu... 765 0.0 gi|289568358|ref|ZP_06448585.1| PPE family protein [Mycobacteriu... 761 0.0 gi|306783076|ref|ZP_07421398.1| PPE family protein [Mycobacteriu... 751 0.0 gi|308376395|ref|ZP_07438707.2| PPE family protein [Mycobacteriu... 733 0.0 gi|289756515|ref|ZP_06515893.1| predicted protein [Mycobacterium... 590 3e-166 gi|306774538|ref|ZP_07412875.1| putative PPE family protein [Myc... 582 5e-164 gi|408781153|ref|ZP_11192926.1| PPE family protein [Mycobacteriu... 431 2e-118 gi|118617077|ref|YP_905409.1| PPE family protein [Mycobacterium ... 401 2e-109 gi|183980785|ref|YP_001849076.1| PPE family protein [Mycobacteri... 400 3e-109 gi|383770|prf||1904209A ORF in repetitive DNA 395 1e-107 gi|13186194|gb|AAB23767.2| putative host cell receptor binding p... 394 3e-107 gi|385993539|ref|YP_005911837.1| hypothetical protein [Mycobacte... 385 2e-104 gi|340625774|ref|YP_004744226.1| PPE family protein [Mycobacteri... 343 5e-92 gi|31791942|ref|NP_854435.1| PPE family protein [Mycobacterium b... 298 1e-78 gi|57116777|ref|YP_177753.1| PPE family protein [Mycobacterium t... 298 2e-78 gi|15840169|ref|NP_335206.1| PPE family protein [Mycobacterium t... 298 2e-78 gi|289568706|ref|ZP_06448933.1| PPE family protein [Mycobacteriu... 293 8e-77 gi|340626927|ref|YP_004745379.1| ppe family protein [Mycobacteri... 290 7e-76 gi|15843145|ref|NP_338182.1| PPE family protein [Mycobacterium t... 288 2e-75 gi|289440962|ref|ZP_06430706.1| PPE family protein [Mycobacteriu... 288 2e-75 gi|379029917|dbj|BAL67650.1| PPE family protein [Mycobacterium t... 287 5e-75 gi|340628497|ref|YP_004746949.1| PPE family protein [Mycobacteri... 286 9e-75 gi|183981653|ref|YP_001849944.1| PPE family protein [Mycobacteri... 285 2e-74 gi|289442157|ref|ZP_06431901.1| predicted protein [Mycobacterium... 283 4e-74 gi|408783278|ref|ZP_11195051.1| PPE family protein, partial [Myc... 283 7e-74 gi|408783409|ref|ZP_11195182.1| PPE family protein, partial [Myc... 277 4e-72 gi|408784271|ref|ZP_11196044.1| PPE family protein [Mycobacteriu... 275 3e-71 gi|31793109|ref|NP_855602.1| PPE family protein [Mycobacterium b... 271 4e-70 gi|121637822|ref|YP_978045.1| PPE family protein [Mycobacterium ... 270 4e-70 gi|339631970|ref|YP_004723612.1| PPE family protein [Mycobacteri... 270 4e-70 gi|385991283|ref|YP_005909581.1| PPE family protein [Mycobacteri... 270 5e-70 gi|289574600|ref|ZP_06454827.1| PPE family protein [Mycobacteriu... 270 5e-70 gi|289443397|ref|ZP_06433141.1| PPE family protein [Mycobacteriu... 270 6e-70 gi|289750499|ref|ZP_06509877.1| PPE family protein [Mycobacteriu... 270 6e-70 gi|289745649|ref|ZP_06505027.1| predicted protein [Mycobacterium... 269 9e-70 gi|313658804|ref|ZP_07815684.1| PPE family protein [Mycobacteriu... 269 1e-69 gi|308402956|ref|ZP_07493652.2| putative PPE family protein [Myc... 269 1e-69 gi|253799036|ref|YP_003032037.1| PPE family protein [Mycobacteri... 269 1e-69 gi|15841389|ref|NP_336426.1| PPE family protein [Mycobacterium t... 269 1e-69 gi|392386573|ref|YP_005308202.1| PPE34 [Mycobacterium tuberculos... 269 1e-69 >gi|15839830|ref|NP_334867.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|148660207|ref|YP_001281730.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|148821638|ref|YP_001286392.1| PPE family protein [Mycobacterium tuberculosis F11] 54 more sequence titles Length=487 Score = 923 bits (2386), Expect = 0.0, Method: Compositional matrix adjust. Identities = 486/487 (99%), Positives = 487/487 (100%), Gaps = 0/487 (0%) Query 1 VTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 +TSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW Sbjct 1 MTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 Query 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM Sbjct 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 Query 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI Sbjct 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 Query 181 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI 240 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI Sbjct 181 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI 240 Query 241 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL 300 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL Sbjct 241 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL 300 Query 301 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL 360 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL Sbjct 301 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL 360 Query 361 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG 420 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG Sbjct 361 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG 420 Query 421 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI 480 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI Sbjct 421 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI 480 Query 481 GQPVGSE 487 GQPVGSE Sbjct 481 GQPVGSE 487 >gi|289748926|ref|ZP_06508304.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289689513|gb|EFD56942.1| PPE family protein [Mycobacterium tuberculosis T92] Length=487 Score = 922 bits (2383), Expect = 0.0, Method: Compositional matrix adjust. Identities = 485/487 (99%), Positives = 487/487 (100%), Gaps = 0/487 (0%) Query 1 VTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 +TSPHFAWLPP+INSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW Sbjct 1 MTSPHFAWLPPDINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 Query 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM Sbjct 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 Query 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI Sbjct 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 Query 181 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI 240 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI Sbjct 181 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI 240 Query 241 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL 300 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL Sbjct 241 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL 300 Query 301 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL 360 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL Sbjct 301 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL 360 Query 361 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG 420 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG Sbjct 361 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG 420 Query 421 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI 480 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI Sbjct 421 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI 480 Query 481 GQPVGSE 487 GQPVGSE Sbjct 481 GQPVGSE 487 >gi|57116731|ref|YP_177726.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|38490182|emb|CAE55281.1| PPE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] Length=487 Score = 922 bits (2383), Expect = 0.0, Method: Compositional matrix adjust. Identities = 485/487 (99%), Positives = 487/487 (100%), Gaps = 0/487 (0%) Query 1 VTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 +TSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAE+LLASIASLGSVTSELTSGAW Sbjct 1 MTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEKLLASIASLGSVTSELTSGAW 60 Query 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM Sbjct 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 Query 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI Sbjct 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 Query 181 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI 240 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI Sbjct 181 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI 240 Query 241 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL 300 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL Sbjct 241 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL 300 Query 301 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL 360 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL Sbjct 301 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL 360 Query 361 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG 420 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG Sbjct 361 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG 420 Query 421 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI 480 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI Sbjct 421 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI 480 Query 481 GQPVGSE 487 GQPVGSE Sbjct 481 GQPVGSE 487 >gi|254549389|ref|ZP_05139836.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=487 Score = 921 bits (2381), Expect = 0.0, Method: Compositional matrix adjust. Identities = 485/487 (99%), Positives = 486/487 (99%), Gaps = 0/487 (0%) Query 1 VTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 +TSPHFAWLPPEINSA MFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW Sbjct 1 MTSPHFAWLPPEINSARMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 Query 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM Sbjct 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 Query 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI Sbjct 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 Query 181 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI 240 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI Sbjct 181 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI 240 Query 241 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL 300 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL Sbjct 241 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL 300 Query 301 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL 360 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL Sbjct 301 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL 360 Query 361 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG 420 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG Sbjct 361 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG 420 Query 421 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI 480 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI Sbjct 421 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI 480 Query 481 GQPVGSE 487 GQPVGSE Sbjct 481 GQPVGSE 487 >gi|289573027|ref|ZP_06453254.1| PPE family protein [Mycobacterium tuberculosis K85] gi|289537458|gb|EFD42036.1| PPE family protein [Mycobacterium tuberculosis K85] Length=487 Score = 917 bits (2371), Expect = 0.0, Method: Compositional matrix adjust. Identities = 484/487 (99%), Positives = 485/487 (99%), Gaps = 0/487 (0%) Query 1 VTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 +TSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW Sbjct 1 MTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 Query 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM Sbjct 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 Query 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI Sbjct 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 Query 181 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI 240 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI Sbjct 181 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI 240 Query 241 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL 300 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNS SGNIGIGNSGSL Sbjct 241 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSASGNIGIGNSGSL 300 Query 301 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL 360 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL Sbjct 301 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL 360 Query 361 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG 420 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG Sbjct 361 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG 420 Query 421 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI 480 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFY SPDRESAYASPRI Sbjct 421 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYLSPDRESAYASPRI 480 Query 481 GQPVGSE 487 GQPVGSE Sbjct 481 GQPVGSE 487 >gi|340625467|ref|YP_004743919.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340003657|emb|CCC42780.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=487 Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust. Identities = 481/487 (99%), Positives = 484/487 (99%), Gaps = 0/487 (0%) Query 1 VTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 +TSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSEL GAW Sbjct 1 MTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELAGGAW 60 Query 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM Sbjct 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 Query 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI Sbjct 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 Query 181 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI 240 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTG+GNIGSGNTGSGNLGLGNLGDGNI Sbjct 181 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGSGNIGSGNTGSGNLGLGNLGDGNI 240 Query 241 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL 300 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL Sbjct 241 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL 300 Query 301 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL 360 NSGIGTSGTINAGLGSAGSLNT+FWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL Sbjct 301 NSGIGTSGTINAGLGSAGSLNTNFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL 360 Query 361 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG 420 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG Sbjct 361 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG 420 Query 421 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI 480 ANPGLRS GTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI Sbjct 421 ANPGLRSSGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI 480 Query 481 GQPVGSE 487 GQPVGSE Sbjct 481 GQPVGSE 487 >gi|31791620|ref|NP_854113.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|31617206|emb|CAD93313.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=479 Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust. Identities = 478/479 (99%), Positives = 479/479 (100%), Gaps = 0/479 (0%) Query 9 LPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPSAAAM 68 +PPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPSAAAM Sbjct 1 MPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPSAAAM 60 Query 69 MAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLAATNW 128 MAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLAATNW Sbjct 61 MAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLAATNW 120 Query 129 FGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGKNGQI 188 FGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGKNGQI Sbjct 121 FGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGKNGQI 180 Query 189 NLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNIGFGNTGSG 248 NLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNIGFGNTGSG Sbjct 181 NLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNIGFGNTGSG 240 Query 249 NIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSG 308 NIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSG Sbjct 241 NIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSG 300 Query 309 TINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILASA 368 TINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILASA Sbjct 301 TINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILASA 360 Query 369 LGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGLRSP 428 LGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGLRSP Sbjct 361 LGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGLRSP 420 Query 429 GTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRIGQPVGSE 487 GTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRIGQPVGSE Sbjct 421 GTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRIGQPVGSE 479 >gi|121636356|ref|YP_976579.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988828|ref|YP_002643515.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|378770190|ref|YP_005169923.1| PPE family protein [Mycobacterium bovis BCG str. Mexico] gi|121492003|emb|CAL70466.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224771941|dbj|BAH24747.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341600372|emb|CCC63042.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ] gi|356592511|gb|AET17740.1| PPE family protein [Mycobacterium bovis BCG str. Mexico] Length=479 Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust. Identities = 477/479 (99%), Positives = 479/479 (100%), Gaps = 0/479 (0%) Query 9 LPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPSAAAM 68 +PPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPSAAAM Sbjct 1 MPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPSAAAM 60 Query 69 MAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLAATNW 128 MAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLAATNW Sbjct 61 MAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLAATNW 120 Query 129 FGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGKNGQI 188 FGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGKNGQI Sbjct 121 FGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGKNGQI 180 Query 189 NLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNIGFGNTGSG 248 NLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIG+GNTGSGNLGLGNLGDGNIGFGNTGSG Sbjct 181 NLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGTGNTGSGNLGLGNLGDGNIGFGNTGSG 240 Query 249 NIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSG 308 NIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSG Sbjct 241 NIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSG 300 Query 309 TINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILASA 368 TINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILASA Sbjct 301 TINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILASA 360 Query 369 LGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGLRSP 428 LGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGLRSP Sbjct 361 LGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGLRSP 420 Query 429 GTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRIGQPVGSE 487 GTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRIGQPVGSE Sbjct 421 GTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRIGQPVGSE 479 >gi|298523919|ref|ZP_07011328.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A] gi|298493713|gb|EFI29007.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A] Length=470 Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust. Identities = 470/470 (100%), Positives = 470/470 (100%), Gaps = 0/470 (0%) Query 18 MFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPSAAAMMAVATQYLA 77 MFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPSAAAMMAVATQYLA Sbjct 1 MFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPSAAAMMAVATQYLA 60 Query 78 WLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLAATNWFGQNAPALM 137 WLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLAATNWFGQNAPALM Sbjct 61 WLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLAATNWFGQNAPALM 120 Query 138 DVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGKNGQINLGFGNTGS 197 DVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGKNGQINLGFGNTGS Sbjct 121 DVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGKNGQINLGFGNTGS 180 Query 198 GNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNIGFGNTGSGNIGFGITGD 257 GNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNIGFGNTGSGNIGFGITGD Sbjct 181 GNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNIGFGNTGSGNIGFGITGD 240 Query 258 HQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSA 317 HQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSA Sbjct 241 HQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSA 300 Query 318 GSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILASALGSTGGLQH 377 GSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILASALGSTGGLQH Sbjct 301 GSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILASALGSTGGLQH 360 Query 378 GLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGLRSPGTSYPSFVN 437 GLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGLRSPGTSYPSFVN Sbjct 361 GLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGLRSPGTSYPSFVN 420 Query 438 SGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRIGQPVGSE 487 SGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRIGQPVGSE Sbjct 421 SGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRIGQPVGSE 470 >gi|379026568|dbj|BAL64301.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC 35801] Length=492 Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust. Identities = 483/492 (99%), Positives = 485/492 (99%), Gaps = 5/492 (1%) Query 1 VTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 +TSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW Sbjct 1 MTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 Query 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM Sbjct 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 Query 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI Sbjct 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 Query 181 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTG-----TGNIGSGNTGSGNLGLGNL 235 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIG+ N G TGNIGSGNTGSGNLGLGNL Sbjct 181 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNL 240 Query 236 GDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIG 295 GDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIG Sbjct 241 GDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIG 300 Query 296 NSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGM 355 NSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGM Sbjct 301 NSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGM 360 Query 356 STAALSSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSA 415 STAALSSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSA Sbjct 361 STAALSSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSA 420 Query 416 AAGSGANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAY 475 AAGSGANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAY Sbjct 421 AAGSGANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAY 480 Query 476 ASPRIGQPVGSE 487 ASPRIGQPVGSE Sbjct 481 ASPRIGQPVGSE 492 >gi|1196513|gb|AAA88235.1| unknown protein [Mycobacterium tuberculosis str. Erdman = ATCC 35801] Length=517 Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust. Identities = 482/492 (98%), Positives = 484/492 (99%), Gaps = 5/492 (1%) Query 1 VTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 +TSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW Sbjct 26 LTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 85 Query 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMA ATAFEAALAATVQPAVVAANRGLM Sbjct 86 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMATATAFEAALAATVQPAVVAANRGLM 145 Query 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI Sbjct 146 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 205 Query 181 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTG-----TGNIGSGNTGSGNLGLGNL 235 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIG+ N G TGNIGSGNTGSGNLGLGNL Sbjct 206 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNL 265 Query 236 GDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIG 295 GDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIG Sbjct 266 GDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIG 325 Query 296 NSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGM 355 NSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGM Sbjct 326 NSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGM 385 Query 356 STAALSSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSA 415 STAALSSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSA Sbjct 386 STAALSSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSA 445 Query 416 AAGSGANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAY 475 AAGSGANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAY Sbjct 446 AAGSGANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAY 505 Query 476 ASPRIGQPVGSE 487 ASPRIGQPVGSE Sbjct 506 ASPRIGQPVGSE 517 >gi|289568358|ref|ZP_06448585.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289542111|gb|EFD45760.1| PPE family protein [Mycobacterium tuberculosis T17] Length=476 Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust. Identities = 459/487 (95%), Positives = 462/487 (95%), Gaps = 11/487 (2%) Query 1 VTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 +TSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW Sbjct 1 MTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 Query 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM Sbjct 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 Query 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI Sbjct 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 Query 181 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI 240 DIGKNGQINLGFGNTGSGN IGS + + LGLGNLGDGNI Sbjct 181 DIGKNGQINLGFGNTGSGN----------IGSAHRHRQH-RQRQHRQRQLGLGNLGDGNI 229 Query 241 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL 300 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL Sbjct 230 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL 289 Query 301 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL 360 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL Sbjct 290 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL 349 Query 361 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG 420 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG Sbjct 350 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG 409 Query 421 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI 480 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI Sbjct 410 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI 469 Query 481 GQPVGSE 487 GQPVGSE Sbjct 470 GQPVGSE 476 >gi|306783076|ref|ZP_07421398.1| PPE family protein [Mycobacterium tuberculosis SUMu003] gi|306796182|ref|ZP_07434484.1| PPE family protein [Mycobacterium tuberculosis SUMu006] gi|308332093|gb|EFP20944.1| PPE family protein [Mycobacterium tuberculosis SUMu003] gi|308343350|gb|EFP32201.1| PPE family protein [Mycobacterium tuberculosis SUMu006] Length=477 Score = 751 bits (1938), Expect = 0.0, Method: Compositional matrix adjust. Identities = 470/487 (97%), Positives = 472/487 (97%), Gaps = 10/487 (2%) Query 1 VTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 +TSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW Sbjct 1 MTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 Query 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM Sbjct 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 Query 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI Sbjct 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 Query 181 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI 240 DIGKNGQINLGFGNTGS NIG+ N G NIGSGNTGSGNLGLGNLGDGNI Sbjct 181 DIGKNGQINLGFGNTGS----------GNIGNNNIGNNNIGSGNTGSGNLGLGNLGDGNI 230 Query 241 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL 300 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL Sbjct 231 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL 290 Query 301 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL 360 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL Sbjct 291 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL 350 Query 361 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG 420 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG Sbjct 351 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG 410 Query 421 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI 480 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI Sbjct 411 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI 470 Query 481 GQPVGSE 487 GQPVGSE Sbjct 471 GQPVGSE 477 >gi|308376395|ref|ZP_07438707.2| PPE family protein [Mycobacterium tuberculosis SUMu008] gi|308351190|gb|EFP40041.1| PPE family protein [Mycobacterium tuberculosis SUMu008] Length=469 Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/479 (97%), Positives = 464/479 (97%), Gaps = 10/479 (2%) Query 9 LPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPSAAAM 68 +PPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPSAAAM Sbjct 1 MPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPSAAAM 60 Query 69 MAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLAATNW 128 MAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLAATNW Sbjct 61 MAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLAATNW 120 Query 129 FGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGKNGQI 188 FGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGKNGQI Sbjct 121 FGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGKNGQI 180 Query 189 NLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNIGFGNTGSG 248 NLGFGNTGS NIG+ N G NIGSGNTGSGNLGLGNLGDGNIGFGNTGSG Sbjct 181 NLGFGNTGS----------GNIGNNNIGNNNIGSGNTGSGNLGLGNLGDGNIGFGNTGSG 230 Query 249 NIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSG 308 NIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSG Sbjct 231 NIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSG 290 Query 309 TINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILASA 368 TINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILASA Sbjct 291 TINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILASA 350 Query 369 LGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGLRSP 428 LGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGLRSP Sbjct 351 LGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGLRSP 410 Query 429 GTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRIGQPVGSE 487 GTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRIGQPVGSE Sbjct 411 GTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRIGQPVGSE 469 >gi|289756515|ref|ZP_06515893.1| predicted protein [Mycobacterium tuberculosis T85] gi|289712079|gb|EFD76091.1| predicted protein [Mycobacterium tuberculosis T85] Length=341 Score = 590 bits (1521), Expect = 3e-166, Method: Compositional matrix adjust. Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%) Query 169 APWQQVLRNLGIDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSG 228 APWQQVLRNLGIDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSG Sbjct 23 APWQQVLRNLGIDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSG 82 Query 229 NLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSG 288 NLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSG Sbjct 83 NLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSG 142 Query 289 SGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSA 348 SGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSA Sbjct 143 SGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSA 202 Query 349 GYATGGMSTAALSSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNP 408 GYATGGMSTAALSSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNP Sbjct 203 GYATGGMSTAALSSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNP 262 Query 409 NPGSGSAAAGSGANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPS 468 NPGSGSAAAGSGANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPS Sbjct 263 NPGSGSAAAGSGANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPS 322 Query 469 PDRESAYASPRIGQPVGSE 487 PDRESAYASPRIGQPVGSE Sbjct 323 PDRESAYASPRIGQPVGSE 341 >gi|306774538|ref|ZP_07412875.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001] gi|306970642|ref|ZP_07483303.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010] gi|308379777|ref|ZP_07487537.2| putative PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308216887|gb|EFO76286.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308359763|gb|EFP48614.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010] gi|308363704|gb|EFP52555.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011] Length=395 Score = 582 bits (1501), Expect = 5e-164, Method: Compositional matrix adjust. Identities = 368/487 (76%), Positives = 376/487 (78%), Gaps = 92/487 (18%) Query 1 VTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 +TSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW Sbjct 1 MTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 Query 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM Sbjct 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 Query 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI Sbjct 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 Query 181 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI 240 DIGKNGQINL G GNTGSGN+G+GN G N Sbjct 181 DIGKNGQINL------------------------------GFGNTGSGNIGIGNSGSLNS 210 Query 241 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL 300 G G +G+ N G G ++GS N F N+G N L Sbjct 211 GIGTSGTINAGLG------------SAGSLNTSFWNAGMQNAAL---------------- 242 Query 301 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL 360 GSAAGSEAALVSSAGYATGGMSTAAL Sbjct 243 ----------------------------------GSAAGSEAALVSSAGYATGGMSTAAL 268 Query 361 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG 420 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNP SGSAAAGSG Sbjct 269 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPVSGSAAAGSG 328 Query 421 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI 480 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI Sbjct 329 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASPRI 388 Query 481 GQPVGSE 487 GQPVGSE Sbjct 389 GQPVGSE 395 >gi|408781153|ref|ZP_11192926.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=485 Score = 431 bits (1107), Expect = 2e-118, Method: Compositional matrix adjust. Identities = 327/492 (67%), Positives = 379/492 (78%), Gaps = 12/492 (2%) Query 1 VTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 +T+PHFAWLPPEINSALMFAGPG+GPL+AAA AW LAEEL +S++S SV +ELT+G+W Sbjct 1 MTNPHFAWLPPEINSALMFAGPGAGPLLAAAGAWSGLAEELASSMSSFSSVVAELTNGSW 60 Query 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 LGPS+AAMMAVATQY+AWLS AA QAEQ AAQA A ATAFEAALAATVQPAVVAANRGLM Sbjct 61 LGPSSAAMMAVATQYMAWLSAAATQAEQVAAQAAATATAFEAALAATVQPAVVAANRGLM 120 Query 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 Q+LAATNW G N PA+MD+EAAYEQMWA+DV AMA YH DASAA + LAPWQQVLRNLGI Sbjct 121 QVLAATNWLGFNTPAIMDIEAAYEQMWAMDVVAMATYHADASAAASLLAPWQQVLRNLGI 180 Query 181 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI 240 DIGKNG INLGFGNTGSGNIG N G+ N+G GNTG+ NIG GNTG+ N+G+GNLG+ N+ Sbjct 181 DIGKNGAINLGFGNTGSGNIGIGNTGSGNLGIGNTGSSNIGGGNTGNNNVGMGNLGNSNL 240 Query 241 GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSL 300 G G+TG+ ++G G+TG+++ GFGG NSGSGNIGFGNSGTGNVG FNSG+GN+GIGNSG L Sbjct 241 GIGSTGNHDVGVGLTGNNKFGFGGLNSGSGNIGFGNSGTGNVGFFNSGNGNLGIGNSGLL 300 Query 301 NSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAAL 360 N+G+G SG IN G G+ G ++ W + MQN GS AG +A L +SA YATGG TA L Sbjct 301 NNGLGNSGNINTGFGNVGGMSAGLWPSVMQNNLPGS-AGLDAGLANSASYATGG--TATL 357 Query 361 SSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSG 420 SS IL+SALG TG L GLAN LN AA P G+DS + N G+ +A GS Sbjct 358 SSSILSSALGQTGALHPGLANALNPAPATP-PAATPITPPAGVDS-SANTGNANAGTGSP 415 Query 421 ANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPST-----PGSGIPKSNFYPSPDRESAY 475 AN G R G+ Y SF NSG+ND GLRNT VREP + PGSGIPKS FYPS RE A Sbjct 416 ANAGPRGAGSGYTSFYNSGNNDPGLRNTTVREPVSGAPVLPGSGIPKSTFYPS--REPAD 473 Query 476 ASPRIGQPVGSE 487 I PV S+ Sbjct 474 PGTGIKLPVRSD 485 >gi|118617077|ref|YP_905409.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118569187|gb|ABL03938.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=490 Score = 401 bits (1030), Expect = 2e-109, Method: Compositional matrix adjust. Identities = 314/508 (62%), Positives = 371/508 (74%), Gaps = 39/508 (7%) Query 1 VTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 +T+PHFAWLPPEINSALMFAGPG+GPL+AAA AWG LAEEL ++++S SVTSELTSG+W Sbjct 1 MTNPHFAWLPPEINSALMFAGPGAGPLLAAAAAWGGLAEELASAVSSFSSVTSELTSGSW 60 Query 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 LGPSAAAMMAVATQY+AWL AAAQAEQAAAQA A AFE+ALAATVQPAVV ANRGLM Sbjct 61 LGPSAAAMMAVATQYMAWLGAAAAQAEQAAAQAAVTAGAFESALAATVQPAVVTANRGLM 120 Query 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 Q+LAATNW G N PA++D+EAAYEQMWALDVAAMA YH +ASAA + LAPW+QVLRNLGI Sbjct 121 QVLAATNWLGFNTPAIIDIEAAYEQMWALDVAAMAAYHAEASAAASALAPWKQVLRNLGI 180 Query 181 DIGKNGQINLGF--------------------GNTGSGNIGNNNIGNNNIGSGNTGTGNI 220 DIGKNGQINLGF GNTGS N+G N G++NIG I Sbjct 181 DIGKNGQINLGFGNSGTGNVGNNNVGNDNWGSGNTGSSNVGTGNTGSSNIG--------I 232 Query 221 GSGNTGSGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTG 280 GSGNTG+ N+GLGNLG GN+GFGNTG+G+ GFG+TGDHQ GFGGFNSGSGN+G GNSGTG Sbjct 233 GSGNTGNSNVGLGNLGSGNVGFGNTGNGDFGFGLTGDHQFGFGGFNSGSGNVGIGNSGTG 292 Query 281 NVGLFNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGS 340 NVG FNSG+GN+GIGNSGSLNSG+G SG+++ G G+A ++GM + GS S Sbjct 293 NVGFFNSGNGNMGIGNSGSLNSGLGNSGSMSTGFGTASM------SSGMWQSMHGSDMAS 346 Query 341 EAALVSSAGYATGGMSTAALSSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPV 400 +L SSA YATGG TA LSSGIL+SAL TGGL LA L AAPA+A Sbjct 347 STSLASSATYATGG--TATLSSGILSSALAHTGGLNPALAGGLTPTAATPAAAAPAAAAP 404 Query 401 GGLDSGNPNPGSGSAAAGSGANPGLRSPGTSYPSFVNSGSNDSGLRNTAVRE-PSTPGSG 459 + + P S A +GS A GLRSP Y NS ++D+G R+ A RE P+ G+G Sbjct 405 VAAAAADAGPVSAGANSGSTAGAGLRSPAVGYSGLYNSANSDAGARSVATREAPANAGAG 464 Query 460 IPKSNFYPSPDRESAYASPRIGQPVGSE 487 IP+S+FY P+RE+A + I P+ +E Sbjct 465 IPRSSFY--PNRETADSEADIQLPLRTE 490 >gi|183980785|ref|YP_001849076.1| PPE family protein [Mycobacterium marinum M] gi|183174111|gb|ACC39221.1| PPE family protein, PPE10 [Mycobacterium marinum M] Length=488 Score = 400 bits (1029), Expect = 3e-109, Method: Compositional matrix adjust. Identities = 316/498 (64%), Positives = 376/498 (76%), Gaps = 21/498 (4%) Query 1 VTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 +T+PHFAWLPPEINSALMFAGPG+GPL+AAA AWG LAEEL ++++S SVTSELTSG+W Sbjct 1 MTNPHFAWLPPEINSALMFAGPGAGPLLAAAAAWGGLAEELASAVSSFSSVTSELTSGSW 60 Query 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 LGPSAAAMMAVATQY+AWL AAAQAEQAAAQA A AFE+ALAATVQPAVV ANRGLM Sbjct 61 LGPSAAAMMAVATQYMAWLGAAAAQAEQAAAQAAVTAGAFESALAATVQPAVVTANRGLM 120 Query 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 Q+LAATNW G N PA+MD+EAAYEQMWALDVAAMA YH +ASAA + LAPW+QVLRNLGI Sbjct 121 QVLAATNWLGFNTPAIMDIEAAYEQMWALDVAAMAAYHAEASAAASALAPWKQVLRNLGI 180 Query 181 DIGKNGQINLGF----------GNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNL 230 DIGKNGQINLGF N G+ N G+ N G++N+G+GNTG+ NIGSGNTG+ N+ Sbjct 181 DIGKNGQINLGFGNSGTGNVGNNNVGNNNWGSGNTGSSNVGTGNTGSSNIGSGNTGNSNV 240 Query 231 GLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSG 290 GLGNLG GN+GFGNTG+G+ GFG+TGDHQ GFGGFNSGSGN+G GNSGTGNVG FNSG+G Sbjct 241 GLGNLGSGNVGFGNTGNGDFGFGLTGDHQFGFGGFNSGSGNVGIGNSGTGNVGFFNSGNG 300 Query 291 NIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGY 350 N+GIGNSGSLNSG+G SG+++ G G+A ++GM + GS S +L SSA Y Sbjct 301 NMGIGNSGSLNSGLGNSGSMSTGFGTASM------SSGMWQSMHGSDMASSTSLASSATY 354 Query 351 ATGGMSTAALSSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNP 410 ATGG TA LSSGIL+SAL TGGL LA L AAPA+A + + P Sbjct 355 ATGG--TATLSSGILSSALAHTGGLNPALAGGLTPTAATPAAAAPAAAAPVAAAAADAGP 412 Query 411 GSGSAAAGSGANPGLRSPGTSYPSFVNSGSNDSGLRNTAVRE-PSTPGSGIPKSNFYPSP 469 S A +GS A GLRSP Y NS ++D+G R+ A RE P+ G+GIP+S+FY P Sbjct 413 VSAGANSGSTAGAGLRSPAAGYSGLYNSANSDAGARSVATREAPANAGAGIPRSSFY--P 470 Query 470 DRESAYASPRIGQPVGSE 487 +RE+A + I P+ +E Sbjct 471 NRETADSEADIQLPLRTE 488 >gi|383770|prf||1904209A ORF in repetitive DNA Length=302 Score = 395 bits (1016), Expect = 1e-107, Method: Compositional matrix adjust. Identities = 272/312 (88%), Positives = 276/312 (89%), Gaps = 25/312 (8%) Query 65 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLA 124 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMA ATAFEAALAATVQPAVVAANRGLMQLLA Sbjct 1 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMATATAFEAALAATVQPAVVAANRGLMQLLA 60 Query 125 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGK 184 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGK Sbjct 61 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGK 120 Query 185 NGQINLGF---------------GNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGN 229 NGQINLGF N G+ NIG+ N G NIGSGNTG+GN+G GN G GN Sbjct 121 NGQINLGFGNTGSGNIGNNNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGN 180 Query 230 LGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGS 289 IGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGS Sbjct 181 ----------IGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGS 230 Query 290 GNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAG 349 GNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAG Sbjct 231 GNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAG 290 Query 350 YATGGMSTAALS 361 YATGGMSTAALS Sbjct 291 YATGGMSTAALS 302 >gi|13186194|gb|AAB23767.2| putative host cell receptor binding protein [Mycobacterium bovis] Length=301 Score = 394 bits (1011), Expect = 3e-107, Method: Compositional matrix adjust. Identities = 271/311 (88%), Positives = 275/311 (89%), Gaps = 25/311 (8%) Query 65 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLA 124 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMA ATAFEAALAATVQPAVVAANRGLMQLLA Sbjct 1 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMATATAFEAALAATVQPAVVAANRGLMQLLA 60 Query 125 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGK 184 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGK Sbjct 61 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGK 120 Query 185 NGQINLGF---------------GNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGN 229 NGQINLGF N G+ NIG+ N G NIGSGNTG+GN+G GN G GN Sbjct 121 NGQINLGFGNTGSGNIGNNNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGN 180 Query 230 LGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGS 289 IGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGS Sbjct 181 ----------IGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGS 230 Query 290 GNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAG 349 GNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAG Sbjct 231 GNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAG 290 Query 350 YATGGMSTAAL 360 YATGGMSTAAL Sbjct 291 YATGGMSTAAL 301 >gi|385993539|ref|YP_005911837.1| hypothetical protein [Mycobacterium tuberculosis CCDC5079] gi|339293493|gb|AEJ45604.1| hypothetical protein CCDC5079_0414 [Mycobacterium tuberculosis CCDC5079] Length=299 Score = 385 bits (988), Expect = 2e-104, Method: Compositional matrix adjust. Identities = 251/253 (99%), Positives = 252/253 (99%), Gaps = 0/253 (0%) Query 1 VTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 +TSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW Sbjct 1 MTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 Query 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM Sbjct 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 Query 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI Sbjct 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI 180 Query 181 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI 240 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI Sbjct 181 DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNI 240 Query 241 GFGNTGSGNIGFG 253 GFGNTGSGNIG G Sbjct 241 GFGNTGSGNIGSG 253 >gi|340625774|ref|YP_004744226.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340003964|emb|CCC43099.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=646 Score = 343 bits (880), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 248/556 (45%), Positives = 304/556 (55%), Gaps = 107/556 (19%) Query 6 FAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPSA 65 FAWLPPE NS M+ G GS PL+AAA AW LAEEL A+ +S GSVTSEL GAW GP++ Sbjct 4 FAWLPPETNSLRMYLGAGSQPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 Query 66 AAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLAA 125 AAM +VA Y +WL A AQAE AA QA A A AFE ALA V PAVV ANR LLA Sbjct 64 AAMASVAGPYASWLIAAGAQAELAAGQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 Query 126 TNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGKN 185 +N FGQNAPA+ +EA YEQMWA DVAAMAGYH +SA AQL WQQ L N+ + +G Sbjct 124 SNVFGQNAPAIAAMEATYEQMWAQDVAAMAGYHAASSAVAAQLTSWQQALPNINLGLGNI 183 Query 186 GQINLGFGNT--------------------------------GSGNIGN----------- 202 G +N+G GNT GSGNIGN Sbjct 184 GNLNVGNGNTGDYNLGNGNFGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNGNAG 243 Query 203 ----------NNIGNNNIGSGNTGTGNIGSGNTGSGNLG--------------------- 231 NIGN N+GSGN+G N+G GN G+GN+G Sbjct 244 IGPSSFNVGSGNIGNANVGSGNSGDNNVGFGNLGNGNIGIGNAGPNTGSPATPTPGNGNV 303 Query 232 ---------------------LGNLGDGNIGFGNTGSGN----------IGFGITGDHQM 260 LGN+G+GN+GFGN+GS N IG G+TG +Q+ Sbjct 304 GVGNGGNGNFGGGNTGNANIGLGNVGNGNVGFGNSGSHNFGLGNTGTNNIGIGLTGSNQI 363 Query 261 GFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSL 320 GFGG NSGSGNIGFGNSGTGN+G FNSGSGN G+GNSG N+G+ SG IN G G++G + Sbjct 364 GFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNSGLI 423 Query 321 NTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILASALGSTGGLQHGLA 380 NT F NA N ++ G+ + ++ Y TG + +++G S ++G G A Sbjct 424 NTGFGNASTVNTGFANSGGANTGIGNAGDYNTGNFNGGIINTGSFNSGAFNSGSFNGGNA 483 Query 381 N--VLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGLRSPGTSYPSFVNS 438 N NSGLTNT A + GG ++GN N G G+ A G G N G + G+ F NS Sbjct 484 NSGFFNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTADGPGENSGFGNTGSGNSGFNNS 543 Query 439 GSNDSGLRNTAVREPS 454 G +SG N + S Sbjct 544 GKGNSGAYNLGTLQIS 559 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 85/237 (36%), Positives = 114/237 (49%), Gaps = 35/237 (14%) Query 180 IDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGN 239 I G +G N+GF N+GSGN G N G N G N+G N G GN+G N G GN N Sbjct 375 IGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNSGLINTGFGNASTVN 434 Query 240 IGFGNTGSGNIGFGITGDHQMG---------------------FGG-------FNSGSGN 271 GF N+G N G G GD+ G F G FNSG N Sbjct 435 TGFANSGGANTGIGNAGDYNTGNFNGGIINTGSFNSGAFNSGSFNGGNANSGFFNSGLTN 494 Query 272 IGFGNSGTGNVGLFNSGSGNIGIGNSGS---LNSGIGTSGTINAGLGSAGSLNTSFWNAG 328 GF NSG N G FN+G+ N G GN+ NSG G +G+ N+G ++G N+ +N G Sbjct 495 TGFANSGNINTGGFNAGNLNTGFGNTADGPGENSGFGNTGSGNSGFNNSGKGNSGAYNLG 554 Query 329 -MQNAALGSAAGSEAALVSSAGYAT--GGMSTAALSSGILASALGSTGGLQHGLANV 382 +Q + G++ S + +S + G T + + G + S G+TG LQ G N+ Sbjct 555 TLQISGFGNSGQSVSGYNNSGNIISGFGNKGTGSFNLGFI-SGFGNTGELQSGFGNL 610 >gi|31791942|ref|NP_854435.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|121636678|ref|YP_976901.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989150|ref|YP_002643837.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] 12 more sequence titles Length=645 Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 241/556 (44%), Positives = 298/556 (54%), Gaps = 107/556 (19%) Query 6 FAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPSA 65 FAWLPPE NS M+ G GS PL+AAA AW LAEEL A+ +S GSVTSEL GAW GP++ Sbjct 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 Query 66 AAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLAA 125 AAM A Y +WL+ A AQAE AA QA A A AFE ALA V PAVV ANR LLA Sbjct 64 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 Query 126 TNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGKN 185 +N FGQNAPA+ +E+ YEQMWA DVA MAGYH +SAA AQLA WQ L N+ + +G Sbjct 124 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGVGNI 183 Query 186 GQINLGFGNTG---------------------------SGNIGNNNIGNNNIGSGNTGTG 218 G +N+G GNTG S N+G+ NIGN N+GSGN G Sbjct 184 GNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNGNVG 243 Query 219 ------NIGSGNTGSGNLGLGNLGDG----------NIG--------------------- 241 N+GSGN G+ N+G GN GD NIG Sbjct 244 IGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNV 303 Query 242 ---------------------FGNTGSGNIGF--------------------GITGDHQM 260 GN G GN+GF G+TG +Q+ Sbjct 304 GIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQI 363 Query 261 GFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSL 320 GFGG NSGSGNIGFGNSGTGN+G FNSGSGN G+GNSG N+G+ SG IN G G++G + Sbjct 364 GFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNSGFI 423 Query 321 NTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILASALGSTGGLQHGLA 380 NT F NA N G++ + + ++ + TG + +++G S ++G G A Sbjct 424 NTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDA 483 Query 381 N--VLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGLRSPGTSYPSFVNS 438 N LNSGLTNT A + GG ++GN N G G+ G G N G + G+ F NS Sbjct 484 NSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNS 543 Query 439 GSNDSGLRNTAVREPS 454 G +SG +N + S Sbjct 544 GKGNSGAQNVGNLQIS 559 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 69/178 (39%), Positives = 86/178 (49%), Gaps = 31/178 (17%) Query 188 INLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNIGFGNTGS 247 +N GFGN+G N G N G+ N G+ N G N GS N+G+ N G N GD N GF N+G Sbjct 433 VNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGL 492 Query 248 GNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTG---NVGLFNSGSGNIGIGNSGSLNSG- 303 N GF +G+ G GFN+G+ N GFGN+ G N G N+GSGN G NSG NSG Sbjct 493 TNTGFANSGNINTG--GFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGKGNSGA 550 Query 304 --IG-----------------------TSGTINAGLGSAGSLNTSFWNAGMQNAALGS 336 +G TSG N G G + F N G + G+ Sbjct 551 QNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGN 608 >gi|57116777|ref|YP_177753.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148660531|ref|YP_001282054.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|148821960|ref|YP_001286714.1| PPE family protein [Mycobacterium tuberculosis F11] 26 more sequence titles Length=645 Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 241/556 (44%), Positives = 298/556 (54%), Gaps = 107/556 (19%) Query 6 FAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPSA 65 FAWLPPE NS M+ G GS PL+AAA AW LAEEL A+ +S GSVTSEL GAW GP++ Sbjct 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 Query 66 AAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLAA 125 AAM A Y +WL+ A AQAE AA QA A A AFE ALA V PAVV ANR LLA Sbjct 64 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 Query 126 TNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGKN 185 +N FGQNAPA+ +E+ YEQMWA DVA MAGYH +SAA AQLA WQ L N+ + +G Sbjct 124 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGVGNI 183 Query 186 GQINLGFGNTG---------------------------SGNIGNNNIGNNNIGSGNTGTG 218 G +N+G GNTG S N+G+ NIGN N+GSGN G Sbjct 184 GNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNGNVG 243 Query 219 ------NIGSGNTGSGNLGLGNLGDG----------NIG--------------------- 241 N+GSGN G+ N+G GN GD NIG Sbjct 244 IGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNV 303 Query 242 ---------------------FGNTGSGNIGF--------------------GITGDHQM 260 GN G GN+GF G+TG +Q+ Sbjct 304 GIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQI 363 Query 261 GFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSL 320 GFGG NSGSGNIGFGNSGTGN+G FNSGSGN G+GNSG N+G+ SG IN G G++G + Sbjct 364 GFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNSGFI 423 Query 321 NTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILASALGSTGGLQHGLA 380 NT F NA N G++ + + ++ + TG + +++G S ++G G A Sbjct 424 NTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDA 483 Query 381 N--VLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGLRSPGTSYPSFVNS 438 N LNSGLTNT A + GG ++GN N G G+ G G N G + G+ F NS Sbjct 484 NSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNS 543 Query 439 GSNDSGLRNTAVREPS 454 G +SG +N + S Sbjct 544 GRGNSGAQNVGNLQIS 559 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 69/178 (39%), Positives = 86/178 (49%), Gaps = 31/178 (17%) Query 188 INLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNIGFGNTGS 247 +N GFGN+G N G N G+ N G+ N G N GS N+G+ N G N GD N GF N+G Sbjct 433 VNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGL 492 Query 248 GNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTG---NVGLFNSGSGNIGIGNSGSLNSG- 303 N GF +G+ G GFN+G+ N GFGN+ G N G N+GSGN G NSG NSG Sbjct 493 TNTGFANSGNINTG--GFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGA 550 Query 304 --IG-----------------------TSGTINAGLGSAGSLNTSFWNAGMQNAALGS 336 +G TSG N G G + F N G + G+ Sbjct 551 QNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGN 608 >gi|15840169|ref|NP_335206.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|253797700|ref|YP_003030701.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|289744479|ref|ZP_06503857.1| predicted protein [Mycobacterium tuberculosis 02_1987] 39 more sequence titles Length=646 Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 241/556 (44%), Positives = 298/556 (54%), Gaps = 107/556 (19%) Query 6 FAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPSA 65 FAWLPPE NS M+ G GS PL+AAA AW LAEEL A+ +S GSVTSEL GAW GP++ Sbjct 5 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 64 Query 66 AAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLAA 125 AAM A Y +WL+ A AQAE AA QA A A AFE ALA V PAVV ANR LLA Sbjct 65 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 124 Query 126 TNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGKN 185 +N FGQNAPA+ +E+ YEQMWA DVA MAGYH +SAA AQLA WQ L N+ + +G Sbjct 125 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGVGNI 184 Query 186 GQINLGFGNTG---------------------------SGNIGNNNIGNNNIGSGNTGTG 218 G +N+G GNTG S N+G+ NIGN N+GSGN G Sbjct 185 GNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNGNVG 244 Query 219 ------NIGSGNTGSGNLGLGNLGDG----------NIG--------------------- 241 N+GSGN G+ N+G GN GD NIG Sbjct 245 IGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNV 304 Query 242 ---------------------FGNTGSGNIGF--------------------GITGDHQM 260 GN G GN+GF G+TG +Q+ Sbjct 305 GIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQI 364 Query 261 GFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSL 320 GFGG NSGSGNIGFGNSGTGN+G FNSGSGN G+GNSG N+G+ SG IN G G++G + Sbjct 365 GFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNSGFI 424 Query 321 NTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILASALGSTGGLQHGLA 380 NT F NA N G++ + + ++ + TG + +++G S ++G G A Sbjct 425 NTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDA 484 Query 381 N--VLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGLRSPGTSYPSFVNS 438 N LNSGLTNT A + GG ++GN N G G+ G G N G + G+ F NS Sbjct 485 NSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNS 544 Query 439 GSNDSGLRNTAVREPS 454 G +SG +N + S Sbjct 545 GRGNSGAQNVGNLQIS 560 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 69/178 (39%), Positives = 86/178 (49%), Gaps = 31/178 (17%) Query 188 INLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNIGFGNTGS 247 +N GFGN+G N G N G+ N G+ N G N GS N+G+ N G N GD N GF N+G Sbjct 434 VNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGL 493 Query 248 GNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTG---NVGLFNSGSGNIGIGNSGSLNSG- 303 N GF +G+ G GFN+G+ N GFGN+ G N G N+GSGN G NSG NSG Sbjct 494 TNTGFANSGNINTG--GFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGA 551 Query 304 --IG-----------------------TSGTINAGLGSAGSLNTSFWNAGMQNAALGS 336 +G TSG N G G + F N G + G+ Sbjct 552 QNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGN 609 >gi|289568706|ref|ZP_06448933.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289542460|gb|EFD46108.1| PPE family protein [Mycobacterium tuberculosis T17] Length=656 Score = 293 bits (749), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 240/566 (43%), Positives = 297/566 (53%), Gaps = 117/566 (20%) Query 6 FAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPSA 65 FAWLPPE NS M+ G GS PL+AAA AW LAEEL A+ +S GSVTSEL GAW GP++ Sbjct 5 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 64 Query 66 AAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLAA 125 AAM A Y +WL+ A AQAE AA QA A A AFE ALA V PAVV ANR LLA Sbjct 65 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 124 Query 126 TNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGKN 185 +N FGQNAPA+ +E+ YEQMWA DVA MAGYH +SAA AQLA WQ L N+ + +G Sbjct 125 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGVGNI 184 Query 186 GQINLGFGNTG---------------------------SGNIGNNNIGNNNIGSGNTGTG 218 G +N+G GNTG S N+G+ NIGN N+GSGN G Sbjct 185 GNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNGNVG 244 Query 219 ------NIGSGNTGSGNLGLGNLGDG----------NIG--------------------- 241 N+GSGN G+ N+G GN GD NIG Sbjct 245 IGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNV 304 Query 242 ---------------------FGNTGSGNIGFGITGDH---------------------- 258 GN G GN+GFG +G + Sbjct 305 GIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNSGSYNFGFGNTGNNNI 364 Query 259 --------QMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTI 310 Q+GFGG NSGSGNIGFGNSGTGN+G FNSGSGN G+GNSG N+G+ SG I Sbjct 365 GIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNI 424 Query 311 NAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILASALG 370 N G G++G +NT F NA N G++ + + ++ + TG + +++G S Sbjct 425 NTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAF 484 Query 371 STGGLQHGLAN--VLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGLRSP 428 ++G G AN LNSGLTNT A + GG ++GN N G G+ G G N G + Sbjct 485 NSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNA 544 Query 429 GTSYPSFVNSGSNDSGLRNTAVREPS 454 G+ F NSG +SG +N + S Sbjct 545 GSGNSGFNNSGKGNSGAQNVGNLQIS 570 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 69/178 (39%), Positives = 86/178 (49%), Gaps = 31/178 (17%) Query 188 INLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNIGFGNTGS 247 +N GFGN+G N G N G+ N G+ N G N GS N+G+ N G N GD N GF N+G Sbjct 444 VNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGL 503 Query 248 GNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTG---NVGLFNSGSGNIGIGNSGSLNSG- 303 N GF +G+ G GFN+G+ N GFGN+ G N G N+GSGN G NSG NSG Sbjct 504 TNTGFANSGNINTG--GFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGKGNSGA 561 Query 304 --IG-----------------------TSGTINAGLGSAGSLNTSFWNAGMQNAALGS 336 +G TSG N G G + F N G + G+ Sbjct 562 QNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGN 619 >gi|340626927|ref|YP_004745379.1| ppe family protein [Mycobacterium canettii CIPT 140010059] gi|340005117|emb|CCC44266.1| ppe family protein [Mycobacterium canettii CIPT 140010059] Length=2222 Score = 290 bits (741), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 194/398 (49%), Positives = 255/398 (65%), Gaps = 33/398 (8%) Query 5 HFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPS 64 +F+ LPPEINSAL+F G GS P+ AAA AW +LA EL ++ AS SVTS L +WLGPS Sbjct 2 NFSTLPPEINSALIFGGAGSEPMSAAAVAWDQLAMELASAAASFNSVTSGLVGESWLGPS 61 Query 65 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLA 124 +AAM A A YL WL+TAAAQA+++A QA A+ T FEA AA VQPA+VAANR + L Sbjct 62 SAAMAAAAAPYLGWLATAAAQAQRSATQAAALVTEFEAVRAAMVQPALVAANRSDLVSLV 121 Query 125 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNL------ 178 +N FGQNAPA+ +EAAYEQMWA+DV+ M+ YH ASA + L P+ +NL Sbjct 122 FSNLFGQNAPAIAAIEAAYEQMWAIDVSVMSAYHAGASAVASALTPFTAPPQNLTGLPAQ 181 Query 179 -----------GIDIGKN--GQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNT 225 I K ++LG N+G G++G N+G N+G N G N G GN Sbjct 182 LAAAPAAVVNAAITSSKGVLANLSLGLANSGFGHMGAANLGILNLGGLNPGGNNFGLGNV 241 Query 226 GSGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLF 285 GS N+GLGN G+GNIGFGNTG+GNIGFG+TGD+Q GFGG+NSG+GNIG NSGTGN+G+ Sbjct 242 GSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIG 301 Query 286 NSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALV 345 N+G+GN GIGNSG+ + N G+G+ G NT F+NAG+ N +G+ Sbjct 302 NTGTGNFGIGNSGA---------SYNTGIGNTGQANTGFFNAGIANTGIGNTGNYNTGSF 352 Query 346 SSAGYATGGMSTAALSSGI-----LASALGSTGGLQHG 378 + + TG +T + ++G L + +G+TG + G Sbjct 353 NLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGNVNTG 390 Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 89/148 (61%), Positives = 107/148 (73%), Gaps = 6/148 (4%) Query 190 LGFGNTGSGNIGNNNIGNNNIGSGNTGTG------NIGSGNTGSGNLGLGNLGDGNIGFG 243 GFGN GS N G N+G+NN+G NTG G NIG GN G N G N+G+GNIGFG Sbjct 1286 FGFGNIGSNNFGFGNVGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFG 1345 Query 244 NTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSG 303 NTG+GNIG G+TGD+Q+GFG NSGSGNIGF NSG GN+G FNSG+GN+GIGNSG+ N+G Sbjct 1346 NTGTGNIGIGLTGDNQVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTG 1405 Query 304 IGTSGTINAGLGSAGSLNTSFWNAGMQN 331 +G G N GL + G++NT NAG N Sbjct 1406 LGNVGNANTGLFNTGNVNTGIGNAGSYN 1433 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 80/186 (44%), Positives = 103/186 (56%), Gaps = 18/186 (9%) Query 171 WQQVLRNLGI-DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSG--NTGS 227 + L N+G +IG N N GF N G+GNIG N G NIG G TG +G G N+GS Sbjct 1315 LTEALHNIGFGNIGGN---NYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGS 1371 Query 228 GNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNS 287 GN+G N G+GNIGF N+G+GN+G G NSG+ N G GN G N GLFN+ Sbjct 1372 GNIGFFNSGNGNIGFFNSGNGNVGIG------------NSGNYNTGLGNVGNANTGLFNT 1419 Query 288 GSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSS 347 G+ N GIGN+GS N+G +G N G + G+ NT + N G N G+ + S Sbjct 1420 GNVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1479 Query 348 AGYATG 353 Y+ G Sbjct 1480 GSYSNG 1485 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/152 (41%), Positives = 78/152 (52%), Gaps = 18/152 (11%) Query 177 NLGIDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLG 236 N+GI + + Q+ G N+GSGNIG N GN NIG N+G GN+G GN+G+ N GLGN+G Sbjct 1351 NIGIGLTGDNQVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVG 1410 Query 237 DGNIGFGNTGSGNIGFGITGDHQMG------------------FGGFNSGSGNIGFGNSG 278 + N G NTG+ N G G G + G G N G N G+GN G Sbjct 1411 NANTGLFNTGNVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIG 1470 Query 279 TGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTI 310 N G SGS + GI G IG S T+ Sbjct 1471 DLNTGALISGSYSNGILWRGDYQGLIGYSDTL 1502 Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust. Identities = 56/143 (40%), Positives = 67/143 (47%), Gaps = 24/143 (16%) Query 209 NIGSGNTGTGNIGSGNTG-SGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNS 267 N+GSG +G NI +GN G SG L +G L G + FGNT SG T + F+S Sbjct 1167 NVGSGGSGFWNI-AGNLGNSGFLNVGPLTSGILNFGNTVSGLYN---TSTLGLATSAFHS 1222 Query 268 GSG-------------------NIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSG 308 G G N GF N GT N+G N G N+G GN GS N G G G Sbjct 1223 GVGNTDSQLAGFMRNAAGGTLFNFGFANDGTLNLGNANLGDYNVGSGNVGSYNFGSGNIG 1282 Query 309 TINAGLGSAGSLNTSFWNAGMQN 331 + G G+ GS N F N G N Sbjct 1283 NGSFGFGNIGSNNFGFGNVGSNN 1305 >gi|15843145|ref|NP_338182.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|31794709|ref|NP_857202.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|57117121|ref|YP_177985.1| PPE family protein [Mycobacterium tuberculosis H37Rv] 53 more sequence titles Length=582 Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 239/529 (46%), Positives = 290/529 (55%), Gaps = 96/529 (18%) Query 5 HFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPS 64 ++A LPPE+NS MF G GS P++AAA AW LA EL ++ +S GSVTS+L S AW GP+ Sbjct 2 NYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGPA 61 Query 65 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLA 124 AAAM A A Y WLS AAA+A AAAQA A+A+AFEAA AATV P +VAANR L Sbjct 62 AAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLV 121 Query 125 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNL-GIDIG 183 +NWFG NAP + VE AYEQMWA DVAAM GYH ASAA QL P+QQ L+ L + IG Sbjct 122 MSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIG 181 Query 184 KNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGS--------------------- 222 G NLG GNTG N GN NIGN N+GSGN G N+GS Sbjct 182 NIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSG 241 Query 223 ------------------------GNTGSGNLGLGNLGDGNI------------------ 240 GNTG+ N+G GN G+ N+ Sbjct 242 NGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSS 301 Query 241 ------------GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSG 288 GFGNTG+GNIGFG+TG++Q+G GG NSGSGNIG NSGT NVG FNSG Sbjct 302 NWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSG 361 Query 289 SGNIGIGNSGSLNSGIGTSGTI--------NAGLGSAGSLNTSFWNAGMQNAALGSAAGS 340 +GN+GIGNS N GIG SG N G G++GSLNT NAG N G+ Sbjct 362 NGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAI 421 Query 341 EAALVSSAGYATGGMSTAALSSGILASALGSTGGLQHGLANV--LNSGLTNTPVAAPASA 398 +S G + ++++G S G+TG G+ N NSGLTNT Sbjct 422 NLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNT-------- 473 Query 399 PVGGLDSGNPNPGSGSAAAGSGANPGLRSPGTSYPSFVNSGSNDSGLRN 447 G ++G+ N G G+ GSG N G + GT+ F N+G SG +N Sbjct 474 --GAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQN 520 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 123/308 (40%), Positives = 162/308 (53%), Gaps = 61/308 (19%) Query 195 TGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNIGFGNTGSGNIGFGI 254 TG+ N+G N GNNN+G+GN G+GNIG+GNTGS N G GN G GNIGFGNTG+GNIGFG+ Sbjct 268 TGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGL 327 Query 255 TGDHQMGFGGFNSGSGNIG----------------------------------------- 273 TG++Q+G GG NSGSGNIG Sbjct 328 TGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPF 387 Query 274 -------FGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWN 326 FGNSG+ N G+ N+G N G GN G++N G G SG +NAG +AGS+NT +N Sbjct 388 VAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFN 447 Query 327 AGMQNAALGSAAGSEAALVSSAGYATGGMS-TAALSSGILASALGSTG---GLQHGLAN- 381 +G N G A V + G++ G++ T A ++G L + G+ G G G N Sbjct 448 SGQGN------TGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNA 501 Query 382 -VLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGLRSPGTSYPSFVNSGS 440 NSG NT V + G +SG N AAG G N G ++ G + +NSG Sbjct 502 GTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFG-NTGAQTVGIANSGVLNSGF 560 Query 441 NDSGLRNT 448 +SG+ N+ Sbjct 561 FNSGVHNS 568 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 70/170 (42%), Positives = 93/170 (55%), Gaps = 8/170 (4%) Query 178 LGIDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGD 237 L +G G +N GFGN G+ N+G N G N GS N G+ N G+ N+G GN G N G Sbjct 401 LNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGV 460 Query 238 GNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSG-NIGFGNSGTGNVGLFNSGSGNIGIGN 296 N G+ N+G N G G GFG +GSG N GFGN+GT N G FN+G G+ G N Sbjct 461 RNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQN 520 Query 297 SGSLNSGIGTS-GTI------NAGLGSAGSLNTSFWNAGMQNAALGSAAG 339 GS NSG+ + GT+ N G + G N+ N+G N+ + ++ G Sbjct 521 GGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGG 570 >gi|289440962|ref|ZP_06430706.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289571774|ref|ZP_06452001.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289413881|gb|EFD11121.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289545528|gb|EFD49176.1| PPE family protein [Mycobacterium tuberculosis T17] Length=582 Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 249/577 (44%), Positives = 304/577 (53%), Gaps = 118/577 (20%) Query 5 HFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPS 64 ++A LPPE+NS MF G GS P++AAA AW LA EL ++ +S GSVTS+L S AW GP+ Sbjct 2 NYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGPA 61 Query 65 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLA 124 AAAM A A Y WLS AAA+A AAAQA A+A+AFEAA AATV P +VAANR L Sbjct 62 AAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLV 121 Query 125 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNL-GIDIG 183 +NWFG NAP + VE AYEQMWA DVAAM GYH ASAA QL P+QQ L+ L + IG Sbjct 122 MSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIG 181 Query 184 KNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGS--------------------- 222 G NLG GNTG N GN NIGN N+GSGN G N+GS Sbjct 182 NIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSG 241 Query 223 ------------------------GNTGSGNLGLGNLGDGNI------------------ 240 GNTG+ N+G GN G+ N+ Sbjct 242 NGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSS 301 Query 241 ------------GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSG 288 GFGNTG+GNIGFG+TG++Q+G GG NSGSGNIG NSGT NVG FNSG Sbjct 302 NWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSG 361 Query 289 SGNIGIGNSGSLNSGIGTSGTI--------NAGLGSAGSLNTSFWNAGMQNAALGSAAGS 340 +GN+GIGNS N GIG SG N G G++GSLNT NAG N G+ Sbjct 362 NGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAI 421 Query 341 EAALVSSAGYATGGMSTAALSSGILASALGSTGGLQHGLANV--LNSGLTNTPVAAPASA 398 +S G + ++++G S G+TG G+ N NSGLTNT Sbjct 422 NLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNT-------- 473 Query 399 PVGGLDSGNPNPGSGSAAAGSGANPGLRSPGTSYPSFVNS----------GSNDSGLR-- 446 G ++G+ N G G+ GSG N G + GT+ F N+ GSN+SGL+ Sbjct 474 --GAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNA 531 Query 447 ----------NTAVREPSTPGSGIPKSNFYPSPDRES 473 NT + SG+ S F+ S S Sbjct 532 VGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSSVHNS 568 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 72/170 (43%), Positives = 91/170 (54%), Gaps = 17/170 (10%) Query 182 IGKNGQINLGFGNTG-----SGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLG 236 G G INLGFGN+G S N G+ N GN N G GNTG N G NTG N GL N G Sbjct 415 FGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTG 474 Query 237 -----DGNIGFGNTGSG---NIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSG 288 N GFG G+G N GFG G + GF FN+G G+ GF N G+ N GL N+ Sbjct 475 AFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGF--FNTGVGSSGFQNGGSNNSGLQNAV 532 Query 289 SGNI--GIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGS 336 I G GN+G+ GI SG +N+G ++ N+ +N+ Q + G+ Sbjct 533 GTVIAAGFGNTGAQTVGIANSGVLNSGFFNSSVHNSGGFNSENQRSGFGN 582 >gi|379029917|dbj|BAL67650.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC 35801] Length=582 Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 238/529 (45%), Positives = 289/529 (55%), Gaps = 96/529 (18%) Query 5 HFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPS 64 ++A LPPE+NS MF G GS P++AAA AW LA EL ++ +S GSVTS+L S AW GP+ Sbjct 2 NYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGPA 61 Query 65 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLA 124 AAAM A A Y WLS AAA+A AAAQA A+A+AFEAA AATV P +VAANR L Sbjct 62 AAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLV 121 Query 125 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNL-GIDIG 183 +NWFG NAP + VE AYEQMWA DVAAM GYH ASAA QL P+QQ L+ L + IG Sbjct 122 MSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIG 181 Query 184 KNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGS--------------------- 222 G NLG GNTG N GN NIGN N+GSGN G N+GS Sbjct 182 NIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNGNFGSG 241 Query 223 ------------------------GNTGSGNLGLGNLGDGNI------------------ 240 GNTG+ N+G GN G+ N+ Sbjct 242 NGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSS 301 Query 241 ------------GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSG 288 GFGNTG+GNIGFG+TG++Q+G GG NSG GNIG NSGT NVG FNSG Sbjct 302 NWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGRGNIGLFNSGTNNVGFFNSG 361 Query 289 SGNIGIGNSGSLNSGIGTSGTI--------NAGLGSAGSLNTSFWNAGMQNAALGSAAGS 340 +GN+GIGNS N GIG SG N G G++GSLNT NAG N G+ Sbjct 362 NGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAI 421 Query 341 EAALVSSAGYATGGMSTAALSSGILASALGSTGGLQHGLANV--LNSGLTNTPVAAPASA 398 +S G + ++++G S G+TG G+ N NSGLTNT Sbjct 422 NLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNT-------- 473 Query 399 PVGGLDSGNPNPGSGSAAAGSGANPGLRSPGTSYPSFVNSGSNDSGLRN 447 G ++G+ N G G+ GSG N G + GT+ F N+G SG +N Sbjct 474 --GAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQN 520 Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 122/308 (40%), Positives = 161/308 (53%), Gaps = 61/308 (19%) Query 195 TGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNIGFGNTGSGNIGFGI 254 TG+ N+G N GNNN+G+GN G+GNIG+GNTGS N G GN G GNIGFGNTG+GNIGFG+ Sbjct 268 TGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGNIGFGL 327 Query 255 TGDHQMGFGGFNSGSGNIG----------------------------------------- 273 TG++Q+G GG NSG GNIG Sbjct 328 TGNNQVGIGGLNSGRGNIGLFNSGTNNVGFFNSGNGNLGIGNSSDANVGIGNSGATVGPF 387 Query 274 -------FGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWN 326 FGNSG+ N G+ N+G N G GN G++N G G SG +NAG +AGS+NT +N Sbjct 388 VAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFN 447 Query 327 AGMQNAALGSAAGSEAALVSSAGYATGGMS-TAALSSGILASALGSTG---GLQHGLAN- 381 +G N G A V + G++ G++ T A ++G L + G+ G G G N Sbjct 448 SGQGN------TGDFNAGVRNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNA 501 Query 382 -VLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGLRSPGTSYPSFVNSGS 440 NSG NT V + G +SG N AAG G N G ++ G + +NSG Sbjct 502 GTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFG-NTGAQTVGIANSGVLNSGF 560 Query 441 NDSGLRNT 448 +SG+ N+ Sbjct 561 FNSGVHNS 568 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 70/170 (42%), Positives = 93/170 (55%), Gaps = 8/170 (4%) Query 178 LGIDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGD 237 L +G G +N GFGN G+ N+G N G N GS N G+ N G+ N+G GN G N G Sbjct 401 LNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGV 460 Query 238 GNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSG-NIGFGNSGTGNVGLFNSGSGNIGIGN 296 N G+ N+G N G G GFG +GSG N GFGN+GT N G FN+G G+ G N Sbjct 461 RNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQN 520 Query 297 SGSLNSGIGTS-GTI------NAGLGSAGSLNTSFWNAGMQNAALGSAAG 339 GS NSG+ + GT+ N G + G N+ N+G N+ + ++ G Sbjct 521 GGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGG 570 >gi|340628497|ref|YP_004746949.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340006687|emb|CCC45875.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=582 Score = 286 bits (732), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 250/569 (44%), Positives = 301/569 (53%), Gaps = 102/569 (17%) Query 5 HFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPS 64 ++A LPPE+NS MF G GS P++AAA AW LA EL ++ +S GSVTS L S AW GP+ Sbjct 2 NYAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSSLASQAWQGPA 61 Query 65 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLA 124 AAAM A A Y WLS AAA+A AAAQA A+A+AFEAA AATV P VVAANR L Sbjct 62 AAAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLVVAANRSAFAQLV 121 Query 125 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNL-GIDIG 183 +NWFG NAP + VE AYEQMWA DVAAM GYH ASAA QL P+QQ L+ L + IG Sbjct 122 MSNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIG 181 Query 184 KNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGS--------------------- 222 G NLG GNTG N GN NIGN N+GSGN G N+GS Sbjct 182 NIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNFGNGNFGSG 241 Query 223 ------------------------GNTGSGNLGLGNLGDGNI------------------ 240 GNTG+ N+G GN G+ N+ Sbjct 242 NGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAGNTGSS 301 Query 241 ------------GFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSG 288 GFGNTG+GNIGFG+TG++Q+G GG NSGSGNIG NSGT NVG FNSG Sbjct 302 NWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSG 361 Query 289 SGNIGIGNSGSLNSGIGTSGTI--------NAGLGSAGSLNTSFWNAGMQNAALGSAAGS 340 +GN+GIGNS N GIG SG N G G++GSLNT NAG N G+ Sbjct 362 NGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAI 421 Query 341 EAALVSSAGYATGGMSTAALSSGILASALGSTGGLQHGLANV--LNSGLTNTPV--AAPA 396 +S G + ++++G S G+TG G+ N NSGLTNT A Sbjct 422 NLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTGAFNAGSL 481 Query 397 SAPVGGLDSGNPNPGSGSAAAGSGANPGLRSPGTSYPSFVNSGSNDSGLR---------- 446 + G + +G P P SG AG+ N G + G F N GSN+SGL+ Sbjct 482 NTGFGAVGTG-PGPNSGFGNAGT-NNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAG 539 Query 447 --NTAVREPSTPGSGIPKSNFYPSPDRES 473 NT + SG+ S F+ S S Sbjct 540 FGNTGAQTVGIANSGVLNSGFFNSGVHNS 568 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 71/157 (46%), Positives = 82/157 (53%), Gaps = 27/157 (17%) Query 182 IGKNGQINLGFGNTG-----SGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLG 236 G G INLGFGN+G S N G+ N GN N G GNTG N G NTG N GL N G Sbjct 415 FGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTG 474 Query 237 -----DGNIGFGNTGSG---NIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFN-- 286 N GFG G+G N GFG G + GF FN+G G+ GF N G+ N GL N Sbjct 475 AFNAGSLNTGFGAVGTGPGPNSGFGNAGTNNSGF--FNTGVGSSGFQNGGSNNSGLQNAV 532 Query 287 ----------SGSGNIGIGNSGSLNSGIGTSGTINAG 313 +G+ +GI NSG LNSG SG N+G Sbjct 533 GTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSG 569 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 69/170 (41%), Positives = 92/170 (55%), Gaps = 8/170 (4%) Query 178 LGIDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGD 237 L +G G +N GFGN G+ N+G N G N GS N G+ N G+ N+G GN G N G Sbjct 401 LNTGMGNAGGVNTGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGV 460 Query 238 GNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSG-NIGFGNSGTGNVGLFNSGSGNIGIGN 296 N G+ N+G N G G GFG +G G N GFGN+GT N G FN+G G+ G N Sbjct 461 RNTGWSNSGLTNTGAFNAGSLNTGFGAVGTGPGPNSGFGNAGTNNSGFFNTGVGSSGFQN 520 Query 297 SGSLNSGIGTS-GTI------NAGLGSAGSLNTSFWNAGMQNAALGSAAG 339 GS NSG+ + GT+ N G + G N+ N+G N+ + ++ G Sbjct 521 GGSNNSGLQNAVGTVIAAGFGNTGAQTVGIANSGVLNSGFFNSGVHNSGG 570 >gi|183981653|ref|YP_001849944.1| PPE family protein [Mycobacterium marinum M] gi|183174979|gb|ACC40089.1| PPE family protein [Mycobacterium marinum M] Length=2754 Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 201/423 (48%), Positives = 250/423 (60%), Gaps = 49/423 (11%) Query 5 HFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPS 64 +FA LPPEINSA +F+G GSGP++AAATAW LA EL ++ A+ +VTS LT +W GP+ Sbjct 2 NFAVLPPEINSARLFSGAGSGPVLAAATAWTGLAAELRSAAAAFLAVTSGLTGNSWRGPA 61 Query 65 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLA 124 AA M VA Y+ WLS + A AEQAA QA A FEAA A TVQP +VAANR + L Sbjct 62 AAVMSDVAASYVGWLSASGAHAEQAAEQAKTAAQVFEAARAVTVQPGLVAANRAQLVSLV 121 Query 125 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAP--W----------- 171 +N FGQNAPA+ EA YEQMWA DV AM YH AS+ A L P W Sbjct 122 GSNLFGQNAPAIATAEAQYEQMWAQDVVAMLDYHAGASSVAAALTPLSWPTQTLAGLAAP 181 Query 172 ----QQVLRNLGIDIG------------KNGQINLGFGNTGSGNIGNNNIGNNNIGSGNT 215 V R++ ++G G NLG GN GSGN+G+ NIG N+GSGN Sbjct 182 AAALGSVARSISFNVGFANAGQGNVGAANIGDFNLGLGNIGSGNVGSGNIGGINVGSGNR 241 Query 216 GTGNIGSGNTGSGNLGLGNLGDGNIGFGN--------------------TGSGNIGFGIT 255 G+ NIG GN G N+GLGNLGD ++GFGN TGS NIG G++ Sbjct 242 GSYNIGPGNLGDYNIGLGNLGDSSVGFGNAGDHNVGVANAGFNNFGFANTGSNNIGIGLS 301 Query 256 GDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTINAGLG 315 GD Q+G G NSG+GNIG NSGT N+GLFNSG+GN GIGNSG N+GIG +G N GL Sbjct 302 GDGQVGIGALNSGTGNIGLFNSGTDNIGLFNSGTGNFGIGNSGDYNTGIGNAGATNTGLL 361 Query 316 SAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILASALGSTGGL 375 +AG +NT NAG N+ +A + +S Y TG ++ ++G+ S +TG Sbjct 362 NAGLVNTGVGNAGNYNSGGFNAGHTNTGSFNSGDYNTGYLNPGNYNTGLANSGDVNTGAF 421 Query 376 QHG 378 G Sbjct 422 ISG 424 Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 123/285 (44%), Positives = 162/285 (57%), Gaps = 27/285 (9%) Query 187 QINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNIGFGNTG 246 +NLGFGN G NIG N+G+ NIG GN G N+G GN G N+G+GN G N GF NTG Sbjct 2434 SLNLGFGNLGDHNIGPGNLGDYNIGLGNLGDSNVGFGNAGDHNVGVGNAGFNNFGFANTG 2493 Query 247 SGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGT 306 S NIG G++GD Q+GFG NSG+GNIG NSGT N+GLFNSG+GNIG+ NSG+ + GIG Sbjct 2494 SNNIGIGLSGDGQVGFGALNSGTGNIGLFNSGTDNIGLFNSGTGNIGLFNSGTGSFGIGN 2553 Query 307 SGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILA 366 SG N G+G+AG+ NT +N G+ N +G+A +S G+ TG +T + +SG Sbjct 2554 SGNYNTGIGNAGATNTGLFNTGLVNTGVGNAGN-----YNSGGFNTGSTNTGSFNSGDHN 2608 Query 367 SALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVG--------GLDSGNP-------NPG 411 + ++G GLA NSG NT + G GL G P NP Sbjct 2609 TGYLNSGDYNTGLA---NSGDVNTGAFISGNYSNGFFVDGDHQGLIDGTPGFFNSTTNPS 2665 Query 412 SGSAAAGSGANPGLRSPGTSYPSFVN----SGSNDSGLRNTAVRE 452 SG +G G+ G+ + G F+N +G+ SGL N + Sbjct 2666 SGLLNSGEGSESGVGNYGVGNSGFLNFASVTGAGSSGLLNVGALQ 2710 Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 108/230 (47%), Positives = 135/230 (59%), Gaps = 22/230 (9%) Query 173 QVLRNLGIDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGL 232 QV N+G NG N+GFGN G N+G+ NIG+ N+GSGN G NIG GN G N+GL Sbjct 1917 QVPVNVGF--ANNGAGNVGFGNVGFSNVGSGNIGSFNVGSGNIGDYNIGPGNLGDYNIGL 1974 Query 233 GNLGDGNIGFGN--------------------TGSGNIGFGITGDHQMGFGGFNSGSGNI 272 GNLGD +IGFGN TGS NIG G+ GD Q+GFG NSG+GNI Sbjct 1975 GNLGDSSIGFGNAGDHNVGVANAGFNNFGFANTGSNNIGIGLNGDGQVGFGALNSGTGNI 2034 Query 273 GFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNA 332 G NSGT N+GLFNSG+GN GIGNSG N+GIG +G N GL +AG +NT NAG N+ Sbjct 2035 GLFNSGTDNIGLFNSGTGNFGIGNSGDYNTGIGNAGATNTGLLNAGLVNTGVGNAGNYNS 2094 Query 333 ALGSAAGSEAALVSSAGYATGGMSTAALSSGILASALGSTGGLQHGLANV 382 + + + Y TGG++ ++G L S +TG + G N Sbjct 2095 GGFNTGSTNTGSFNPGDYNTGGLNQGDYNTGYLNSGDYNTGFVNAGDVNT 2144 Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 102/215 (48%), Positives = 124/215 (58%), Gaps = 35/215 (16%) Query 187 QINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGD--------- 237 + NLG GN GSGN+G+ NIG N+GSGN G NIG N G N+GLGNLGD Sbjct 1061 RFNLGLGNIGSGNVGSGNIGGANVGSGNIGDYNIGPANLGDYNIGLGNLGDSSIGLANAG 1120 Query 238 -----------GNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFN 286 N GF NTG+ NIG G++GD Q+GFG NSG+GNIG NSGT N+GLFN Sbjct 1121 DHNLGVANAGFNNFGFANTGNNNIGIGLSGDGQVGFGALNSGTGNIGLFNSGTDNIGLFN 1180 Query 287 SGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVS 346 SG+GN GIGNSG N+GIG +G N GL +AG +NT NAG N Sbjct 1181 SGTGNFGIGNSGDYNTGIGNAGATNTGLLNAGLVNTGVGNAGNYN--------------- 1225 Query 347 SAGYATGGMSTAALSSGILASALGSTGGLQHGLAN 381 S G+ TG +T + +SG + + G GLAN Sbjct 1226 SGGFNTGSTNTGSFNSGDYNTGYLNPGNYNTGLAN 1260 Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/211 (47%), Positives = 124/211 (59%), Gaps = 20/211 (9%) Query 188 INLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGD---------- 237 NLG GN G GN+G+ N GN N+GS N G NIG GN G N+GLGNLGD Sbjct 1491 FNLGLGNIGFGNVGSANAGNFNVGSANIGDYNIGPGNLGDYNIGLGNLGDSSIGLANAGD 1550 Query 238 ----------GNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNS 287 N GF NTG+ NIG G++GD Q+G G NSG+GNIG NSGT N+GLFNS Sbjct 1551 HNLGVANAGFNNFGFANTGNNNIGIGLSGDGQVGIGALNSGTGNIGLFNSGTDNIGLFNS 1610 Query 288 GSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSS 347 G+GN GIGNSG N+GIG +G N GL +AG +NT NAG N+ +A + +S Sbjct 1611 GTGNFGIGNSGDYNTGIGNAGATNTGLLNAGLVNTGVGNAGNYNSGGLNAGHTNTGSFNS 1670 Query 348 AGYATGGMSTAALSSGILASALGSTGGLQHG 378 Y TG ++ ++G++ S +TG G Sbjct 1671 GDYNTGYLNPGNYNTGMVNSGDVNTGAFISG 1701 Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 96/211 (46%), Positives = 124/211 (59%), Gaps = 20/211 (9%) Query 188 INLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGD---------- 237 NLG GN G GN+G+ N+G+ N+G N G NIG GN G+ N+GLGNLGD Sbjct 637 FNLGLGNIGFGNVGSANVGSFNVGPANMGDYNIGPGNLGNYNVGLGNLGDSSVGLANAGD 696 Query 238 ----------GNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNS 287 N G NTGS NIG G++GD Q+GFG NSG+GNIG NSG N+GLFNS Sbjct 697 LNVGVANAGSNNFGLANTGSNNIGIGLSGDGQVGFGALNSGTGNIGLFNSGADNIGLFNS 756 Query 288 GSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSS 347 G+GN GIGNSG N+GIG +G N GL +AG +NT NAG N+ +A + +S Sbjct 757 GTGNFGIGNSGDYNTGIGNAGATNTGLLNAGLVNTGVSNAGNYNSGGFNAGHTNTGSFNS 816 Query 348 AGYATGGMSTAALSSGILASALGSTGGLQHG 378 Y TG ++ ++G++ S +TG G Sbjct 817 GDYNTGYLNPGNYNTGLVNSGDVNTGAFISG 847 Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 123/348 (36%), Positives = 161/348 (47%), Gaps = 87/348 (25%) Query 114 AANRGLMQLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQ 173 A N GL+ L ++ + QN AL A M+G + A A ++ Sbjct 1851 ADNSGLLNLAFGSSGY-QNVGALQSGIANLGN-------TMSGVYNTGLAVPAHVSGIGN 1902 Query 174 VLRNL-GIDIGKNGQI--NLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNL 230 + NL G+ G GQ+ N+GF N G+GN+G N+G +N+GSGN G+ N+GSGN G N+ Sbjct 1903 IGHNLAGLLRGTAGQVPVNVGFANNGAGNVGFGNVGFSNVGSGNIGSFNVGSGNIGDYNI 1962 Query 231 GLGNLGDGNIGFGNTGSGNIGFGITGDHQMG--------FGGFNSGSGNIGFGNSGTGNV 282 G GNLGD NIG GN G +IGFG GDH +G FG N+GS NIG G +G G V Sbjct 1963 GPGNLGDYNIGLGNLGDSSIGFGNAGDHNVGVANAGFNNFGFANTGSNNIGIGLNGDGQV 2022 Query 283 GL--FNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGS 340 G NSG+GNIG+ NSG+ N G+ SGT N G+G++G NT NAG N L Sbjct 2023 GFGALNSGTGNIGLFNSGTDNIGLFNSGTGNFGIGNSGDYNTGIGNAGATNTGL------ 2076 Query 341 EAALVSSAGYATGGMSTAALSSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPV 400 LN+GL NT V Sbjct 2077 ------------------------------------------LNAGLVNTGVG------- 2087 Query 401 GGLDSGNPNPGSGSAAAGSGANPGLRSPGTSYPSFVNSGSNDSGLRNT 448 ++GN N G G N G + G+ P N+G + G NT Sbjct 2088 ---NAGNYNSG--------GFNTGSTNTGSFNPGDYNTGGLNQGDYNT 2124 Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 109/312 (35%), Positives = 135/312 (44%), Gaps = 105/312 (33%) Query 186 GQINLGFGNTGSGNIGNN----------------------------------NIGNN--- 208 G +NL FG++G NIG+N Sbjct 1855 GLLNLAFGSSG-----YQNVGALQSGIANLGNTMSGVYNTGLAVPAHVSGIGNIGHNLAG 1909 Query 209 -----------NIGSGNTGTGNIG--------------------SGNTGSGNLGLGNLGD 237 N+G N G GN+G SGN G N+G GNLGD Sbjct 1910 LLRGTAGQVPVNVGFANNGAGNVGFGNVGFSNVGSGNIGSFNVGSGNIGDYNIGPGNLGD 1969 Query 238 GNIGFGNTGSGNIGFGITGDHQMG--------FGGFNSGSGNIGFG------------NS 277 NIG GN G +IGFG GDH +G FG N+GS NIG G NS Sbjct 1970 YNIGLGNLGDSSIGFGNAGDHNVGVANAGFNNFGFANTGSNNIGIGLNGDGQVGFGALNS 2029 Query 278 GTGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSA 337 GTGN+GLFNSG+ NIG+ NSG+ N GIG SG N G+G+AG+ NT NAG+ N +G+A Sbjct 2030 GTGNIGLFNSGTDNIGLFNSGTGNFGIGNSGDYNTGIGNAGATNTGLLNAGLVNTGVGNA 2089 Query 338 AGSEAALVSSAGYATGGMSTAALSSGILASALGSTGGLQHGLANV--LNSGLTNTPVAAP 395 Y +GG +T + ++G +TGGL G N LNSG NT Sbjct 2090 ----------GNYNSGGFNTGSTNTGSFNPGDYNTGGLNQGDYNTGYLNSGDYNTGFVNA 2139 Query 396 ASAPVGGLDSGN 407 G SGN Sbjct 2140 GDVNTGAFISGN 2151 Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 78/199 (40%), Positives = 103/199 (52%), Gaps = 17/199 (8%) Query 160 DASAAVAQLAPWQQVLRNLG---IDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTG 216 D + A L + L NLG I + G NLG N G N G N GNNNIG G +G Sbjct 1091 DYNIGPANLGDYNIGLGNLGDSSIGLANAGDHNLGVANAGFNNFGFANTGNNNIGIGLSG 1150 Query 217 TGNIGSG--NTGSGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGF 274 G +G G N+G+GN+GL N G NIG N+G+GN G G +GD+ N G Sbjct 1151 DGQVGFGALNSGTGNIGLFNSGTDNIGLFNSGTGNFGIGNSGDY------------NTGI 1198 Query 275 GNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAAL 334 GN+G N GL N+G N G+GN+G+ NSG +G+ N G ++G NT + N G N L Sbjct 1199 GNAGATNTGLLNAGLVNTGVGNAGNYNSGGFNTGSTNTGSFNSGDYNTGYLNPGNYNTGL 1258 Query 335 GSAAGSEAALVSSAGYATG 353 ++ S Y+ G Sbjct 1259 ANSGDVNTGAFISGDYSNG 1277 Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 78/212 (37%), Positives = 114/212 (54%), Gaps = 24/212 (11%) Query 175 LRNLGIDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGN 234 L N + +G G ++G N G N+G N G+NN G NTG+ NIG G +G G +G G Sbjct 674 LGNYNVGLGNLGDSSVGLANAGDLNVGVANAGSNNFGLANTGSNNIGIGLSGDGQVGFGA 733 Query 235 LGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGI 294 L N+G+GNIG FNSG+ NIG NSGTGN G+ NSG N GI Sbjct 734 L--------NSGTGNIGL------------FNSGADNIGLFNSGTGNFGIGNSGDYNTGI 773 Query 295 GNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGG 354 GN+G+ N+G+ +G +N G+ +AG+ N+ +NAG N ++ ++ Y TG Sbjct 774 GNAGATNTGLLNAGLVNTGVSNAGNYNSGGFNAGHTNTGSFNSGDYNTGYLNPGNYNTGL 833 Query 355 MSTAALSSGILASALGSTG----GLQHGLANV 382 +++ +++G S S G G GLA++ Sbjct 834 VNSGDVNTGAFISGDYSNGAFWRGDHQGLADI 865 Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 107/290 (37%), Positives = 142/290 (49%), Gaps = 46/290 (15%) Query 180 IDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSG--NTGTGNIGSGNTGSGNLGLGNLGD 237 + +G G N GF NTGS NIG G+ +G G N+GTGNIG N+G+ N+GL N G Sbjct 2477 VGVGNAGFNNFGFANTGSNNIGIGLSGDGQVGFGALNSGTGNIGLFNSGTDNIGLFNSGT 2536 Query 238 GNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNS 297 GNIG N+G+G+ G G NSG+ N G GN+G N GLFN+G N G+GN+ Sbjct 2537 GNIGLFNSGTGSFGIG------------NSGNYNTGIGNAGATNTGLFNTGLVNTGVGNA 2584 Query 298 GSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGM-- 355 G+ NSG +G+ N G ++G NT + N+G N L ++ S Y+ G Sbjct 2585 GNYNSGGFNTGSTNTGSFNSGDHNTGYLNSGDYNTGLANSGDVNTGAFISGNYSNGFFVD 2644 Query 356 ---------------STAALSSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAP- 399 ST SSG+L S GS G+ G V NSG N A + Sbjct 2645 GDHQGLIDGTPGFFNSTTNPSSGLLNSGEGSESGV--GNYGVGNSGFLNFASVTGAGSSG 2702 Query 400 ---VGGLDSGNPNPGSGSAAAGSGANPGLRSPGTSYPSFVNSGSNDSGLR 446 VG L SG N GS + G + G+ P+FV SG ++G R Sbjct 2703 LLNVGALQSGILNLGSTIS--------GFGNTGSVTPAFV-SGVANAGTR 2743 Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 76/181 (42%), Positives = 97/181 (54%), Gaps = 8/181 (4%) Query 160 DASAAVAQLAPWQQVLRNLG---IDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTG 216 D + L + L NLG I G G N+G N G N G N G+NNIG G G Sbjct 1959 DYNIGPGNLGDYNIGLGNLGDSSIGFGNAGDHNVGVANAGFNNFGFANTGSNNIGIGLNG 2018 Query 217 TGNIGSG--NTGSGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGF---GGFNSGSGN 271 G +G G N+G+GN+GL N G NIG N+G+GN G G +GD+ G G N+G N Sbjct 2019 DGQVGFGALNSGTGNIGLFNSGTDNIGLFNSGTGNFGIGNSGDYNTGIGNAGATNTGLLN 2078 Query 272 IGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQN 331 G N+G GN G +NSG N G N+GS N G +G +N G + G LN+ +N G N Sbjct 2079 AGLVNTGVGNAGNYNSGGFNTGSTNTGSFNPGDYNTGGLNQGDYNTGYLNSGDYNTGFVN 2138 Query 332 A 332 A Sbjct 2139 A 2139 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 100/291 (35%), Positives = 128/291 (44%), Gaps = 105/291 (36%) Query 195 TGSGNIGNNNIGNNNIGSGNTGTGNIGS--------GNTGSG--NLGLG----------- 233 +G GN G++ G N GSGN+G N+G+ G+T SG N GLG Sbjct 1415 SGFGNFGDHTSGLVNFGSGNSGAQNVGALQSGLANLGDTVSGAFNTGLGVPAHVSGVGNV 1474 Query 234 -----------------NLGDGNIGFGNTGSGN--------------------------- 249 NLG GNIGFGN GS N Sbjct 1475 GSELAGFFRDATGHAPFNLGLGNIGFGNVGSANAGNFNVGSANIGDYNIGPGNLGDYNIG 1534 Query 250 --------IGFGITGDHQMG--------FGGFNSGSGNIGFG------------NSGTGN 281 IG GDH +G FG N+G+ NIG G NSGTGN Sbjct 1535 LGNLGDSSIGLANAGDHNLGVANAGFNNFGFANTGNNNIGIGLSGDGQVGIGALNSGTGN 1594 Query 282 VGLFNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSE 341 +GLFNSG+ NIG+ NSG+ N GIG SG N G+G+AG+ NT NAG+ N +G+A Sbjct 1595 IGLFNSGTDNIGLFNSGTGNFGIGNSGDYNTGIGNAGATNTGLLNAGLVNTGVGNA---- 1650 Query 342 AALVSSAGYATGGMSTAALSSGILASALGSTGGLQHGLAN--VLNSGLTNT 390 Y +GG++ ++G S +TG L G N ++NSG NT Sbjct 1651 ------GNYNSGGLNAGHTNTGSFNSGDYNTGYLNPGNYNTGMVNSGDVNT 1695 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/155 (43%), Positives = 86/155 (56%), Gaps = 11/155 (7%) Query 176 RNLGIDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNL 235 N+GI + +GQ+ +G N+G+GNIG N G +NIG N+GTGN G GN+G N G+GN Sbjct 294 NNIGIGLSGDGQVGIGALNSGTGNIGLFNSGTDNIGLFNSGTGNFGIGNSGDYNTGIGNA 353 Query 236 GDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIG 295 G N G N G N G G G++ G GFN+G N G NSG N G N G+ N G+ Sbjct 354 GATNTGLLNAGLVNTGVGNAGNYNSG--GFNAGHTNTGSFNSGDYNTGYLNPGNYNTGLA 411 Query 296 NSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQ 330 NSG +N+G SG + G +FW Q Sbjct 412 NSGDVNTGAFISGNYSNG---------AFWRGDHQ 437 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 93/275 (34%), Positives = 121/275 (44%), Gaps = 101/275 (36%) Query 209 NIGSGNTGTGNIGS--------GNTGSG--NLGLG------------------------- 233 N+GSG++G N+G+ G+T SG N GLG Sbjct 575 NVGSGSSGVQNLGALQSGLANLGDTVSGAFNTGLGVPAHVSGVGNVGSELAGFFRDAAGQ 634 Query 234 ---NLGDGNIGFGNTGSGNIG-FGI----TGDHQMG------------------------ 261 NLG GNIGFGN GS N+G F + GD+ +G Sbjct 635 APFNLGLGNIGFGNVGSANVGSFNVGPANMGDYNIGPGNLGNYNVGLGNLGDSSVGLANA 694 Query 262 --------------FGGFNSGSGNIGFG------------NSGTGNVGLFNSGSGNIGIG 295 FG N+GS NIG G NSGTGN+GLFNSG+ NIG+ Sbjct 695 GDLNVGVANAGSNNFGLANTGSNNIGIGLSGDGQVGFGALNSGTGNIGLFNSGADNIGLF 754 Query 296 NSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGM 355 NSG+ N GIG SG N G+G+AG+ NT NAG+ N + S A +S G+ G Sbjct 755 NSGTGNFGIGNSGDYNTGIGNAGATNTGLLNAGLVNTGV-----SNAGNYNSGGFNAGHT 809 Query 356 STAALSSGILASALGSTGGLQHGLANVLNSGLTNT 390 +T + +SG + + G GL +NSG NT Sbjct 810 NTGSFNSGDYNTGYLNPGNYNTGL---VNSGDVNT 841 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 78/233 (34%), Positives = 99/233 (43%), Gaps = 80/233 (34%) Query 176 RNLGIDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNL 235 N+GI + +GQ+ G N+G+GNIG N G +NIG N+GTGNIG N+G+G+ G+GN Sbjct 2495 NNIGIGLSGDGQVGFGALNSGTGNIGLFNSGTDNIGLFNSGTGNIGLFNSGTGSFGIGNS 2554 Query 236 GDGNIGFGNTGSGNIGFGITGDHQMGFGG------------------FNSGSGNIGFGNS 277 G+ N G GN G+ N G TG G G FNSG N G+ NS Sbjct 2555 GNYNTGIGNAGATNTGLFNTGLVNTGVGNAGNYNSGGFNTGSTNTGSFNSGDHNTGYLNS 2614 Query 278 GTGNVGLFNSGS------------------------------------------------ 289 G N GL NSG Sbjct 2615 GDYNTGLANSGDVNTGAFISGNYSNGFFVDGDHQGLIDGTPGFFNSTTNPSSGLLNSGEG 2674 Query 290 -----GNIGIGNSGSLN----SGIGTSGTINAGLGSAGSLN-----TSFWNAG 328 GN G+GNSG LN +G G+SG +N G +G LN + F N G Sbjct 2675 SESGVGNYGVGNSGFLNFASVTGAGSSGLLNVGALQSGILNLGSTISGFGNTG 2727 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 84/283 (30%), Positives = 118/283 (42%), Gaps = 64/283 (22%) Query 234 NLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNI--------------------G 273 NLG N+G N GS NIG + GG N GS NI G Sbjct 2386 NLGFANLGIANLGSANIG-------DLNLGGANFGSANIGSGNIGFGNVGGGNVGSLNLG 2438 Query 274 FGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAA 333 FGN G N+G N G NIG+GN G N G G +G N G+G+AG N F N G N Sbjct 2439 FGNLGDHNIGPGNLGDYNIGLGNLGDSNVGFGNAGDHNVGVGNAGFNNFGFANTGSNNIG 2498 Query 334 LGSAAGSEA---ALVSSAG--------------YATGGMSTAALSSGILASALGSTGGLQ 376 +G + + AL S G + +G + +SG + +G++G Sbjct 2499 IGLSGDGQVGFGALNSGTGNIGLFNSGTDNIGLFNSGTGNIGLFNSGTGSFGIGNSGNYN 2558 Query 377 HGLAN-------VLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGLRSPG 429 G+ N + N+GL NT V + GG ++G+ N GS N G + G Sbjct 2559 TGIGNAGATNTGLFNTGLVNTGVGNAGNYNSGGFNTGSTNTGS--------FNSGDHNTG 2610 Query 430 TSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRE 472 ++NSG ++GL N+ SG + F+ D + Sbjct 2611 -----YLNSGDYNTGLANSGDVNTGAFISGNYSNGFFVDGDHQ 2648 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 95/300 (32%), Positives = 137/300 (46%), Gaps = 36/300 (12%) Query 191 GFGNTGSGNI-GNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNIGFGNTG--- 246 GF N+G G++ G N G++ G N G+GN G+ N G+ GL NLGD G NTG Sbjct 1405 GFFNSGDGSVSGFGNFGDHTSGLVNFGSGNSGAQNVGALQSGLANLGDTVSGAFNTGLGV 1464 Query 247 ------SGNIGFGITGDHQ--MGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSG 298 GN+G + G + G FN G GNIGFGN G+ N G FN GS NIG Sbjct 1465 PAHVSGVGNVGSELAGFFRDATGHAPFNLGLGNIGFGNVGSANAGNFNVGSANIG----- 1519 Query 299 SLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTA 358 N G G G N GLG+ G + NAG N + +A ++ G+A G + Sbjct 1520 DYNIGPGNLGDYNIGLGNLGDSSIGLANAGDHNLGVANAG------FNNFGFANTGNNNI 1573 Query 359 ALSSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAG 418 + G +G Q G+ LNSG N + + +G +SG N G G++ Sbjct 1574 GI---------GLSGDGQVGIG-ALNSGTGNIGLFNSGTDNIGLFNSGTGNFGIGNSGD- 1622 Query 419 SGANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESAYASP 478 N G+ + G + +N+G ++G+ N +G + + S D + Y +P Sbjct 1623 --YNTGIGNAGATNTGLLNAGLVNTGVGNAGNYNSGGLNAGHTNTGSFNSGDYNTGYLNP 1680 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 72/242 (30%), Positives = 106/242 (44%), Gaps = 37/242 (15%) Query 266 NSGSGNIGFG-----NSGTGNVGLFNSGSGNIGI-----GNSGSLNSGIGTSGTINAGLG 315 N+G+GN+GFG N G+GN+G FN GSGNIG GN G N G+G G + G G Sbjct 1926 NNGAGNVGFGNVGFSNVGSGNIGSFNVGSGNIGDYNIGPGNLGDYNIGLGNLGDSSIGFG 1985 Query 316 SAGSLNTSFWNAGMQNAALGSAAGSE-------------AALVSSAG----YATGGMSTA 358 +AG N NAG N + + AL S G + +G + Sbjct 1986 NAGDHNVGVANAGFNNFGFANTGSNNIGIGLNGDGQVGFGALNSGTGNIGLFNSGTDNIG 2045 Query 359 ALSSGILASALGSTGGLQHGLAN-------VLNSGLTNTPVAAPASAPVGGLDSGNPNPG 411 +SG +G++G G+ N +LN+GL NT V + GG ++G+ N G Sbjct 2046 LFNSGTGNFGIGNSGDYNTGIGNAGATNTGLLNAGLVNTGVGNAGNYNSGGFNTGSTNTG 2105 Query 412 SGSAAAGSGANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDR 471 S + N G + G ++NSG ++G N SG + F+ D Sbjct 2106 SFNPGD---YNTGGLNQGDYNTGYLNSGDYNTGFVNAGDVNTGAFISGNYSNGFFARGDY 2162 Query 472 ES 473 ++ Sbjct 2163 QN 2164 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 92/299 (31%), Positives = 124/299 (42%), Gaps = 69/299 (23%) Query 191 GFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLG-----LGNLGDGNIGFGNT 245 GF NTG G++ G N + +G N+GSG++G NLG L NLGD G NT Sbjct 551 GFFNTGDGSVS----GFGNFAARTSGFLNVGSGSSGVQNLGALQSGLANLGDTVSGAFNT 606 Query 246 G---------SGNIGFGITGDHQMGFGG--FNSGSGNIGFGNSGTGNVGLFNSG-----S 289 G GN+G + G + G FN G GNIGFGN G+ NVG FN G Sbjct 607 GLGVPAHVSGVGNVGSELAGFFRDAAGQAPFNLGLGNIGFGNVGSANVGSFNVGPANMGD 666 Query 290 GNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAG 349 NIG GN G+ N G+G G + GL +AG LN NAG N L + + + Sbjct 667 YNIGPGNLGNYNVGLGNLGDSSVGLANAGDLNVGVANAGSNNFGLANTGSNNIGI----- 721 Query 350 YATGGMSTAALSSGILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPN 409 G +G Q G LNSG N + + +G +SG N Sbjct 722 --------------------GLSGDGQVGFG-ALNSGTGNIGLFNSGADNIGLFNSGTGN 760 Query 410 PGSGSAAAGSGANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPS 468 G G++ N+G ++G NT + +G+ + Y S Sbjct 761 FGIGNSGD------------------YNTGIGNAGATNTGLLNAGLVNTGVSNAGNYNS 801 >gi|289442157|ref|ZP_06431901.1| predicted protein [Mycobacterium tuberculosis T46] gi|289415076|gb|EFD12316.1| predicted protein [Mycobacterium tuberculosis T46] Length=649 Score = 283 bits (725), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 236/563 (42%), Positives = 294/563 (53%), Gaps = 117/563 (20%) Query 9 LPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPSAAAM 68 +PPE NS M+ G GS PL+AAA AW LAEEL A+ +S GSVTSEL GAW GP++AAM Sbjct 1 MPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPASAAM 60 Query 69 MAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLAATNW 128 A Y +WL+ A AQAE AA QA A A AFE ALA V PAVV ANR LLA +N Sbjct 61 ANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAVSNV 120 Query 129 FGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDIGKNGQI 188 FGQNAPA+ +E+ YEQMWA DVA MAGYH +SAA AQLA WQ L N+ + +G G + Sbjct 121 FGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGVGNIGNL 180 Query 189 NLGFGNTG---------------------------SGNIGNNNIGNNNIGSGNTGTG--- 218 N+G GNTG S N+G+ NIGN N+GSGN G Sbjct 181 NVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNGNVGIGP 240 Query 219 ---NIGSGNTGSGNLGLGNLGDG----------NIG------------------------ 241 N+GSGN G+ N+G GN GD NIG Sbjct 241 SSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIG 300 Query 242 ------------------FGNTGSGNIGFGITGDH------------------------- 258 GN G GN+GFG +G + Sbjct 301 NGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNSGSYNFGFGNTGNNNIGIG 360 Query 259 -----QMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTINAG 313 Q+GFGG NSGSGNIGFGNSGTGN+G FNSGSGN G+GNSG N+G+ SG IN G Sbjct 361 LTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTG 420 Query 314 LGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILASALGSTG 373 G++G +NT F NA N G++ + + ++ + TG + +++G S ++G Sbjct 421 FGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSG 480 Query 374 GLQHGLAN--VLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGLRSPGTS 431 G AN LNSGLTNT A + GG ++GN N G G+ G G N G + G+ Sbjct 481 SFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSG 540 Query 432 YPSFVNSGSNDSGLRNTAVREPS 454 F NSG +SG +N + S Sbjct 541 NSGFNNSGKGNSGAQNVGNLQIS 563 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 69/178 (39%), Positives = 86/178 (49%), Gaps = 31/178 (17%) Query 188 INLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNIGFGNTGS 247 +N GFGN+G N G N G+ N G+ N G N GS N+G+ N G N GD N GF N+G Sbjct 437 VNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGL 496 Query 248 GNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTG---NVGLFNSGSGNIGIGNSGSLNSG- 303 N GF +G+ G GFN+G+ N GFGN+ G N G N+GSGN G NSG NSG Sbjct 497 TNTGFANSGNINTG--GFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGKGNSGA 554 Query 304 --IG-----------------------TSGTINAGLGSAGSLNTSFWNAGMQNAALGS 336 +G TSG N G G + F N G + G+ Sbjct 555 QNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGN 612 >gi|408783278|ref|ZP_11195051.1| PPE family protein, partial [Mycobacterium kansasii ATCC 12478] Length=578 Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 194/410 (48%), Positives = 248/410 (61%), Gaps = 35/410 (8%) Query 6 FAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPSA 65 F+ LPPEINSA +FAG G+ PL+AAAT WG LAEEL ++ S GSVT+ L G+W+GP++ Sbjct 3 FSVLPPEINSARIFAGAGADPLLAAATTWGGLAEELESAATSFGSVTAGLVGGSWVGPAS 62 Query 66 AAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLAA 125 AM+A A Y WLS +A QA QAA QA A+ FEA AA VQP +VAANRG + L Sbjct 63 EAMLAAAAPYAGWLSASATQARQAATQAGALLAEFEAVQAAMVQPIMVAANRGDLVSLVL 122 Query 126 TNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNL-GIDIGK 184 +N FGQNAPA+ VEAAYE MWA DVAAM+ YH ASA ++ L P+ + L+ L G+ Sbjct 123 SNLFGQNAPAIASVEAAYEAMWAQDVAAMSAYHAGASAVISALTPFTKPLQGLAGLPDHL 182 Query 185 NGQINLGFGNT-----------------------------GSGNIGNNNIGNNNIGSGNT 215 T GS N G N+G+NN G GN Sbjct 183 ASAAAAAAAGTPFSLGFGNLGGGNVGNGNLGAGNFGNGNLGSHNFGFGNLGSNNFGPGNL 242 Query 216 GTGNIGSGNTGSGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFG 275 G+GNIG GN GS N+GL N G N G+ NTGS NIG G+TG Q+GFG NSG G +G Sbjct 243 GSGNIGFGNAGSFNVGLANTGSNNFGYANTGSNNIGIGLTGTGQIGFGSLNSGLGTLGLL 302 Query 276 NSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAA-L 334 NSGTGNVGLFNSG+GN+GIGNSGS N G SG N G+G++G NT +N G N Sbjct 303 NSGTGNVGLFNSGTGNVGIGNSGSGNRGFFNSGLGNFGVGNSGDYNTGLFNPGDVNTGNF 362 Query 335 GSAAGSEAAL----VSSAGYATGGMSTAALSSGILASALGSTGGLQHGLA 380 S + + +L V++ + TG ++T +SG + + L + G + +G+A Sbjct 363 NSGSFNTGSLNSGDVNTGSFNTGNINTGFFNSGDVNTGLFNAGDMNNGVA 412 Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust. Identities = 63/193 (33%), Positives = 82/193 (43%), Gaps = 45/193 (23%) Query 258 HQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSA 317 H GFG N GS N G GN G+GN+G N+GS N+G+ N+GS N G +G+ N G+G Sbjct 225 HNFGFG--NLGSNNFGPGNLGSGNIGFGNAGSFNVGLANTGSNNFGYANTGSNNIGIGLT 282 Query 318 GSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILASALGSTGGLQH 377 G T + G L S LG+ G L Sbjct 283 G--------------------------------------TGQIGFGSLNSGLGTLGLLNS 304 Query 378 GLANV--LNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGLRSPGTSYPSF 435 G NV NSG N + S G +SG N G G++ N GL +PG Sbjct 305 GTGNVGLFNSGTGNVGIGNSGSGNRGFFNSGLGNFGVGNSGD---YNTGLFNPGDVNTGN 361 Query 436 VNSGSNDSGLRNT 448 NSGS ++G N+ Sbjct 362 FNSGSFNTGSLNS 374 >gi|408783409|ref|ZP_11195182.1| PPE family protein, partial [Mycobacterium kansasii ATCC 12478] Length=893 Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 224/502 (45%), Positives = 287/502 (58%), Gaps = 63/502 (12%) Query 5 HFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPS 64 +FA LPPEINSA M+ G G GP++ AA AW LA EL ++ S SVTS L W GP+ Sbjct 2 NFAVLPPEINSARMYLGAGLGPMLNAAVAWDGLAAELGSAATSFSSVTSGLAGSFWQGPA 61 Query 65 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLA 124 + AM A YL WL+ AA+QAEQAA +A A AFEAALAATV PA+++ANR + L Sbjct 62 STAMADAAVPYLGWLNAAASQAEQAALRARLTAAAFEAALAATVHPAIISANRTQLVSLV 121 Query 125 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVL--------- 175 +N GQNA A+ D E YEQMWA DVAAM YH ASAA++ L P+ L Sbjct 122 FSNLLGQNATAIADAEIQYEQMWARDVAAMLDYHARASAALSTLTPFPPTLARLVNPATV 181 Query 176 --------------RNLGI-DIGKN-------GQINLGFGNTGSGNIGNNNIGNNNIGSG 213 RN+G+ ++G+ G N G GNTGS NIG+ NIG NNIG G Sbjct 182 NAAAAAAQDIVVPFRNVGLANVGRGNVGNANIGDFNFGSGNTGSSNIGSGNIGTNNIGFG 241 Query 214 NTG------TGNIGSGNTGSGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNS 267 N+G NIG GNTG+GN+G+GN GD NIGFGNTG+GN G G+ GD++ GFGG NS Sbjct 242 NSGPMLTAALRNIGFGNTGNGNIGIGNTGDNNIGFGNTGTGNRGIGLNGDNRWGFGGMNS 301 Query 268 GSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGS-LNSGIGTSGTINAGLGSAGSLNTSF-- 324 G+GN+GF NSGTGNVG+ NSGSGN GIGNSG+ N+GIG SG +N G ++G +NT Sbjct 302 GTGNVGFFNSGTGNVGIGNSGSGNWGIGNSGNGYNTGIGNSGDVNTGFFNSGVVNTGIAN 361 Query 325 --------WNAGMQNAALGSAAGSEAALVSSAGYAT-----GGMSTAALSSGILASALGS 371 WN+G N + ++ Y T G + T A SG ++ L Sbjct 362 SGGNNSGSWNSGSFNTGAFNVGDYNTGWLNYGNYNTGIANAGNVDTGAFISGSYSNGLFW 421 Query 372 TGGLQHG------LANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPGL 425 G Q G ++ +SG N+ A + G +SG N G +++ GS N G+ Sbjct 422 RGDYQGGGPGIGNTTSIPSSGFFNSGTGAAS----GFFNSGANNSGFVNSSTGSQGNTGI 477 Query 426 RSPGTSYPSFVNSGSNDSGLRN 447 + G VN+G+ SGL N Sbjct 478 GNYGALLSGLVNTGNTMSGLFN 499 Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 121/313 (39%), Positives = 164/313 (53%), Gaps = 28/313 (8%) Query 183 GKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNIGF 242 G G N GFGN GS NIG+ N+G+ NIG N G NIG N G N G N G+ N+GF Sbjct 576 GNFGFFNAGFGNLGSYNIGSANLGSYNIGPANFGEFNIGLWNAGDSNHGFANTGNNNVGF 635 Query 243 GNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNS 302 GNTGS N+G G+TG Q+GFG NSG+ NIG NSGT N+GLFNSG+GN+G+GNSG+ + Sbjct 636 GNTGSNNVGVGLTGTGQVGFGALNSGANNIGLFNSGTNNIGLFNSGTGNVGVGNSGTGDW 695 Query 303 GIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSS 362 GIG GT N G+G+ GS NT +NAG+ N + TG +T A + Sbjct 696 GIGNPGTGNTGIGNTGSYNTGLFNAGIINTGFAN---------------TGDYNTGAANR 740 Query 363 GILASALGSTGGLQHGLANVLNSGLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGA- 421 G + + GG G + N G NT V + G ++SG+ N G +A G Sbjct 741 GSFNTGWYNPGGYNTGWS---NPGDYNTGVFNTGNVNTGAVNSGDFNNGFFISADNQGQI 797 Query 422 --NPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKS---NFYPSPDR--ESA 474 N + +P + P + + +E + PG PK+ NFY P S+ Sbjct 798 ALNLNITTP--TVPIDFEIRIPIYKIYDLGGQEYTIPGFYYPKTAFGNFYLGPMTIPTSS 855 Query 475 YASPRIGQPVGSE 487 ++P + GS+ Sbjct 856 ISAPHVTLTTGSQ 868 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 94/302 (32%), Positives = 132/302 (44%), Gaps = 45/302 (14%) Query 187 QINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNIGFGNTG 246 +N+GF N+G N G+ NIG+ N GSGN +GS N GSGN+G NLG GN GF Sbjct 530 NVNVGFANSGRLNFGDANIGSFNFGSGN-----VGSANFGSGNVGDTNLGSGNFGF---- 580 Query 247 SGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGT 306 FN+G FGN G+ N+G N GS NIG N G N G+ Sbjct 581 ------------------FNAG-----FGNLGSYNIGSANLGSYNIGPANFGEFNIGLWN 617 Query 307 SGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAAL--VSSAGYATGGMSTAALSSGI 364 +G N G + G+ N F N G N +G + ++S G ++ + G+ Sbjct 618 AGDSNHGFANTGNNNVGFGNTGSNNVGVGLTGTGQVGFGALNSGANNIGLFNSGTNNIGL 677 Query 365 LASALGSTGGLQHGLAN--VLNSGLTNTPVAAPASAPVGGLDSGNPNPG--------SGS 414 S G+ G G + + N G NT + S G ++G N G +G+ Sbjct 678 FNSGTGNVGVGNSGTGDWGIGNPGTGNTGIGNTGSYNTGLFNAGIINTGFANTGDYNTGA 737 Query 415 AAAGSGANPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPSTPGSGIPKSNFYPSPDRESA 474 A GS N G +PG + N G ++G+ NT SG + F+ S D + Sbjct 738 ANRGS-FNTGWYNPGGYNTGWSNPGDYNTGVFNTGNVNTGAVNSGDFNNGFFISADNQGQ 796 Query 475 YA 476 A Sbjct 797 IA 798 >gi|408784271|ref|ZP_11196044.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=591 Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 231/536 (44%), Positives = 289/536 (54%), Gaps = 92/536 (17%) Query 1 VTSPHFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAW 60 + + +F LPPEINSA ++ G GSGP++AAA AW LA EL ++ S GSVTS LT W Sbjct 1 MVAMNFVILPPEINSARVYLGAGSGPMLAAAAAWDGLAGELGSAAGSFGSVTSGLTGAVW 60 Query 61 LGPSAAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLM 120 GP+A AM+ A Y+ WLS AAA A+ AA QA +AFEAA+AATV P VAANR + Sbjct 61 QGPAATAMVEAAAPYVGWLSAAAAHAQGAAGQARTAVSAFEAAVAATVHPVAVAANRNQL 120 Query 121 QLLAATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQ------- 173 L +N FGQNAPA+ E AYEQMWA DVAAM GYH +A+A VAQLAP Q Sbjct 121 VSLVVSNLFGQNAPAIAAAETAYEQMWAQDVAAMVGYHGEAAAVVAQLAPMQSGLQQALQ 180 Query 174 ----VLRNLGI------------------DIGKNGQINLGFGNTGSGNIGNNNIGNNNIG 211 +L NLG+ G NG N+G GN G+ N+GN N GN+N+G Sbjct 181 TLPGMLANLGVGNAGSGNLGGGNHGDNNLGSGNNGSHNVGSGNAGNTNLGNGNSGNSNVG 240 Query 212 SGNTGTGNIGSG-----NTGSGNLGL-------------------------GNLGDGNIG 241 +GN G N GSG NTG+GN+G GN GD N+G Sbjct 241 NGNRGDQNFGSGNSGGTNTGNGNIGTGNVGSGNLGNGNLGNGNLGNSNVGSGNRGDNNMG 300 Query 242 FGNTGSGN--------------------IGFGITGDHQMGFGGFNSGSGNIGFGNSGTGN 281 FGN GS N IGFG+TGD+Q+GFG NSGSGNIGFGNSG+GN Sbjct 301 FGNRGSSNIGVSNTGNHDFGFGNTGNNDIGFGLTGDNQVGFGALNSGSGNIGFGNSGSGN 360 Query 282 VGLFNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSE 341 VG FNSG+GN+G+ NSG + G SG+ N GL ++G NT F NAG + L +A + Sbjct 361 VGFFNSGTGNVGLFNSGGHSFGAENSGSFNTGLTNSGQGNTGFVNAGFNSLGLANAGANN 420 Query 342 AALVSSAGYATGGMSTAALSSGILASALGSTGGLQHGLANV--LNSGLTNTPVAAPASAP 399 + + + + G S +TG G N N+G NT A ++ Sbjct 421 MGVFNG----------GSQNFGFGNSGFQNTGSWNAGSINTGDFNAGSINTGWANSGASN 470 Query 400 VGGLDSGNPNPGSGSAAAGSGA-NPGLRSPGTSYPSFVNSGSNDSGLRNTAVREPS 454 GG DSG+ N G GS GA N G + G F NSG + SG +NT + S Sbjct 471 TGGFDSGSLNTGFGSMLTPVGAKNSGFGTTGLDSSGFFNSGGDTSGFQNTGLAFES 526 Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust. Identities = 65/177 (37%), Positives = 84/177 (48%), Gaps = 30/177 (16%) Query 176 RNLGIDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNL 235 N+G+ G G N GFGN+G N G+ N G+ N G N G+ N G N+G+ N G + Sbjct 419 NNMGVFNG--GSQNFGFGNSGFQNTGSWNAGSINTGDFNAGSINTGWANSGASNTGGFDS 476 Query 236 GDGNIGFGN----TGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGN---------- 281 G N GFG+ G+ N GFG TG GF FNSG GF N+G Sbjct 477 GSLNTGFGSMLTPVGAKNSGFGTTGLDSSGF--FNSGGDTSGFQNTGLAFESGFHNSGNG 534 Query 282 ------------VGLFNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWN 326 G+ N+G NIGI NS NSGIG SG ++G + + F+N Sbjct 535 NNAGINNTGSFLAGIGNTGFDNIGIANSNVFNSGIGNSGNDDSGFFNKTDAQSGFFN 591 >gi|31793109|ref|NP_855602.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|31618700|emb|CAD94653.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=1910 Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 192/399 (49%), Positives = 254/399 (64%), Gaps = 35/399 (8%) Query 5 HFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPS 64 +F+ LPPEINSAL+F G GS P+ AAA AW +LA EL ++ AS SVTS L +WLGPS Sbjct 2 NFSTLPPEINSALIFGGAGSEPMSAAAVAWDQLAMELASAAASFNSVTSGLVGESWLGPS 61 Query 65 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLA 124 +AAM A YL WL+ AAAQA+++A QA A+ FEA AA VQPA+VAANR + L Sbjct 62 SAAMAAAVAPYLGWLAAAAAQAQRSATQAAALVAEFEAVRAAMVQPALVAANRSDLVSLV 121 Query 125 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDI-- 182 +N+FGQNAPA+ +EAAYEQMWA+DV+ M+ YH ASA + L P+ +NL D+ Sbjct 122 FSNFFGQNAPAIAAIEAAYEQMWAIDVSVMSAYHAGASAVASALTPFTAPPQNL-TDLPA 180 Query 183 ------------------GKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGN 224 G ++LG N+G G +G N+G N+GS N G N G GN Sbjct 181 QLAAAPAAVVTAAITSSKGVLANLSLGLANSGFGQMGAANLGILNLGSLNPGGNNFGLGN 240 Query 225 TGSGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGL 284 GS N+GLGN G+GNIGFGNTG+GNIGFG+TGD+Q GFGG+NSG+GNIG NSGTGN+G+ Sbjct 241 VGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGI 300 Query 285 FNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAAL 344 N+G+GN GIGNSG+ + N G+G+ G NT F+NAG+ N +G+ Sbjct 301 GNTGTGNFGIGNSGT---------SYNTGIGNTGQANTGFFNAGIANTGIGNTGNYNTGS 351 Query 345 VSSAGYATGGMSTAALSSGI-----LASALGSTGGLQHG 378 + + TG +T + ++G L + +G+TG + G Sbjct 352 FNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGNVNTG 390 Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 89/148 (61%), Positives = 107/148 (73%), Gaps = 6/148 (4%) Query 190 LGFGNTGSGNIGNNNIGNNNIGSGNTGTG------NIGSGNTGSGNLGLGNLGDGNIGFG 243 GFGN GS N G N+G+NN+G NTG G NIG GN G N G N+G+GNIGFG Sbjct 1162 FGFGNIGSNNFGFGNVGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFG 1221 Query 244 NTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSG 303 NTG+GNIG G+TGD+Q+GFG NSGSGNIGF NSG GN+G FNSG+GN+GIGNSG+ N+G Sbjct 1222 NTGTGNIGIGLTGDNQVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTG 1281 Query 304 IGTSGTINAGLGSAGSLNTSFWNAGMQN 331 +G G N GL + G++NT NAG N Sbjct 1282 LGNVGNANTGLFNTGNVNTGIGNAGSYN 1309 Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 80/186 (44%), Positives = 103/186 (56%), Gaps = 18/186 (9%) Query 171 WQQVLRNLGI-DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSG--NTGS 227 + L N+G +IG N N GF N G+GNIG N G NIG G TG +G G N+GS Sbjct 1191 LTEALHNIGFGNIGGN---NYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGS 1247 Query 228 GNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNS 287 GN+G N G+GNIGF N+G+GN+G G NSG+ N G GN G N GLFN+ Sbjct 1248 GNIGFFNSGNGNIGFFNSGNGNVGIG------------NSGNYNTGLGNVGNANTGLFNT 1295 Query 288 GSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSS 347 G+ N GIGN+GS N+G +G N G + G+ NT + N G N G+ + S Sbjct 1296 GNVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1355 Query 348 AGYATG 353 Y+ G Sbjct 1356 GSYSNG 1361 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 62/152 (41%), Positives = 78/152 (52%), Gaps = 18/152 (11%) Query 177 NLGIDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLG 236 N+GI + + Q+ G N+GSGNIG N GN NIG N+G GN+G GN+G+ N GLGN+G Sbjct 1227 NIGIGLTGDNQVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVG 1286 Query 237 DGNIGFGNTGSGNIGFGITGDHQMG------------------FGGFNSGSGNIGFGNSG 278 + N G NTG+ N G G G + G G N G N G+GN G Sbjct 1287 NANTGLFNTGNVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIG 1346 Query 279 TGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTI 310 N G SGS + GI G IG S T+ Sbjct 1347 DLNTGALISGSYSNGILWRGDYQGLIGYSDTL 1378 Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust. Identities = 56/145 (39%), Positives = 68/145 (47%), Gaps = 28/145 (19%) Query 209 NIGSGNTGTGNIGSGNTG-SGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFG--GF 265 N+GSG +G NI +GN G SG L +G L G + FGNT SG + +G F Sbjct 1043 NVGSGGSGFWNI-AGNLGNSGFLNVGPLTSGILNFGNTVSG-----LYNTSTLGLATSAF 1096 Query 266 NSGSG-------------------NIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGT 306 +SG G N GF N GT N+G N G N+G GN GS N G G Sbjct 1097 HSGVGNTDSQLAGFMRNAAGGTLFNFGFANDGTLNLGNANLGDYNVGSGNVGSYNFGSGN 1156 Query 307 SGTINAGLGSAGSLNTSFWNAGMQN 331 G + G G+ GS N F N G N Sbjct 1157 IGNGSFGFGNIGSNNFGFGNVGSNN 1181 >gi|121637822|ref|YP_978045.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990306|ref|YP_002644993.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|378771665|ref|YP_005171398.1| PPE family protein [Mycobacterium bovis BCG str. Mexico] gi|121493469|emb|CAL71942.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773419|dbj|BAH26225.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601849|emb|CCC64523.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ] gi|356593986|gb|AET19215.1| PPE family protein [Mycobacterium bovis BCG str. Mexico] Length=1835 Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 192/399 (49%), Positives = 254/399 (64%), Gaps = 35/399 (8%) Query 5 HFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPS 64 +F+ LPPEINSAL+F G GS P+ AAA AW +LA EL ++ AS SVTS L +WLGPS Sbjct 2 NFSTLPPEINSALIFGGAGSEPMSAAAVAWDQLAMELASAAASFNSVTSGLVGESWLGPS 61 Query 65 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLA 124 +AAM A YL WL+ AAAQA+++A QA A+ FEA AA VQPA+VAANR + L Sbjct 62 SAAMAAAVAPYLGWLAAAAAQAQRSATQAAALVAEFEAVRAAMVQPALVAANRSDLVSLV 121 Query 125 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDI-- 182 +N+FGQNAPA+ +EAAYEQMWA+DV+ M+ YH ASA + L P+ +NL D+ Sbjct 122 FSNFFGQNAPAIAAIEAAYEQMWAIDVSVMSAYHAGASAVASALTPFTAPPQNL-TDLPA 180 Query 183 ------------------GKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGN 224 G ++LG N+G G +G N+G N+GS N G N G GN Sbjct 181 QLAAAPAAVVTAAITSSKGVLANLSLGLANSGFGQMGAANLGILNLGSLNPGGNNFGLGN 240 Query 225 TGSGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGL 284 GS N+GLGN G+GNIGFGNTG+GNIGFG+TGD+Q GFGG+NSG+GNIG NSGTGN+G+ Sbjct 241 VGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGI 300 Query 285 FNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAAL 344 N+G+GN GIGNSG+ + N G+G+ G NT F+NAG+ N +G+ Sbjct 301 GNTGTGNFGIGNSGT---------SYNTGIGNTGQANTGFFNAGIANTGIGNTGNYNTGS 351 Query 345 VSSAGYATGGMSTAALSSGI-----LASALGSTGGLQHG 378 + + TG +T + ++G L + +G+TG + G Sbjct 352 FNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGNVNTG 390 Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 89/148 (61%), Positives = 107/148 (73%), Gaps = 6/148 (4%) Query 190 LGFGNTGSGNIGNNNIGNNNIGSGNTGTG------NIGSGNTGSGNLGLGNLGDGNIGFG 243 GFGN GS N G N+G+NN+G NTG G NIG GN G N G N+G+GNIGFG Sbjct 1087 FGFGNIGSNNFGFGNVGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFG 1146 Query 244 NTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSG 303 NTG+GNIG G+TGD+Q+GFG NSGSGNIGF NSG GN+G FNSG+GN+GIGNSG+ N+G Sbjct 1147 NTGTGNIGIGLTGDNQVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTG 1206 Query 304 IGTSGTINAGLGSAGSLNTSFWNAGMQN 331 +G G N GL + G++NT NAG N Sbjct 1207 LGNVGNANTGLFNTGNVNTGIGNAGSYN 1234 Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 80/186 (44%), Positives = 103/186 (56%), Gaps = 18/186 (9%) Query 171 WQQVLRNLGI-DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSG--NTGS 227 + L N+G +IG N N GF N G+GNIG N G NIG G TG +G G N+GS Sbjct 1116 LTEALHNIGFGNIGGN---NYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGS 1172 Query 228 GNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNS 287 GN+G N G+GNIGF N+G+GN+G G NSG+ N G GN G N GLFN+ Sbjct 1173 GNIGFFNSGNGNIGFFNSGNGNVGIG------------NSGNYNTGLGNVGNANTGLFNT 1220 Query 288 GSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSS 347 G+ N GIGN+GS N+G +G N G + G+ NT + N G N G+ + S Sbjct 1221 GNVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1280 Query 348 AGYATG 353 Y+ G Sbjct 1281 GSYSNG 1286 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 62/152 (41%), Positives = 78/152 (52%), Gaps = 18/152 (11%) Query 177 NLGIDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLG 236 N+GI + + Q+ G N+GSGNIG N GN NIG N+G GN+G GN+G+ N GLGN+G Sbjct 1152 NIGIGLTGDNQVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVG 1211 Query 237 DGNIGFGNTGSGNIGFGITGDHQMG------------------FGGFNSGSGNIGFGNSG 278 + N G NTG+ N G G G + G G N G N G+GN G Sbjct 1212 NANTGLFNTGNVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIG 1271 Query 279 TGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTI 310 N G SGS + GI G IG S T+ Sbjct 1272 DLNTGALISGSYSNGILWRGDYQGLIGYSDTL 1303 Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust. Identities = 56/145 (39%), Positives = 68/145 (47%), Gaps = 28/145 (19%) Query 209 NIGSGNTGTGNIGSGNTG-SGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFG--GF 265 N+GSG +G NI +GN G SG L +G L G + FGNT SG + +G F Sbjct 968 NVGSGGSGFWNI-AGNLGNSGFLNVGPLTSGILNFGNTVSG-----LYNTSTLGLATSAF 1021 Query 266 NSGSG-------------------NIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGT 306 +SG G N GF N GT N+G N G N+G GN GS N G G Sbjct 1022 HSGVGNTDSQLAGFMRNAAGGTLFNFGFANDGTLNLGNANLGDYNVGSGNVGSYNFGSGN 1081 Query 307 SGTINAGLGSAGSLNTSFWNAGMQN 331 G + G G+ GS N F N G N Sbjct 1082 IGNGSFGFGNIGSNNFGFGNVGSNN 1106 >gi|339631970|ref|YP_004723612.1| PPE family protein [Mycobacterium africanum GM041182] gi|339331326|emb|CCC27010.1| PPE family protein [Mycobacterium africanum GM041182] Length=1838 Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 192/399 (49%), Positives = 254/399 (64%), Gaps = 35/399 (8%) Query 5 HFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPS 64 +F+ LPPEINSAL+F G GS P+ AAA AW +LA EL ++ AS SVTS L +WLGPS Sbjct 2 NFSTLPPEINSALIFGGAGSEPMSAAAVAWDQLAMELASAAASFNSVTSGLVGESWLGPS 61 Query 65 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLA 124 +AAM A YL WL+ AAAQA+++A QA A+ FEA AA VQPA+VAANR + L Sbjct 62 SAAMAAAVAPYLGWLAAAAAQAQRSATQAAALVAEFEAVRAAMVQPALVAANRSDLVSLV 121 Query 125 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDI-- 182 +N+FGQNAPA+ +EAAYEQMWA+DV+ M+ YH ASA + L P+ +NL D+ Sbjct 122 FSNFFGQNAPAIAAIEAAYEQMWAIDVSVMSAYHAGASAVASALTPFTAPPQNL-TDLPA 180 Query 183 ------------------GKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGN 224 G ++LG N+G G +G N+G N+GS N G N G GN Sbjct 181 QLAAAPAAVVTAAITSSKGVLANLSLGLANSGFGQMGAANLGILNLGSLNPGGNNFGLGN 240 Query 225 TGSGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGL 284 GS N+GLGN G+GNIGFGNTG+GNIGFG+TGD+Q GFGG+NSG+GNIG NSGTGN+G+ Sbjct 241 VGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGI 300 Query 285 FNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAAL 344 N+G+GN GIGNSG+ + N G+G+ G NT F+NAG+ N +G+ Sbjct 301 GNTGTGNFGIGNSGT---------SYNTGIGNTGQANTGFFNAGIANTGIGNTGNYNTGS 351 Query 345 VSSAGYATGGMSTAALSSGI-----LASALGSTGGLQHG 378 + + TG +T + ++G L + +G+TG + G Sbjct 352 FNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGNVNTG 390 Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 89/148 (61%), Positives = 107/148 (73%), Gaps = 6/148 (4%) Query 190 LGFGNTGSGNIGNNNIGNNNIGSGNTGTG------NIGSGNTGSGNLGLGNLGDGNIGFG 243 GFGN GS N G N+G+NN+G NTG G NIG GN G N G N+G+GNIGFG Sbjct 1113 FGFGNIGSNNFGFGNVGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFG 1172 Query 244 NTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSG 303 NTG+GNIG G+TGD+Q+GFG NSGSGNIGF NSG GN+G FNSG+GN+GIGNSG+ N+G Sbjct 1173 NTGTGNIGIGLTGDNQVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTG 1232 Query 304 IGTSGTINAGLGSAGSLNTSFWNAGMQN 331 +G G N GL + G++NT NAG N Sbjct 1233 LGNVGNANTGLFNTGNVNTGIGNAGSYN 1260 Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 80/186 (44%), Positives = 103/186 (56%), Gaps = 18/186 (9%) Query 171 WQQVLRNLGI-DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSG--NTGS 227 + L N+G +IG N N GF N G+GNIG N G NIG G TG +G G N+GS Sbjct 1142 LTEALHNIGFGNIGGN---NYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGS 1198 Query 228 GNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNS 287 GN+G N G+GNIGF N+G+GN+G G NSG+ N G GN G N GLFN+ Sbjct 1199 GNIGFFNSGNGNIGFFNSGNGNVGIG------------NSGNYNTGLGNVGNANTGLFNT 1246 Query 288 GSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSS 347 G+ N GIGN+GS N+G +G N G + G+ NT + N G N G+ + S Sbjct 1247 GNVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1306 Query 348 AGYATG 353 Y+ G Sbjct 1307 GSYSNG 1312 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 62/152 (41%), Positives = 78/152 (52%), Gaps = 18/152 (11%) Query 177 NLGIDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLG 236 N+GI + + Q+ G N+GSGNIG N GN NIG N+G GN+G GN+G+ N GLGN+G Sbjct 1178 NIGIGLTGDNQVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVG 1237 Query 237 DGNIGFGNTGSGNIGFGITGDHQMG------------------FGGFNSGSGNIGFGNSG 278 + N G NTG+ N G G G + G G N G N G+GN G Sbjct 1238 NANTGLFNTGNVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIG 1297 Query 279 TGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTI 310 N G SGS + GI G IG S T+ Sbjct 1298 DLNTGALISGSYSNGILWRGDYQGLIGYSDTL 1329 Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust. Identities = 56/145 (39%), Positives = 68/145 (47%), Gaps = 28/145 (19%) Query 209 NIGSGNTGTGNIGSGNTG-SGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFG--GF 265 N+GSG +G NI +GN G SG L +G L G + FGNT SG + +G F Sbjct 994 NVGSGGSGFWNI-AGNLGNSGFLNVGPLTSGILNFGNTVSG-----LYNTSTLGLATSAF 1047 Query 266 NSGSG-------------------NIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGT 306 +SG G N GF N GT N+G N G N+G GN GS N G G Sbjct 1048 HSGVGNTDSQLAGFMRNAAGGTLFNFGFANDGTLNLGNANLGDYNVGSGNVGSYNFGSGN 1107 Query 307 SGTINAGLGSAGSLNTSFWNAGMQN 331 G + G G+ GS N F N G N Sbjct 1108 IGNGSFGFGNIGSNNFGFGNVGSNN 1132 >gi|385991283|ref|YP_005909581.1| PPE family protein [Mycobacterium tuberculosis CCDC5180] gi|339298476|gb|AEJ50586.1| PPE family protein [Mycobacterium tuberculosis CCDC5180] Length=1707 Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 192/399 (49%), Positives = 254/399 (64%), Gaps = 35/399 (8%) Query 5 HFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPS 64 +F+ LPPEINSAL+F G GS P+ AAA AW +LA EL ++ AS SVTS L +WLGPS Sbjct 13 NFSTLPPEINSALIFGGAGSEPMSAAAVAWDQLAMELASAAASFNSVTSGLVGESWLGPS 72 Query 65 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLA 124 +AAM A YL WL+ AAAQA+++A QA A+ FEA AA VQPA+VAANR + L Sbjct 73 SAAMAAAVAPYLGWLAAAAAQAQRSATQAAALVAEFEAVRAAMVQPALVAANRSDLVSLV 132 Query 125 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDI-- 182 +N+FGQNAPA+ +EAAYEQMWA+DV+ M+ YH ASA + L P+ +NL D+ Sbjct 133 FSNFFGQNAPAIAAIEAAYEQMWAIDVSVMSAYHAGASAVASALTPFTAPPQNL-TDLPA 191 Query 183 ------------------GKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGN 224 G ++LG N+G G +G N+G N+GS N G N G GN Sbjct 192 QLAAAPAAVVTAAITSSKGVLANLSLGLANSGFGQMGAANLGILNLGSLNPGGNNFGLGN 251 Query 225 TGSGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGL 284 GS N+GLGN G+GNIGFGNTG+GNIGFG+TGD+Q GFGG+NSG+GNIG NSGTGN+G+ Sbjct 252 VGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGI 311 Query 285 FNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAAL 344 N+G+GN GIGNSG+ + N G+G+ G NT F+NAG+ N +G+ Sbjct 312 GNTGTGNFGIGNSGT---------SYNTGIGNTGQANTGFFNAGIANTGIGNTGNYNTGS 362 Query 345 VSSAGYATGGMSTAALSSGI-----LASALGSTGGLQHG 378 + + TG +T + ++G L + +G+TG + G Sbjct 363 FNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGNVNTG 401 Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 89/148 (61%), Positives = 107/148 (73%), Gaps = 6/148 (4%) Query 190 LGFGNTGSGNIGNNNIGNNNIGSGNTGTG------NIGSGNTGSGNLGLGNLGDGNIGFG 243 GFGN GS N G N+G+NN+G NTG G NIG GN G N G N+G+GNIGFG Sbjct 1024 FGFGNIGSNNFGFGNVGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFG 1083 Query 244 NTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSG 303 NTG+GNIG G+TGD+Q+GFG NSGSGNIGF NSG GN+G FNSG+GN+GIGNSG+ N+G Sbjct 1084 NTGTGNIGIGLTGDNQVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTG 1143 Query 304 IGTSGTINAGLGSAGSLNTSFWNAGMQN 331 +G G N GL + G++NT NAG N Sbjct 1144 LGNVGNANTGLFNTGNVNTGIGNAGSYN 1171 Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 80/186 (44%), Positives = 103/186 (56%), Gaps = 18/186 (9%) Query 171 WQQVLRNLGI-DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSG--NTGS 227 + L N+G +IG N N GF N G+GNIG N G NIG G TG +G G N+GS Sbjct 1053 LTEALHNIGFGNIGGN---NYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGS 1109 Query 228 GNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNS 287 GN+G N G+GNIGF N+G+GN+G G NSG+ N G GN G N GLFN+ Sbjct 1110 GNIGFFNSGNGNIGFFNSGNGNVGIG------------NSGNYNTGLGNVGNANTGLFNT 1157 Query 288 GSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSS 347 G+ N GIGN+GS N+G +G N G + G+ NT + N G N G+ + S Sbjct 1158 GNVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1217 Query 348 AGYATG 353 Y+ G Sbjct 1218 GSYSNG 1223 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 62/152 (41%), Positives = 78/152 (52%), Gaps = 18/152 (11%) Query 177 NLGIDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLG 236 N+GI + + Q+ G N+GSGNIG N GN NIG N+G GN+G GN+G+ N GLGN+G Sbjct 1089 NIGIGLTGDNQVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVG 1148 Query 237 DGNIGFGNTGSGNIGFGITGDHQMG------------------FGGFNSGSGNIGFGNSG 278 + N G NTG+ N G G G + G G N G N G+GN G Sbjct 1149 NANTGLFNTGNVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIG 1208 Query 279 TGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTI 310 N G SGS + GI G IG S T+ Sbjct 1209 DLNTGALISGSYSNGILWRGDYQGLIGYSDTL 1240 Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust. Identities = 56/145 (39%), Positives = 68/145 (47%), Gaps = 28/145 (19%) Query 209 NIGSGNTGTGNIGSGNTG-SGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFG--GF 265 N+GSG +G NI +GN G SG L +G L G + FGNT SG + +G F Sbjct 905 NVGSGGSGFWNI-AGNLGNSGFLNVGPLTSGILNFGNTVSG-----LYNTSTLGLATSAF 958 Query 266 NSGSG-------------------NIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGT 306 +SG G N GF N GT N+G N G N+G GN GS N G G Sbjct 959 HSGVGNTDSQLAGFMRNAAGGTLFNFGFANDGTLNLGNANLGDYNVGSGNVGSYNFGSGN 1018 Query 307 SGTINAGLGSAGSLNTSFWNAGMQN 331 G + G G+ GS N F N G N Sbjct 1019 IGNGSFGFGNIGSNNFGFGNVGSNN 1043 >gi|289574600|ref|ZP_06454827.1| PPE family protein [Mycobacterium tuberculosis K85] gi|289539031|gb|EFD43609.1| PPE family protein [Mycobacterium tuberculosis K85] Length=1751 Score = 270 bits (690), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 192/399 (49%), Positives = 254/399 (64%), Gaps = 35/399 (8%) Query 5 HFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPS 64 +F+ LPPEINSAL+F G GS P+ AAA AW +LA EL ++ AS SVTS L +WLGPS Sbjct 13 NFSTLPPEINSALIFGGAGSEPMSAAAVAWDQLAMELASAAASFNSVTSGLVGESWLGPS 72 Query 65 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLA 124 +AAM A YL WL+ AAAQA+++A QA A+ FEA AA VQPA+VAANR + L Sbjct 73 SAAMAAAVAPYLGWLAAAAAQAQRSATQAAALVAEFEAVRAAMVQPALVAANRSDLVSLV 132 Query 125 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDI-- 182 +N+FGQNAPA+ +EAAYEQMWA+DV+ M+ YH ASA + L P+ +NL D+ Sbjct 133 FSNFFGQNAPAIAAIEAAYEQMWAIDVSVMSAYHAGASAVASALTPFTAPPQNL-TDLPA 191 Query 183 ------------------GKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGN 224 G ++LG N+G G +G N+G N+GS N G N G GN Sbjct 192 QLAAAPAAVVTAAITSSKGVLANLSLGLANSGFGQMGAANLGILNLGSLNPGGNNFGLGN 251 Query 225 TGSGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGL 284 GS N+GLGN G+GNIGFGNTG+GNIGFG+TGD+Q GFGG+NSG+GNIG NSGTGN+G+ Sbjct 252 VGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGI 311 Query 285 FNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAAL 344 N+G+GN GIGNSG+ + N G+G+ G NT F+NAG+ N +G+ Sbjct 312 GNTGTGNFGIGNSGT---------SYNTGIGNTGQANTGFFNAGIANTGIGNTGNYNTGS 362 Query 345 VSSAGYATGGMSTAALSSGI-----LASALGSTGGLQHG 378 + + TG +T + ++G L + +G+TG + G Sbjct 363 FNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGNVNTG 401 Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 89/148 (61%), Positives = 107/148 (73%), Gaps = 6/148 (4%) Query 190 LGFGNTGSGNIGNNNIGNNNIGSGNTGTG------NIGSGNTGSGNLGLGNLGDGNIGFG 243 GFGN GS N G N+G+NN+G NTG G NIG GN G N G N+G+GNIGFG Sbjct 1003 FGFGNIGSNNFGFGNVGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFG 1062 Query 244 NTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSG 303 NTG+GNIG G+TGD+Q+GFG NSGSGNIGF NSG GN+G FNSG+GN+GIGNSG+ N+G Sbjct 1063 NTGTGNIGIGLTGDNQVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTG 1122 Query 304 IGTSGTINAGLGSAGSLNTSFWNAGMQN 331 +G G N GL + G++NT NAG N Sbjct 1123 LGNVGNANTGLFNTGNVNTGIGNAGSYN 1150 Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 83/163 (51%), Positives = 101/163 (62%), Gaps = 30/163 (18%) Query 182 IGKNGQINLGFGNTGSG-----------NIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNL 230 G G NLGF NTG G NIG NN G NIG+GN IG GNTG+GN+ Sbjct 1015 FGNVGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGN-----IGFGNTGTGNI 1069 Query 231 GLGNLGDGNIGFG--NTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSG 288 G+G GD +GFG N+GSGNIGF FNSG+GNIGF NSG GNVG+ NSG Sbjct 1070 GIGLTGDNQVGFGALNSGSGNIGF------------FNSGNGNIGFFNSGNGNVGIGNSG 1117 Query 289 SGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQN 331 + N G+GN G+ N+G+ +G +N G+G+AGS NT +NAG N Sbjct 1118 NYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTGSYNAGDTN 1160 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 80/186 (44%), Positives = 103/186 (56%), Gaps = 18/186 (9%) Query 171 WQQVLRNLGI-DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSG--NTGS 227 + L N+G +IG N N GF N G+GNIG N G NIG G TG +G G N+GS Sbjct 1032 LTEALHNIGFGNIGGN---NYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGS 1088 Query 228 GNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNS 287 GN+G N G+GNIGF N+G+GN+G G NSG+ N G GN G N GLFN+ Sbjct 1089 GNIGFFNSGNGNIGFFNSGNGNVGIG------------NSGNYNTGLGNVGNANTGLFNT 1136 Query 288 GSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSS 347 G+ N GIGN+GS N+G +G N G + G+ NT + N G N G+ + S Sbjct 1137 GNVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1196 Query 348 AGYATG 353 Y+ G Sbjct 1197 GSYSNG 1202 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 40/93 (44%), Positives = 50/93 (54%), Gaps = 10/93 (10%) Query 180 IDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGS---GNTGSGNL------ 230 + IG +G N G GN G+ N G N GN N G GN G+ N GS G+T +G+L Sbjct 1111 VGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNAN 1170 Query 231 -GLGNLGDGNIGFGNTGSGNIGFGITGDHQMGF 262 G NLGD N G+GN G N G I+G + G Sbjct 1171 TGYLNLGDLNTGWGNIGDLNTGALISGSYSNGI 1203 Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust. Identities = 56/145 (39%), Positives = 68/145 (47%), Gaps = 28/145 (19%) Query 209 NIGSGNTGTGNIGSGNTG-SGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFG--GF 265 N+GSG +G NI +GN G SG L +G L G + FGNT SG + +G F Sbjct 884 NVGSGGSGFWNI-AGNLGNSGFLNVGPLTSGILNFGNTVSG-----LYNTSTLGLATSAF 937 Query 266 NSGSG-------------------NIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGT 306 +SG G N GF N GT N+G N G N+G GN GS N G G Sbjct 938 HSGVGNTDSQLAGFMRNAAGGTLFNFGFANDGTLNLGNANLGDYNVGSGNVGSYNFGSGN 997 Query 307 SGTINAGLGSAGSLNTSFWNAGMQN 331 G + G G+ GS N F N G N Sbjct 998 IGNGSFGFGNIGSNNFGFGNVGSNN 1022 >gi|289443397|ref|ZP_06433141.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289416316|gb|EFD13556.1| PPE family protein [Mycobacterium tuberculosis T46] Length=1810 Score = 270 bits (690), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 192/399 (49%), Positives = 254/399 (64%), Gaps = 35/399 (8%) Query 5 HFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPS 64 +F+ LPPEINSAL+F G GS P+ AAA AW +LA EL ++ AS SVTS L +WLGPS Sbjct 2 NFSTLPPEINSALIFGGAGSEPMSAAAVAWDQLAMELASAAASFNSVTSGLVGESWLGPS 61 Query 65 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLA 124 +AAM A YL WL+ AAAQA+++A QA A+ FEA AA VQPA+VAANR + L Sbjct 62 SAAMAAAVAPYLGWLAAAAAQAQRSATQAAALVAEFEAVRAAMVQPALVAANRSDLVSLV 121 Query 125 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDI-- 182 +N+FGQNAPA+ +EAAYEQMWA+DV+ M+ YH ASA + L P+ +NL D+ Sbjct 122 FSNFFGQNAPAIAAIEAAYEQMWAIDVSVMSAYHAGASAVASALTPFTAPPQNL-TDLPA 180 Query 183 ------------------GKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGN 224 G ++LG N+G G +G N+G N+GS N G N G GN Sbjct 181 QLAAAPAAVVTAAITSSKGVLANLSLGLANSGFGQMGAANLGILNLGSLNPGGNNFGLGN 240 Query 225 TGSGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGL 284 GS N+GLGN G+GNIGFGNTG+GNIGFG+TGD+Q GFGG+NSG+GNIG NSGTGN+G+ Sbjct 241 VGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGI 300 Query 285 FNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAAL 344 N+G+GN GIGNSG+ + N G+G+ G NT F+NAG+ N +G+ Sbjct 301 GNTGTGNFGIGNSGT---------SYNTGIGNTGQANTGFFNAGIANTGIGNTGNYNTGS 351 Query 345 VSSAGYATGGMSTAALSSGI-----LASALGSTGGLQHG 378 + + TG +T + ++G L + +G+TG + G Sbjct 352 FNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGNVNTG 390 Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 89/148 (61%), Positives = 107/148 (73%), Gaps = 6/148 (4%) Query 190 LGFGNTGSGNIGNNNIGNNNIGSGNTGTG------NIGSGNTGSGNLGLGNLGDGNIGFG 243 GFGN GS N G N+G+NN+G NTG G NIG GN G N G N+G+GNIGFG Sbjct 966 FGFGNIGSNNFGFGNVGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFG 1025 Query 244 NTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSG 303 NTG+GNIG G+TGD+Q+GFG NSGSGNIGF NSG GN+G FNSG+GN+GIGNSG+ N+G Sbjct 1026 NTGTGNIGIGLTGDNQVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTG 1085 Query 304 IGTSGTINAGLGSAGSLNTSFWNAGMQN 331 +G G N GL + G++NT NAG N Sbjct 1086 LGNVGNANTGLFNTGNVNTGIGNAGSYN 1113 Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 80/186 (44%), Positives = 103/186 (56%), Gaps = 18/186 (9%) Query 171 WQQVLRNLGI-DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSG--NTGS 227 + L N+G +IG N N GF N G+GNIG N G NIG G TG +G G N+GS Sbjct 995 LTEALHNIGFGNIGGN---NYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGS 1051 Query 228 GNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNS 287 GN+G N G+GNIGF N+G+GN+G G NSG+ N G GN G N GLFN+ Sbjct 1052 GNIGFFNSGNGNIGFFNSGNGNVGIG------------NSGNYNTGLGNVGNANTGLFNT 1099 Query 288 GSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSS 347 G+ N GIGN+GS N+G +G N G + G+ NT + N G N G+ + S Sbjct 1100 GNVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1159 Query 348 AGYATG 353 Y+ G Sbjct 1160 GSYSNG 1165 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 62/152 (41%), Positives = 78/152 (52%), Gaps = 18/152 (11%) Query 177 NLGIDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLG 236 N+GI + + Q+ G N+GSGNIG N GN NIG N+G GN+G GN+G+ N GLGN+G Sbjct 1031 NIGIGLTGDNQVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVG 1090 Query 237 DGNIGFGNTGSGNIGFGITGDHQMG------------------FGGFNSGSGNIGFGNSG 278 + N G NTG+ N G G G + G G N G N G+GN G Sbjct 1091 NANTGLFNTGNVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIG 1150 Query 279 TGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTI 310 N G SGS + GI G IG S T+ Sbjct 1151 DLNTGALISGSYSNGILWRGDYQGLIGYSDTL 1182 Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust. Identities = 56/145 (39%), Positives = 68/145 (47%), Gaps = 28/145 (19%) Query 209 NIGSGNTGTGNIGSGNTG-SGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFG--GF 265 N+GSG +G NI +GN G SG L +G L G + FGNT SG + +G F Sbjct 847 NVGSGGSGFWNI-AGNLGNSGFLNVGPLTSGILNFGNTVSG-----LYNTSTLGLATSAF 900 Query 266 NSGSG-------------------NIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGT 306 +SG G N GF N GT N+G N G N+G GN GS N G G Sbjct 901 HSGVGNTDSQLAGFMRNAAGGTLFNFGFANDGTLNLGNANLGDYNVGSGNVGSYNFGSGN 960 Query 307 SGTINAGLGSAGSLNTSFWNAGMQN 331 G + G G+ GS N F N G N Sbjct 961 IGNGSFGFGNIGSNNFGFGNVGSNN 985 >gi|289750499|ref|ZP_06509877.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289691086|gb|EFD58515.1| PPE family protein [Mycobacterium tuberculosis T92] Length=1660 Score = 270 bits (690), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 192/399 (49%), Positives = 254/399 (64%), Gaps = 35/399 (8%) Query 5 HFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPS 64 +F+ LPPEINSAL+F G GS P+ AAA AW +LA EL ++ AS SVTS L +WLGPS Sbjct 13 NFSTLPPEINSALIFGGAGSEPMSAAAVAWDQLAMELASAAASFNSVTSGLVGESWLGPS 72 Query 65 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLA 124 +AAM A YL WL+ AAAQA+++A QA A+ FEA AA VQPA+VAANR + L Sbjct 73 SAAMAAAVAPYLGWLAAAAAQAQRSATQAAALVAEFEAVRAAMVQPALVAANRSDLVSLV 132 Query 125 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDI-- 182 +N+FGQNAPA+ +EAAYEQMWA+DV+ M+ YH ASA + L P+ +NL D+ Sbjct 133 FSNFFGQNAPAIAAIEAAYEQMWAIDVSVMSAYHAGASAVASALTPFTAPPQNL-TDLPA 191 Query 183 ------------------GKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGN 224 G ++LG N+G G +G N+G N+GS N G N G GN Sbjct 192 QLAAAPAAVVTAAITSSKGVLANLSLGLANSGFGQMGAANLGILNLGSLNPGGNNFGLGN 251 Query 225 TGSGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGL 284 GS N+GLGN G+GNIGFGNTG+GNIGFG+TGD+Q GFGG+NSG+GNIG NSGTGN+G+ Sbjct 252 VGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGI 311 Query 285 FNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAAL 344 N+G+GN GIGNSG+ + N G+G+ G NT F+NAG+ N +G+ Sbjct 312 GNTGTGNFGIGNSGT---------SYNTGIGNTGQANTGFFNAGIANTGIGNTGNYNTGS 362 Query 345 VSSAGYATGGMSTAALSSGI-----LASALGSTGGLQHG 378 + + TG +T + ++G L + +G+TG + G Sbjct 363 FNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGNVNTG 401 Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 89/148 (61%), Positives = 107/148 (73%), Gaps = 6/148 (4%) Query 190 LGFGNTGSGNIGNNNIGNNNIGSGNTGTG------NIGSGNTGSGNLGLGNLGDGNIGFG 243 GFGN GS N G N+G+NN+G NTG G NIG GN G N G N+G+GNIGFG Sbjct 977 FGFGNIGSNNFGFGNVGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFG 1036 Query 244 NTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSG 303 NTG+GNIG G+TGD+Q+GFG NSGSGNIGF NSG GN+G FNSG+GN+GIGNSG+ N+G Sbjct 1037 NTGTGNIGIGLTGDNQVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTG 1096 Query 304 IGTSGTINAGLGSAGSLNTSFWNAGMQN 331 +G G N GL + G++NT NAG N Sbjct 1097 LGNVGNANTGLFNTGNVNTGIGNAGSYN 1124 Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 80/185 (44%), Positives = 103/185 (56%), Gaps = 18/185 (9%) Query 172 QQVLRNLGI-DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSG--NTGSG 228 + L N+G +IG N N GF N G+GNIG N G NIG G TG +G G N+GSG Sbjct 1007 TEALHNIGFGNIGGN---NYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSG 1063 Query 229 NLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSG 288 N+G N G+GNIGF N+G+GN+G G NSG+ N G GN G N GLFN+G Sbjct 1064 NIGFFNSGNGNIGFFNSGNGNVGIG------------NSGNYNTGLGNVGNANTGLFNTG 1111 Query 289 SGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSA 348 + N GIGN+GS N+G +G N G + G+ NT + N G N G+ + S Sbjct 1112 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALISG 1171 Query 349 GYATG 353 Y+ G Sbjct 1172 SYSNG 1176 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 62/152 (41%), Positives = 78/152 (52%), Gaps = 18/152 (11%) Query 177 NLGIDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLG 236 N+GI + + Q+ G N+GSGNIG N GN NIG N+G GN+G GN+G+ N GLGN+G Sbjct 1042 NIGIGLTGDNQVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVG 1101 Query 237 DGNIGFGNTGSGNIGFGITGDHQMG------------------FGGFNSGSGNIGFGNSG 278 + N G NTG+ N G G G + G G N G N G+GN G Sbjct 1102 NANTGLFNTGNVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIG 1161 Query 279 TGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTI 310 N G SGS + GI G IG S T+ Sbjct 1162 DLNTGALISGSYSNGILWRGDYQGLIGYSDTL 1193 Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust. Identities = 56/145 (39%), Positives = 68/145 (47%), Gaps = 28/145 (19%) Query 209 NIGSGNTGTGNIGSGNTG-SGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFG--GF 265 N+GSG +G NI +GN G SG L +G L G + FGNT SG + +G F Sbjct 858 NVGSGGSGFWNI-AGNLGNSGFLNVGPLTSGILNFGNTVSG-----LYNTSTLGLATSAF 911 Query 266 NSGSG-------------------NIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGT 306 +SG G N GF N GT N+G N G N+G GN GS N G G Sbjct 912 HSGVGNTDSQLAGFMRNAAGGTLFNFGFANDGTLNLGNANLGDYNVGSGNVGSYNFGSGN 971 Query 307 SGTINAGLGSAGSLNTSFWNAGMQN 331 G + G G+ GS N F N G N Sbjct 972 IGNGSFGFGNIGSNNFGFGNVGSNN 996 >gi|289745649|ref|ZP_06505027.1| predicted protein [Mycobacterium tuberculosis 02_1987] gi|289758026|ref|ZP_06517404.1| predicted protein [Mycobacterium tuberculosis T85] gi|289686177|gb|EFD53665.1| predicted protein [Mycobacterium tuberculosis 02_1987] gi|289713590|gb|EFD77602.1| predicted protein [Mycobacterium tuberculosis T85] gi|326903523|gb|EGE50456.1| PPE family protein [Mycobacterium tuberculosis W-148] Length=547 Score = 269 bits (688), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 191/398 (48%), Positives = 252/398 (64%), Gaps = 33/398 (8%) Query 5 HFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPS 64 +F+ LPPEINSAL+F G GS P+ AAA AW +LA EL ++ AS SVTS L +WLGPS Sbjct 13 NFSTLPPEINSALIFGGAGSEPMSAAAVAWDQLAMELASAAASFNSVTSGLVGESWLGPS 72 Query 65 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLA 124 +AAM A YL WL+ AAAQA+++A QA A+ FEA AA VQPA+VAANR + L Sbjct 73 SAAMAAAVAPYLGWLAAAAAQAQRSATQAAALVAEFEAVRAAMVQPALVAANRSDLVSLV 132 Query 125 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI---- 180 +N+FGQNAPA+ +EAAYEQMWA+DV+ M+ YH ASA + L P+ +NL Sbjct 133 FSNFFGQNAPAIAAIEAAYEQMWAIDVSVMSAYHAGASAVASALTPFTAPPQNLTDLPAQ 192 Query 181 ---------------DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNT 225 G ++LG N+G G +G N+G N+GS N G N G GN Sbjct 193 LAAAPAAVVTAAITSSKGVLANLSLGLANSGFGQMGAANLGILNLGSLNPGGNNFGLGNV 252 Query 226 GSGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLF 285 GS N+GLGN G+GNIGFGNTG+GNIGFG+TGD+Q GFGG+NSG+GNIG NSGTGN+G+ Sbjct 253 GSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIG 312 Query 286 NSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALV 345 N+G+GN GIGNSG+ + N G+G+ G NT F+NAG+ N +G+ Sbjct 313 NTGTGNFGIGNSGT---------SYNTGIGNTGQANTGFFNAGIANTGIGNTGNYNTGSF 363 Query 346 SSAGYATGGMSTAALSSGI-----LASALGSTGGLQHG 378 + + TG +T + ++G L + +G+TG + G Sbjct 364 NLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGNVNTG 401 >gi|313658804|ref|ZP_07815684.1| PPE family protein [Mycobacterium tuberculosis KZN V2475] Length=1399 Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 192/399 (49%), Positives = 254/399 (64%), Gaps = 35/399 (8%) Query 5 HFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPS 64 +F+ LPPEINSAL+F G GS P+ AAA AW +LA EL ++ AS SVTS L +WLGPS Sbjct 13 NFSTLPPEINSALIFGGAGSEPMSAAAVAWDQLAMELASAAASFNSVTSGLVGESWLGPS 72 Query 65 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLA 124 +AAM A YL WL+ AAAQA+++A QA A+ FEA AA VQPA+VAANR + L Sbjct 73 SAAMAAAVAPYLGWLAAAAAQAQRSATQAAALVAEFEAVRAAMVQPALVAANRSDLVSLV 132 Query 125 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDI-- 182 +N+FGQNAPA+ +EAAYEQMWA+DV+ M+ YH ASA + L P+ +NL D+ Sbjct 133 FSNFFGQNAPAIAAIEAAYEQMWAIDVSVMSAYHAGASAVASALTPFTAPPQNL-TDLPA 191 Query 183 ------------------GKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGN 224 G ++LG N+G G +G N+G N+GS N G N G GN Sbjct 192 QLAAAPAAVVTAAITSSKGVLANLSLGLANSGFGQMGAANLGILNLGSLNPGGNNFGLGN 251 Query 225 TGSGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGL 284 GS N+GLGN G+GNIGFGNTG+GNIGFG+TGD+Q GFGG+NSG+GNIG NSGTGN+G+ Sbjct 252 VGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGI 311 Query 285 FNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAAL 344 N+G+GN GIGNSG+ + N G+G+ G NT F+NAG+ N +G+ Sbjct 312 GNTGTGNFGIGNSGT---------SYNTGIGNTGQANTGFFNAGIANTGIGNTGNYNTGS 362 Query 345 VSSAGYATGGMSTAALSSGI-----LASALGSTGGLQHG 378 + + TG +T + ++G L + +G+TG + G Sbjct 363 FNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGNVNTG 401 Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 94/180 (53%), Positives = 120/180 (67%), Gaps = 6/180 (3%) Query 190 LGFGNTGSGNIGNNNIGNNNIGSGNTGTG------NIGSGNTGSGNLGLGNLGDGNIGFG 243 GFGN GS N G N+G+NN+G NTG G NIG GN G N G N+G+GNIGFG Sbjct 831 FGFGNIGSNNFGFGNVGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFG 890 Query 244 NTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSG 303 NTG+GNIG G+TGD+Q+GFG NSGSGNIGF NSG GN+G FNSG+GN+GIGNSG+ N+G Sbjct 891 NTGTGNIGIGLTGDNQVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTG 950 Query 304 IGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSG 363 +G G N GL + G++NT NAG N +A + ++ TG ++ L++G Sbjct 951 LGNVGNANTGLFNTGNVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTG 1010 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 82/185 (45%), Positives = 104/185 (57%), Gaps = 18/185 (9%) Query 172 QQVLRNLGI-DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNL 230 + L N+G +IG N N GF N G+G NIG GNTGTGNIG G TG + Sbjct 861 TEALHNIGFGNIGGN---NYGFANIGNG----------NIGFGNTGTGNIGIGLTGDNQV 907 Query 231 GLG--NLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSG 288 G G N G GNIGF N+G+GNIGF +G+ +G G NSG+ N G GN G N GLFN+G Sbjct 908 GFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIG--NSGNYNTGLGNVGNANTGLFNTG 965 Query 289 SGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSA 348 + N GIGN+GS N+G +G N G + G+ NT + N G N G+ + S Sbjct 966 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALISG 1025 Query 349 GYATG 353 Y+ G Sbjct 1026 SYSNG 1030 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/152 (41%), Positives = 78/152 (52%), Gaps = 18/152 (11%) Query 177 NLGIDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLG 236 N+GI + + Q+ G N+GSGNIG N GN NIG N+G GN+G GN+G+ N GLGN+G Sbjct 896 NIGIGLTGDNQVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVG 955 Query 237 DGNIGFGNTGSGNIGFGITGDHQMG------------------FGGFNSGSGNIGFGNSG 278 + N G NTG+ N G G G + G G N G N G+GN G Sbjct 956 NANTGLFNTGNVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIG 1015 Query 279 TGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTI 310 N G SGS + GI G IG S T+ Sbjct 1016 DLNTGALISGSYSNGILWRGDYQGLIGYSDTL 1047 Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust. Identities = 86/264 (33%), Positives = 115/264 (44%), Gaps = 55/264 (20%) Query 209 NIGSGNTGTGNIGSGNTG-SGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFG--GF 265 N+GSG +G NI +GN G SG L +G L G + FGNT SG + +G F Sbjct 712 NVGSGGSGFWNI-AGNLGNSGFLNVGPLTSGILNFGNTVSG-----LYNTSTLGLATSAF 765 Query 266 NSGSG-------------------NIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGT 306 +SG G N GF N GT N+G N G N+G GN GS N G G Sbjct 766 HSGVGNTDSQLAGFMRNAAGGTLFNFGFANDGTLNLGNANLGDYNVGSGNVGSYNFGSGN 825 Query 307 SGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILA 366 G + G G+ GS N F N G N G+A G L+ + Sbjct 826 IGNGSFGFGNIGSNNFGFGNVGSNN----------------LGFANTG---PGLTEALHN 866 Query 367 SALGSTGGLQHGLANVLNS--GLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPG 424 G+ GG +G AN+ N G NT + +G +G+ G G+ +GSG N G Sbjct 867 IGFGNIGGNNYGFANIGNGNIGFGNT-----GTGNIGIGLTGDNQVGFGALNSGSG-NIG 920 Query 425 LRSPGTSYPSFVNSGSNDSGLRNT 448 + G F NSG+ + G+ N+ Sbjct 921 FFNSGNGNIGFFNSGNGNVGIGNS 944 >gi|308402956|ref|ZP_07493652.2| putative PPE family protein [Mycobacterium tuberculosis SUMu012] gi|308365845|gb|EFP54696.1| putative PPE family protein [Mycobacterium tuberculosis SUMu012] Length=745 Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 191/398 (48%), Positives = 252/398 (64%), Gaps = 33/398 (8%) Query 5 HFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPS 64 +F+ LPPEINSAL+F G GS P+ AAA AW +LA EL ++ AS SVTS L +WLGPS Sbjct 13 NFSTLPPEINSALIFGGAGSEPMSAAAVAWDQLAMELASAAASFNSVTSGLVGESWLGPS 72 Query 65 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLA 124 +AAM A YL WL+ AAAQA+++A QA A+ FEA AA VQPA+VAANR + L Sbjct 73 SAAMAAAVAPYLGWLAAAAAQAQRSATQAAALVAEFEAVRAAMVQPALVAANRSDLVSLV 132 Query 125 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGI---- 180 +N+FGQNAPA+ +EAAYEQMWA+DV+ M+ YH ASA + L P+ +NL Sbjct 133 FSNFFGQNAPAIAAIEAAYEQMWAIDVSVMSAYHAGASAVASALTPFTAPPQNLTDLPAQ 192 Query 181 ---------------DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNT 225 G ++LG N+G G +G N+G N+GS N G N G GN Sbjct 193 LAAAPAAVVTAAITSSKGVLANLSLGLANSGFGQMGAANLGILNLGSLNPGGNNFGLGNV 252 Query 226 GSGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLF 285 GS N+GLGN G+GNIGFGNTG+GNIGFG+TGD+Q GFGG+NSG+GNIG NSGTGN+G+ Sbjct 253 GSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIG 312 Query 286 NSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALV 345 N+G+GN GIGNSG+ + N G+G+ G NT F+NAG+ N +G+ Sbjct 313 NTGTGNFGIGNSGT---------SYNTGIGNTGQANTGFFNAGIANTGIGNTGNYNTGSF 363 Query 346 SSAGYATGGMSTAALSSGI-----LASALGSTGGLQHG 378 + + TG +T + ++G L + +G+TG + G Sbjct 364 NLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGNVNTG 401 >gi|253799036|ref|YP_003032037.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|375296286|ref|YP_005100553.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] gi|392432499|ref|YP_006473543.1| PPE family protein [Mycobacterium tuberculosis KZN 605] gi|253320539|gb|ACT25142.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|328458791|gb|AEB04214.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] gi|392053908|gb|AFM49466.1| PPE family protein [Mycobacterium tuberculosis KZN 605] Length=1399 Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 192/399 (49%), Positives = 254/399 (64%), Gaps = 35/399 (8%) Query 5 HFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPS 64 +F+ LPPEINSAL+F G GS P+ AAA AW +LA EL ++ AS SVTS L +WLGPS Sbjct 13 NFSTLPPEINSALIFGGAGSEPMSAAAVAWDQLAMELASAAASFNSVTSGLVGESWLGPS 72 Query 65 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLA 124 +AAM A YL WL+ AAAQA+++A QA A+ FEA AA VQPA+VAANR + L Sbjct 73 SAAMAAAVAPYLGWLAAAAAQAQRSATQAAALVAEFEAVRAAMVQPALVAANRSDLVSLV 132 Query 125 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDI-- 182 +N+FGQNAPA+ +EAAYEQMWA+DV+ M+ YH ASA + L P+ +NL D+ Sbjct 133 FSNFFGQNAPAIAAIEAAYEQMWAIDVSVMSAYHAGASAVASALTPFTAPPQNL-TDLPA 191 Query 183 ------------------GKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGN 224 G ++LG N+G G +G N+G N+GS N G N G GN Sbjct 192 QLAAAPAAVVTAAITSSKGVLANLSLGLANSGFGQMGAANLGILNLGSLNPGGNNFGLGN 251 Query 225 TGSGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGL 284 GS N+GLGN G+GNIGFGNTG+GNIGFG+TGD+Q GFGG+NSG+GNIG NSGTGN+G+ Sbjct 252 VGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGI 311 Query 285 FNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAAL 344 N+G+GN GIGNSG+ + N G+G+ G NT F+NAG+ N +G+ Sbjct 312 GNTGTGNFGIGNSGT---------SYNTGIGNTGQANTGFFNAGIANTGIGNTGNYNTGS 362 Query 345 VSSAGYATGGMSTAALSSGI-----LASALGSTGGLQHG 378 + + TG +T + ++G L + +G+TG + G Sbjct 363 FNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGNVNTG 401 Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 94/180 (53%), Positives = 120/180 (67%), Gaps = 6/180 (3%) Query 190 LGFGNTGSGNIGNNNIGNNNIGSGNTGTG------NIGSGNTGSGNLGLGNLGDGNIGFG 243 GFGN GS N G N+G+NN+G NTG G NIG GN G N G N+G+GNIGFG Sbjct 831 FGFGNIGSNNFGFGNVGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFG 890 Query 244 NTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSG 303 NTG+GNIG G+TGD+Q+GFG NSGSGNIGF NSG GN+G FNSG+GN+GIGNSG+ N+G Sbjct 891 NTGTGNIGIGLTGDNQVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTG 950 Query 304 IGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSG 363 +G G N GL + G++NT NAG N +A + ++ TG ++ L++G Sbjct 951 LGNVGNANTGLFNTGNVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTG 1010 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 80/185 (44%), Positives = 103/185 (56%), Gaps = 18/185 (9%) Query 172 QQVLRNLGI-DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSG--NTGSG 228 + L N+G +IG N N GF N G+GNIG N G NIG G TG +G G N+GSG Sbjct 861 TEALHNIGFGNIGGN---NYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSG 917 Query 229 NLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSG 288 N+G N G+GNIGF N+G+GN+G G NSG+ N G GN G N GLFN+G Sbjct 918 NIGFFNSGNGNIGFFNSGNGNVGIG------------NSGNYNTGLGNVGNANTGLFNTG 965 Query 289 SGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSA 348 + N GIGN+GS N+G +G N G + G+ NT + N G N G+ + S Sbjct 966 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALISG 1025 Query 349 GYATG 353 Y+ G Sbjct 1026 SYSNG 1030 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/152 (41%), Positives = 78/152 (52%), Gaps = 18/152 (11%) Query 177 NLGIDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLG 236 N+GI + + Q+ G N+GSGNIG N GN NIG N+G GN+G GN+G+ N GLGN+G Sbjct 896 NIGIGLTGDNQVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVG 955 Query 237 DGNIGFGNTGSGNIGFGITGDHQMG------------------FGGFNSGSGNIGFGNSG 278 + N G NTG+ N G G G + G G N G N G+GN G Sbjct 956 NANTGLFNTGNVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIG 1015 Query 279 TGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTI 310 N G SGS + GI G IG S T+ Sbjct 1016 DLNTGALISGSYSNGILWRGDYQGLIGYSDTL 1047 Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust. Identities = 86/264 (33%), Positives = 115/264 (44%), Gaps = 55/264 (20%) Query 209 NIGSGNTGTGNIGSGNTG-SGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFG--GF 265 N+GSG +G NI +GN G SG L +G L G + FGNT SG + +G F Sbjct 712 NVGSGGSGFWNI-AGNLGNSGFLNVGPLTSGILNFGNTVSG-----LYNTSTLGLATSAF 765 Query 266 NSGSG-------------------NIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGT 306 +SG G N GF N GT N+G N G N+G GN GS N G G Sbjct 766 HSGVGNTDSQLAGFMRNAAGGTLFNFGFANDGTLNLGNANLGDYNVGSGNVGSYNFGSGN 825 Query 307 SGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSGILA 366 G + G G+ GS N F N G N G+A G L+ + Sbjct 826 IGNGSFGFGNIGSNNFGFGNVGSNN----------------LGFANTG---PGLTEALHN 866 Query 367 SALGSTGGLQHGLANVLNS--GLTNTPVAAPASAPVGGLDSGNPNPGSGSAAAGSGANPG 424 G+ GG +G AN+ N G NT + +G +G+ G G+ +GSG N G Sbjct 867 IGFGNIGGNNYGFANIGNGNIGFGNT-----GTGNIGIGLTGDNQVGFGALNSGSG-NIG 920 Query 425 LRSPGTSYPSFVNSGSNDSGLRNT 448 + G F NSG+ + G+ N+ Sbjct 921 FFNSGNGNIGFFNSGNGNVGIGNS 944 >gi|15841389|ref|NP_336426.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13881624|gb|AAK46240.1| PPE family protein [Mycobacterium tuberculosis CDC1551] Length=1491 Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 192/399 (49%), Positives = 254/399 (64%), Gaps = 35/399 (8%) Query 5 HFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPS 64 +F+ LPPEINSAL+F G GS P+ AAA AW +LA EL ++ AS SVTS L +WLGPS Sbjct 13 NFSTLPPEINSALIFGGAGSEPMSAAAVAWDQLAMELASAAASFNSVTSGLVGESWLGPS 72 Query 65 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLA 124 +AAM A YL WL+ AAAQA+++A QA A+ FEA AA VQPA+VAANR + L Sbjct 73 SAAMAAAVAPYLGWLAAAAAQAQRSATQAAALVAEFEAVRAAMVQPALVAANRSDLVSLV 132 Query 125 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDI-- 182 +N+FGQNAPA+ +EAAYEQMWA+DV+ M+ YH ASA + L P+ +NL D+ Sbjct 133 FSNFFGQNAPAIAAIEAAYEQMWAIDVSVMSAYHAGASAVASALTPFTAPPQNL-TDLPA 191 Query 183 ------------------GKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGN 224 G ++LG N+G G +G N+G N+GS N G N G GN Sbjct 192 QLAAAPAAVVTAAITSSKGVLANLSLGLANSGFGQMGAANLGILNLGSLNPGGNNFGLGN 251 Query 225 TGSGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGL 284 GS N+GLGN G+GNIGFGNTG+GNIGFG+TGD+Q GFGG+NSG+GNIG NSGTGN+G+ Sbjct 252 VGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGI 311 Query 285 FNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAAL 344 N+G+GN GIGNSG+ + N G+G+ G NT F+NAG+ N +G+ Sbjct 312 GNTGTGNFGIGNSGT---------SYNTGIGNTGQANTGFFNAGIANTGIGNTGNYNTGS 362 Query 345 VSSAGYATGGMSTAALSSGI-----LASALGSTGGLQHG 378 + + TG +T + ++G L + +G+TG + G Sbjct 363 FNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGNVNTG 401 Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 94/180 (53%), Positives = 120/180 (67%), Gaps = 6/180 (3%) Query 190 LGFGNTGSGNIGNNNIGNNNIGSGNTGTG------NIGSGNTGSGNLGLGNLGDGNIGFG 243 GFGN GS N G N+G+NN+G NTG G NIG GN G N G N+G+GNIGFG Sbjct 831 FGFGNIGSNNFGFGNVGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFG 890 Query 244 NTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSG 303 NTG+GNIG G+TGD+Q+GFG NSGSGNIGF NSG GN+G FNSG+GN+GIGNSG+ N+G Sbjct 891 NTGTGNIGIGLTGDNQVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTG 950 Query 304 IGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYATGGMSTAALSSG 363 +G G N GL + G++NT NAG N +A + ++ TG ++ L++G Sbjct 951 LGNVGNANTGLFNTGNVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTG 1010 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 80/185 (44%), Positives = 103/185 (56%), Gaps = 18/185 (9%) Query 172 QQVLRNLGI-DIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSG--NTGSG 228 + L N+G +IG N N GF N G+GNIG N G NIG G TG +G G N+GSG Sbjct 861 TEALHNIGFGNIGGN---NYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSG 917 Query 229 NLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSG 288 N+G N G+GNIGF N+G+GN+G G NSG+ N G GN G N GLFN+G Sbjct 918 NIGFFNSGNGNIGFFNSGNGNVGIG------------NSGNYNTGLGNVGNANTGLFNTG 965 Query 289 SGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSA 348 + N GIGN+GS N+G +G N G + G+ NT + N G N G+ + S Sbjct 966 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALISG 1025 Query 349 GYATG 353 Y+ G Sbjct 1026 SYSNG 1030 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/152 (41%), Positives = 78/152 (52%), Gaps = 18/152 (11%) Query 177 NLGIDIGKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLG 236 N+GI + + Q+ G N+GSGNIG N GN NIG N+G GN+G GN+G+ N GLGN+G Sbjct 896 NIGIGLTGDNQVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVG 955 Query 237 DGNIGFGNTGSGNIGFGITGDHQMG------------------FGGFNSGSGNIGFGNSG 278 + N G NTG+ N G G G + G G N G N G+GN G Sbjct 956 NANTGLFNTGNVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIG 1015 Query 279 TGNVGLFNSGSGNIGIGNSGSLNSGIGTSGTI 310 N G SGS + GI G IG S T+ Sbjct 1016 DLNTGALISGSYSNGILWRGDYQGLIGYSDTL 1047 Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust. Identities = 56/145 (39%), Positives = 68/145 (47%), Gaps = 28/145 (19%) Query 209 NIGSGNTGTGNIGSGNTG-SGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFG--GF 265 N+GSG +G NI +GN G SG L +G L G + FGNT SG + +G F Sbjct 712 NVGSGGSGFWNI-AGNLGNSGFLNVGPLTSGILNFGNTVSG-----LYNTSTLGLATSAF 765 Query 266 NSGSG-------------------NIGFGNSGTGNVGLFNSGSGNIGIGNSGSLNSGIGT 306 +SG G N GF N GT N+G N G N+G GN GS N G G Sbjct 766 HSGVGNTDSQLAGFMRNAAGGTLFNFGFANDGTLNLGNANLGDYNVGSGNVGSYNFGSGN 825 Query 307 SGTINAGLGSAGSLNTSFWNAGMQN 331 G + G G+ GS N F N G N Sbjct 826 IGNGSFGFGNIGSNNFGFGNVGSNN 850 >gi|392386573|ref|YP_005308202.1| PPE34 [Mycobacterium tuberculosis UT205] gi|378545124|emb|CCE37400.1| PPE34 [Mycobacterium tuberculosis UT205] Length=1445 Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 192/399 (49%), Positives = 254/399 (64%), Gaps = 35/399 (8%) Query 5 HFAWLPPEINSALMFAGPGSGPLIAAATAWGELAEELLASIASLGSVTSELTSGAWLGPS 64 +F+ LPPEINSAL+F G GS P+ AAA AW +LA EL ++ AS SVTS L +WLGPS Sbjct 13 NFSTLPPEINSALIFGGAGSEPMSAAAVAWDQLAMELASAAASFNSVTSGLVGESWLGPS 72 Query 65 AAAMMAVATQYLAWLSTAAAQAEQAAAQAMAIATAFEAALAATVQPAVVAANRGLMQLLA 124 +AAM A YL WL+ AAAQA+++A QA A+ FEA AA VQPA+VAANR + L Sbjct 73 SAAMAAAVAPYLGWLAAAAAQAQRSATQAAALVAEFEAVRAAMVQPALVAANRSDLVSLV 132 Query 125 ATNWFGQNAPALMDVEAAYEQMWALDVAAMAGYHFDASAAVAQLAPWQQVLRNLGIDI-- 182 +N+FGQNAPA+ +EAAYEQMWA+DV+ M+ YH ASA + L P+ +NL D+ Sbjct 133 FSNFFGQNAPAIAAIEAAYEQMWAIDVSVMSAYHAGASAVASALTPFTAPPQNL-TDLPA 191 Query 183 ------------------GKNGQINLGFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGN 224 G ++LG N+G G +G N+G N+GS N G N G GN Sbjct 192 QLAAAPAAVVTAAITSSKGVLANLSLGLANSGFGQMGAANLGILNLGSLNPGGNNFGLGN 251 Query 225 TGSGNLGLGNLGDGNIGFGNTGSGNIGFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGL 284 GS N+GLGN G+GNIGFGNTG+GNIGFG+TGD+Q GFGG+NSG+GNIG NSGTGN+G+ Sbjct 252 VGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGI 311 Query 285 FNSGSGNIGIGNSGSLNSGIGTSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAAL 344 N+G+GN GIGNSG+ + N G+G+ G NT F+NAG+ N +G+ Sbjct 312 GNTGTGNFGIGNSGT---------SYNTGIGNTGQANTGFFNAGIANTGIGNTGNYNTGS 362 Query 345 VSSAGYATGGMSTAALSSGI-----LASALGSTGGLQHG 378 + + TG +T + ++G L + +G+TG + G Sbjct 363 FNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGNVNTG 401 Lambda K H 0.309 0.128 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1412885050720 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Oct 14, 2012 4:13 PM Number of letters in database: 7,218,481,314 Number of sequences in database: 21,062,489 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40