BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0446c
Length=256
Score E
Sequences producing significant alignments: (Bits) Value
gi|254230794|ref|ZP_04924121.1| hypothetical protein TBCG_00438 ... 504 5e-141
gi|15839834|ref|NP_334871.1| hypothetical protein MT0462 [Mycoba... 503 9e-141
gi|15607587|ref|NP_214960.1| transmembrane protein [Mycobacteriu... 503 1e-140
gi|289441825|ref|ZP_06431569.1| conserved membrane protein [Myco... 503 1e-140
gi|289756520|ref|ZP_06515898.1| LOW QUALITY PROTEIN: transmembra... 439 3e-121
gi|240169828|ref|ZP_04748487.1| transmembrane protein [Mycobacte... 399 2e-109
gi|183980791|ref|YP_001849082.1| transmembrane protein [Mycobact... 399 3e-109
gi|118617083|ref|YP_905415.1| transmembrane protein [Mycobacteri... 396 2e-108
gi|148821643|ref|YP_001286397.1| transmembrane protein [Mycobact... 336 2e-90
gi|289552695|ref|ZP_06441905.1| conserved membrane protein [Myco... 334 7e-90
gi|167970736|ref|ZP_02553013.1| hypothetical protein MtubH3_2295... 321 7e-86
gi|262200135|ref|YP_003271343.1| hypothetical protein Gbro_0099 ... 291 8e-77
gi|111019552|ref|YP_702524.1| hypothetical protein RHA1_ro02561 ... 287 1e-75
gi|296141260|ref|YP_003648503.1| hypothetical protein Tpau_3586 ... 280 1e-73
gi|296392460|ref|YP_003657344.1| hypothetical protein Srot_0020 ... 278 4e-73
gi|226361702|ref|YP_002779480.1| hypothetical protein ROP_22880 ... 277 1e-72
gi|229491005|ref|ZP_04384838.1| conserved hypothetical protein [... 276 2e-72
gi|226305812|ref|YP_002765772.1| hypothetical protein RER_23250 ... 275 4e-72
gi|333920776|ref|YP_004494357.1| hypothetical protein AS9A_3112 ... 256 3e-66
gi|84497728|ref|ZP_00996550.1| possible conserved transmembrane ... 249 4e-64
gi|297560225|ref|YP_003679199.1| hypothetical protein Ndas_1254 ... 239 2e-61
gi|271964424|ref|YP_003338620.1| hypothetical protein Sros_2922 ... 232 3e-59
gi|226307984|ref|YP_002767944.1| hypothetical protein RER_44970 ... 221 8e-56
gi|328880441|emb|CCA53680.1| Hypothetical protein SVEN_0393 [Str... 220 2e-55
gi|229488720|ref|ZP_04382586.1| conserved hypothetical protein [... 219 4e-55
gi|311894085|dbj|BAJ26493.1| hypothetical protein KSE_06530 [Kit... 216 2e-54
gi|290955651|ref|YP_003486833.1| hypothetical protein SCAB_10941... 216 3e-54
gi|311743513|ref|ZP_07717319.1| transmembrane protein [Aeromicro... 215 4e-54
gi|182439674|ref|YP_001827393.1| hypothetical protein SGR_5881 [... 215 6e-54
gi|320011762|gb|ADW06612.1| protein of unknown function DUF1295 ... 214 8e-54
gi|311741881|ref|ZP_07715692.1| transmembrane protein [Aeromicro... 214 9e-54
gi|326780338|ref|ZP_08239603.1| protein of unknown function DUF1... 213 2e-53
gi|239986567|ref|ZP_04707231.1| hypothetical protein SrosN1_0459... 213 2e-53
gi|119718758|ref|YP_925723.1| hypothetical protein Noca_4539 [No... 212 4e-53
gi|344998663|ref|YP_004801517.1| hypothetical protein SACTE_1051... 207 2e-51
gi|167966530|ref|ZP_02548807.1| hypothetical protein MtubH3_0006... 202 3e-50
gi|256393408|ref|YP_003114972.1| hypothetical protein Caci_4267 ... 199 4e-49
gi|116669894|ref|YP_830827.1| hypothetical protein Arth_1333 [Ar... 196 2e-48
gi|331698463|ref|YP_004334702.1| hypothetical protein Psed_4702 ... 196 4e-48
gi|258655282|ref|YP_003204438.1| hypothetical protein Namu_5181 ... 191 7e-47
gi|154253342|ref|YP_001414166.1| hypothetical protein Plav_2902 ... 188 7e-46
gi|300784853|ref|YP_003765144.1| hypothetical protein AMED_2949 ... 187 1e-45
gi|254387382|ref|ZP_05002630.1| conserved hypothetical protein [... 187 1e-45
gi|302528461|ref|ZP_07280803.1| conserved hypothetical protein [... 185 5e-45
gi|254421083|ref|ZP_05034807.1| conserved hypothetical protein [... 184 1e-44
gi|302382141|ref|YP_003817964.1| hypothetical protein Bresu_1029... 181 1e-43
gi|87198584|ref|YP_495841.1| hypothetical protein Saro_0560 [Nov... 178 6e-43
gi|318057381|ref|ZP_07976104.1| hypothetical protein SSA3_05541 ... 178 6e-43
gi|325001851|ref|ZP_08122963.1| hypothetical protein PseP1_23956... 177 2e-42
gi|291453039|ref|ZP_06592429.1| conserved hypothetical protein [... 176 3e-42
>gi|254230794|ref|ZP_04924121.1| hypothetical protein TBCG_00438 [Mycobacterium tuberculosis C]
gi|254363410|ref|ZP_04979456.1| conserved transmembrane protein [Mycobacterium tuberculosis str.
Haarlem]
gi|289744142|ref|ZP_06503520.1| transmembrane protein [Mycobacterium tuberculosis 02_1987]
31 more sequence titles
Length=260
Score = 504 bits (1298), Expect = 5e-141, Method: Compositional matrix adjust.
Identities = 256/256 (100%), Positives = 256/256 (100%), Gaps = 0/256 (0%)
Query 1 VVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL 60
VVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL
Sbjct 5 VVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL 64
Query 61 ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQL 120
ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQL
Sbjct 65 ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQL 124
Query 121 SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRH 180
SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRH
Sbjct 125 SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRH 184
Query 181 PNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQ 240
PNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQ
Sbjct 185 PNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQ 244
Query 241 RRTAYFVPRPPRSARR 256
RRTAYFVPRPPRSARR
Sbjct 245 RRTAYFVPRPPRSARR 260
>gi|15839834|ref|NP_334871.1| hypothetical protein MT0462 [Mycobacterium tuberculosis CDC1551]
gi|13879967|gb|AAK44685.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length=269
Score = 503 bits (1295), Expect = 9e-141, Method: Compositional matrix adjust.
Identities = 256/256 (100%), Positives = 256/256 (100%), Gaps = 0/256 (0%)
Query 1 VVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL 60
VVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL
Sbjct 14 VVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL 73
Query 61 ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQL 120
ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQL
Sbjct 74 ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQL 133
Query 121 SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRH 180
SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRH
Sbjct 134 SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRH 193
Query 181 PNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQ 240
PNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQ
Sbjct 194 PNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQ 253
Query 241 RRTAYFVPRPPRSARR 256
RRTAYFVPRPPRSARR
Sbjct 254 RRTAYFVPRPPRSARR 269
>gi|15607587|ref|NP_214960.1| transmembrane protein [Mycobacterium tuberculosis H37Rv]
gi|31791624|ref|NP_854117.1| transmembrane protein [Mycobacterium bovis AF2122/97]
gi|121636360|ref|YP_976583.1| putative transmembrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
21 more sequence titles
Length=256
Score = 503 bits (1295), Expect = 1e-140, Method: Compositional matrix adjust.
Identities = 255/256 (99%), Positives = 256/256 (100%), Gaps = 0/256 (0%)
Query 1 VVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL 60
+VTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL
Sbjct 1 MVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL 60
Query 61 ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQL 120
ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQL
Sbjct 61 ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQL 120
Query 121 SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRH 180
SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRH
Sbjct 121 SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRH 180
Query 181 PNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQ 240
PNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQ
Sbjct 181 PNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQ 240
Query 241 RRTAYFVPRPPRSARR 256
RRTAYFVPRPPRSARR
Sbjct 241 RRTAYFVPRPPRSARR 256
>gi|289441825|ref|ZP_06431569.1| conserved membrane protein [Mycobacterium tuberculosis T46]
gi|289568362|ref|ZP_06448589.1| conserved membrane protein [Mycobacterium tuberculosis T17]
gi|289748930|ref|ZP_06508308.1| conserved membrane protein [Mycobacterium tuberculosis T92]
gi|289414744|gb|EFD11984.1| conserved membrane protein [Mycobacterium tuberculosis T46]
gi|289542115|gb|EFD45764.1| conserved membrane protein [Mycobacterium tuberculosis T17]
gi|289689517|gb|EFD56946.1| conserved membrane protein [Mycobacterium tuberculosis T92]
Length=256
Score = 503 bits (1294), Expect = 1e-140, Method: Compositional matrix adjust.
Identities = 254/256 (99%), Positives = 256/256 (100%), Gaps = 0/256 (0%)
Query 1 VVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL 60
+VTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL
Sbjct 1 MVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL 60
Query 61 ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQL 120
ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFP+QL
Sbjct 61 ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPMQL 120
Query 121 SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRH 180
SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRH
Sbjct 121 SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRH 180
Query 181 PNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQ 240
PNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQ
Sbjct 181 PNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQ 240
Query 241 RRTAYFVPRPPRSARR 256
RRTAYFVPRPPRSARR
Sbjct 241 RRTAYFVPRPPRSARR 256
>gi|289756520|ref|ZP_06515898.1| LOW QUALITY PROTEIN: transmembrane protein [Mycobacterium tuberculosis
T85]
gi|289712084|gb|EFD76096.1| LOW QUALITY PROTEIN: transmembrane protein [Mycobacterium tuberculosis
T85]
Length=220
Score = 439 bits (1128), Expect = 3e-121, Method: Compositional matrix adjust.
Identities = 220/220 (100%), Positives = 220/220 (100%), Gaps = 0/220 (0%)
Query 37 GFVAVAVAAATLGHGDPVRRWLLLALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATP 96
GFVAVAVAAATLGHGDPVRRWLLLALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATP
Sbjct 1 GFVAVAVAAATLGHGDPVRRWLLLALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATP 60
Query 97 VQALRKVFGLQGLLTLFVSFPLQLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQL 156
VQALRKVFGLQGLLTLFVSFPLQLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQL
Sbjct 61 VQALRKVFGLQGLLTLFVSFPLQLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQL 120
Query 157 WVFKSDPANRGVIMDRGLWAWTRHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYL 216
WVFKSDPANRGVIMDRGLWAWTRHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYL
Sbjct 121 WVFKSDPANRGVIMDRGLWAWTRHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYL 180
Query 217 LVDVSGARLTERYLKGRPGFAEYQRRTAYFVPRPPRSARR 256
LVDVSGARLTERYLKGRPGFAEYQRRTAYFVPRPPRSARR
Sbjct 181 LVDVSGARLTERYLKGRPGFAEYQRRTAYFVPRPPRSARR 220
>gi|240169828|ref|ZP_04748487.1| transmembrane protein [Mycobacterium kansasii ATCC 12478]
Length=264
Score = 399 bits (1026), Expect = 2e-109, Method: Compositional matrix adjust.
Identities = 201/244 (83%), Positives = 215/244 (89%), Gaps = 0/244 (0%)
Query 13 VHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLLALVSTWGLRLSW 72
VHS F IGR +GRYNVVDV WGLGF+AVAV AA G GDP RRWLLLALV+ WGLRLSW
Sbjct 20 VHSATFLIGRWLGRYNVVDVAWGLGFIAVAVVAAVFGTGDPARRWLLLALVTVWGLRLSW 79
Query 73 HMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQLSAVTGPTPKPLL 132
HMYRKTAG+GEDPRYADLLRGAT Q +RKVFGLQ LTLF+SFPLQLSAVTGPTP+PLL
Sbjct 80 HMYRKTAGKGEDPRYADLLRGATTAQVVRKVFGLQAFLTLFISFPLQLSAVTGPTPRPLL 139
Query 133 AVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRHPNYFGDACVWWG 192
AV VG+A+WLVG+ FEA+GD QL FKSDPANRG IMDRGLWAWTRHPNYFGDACVWWG
Sbjct 140 AVTAVGVALWLVGLVFEALGDRQLRAFKSDPANRGAIMDRGLWAWTRHPNYFGDACVWWG 199
Query 193 LWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQRRTAYFVPRPPR 252
LWLITI W PL TV SPLLMTY LVDVSGARLTE+Y+KGRPGFAEYQRRTAYFVPRPPR
Sbjct 200 LWLITITGWVPLLTVVSPLLMTYFLVDVSGARLTEKYMKGRPGFAEYQRRTAYFVPRPPR 259
Query 253 SARR 256
SAR+
Sbjct 260 SARQ 263
>gi|183980791|ref|YP_001849082.1| transmembrane protein [Mycobacterium marinum M]
gi|183174117|gb|ACC39227.1| conserved transmembrane protein [Mycobacterium marinum M]
Length=264
Score = 399 bits (1024), Expect = 3e-109, Method: Compositional matrix adjust.
Identities = 199/256 (78%), Positives = 219/256 (86%), Gaps = 0/256 (0%)
Query 1 VVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL 60
+++ SA A+ VVHSV FAIG RIGRYNVVDV WGLGFVAVA +A LG GDP RRWLLL
Sbjct 8 LISGASAAALIVVHSVTFAIGHRIGRYNVVDVAWGLGFVAVAAVSAVLGSGDPTRRWLLL 67
Query 61 ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQL 120
LV+ WGLRLSWH++RKT G+GEDPRY DLLR AT Q +RKVF LQ LTLF+SFPLQL
Sbjct 68 TLVAIWGLRLSWHIHRKTVGKGEDPRYTDLLRDATLGQVVRKVFVLQAFLTLFISFPLQL 127
Query 121 SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRH 180
SAVTGPTPKPLLAVG +G+AVWL+G+ FEA+GD QL FK+DPANRG IMDRGLWAWTRH
Sbjct 128 SAVTGPTPKPLLAVGALGVAVWLLGVVFEALGDHQLRAFKADPANRGAIMDRGLWAWTRH 187
Query 181 PNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQ 240
PNYFGDACVWWGLWL+TI W PL TVGSPLLMTY LVDVSGARLTE+Y+K RPGF EYQ
Sbjct 188 PNYFGDACVWWGLWLVTITGWVPLITVGSPLLMTYFLVDVSGARLTEKYMKDRPGFGEYQ 247
Query 241 RRTAYFVPRPPRSARR 256
RRTAYFVPRPPRSAR
Sbjct 248 RRTAYFVPRPPRSARH 263
>gi|118617083|ref|YP_905415.1| transmembrane protein [Mycobacterium ulcerans Agy99]
gi|118569193|gb|ABL03944.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99]
Length=257
Score = 396 bits (1017), Expect = 2e-108, Method: Compositional matrix adjust.
Identities = 199/256 (78%), Positives = 219/256 (86%), Gaps = 0/256 (0%)
Query 1 VVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL 60
+++ SA A+ VVHSV FAIG RIGRYNVVDV WGLGFVAVA +A LG GDP RRWLLL
Sbjct 1 MISGASAAALIVVHSVTFAIGHRIGRYNVVDVAWGLGFVAVAAVSAVLGSGDPTRRWLLL 60
Query 61 ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQL 120
ALV+ WGLRLS H++RK G+GEDPRY DLLRGAT Q +RKVF LQ LTLF+SFPLQL
Sbjct 61 ALVAIWGLRLSRHIHRKRVGKGEDPRYTDLLRGATLGQVVRKVFVLQAFLTLFISFPLQL 120
Query 121 SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRH 180
SAVTGPTPKPLLAVG +G+AVWL+G+ FEA+GD QL FK+DPANRG IMDRGLWAWTRH
Sbjct 121 SAVTGPTPKPLLAVGALGVAVWLLGVVFEALGDHQLRAFKADPANRGAIMDRGLWAWTRH 180
Query 181 PNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQ 240
PNYFGDACVWWGLWL+TI W PL TVGSPLLMTY LVDVSGARLTE+Y+K RPGF EYQ
Sbjct 181 PNYFGDACVWWGLWLVTITGWVPLITVGSPLLMTYFLVDVSGARLTEKYMKDRPGFGEYQ 240
Query 241 RRTAYFVPRPPRSARR 256
RRTAYFVPRPPRSAR
Sbjct 241 RRTAYFVPRPPRSARH 256
>gi|148821643|ref|YP_001286397.1| transmembrane protein [Mycobacterium tuberculosis F11]
gi|253797371|ref|YP_003030372.1| hypothetical protein TBMG_00447 [Mycobacterium tuberculosis KZN
1435]
gi|289760562|ref|ZP_06519940.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|148720170|gb|ABR04795.1| conserved transmembrane protein [Mycobacterium tuberculosis F11]
gi|253318874|gb|ACT23477.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435]
gi|289708068|gb|EFD72084.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|328457157|gb|AEB02580.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207]
Length=178
Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 174/174 (100%), Positives = 174/174 (100%), Gaps = 0/174 (0%)
Query 1 VVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL 60
VVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL
Sbjct 5 VVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL 64
Query 61 ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQL 120
ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQL
Sbjct 65 ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQL 124
Query 121 SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGL 174
SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGL
Sbjct 125 SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGL 178
>gi|289552695|ref|ZP_06441905.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
gi|289437327|gb|EFD19820.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
gi|344218262|gb|AEM98892.1| transmembrane protein [Mycobacterium tuberculosis CTRI-2]
Length=174
Score = 334 bits (857), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 173/174 (99%), Positives = 174/174 (100%), Gaps = 0/174 (0%)
Query 1 VVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL 60
+VTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL
Sbjct 1 MVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL 60
Query 61 ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQL 120
ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQL
Sbjct 61 ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQL 120
Query 121 SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGL 174
SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGL
Sbjct 121 SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGL 174
>gi|167970736|ref|ZP_02553013.1| hypothetical protein MtubH3_22955 [Mycobacterium tuberculosis
H37Ra]
Length=160
Score = 321 bits (822), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 159/160 (99%), Positives = 160/160 (100%), Gaps = 0/160 (0%)
Query 97 VQALRKVFGLQGLLTLFVSFPLQLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQL 156
+QALRKVFGLQGLLTLFVSFPLQLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQL
Sbjct 1 MQALRKVFGLQGLLTLFVSFPLQLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQL 60
Query 157 WVFKSDPANRGVIMDRGLWAWTRHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYL 216
WVFKSDPANRGVIMDRGLWAWTRHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYL
Sbjct 61 WVFKSDPANRGVIMDRGLWAWTRHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYL 120
Query 217 LVDVSGARLTERYLKGRPGFAEYQRRTAYFVPRPPRSARR 256
LVDVSGARLTERYLKGRPGFAEYQRRTAYFVPRPPRSARR
Sbjct 121 LVDVSGARLTERYLKGRPGFAEYQRRTAYFVPRPPRSARR 160
>gi|262200135|ref|YP_003271343.1| hypothetical protein Gbro_0099 [Gordonia bronchialis DSM 43247]
gi|262083482|gb|ACY19450.1| protein of unknown function DUF1295 [Gordonia bronchialis DSM
43247]
Length=267
Score = 291 bits (744), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 145/254 (58%), Positives = 179/254 (71%), Gaps = 2/254 (0%)
Query 1 VVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL 60
V+T + + +A + +VAFAIG RIGRYNVVDVVWGLGFV VA A LG GDP RRWL
Sbjct 9 VLTVAALILLAAIQAVAFAIGHRIGRYNVVDVVWGLGFVGVAWLALLLGDGDPFRRWLFA 68
Query 61 ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLR--GATPVQALRKVFGLQGLLTLFVSFPL 118
L + WGLRLSWHM+ K+ G+GEDPRY +L G +RKVF QG+ FVS P+
Sbjct 69 ILAAVWGLRLSWHMHVKSRGKGEDPRYTAMLERAGGGTGTVIRKVFATQGISQWFVSLPI 128
Query 119 QLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWT 178
Q+SA+ GP + +G+ +WL G FEAVGD QL FK+DPAN+G IMDRGLWAWT
Sbjct 129 QVSAILGPGDGVATILLCLGIPLWLTGFAFEAVGDAQLRRFKADPANKGAIMDRGLWAWT 188
Query 179 RHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAE 238
RHPNYFGD+CVWWG++L W T+ SP+ MTY LV +GARL E+ + RPG+ E
Sbjct 189 RHPNYFGDSCVWWGIYLCAAGVWPATLTLLSPIAMTYFLVYATGARLLEQSMSKRPGYPE 248
Query 239 YQRRTAYFVPRPPR 252
YQ+RT+YF+PRPPR
Sbjct 249 YQQRTSYFLPRPPR 262
>gi|111019552|ref|YP_702524.1| hypothetical protein RHA1_ro02561 [Rhodococcus jostii RHA1]
gi|110819082|gb|ABG94366.1| possible membrane protein [Rhodococcus jostii RHA1]
Length=266
Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 149/254 (59%), Positives = 188/254 (75%), Gaps = 3/254 (1%)
Query 2 VTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLLA 61
VT+ S L +AV + F +GRRIGRYNVVDV WGLGFV VA+ AA +G GD +RRWL++
Sbjct 12 VTAASLLVLAVFQAATFLVGRRIGRYNVVDVSWGLGFVLVALVAAVIGDGDALRRWLVVV 71
Query 62 LVSTWGLRLSWHMYRKTAGQGEDPRYADLLR---GATPVQALRKVFGLQGLLTLFVSFPL 118
LV+ WGLRL+WHMY K+AG+GEDPRY ++L G +P +RK+F QGL FVS PL
Sbjct 72 LVAVWGLRLTWHMYAKSAGKGEDPRYVEMLDRAGGNSPWVVVRKIFLTQGLAQWFVSLPL 131
Query 119 QLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWT 178
Q+SAV GP VG +G +W+VG+ FEAVGD QL FK+DP+N+G IMD GLWAWT
Sbjct 132 QVSAVLGPASGLGAVVGVLGALLWVVGVVFEAVGDHQLMAFKADPSNKGEIMDVGLWAWT 191
Query 179 RHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAE 238
RHPNYFGD+CVWWGLWL+ + W TV SP++MTY LV +GARL E+ + RPG+ E
Sbjct 192 RHPNYFGDSCVWWGLWLLAASVWPGAVTVLSPVVMTYFLVFATGARLLEKSMSQRPGYPE 251
Query 239 YQRRTAYFVPRPPR 252
YQ+RT+YF+P PP+
Sbjct 252 YQQRTSYFLPLPPK 265
>gi|296141260|ref|YP_003648503.1| hypothetical protein Tpau_3586 [Tsukamurella paurometabola DSM
20162]
gi|296029394|gb|ADG80164.1| protein of unknown function DUF1295 [Tsukamurella paurometabola
DSM 20162]
Length=264
Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 154/259 (60%), Positives = 185/259 (72%), Gaps = 3/259 (1%)
Query 1 VVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL 60
VVT+ S LA+A V ++ F +GR IGRYNVVDV WG G VAVA A LG GD +R ++
Sbjct 6 VVTAWSVLALAAVQAITFTVGRAIGRYNVVDVAWGAGIVAVAWIALFLGDGDRIRGAVIT 65
Query 61 ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLR---GATPVQALRKVFGLQGLLTLFVSFP 117
A+V+ WG+RLSWHM+ K+AG+GEDPRY DLL G +RK+F +QG FVS P
Sbjct 66 AIVTVWGVRLSWHMWIKSAGKGEDPRYVDLLDRAGGGGIGTVIRKIFVVQGAAQWFVSLP 125
Query 118 LQLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAW 177
+Q+SAVTG T L V GLA +VGI FEAVGD QL VFK+DPA+RG IMDRGLWAW
Sbjct 126 VQVSAVTGSTTGVALIVAAAGLAAAVVGIGFEAVGDHQLRVFKADPAHRGAIMDRGLWAW 185
Query 178 TRHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFA 237
TRHPNYFGDAC WWG+WLI + W + TV SP LMTY LV +GARL ER++ RPG+
Sbjct 186 TRHPNYFGDACTWWGVWLIAASAWPGVLTVASPALMTYFLVHATGARLLERFMSQRPGWD 245
Query 238 EYQRRTAYFVPRPPRSARR 256
EY RT++FVP PPR RR
Sbjct 246 EYAARTSFFVPLPPRRERR 264
>gi|296392460|ref|YP_003657344.1| hypothetical protein Srot_0020 [Segniliparus rotundus DSM 44985]
gi|296179607|gb|ADG96513.1| protein of unknown function DUF1295 [Segniliparus rotundus DSM
44985]
Length=264
Score = 278 bits (712), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 144/236 (62%), Positives = 172/236 (73%), Gaps = 3/236 (1%)
Query 21 GRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLLALVSTWGLRLSWHMYRKTAG 80
GR+IGRYNVVDV WGLGF A AA +G GD RR L AL++ WGLRLSWHM+RK+AG
Sbjct 29 GRKIGRYNVVDVAWGLGFALAAAVAAAVGQGDLPRRVLFAALIALWGLRLSWHMHRKSAG 88
Query 81 QGEDPRYADLLR---GATPVQALRKVFGLQGLLTLFVSFPLQLSAVTGPTPKPLLAVGGV 137
+GEDPRY LL GA+ + +VF +QGL FVS P+QLSAV GPTP+
Sbjct 89 RGEDPRYEALLERKGGASTWNIIVQVFVIQGLAQWFVSLPVQLSAVLGPTPRAFFPALVA 148
Query 138 GLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRHPNYFGDACVWWGLWLIT 197
G+ ++ G+ FEAVGDWQL FKS+P NRG IMD GLW WTRHPNYFGD+CVWWGLWL +
Sbjct 149 GVGLYTAGVLFEAVGDWQLRAFKSNPDNRGRIMDVGLWRWTRHPNYFGDSCVWWGLWLCS 208
Query 198 INDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQRRTAYFVPRPPRS 253
+ A LATV SP LMTY LV +GARL ER++ RPG+ EYQ+RT++FVP PPRS
Sbjct 209 LACPASLATVLSPALMTYFLVHATGARLLERHMADRPGYREYQQRTSFFVPWPPRS 264
>gi|226361702|ref|YP_002779480.1| hypothetical protein ROP_22880 [Rhodococcus opacus B4]
gi|226240187|dbj|BAH50535.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=266
Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/254 (60%), Positives = 187/254 (74%), Gaps = 3/254 (1%)
Query 2 VTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLLA 61
VT S L +AV+ + +GRRIGRYNVVDV WGLGFV VA+ AA +G GD +RRWL L
Sbjct 12 VTGASLLVLAVLQAATLLVGRRIGRYNVVDVTWGLGFVLVALVAAVVGDGDALRRWLALV 71
Query 62 LVSTWGLRLSWHMYRKTAGQGEDPRYADLLR---GATPVQALRKVFGLQGLLTLFVSFPL 118
LV+ WGLRL+WHMY K+AG+GEDPRY ++L G +P +RK+F QGL FVS PL
Sbjct 72 LVAVWGLRLTWHMYVKSAGKGEDPRYEEMLDRAGGDSPGVVVRKIFLTQGLAQWFVSLPL 131
Query 119 QLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWT 178
Q+SAV GP + V +G+ +W+VG+ FE+VGD QL FK+DPAN+G IMD GLWAWT
Sbjct 132 QVSAVVGPASGFAMVVAVLGVVLWVVGVVFESVGDHQLKKFKADPANKGEIMDVGLWAWT 191
Query 179 RHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAE 238
RHPNYFGDACVWWGLWLI + W TV SP++MTY LV +GARL E+ + RPG+ E
Sbjct 192 RHPNYFGDACVWWGLWLIAASVWPGAVTVLSPVVMTYFLVFATGARLLEKSMSQRPGYPE 251
Query 239 YQRRTAYFVPRPPR 252
YQ+RT+YF+P PP+
Sbjct 252 YQQRTSYFLPLPPK 265
>gi|229491005|ref|ZP_04384838.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229322121|gb|EEN87909.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=272
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 140/256 (55%), Positives = 191/256 (75%), Gaps = 6/256 (2%)
Query 1 VVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL 60
VVT S LA+AV +V IG RIGR+NVVDV WG GFV +A+ +A +G GD RR L+L
Sbjct 16 VVTLTSLLAIAVGMAVTATIGVRIGRHNVVDVSWGAGFVLIALVSAIVGTGDLWRRLLML 75
Query 61 ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGAT---PVQALRKVFGLQGLLTLFVSFP 117
ALV+ WGLRL+ HM ++ G+GEDPRY ++L AT + A+RK++ QG+ FVS P
Sbjct 76 ALVAIWGLRLATHMAIRSRGKGEDPRYEEMLGRATGNRTLYAIRKIYLTQGISLWFVSLP 135
Query 118 LQLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAW 177
+Q++AV+ + L+ +G +A+W+VG+TFE VGD Q+ FKSDP +RG IMD+GLWAW
Sbjct 136 IQVAAVSNGSFGLLVVLG---IALWIVGVTFETVGDRQMEEFKSDPGSRGHIMDQGLWAW 192
Query 178 TRHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFA 237
TRHPNYFGDACVWWG++L++ + W + TV SP+ MTY LV +GARL ER+++ RPG+
Sbjct 193 TRHPNYFGDACVWWGIFLVSASVWPGVLTVLSPIAMTYFLVFATGARLLERHMEQRPGYR 252
Query 238 EYQRRTAYFVPRPPRS 253
EYQ+RT+YF+PRPP++
Sbjct 253 EYQQRTSYFIPRPPKA 268
>gi|226305812|ref|YP_002765772.1| hypothetical protein RER_23250 [Rhodococcus erythropolis PR4]
gi|226184929|dbj|BAH33033.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length=267
Score = 275 bits (704), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 139/256 (55%), Positives = 190/256 (75%), Gaps = 6/256 (2%)
Query 1 VVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL 60
VVT S LA+A +V IG RIGR+NVVDV WG GFV +A+ +A +G GD RR L+L
Sbjct 11 VVTLTSLLAIAFGMAVTATIGVRIGRHNVVDVSWGAGFVLIALVSAIVGTGDLWRRLLML 70
Query 61 ALVSTWGLRLSWHMYRKTAGQGEDPRYADLL---RGATPVQALRKVFGLQGLLTLFVSFP 117
ALV+ WGLRL+ HM ++ G+GEDPRY ++L G+ + ALRK++ QG+ FVS P
Sbjct 71 ALVAIWGLRLATHMAIRSRGKGEDPRYEEMLGRATGSRTLYALRKIYLTQGISLWFVSLP 130
Query 118 LQLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAW 177
+Q++AV+ + L+ +G +A+W+VG+TFE VGD Q+ FKSDP +RG IMD+GLWAW
Sbjct 131 IQVAAVSNGSFGLLVVLG---IALWIVGVTFETVGDRQMEEFKSDPGSRGHIMDQGLWAW 187
Query 178 TRHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFA 237
TRHPNYFGDACVWWG++L++ + W + TV SP+ MTY LV +GARL ER+++ RPG+
Sbjct 188 TRHPNYFGDACVWWGIFLVSASVWPGVLTVLSPIAMTYFLVFATGARLLERHMEQRPGYR 247
Query 238 EYQRRTAYFVPRPPRS 253
EYQ+RT+YF+PRPP++
Sbjct 248 EYQQRTSYFIPRPPKA 263
>gi|333920776|ref|YP_004494357.1| hypothetical protein AS9A_3112 [Amycolicicoccus subflavus DQS3-9A1]
gi|333482997|gb|AEF41557.1| hypothetical protein AS9A_3112 [Amycolicicoccus subflavus DQS3-9A1]
Length=264
Score = 256 bits (653), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 133/259 (52%), Positives = 185/259 (72%), Gaps = 6/259 (2%)
Query 1 VVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL 60
VV++ S A+AV+ +V G R+GR+NVVDV WGL FV+VA AAA G G+P RR ++L
Sbjct 6 VVSAASLAAIAVLIAVTAVAGFRVGRHNVVDVSWGLAFVSVAAAAAAAGSGEPARRLVVL 65
Query 61 ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLR---GATPVQALRKVFGLQGLLTLFVSFP 117
LV+ WG+RL+WHM+ +T G GEDPRY ++L+ G A+RK++ Q L FVS P
Sbjct 66 VLVTVWGVRLAWHMFIRTRGHGEDPRYTEMLQRGSGNPTWLAIRKIYLTQALAAWFVSLP 125
Query 118 LQLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAW 177
+Q++AV+ PL + G+ +W++G+TFEAVGD+QL FK+DPANRG +MDRGLW+W
Sbjct 126 IQVAAVSD---GPLGWIAFAGILLWIMGLTFEAVGDYQLRKFKADPANRGKVMDRGLWSW 182
Query 178 TRHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFA 237
TRHPNYFGDACVWWG++LI + W + T+ SP+LMTY L +G +L E+++ RPG+
Sbjct 183 TRHPNYFGDACVWWGIFLIAADVWPGVLTILSPVLMTYFLAFATGGKLLEKHMSERPGYR 242
Query 238 EYQRRTAYFVPRPPRSARR 256
+YQ R ++FVP PP+ R
Sbjct 243 DYQARVSFFVPLPPKRKNR 261
>gi|84497728|ref|ZP_00996550.1| possible conserved transmembrane protein [Janibacter sp. HTCC2649]
gi|84382616|gb|EAP98498.1| possible conserved transmembrane protein [Janibacter sp. HTCC2649]
Length=260
Score = 249 bits (635), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 133/258 (52%), Positives = 171/258 (67%), Gaps = 8/258 (3%)
Query 1 VVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL 60
+VT +A AVV V I RR+G+ +VVD+ WGL FV +A G R LL
Sbjct 6 LVTLSCLVAAAVVMGVTALIARRLGKVSVVDIAWGLVFVVIAWVCTFFSPG--ARSLLLA 63
Query 61 ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGATPVQ----ALRKVFGLQGLLTLFVSF 116
LV+ WG+RL+WH+ R+ G EDPRY LL A P + A+R+VF +QGL VS
Sbjct 64 VLVTVWGVRLAWHIRRRALGADEDPRYEKLLSAAPPEKRFGYAVRRVFVVQGLAAWVVSL 123
Query 117 PLQLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWA 176
PLQ++A G KPL V +G+A+++VG+ FEA+GD QL FKSDPAN+G IMDRGLWA
Sbjct 124 PLQVAAAAGA--KPLGWVAALGVALFVVGVGFEAIGDAQLARFKSDPANKGKIMDRGLWA 181
Query 177 WTRHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGF 236
WTRHPNYFGDA VWWGLW+I+ W + TV SP++MTY L +GARL E + RPG+
Sbjct 182 WTRHPNYFGDAAVWWGLWVISAEVWPAVLTVFSPVIMTYFLAFATGARLLESEMSKRPGY 241
Query 237 AEYQRRTAYFVPRPPRSA 254
+EY +RT+ F PRPPR +
Sbjct 242 SEYMQRTSMFFPRPPRQS 259
>gi|297560225|ref|YP_003679199.1| hypothetical protein Ndas_1254 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844673|gb|ADH66693.1| protein of unknown function DUF1295 [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length=267
Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/255 (53%), Positives = 167/255 (66%), Gaps = 10/255 (3%)
Query 5 VSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLLALVS 64
+SA AV + FA+ R+GR++VVD WGLGF AVA GDP R WLL L +
Sbjct 12 LSAPAVLALMLATFALALRLGRHSVVDAAWGLGFTAVAAVGVLTASGDPARSWLLAGLTA 71
Query 65 TWGLRLSWHMYRKTAGQGEDPRYADLLR---GATPVQALRKVFGLQGLLTLFVSFPLQLS 121
WG+RL+ H+ ++ G+GEDPRY LL G ALR V+ LQG L V+ P+Q +
Sbjct 72 VWGVRLAVHIGLRSRGRGEDPRYERLLDRAPGNRNAYALRVVYLLQGFLVWLVAMPVQAA 131
Query 122 AVTGP----TPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAW 177
TG +P+ LAV G AVWL+G FE VGD QL F+ DPAN G IMDRGLWAW
Sbjct 132 VHTGAPLLGSPQVWLAVAGA--AVWLLGFVFETVGDAQLARFRRDPANSGRIMDRGLWAW 189
Query 178 TRHPNYFGDACVWWGLWLITIN-DWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGF 236
TRHPNYFGDACVWWGL+L+ ++ W L T+ +P++MTYLL SG RL + ++ GRPG+
Sbjct 190 TRHPNYFGDACVWWGLFLVALSGSWWVLLTLPAPVVMTYLLTRGSGQRLLDEHMAGRPGW 249
Query 237 AEYQRRTAYFVPRPP 251
AEY RRT+ FVP PP
Sbjct 250 AEYARRTSAFVPTPP 264
>gi|271964424|ref|YP_003338620.1| hypothetical protein Sros_2922 [Streptosporangium roseum DSM
43021]
gi|270507599|gb|ACZ85877.1| conserved hypothetical protein [Streptosporangium roseum DSM
43021]
Length=264
Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/236 (51%), Positives = 159/236 (68%), Gaps = 7/236 (2%)
Query 23 RIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLLALVSTWGLRLSWHMYRKTAGQG 82
R+GR++V+DV WGLGF VA+ + GDP RR L+L L + WG+RL+ H+ R+ G+G
Sbjct 31 RVGRHSVIDVAWGLGFTVVALVSYASSGGDPARRLLVLVLTAAWGVRLAAHIGRRNIGEG 90
Query 83 EDPRYADLLR---GATPVQALRKVFGLQGLLTLFVSFPLQLSAVTGPTPKPLLAVGGVGL 139
EDPRY +L G+ + ALR V+ QG LFVS P+Q++ P PL V G+
Sbjct 91 EDPRYERMLARAPGSRTLYALRAVYLTQGAALLFVSLPVQVAMFE---PGPLGRVAWTGV 147
Query 140 AVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRHPNYFGDACVWWGLWLITIN 199
A+WLVG FE VGDWQL F++DP +RG ++D GLW +TRHPNYFGDACVWWGL+L+ +
Sbjct 148 ALWLVGAFFETVGDWQLARFRADPGSRGKVLDTGLWRYTRHPNYFGDACVWWGLFLVAAD 207
Query 200 DWAPLATVGSPLLMTYLLVDVSGARLTERYLKG-RPGFAEYQRRTAYFVPRPPRSA 254
W + TV SP+LMTY L +G + ER L G RPG+A+Y RRT+ F P PPR +
Sbjct 208 QWPGVLTVLSPVLMTYFLAGKTGKPMLERQLSGSRPGYADYVRRTSGFFPLPPRKS 263
>gi|226307984|ref|YP_002767944.1| hypothetical protein RER_44970 [Rhodococcus erythropolis PR4]
gi|226187101|dbj|BAH35205.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length=274
Score = 221 bits (563), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 120/260 (47%), Positives = 168/260 (65%), Gaps = 11/260 (4%)
Query 5 VSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAA--ATLG-HGDPVRRWLLLA 61
VSALAV V +V A+ R+ ++++D+ WG GF VAV + ++G G+ +RR ++LA
Sbjct 15 VSALAVLVFIAVVMAVAIRMNNHSIIDICWGPGFAVVAVVSYLTSIGSDGNDLRRLVVLA 74
Query 62 LVSTWGLRLSWHMYRKTAGQGEDPRYADLLR---GATPVQALRKVFGLQGLLTLFVSFPL 118
L WG+RL ++ + G G+D RY LL+ G +RK++GLQG+L L VS P+
Sbjct 75 LTVVWGMRLGLYIGFRNRGHGQDKRYTALLKHQQGPLIPFLIRKIYGLQGVLILVVSLPV 134
Query 119 QLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWT 178
Q + + L +G +G+AVW VG FE+VGD+QL FK+DPAN G++MDRGLWAWT
Sbjct 135 QFAMYEF---RALGVLGAIGIAVWTVGFVFESVGDYQLSRFKADPANSGMVMDRGLWAWT 191
Query 179 RHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPG--F 236
RHPNYFGDACVW GL+++ + D L T+ SP++M LLV SG L ER ++ G +
Sbjct 192 RHPNYFGDACVWVGLFILALGDPLALITIVSPIVMIKLLVSYSGKALLERGMRKSKGQAY 251
Query 237 AEYQRRTAYFVPRPPRSARR 256
+Y RT+ F PRPPR AR
Sbjct 252 DDYVARTSGFFPRPPRPARN 271
>gi|328880441|emb|CCA53680.1| Hypothetical protein SVEN_0393 [Streptomyces venezuelae ATCC
10712]
Length=276
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/245 (50%), Positives = 153/245 (63%), Gaps = 9/245 (3%)
Query 18 FAIGRRIGRYNVVDVVWGLGFVAVAVAA--ATLGHGDPVRRWLLLALVSTWGLRLSWHMY 75
FA+ R G + +VD+ WGL F AVAV + GHGD RR L A WGLRL+ H+
Sbjct 28 FAVAVRRGLHRIVDIAWGLAFSAVAVVTWLLSAGHGDDGRRLLAAAATVLWGLRLAAHIA 87
Query 76 RKTAGQGEDPRYADLLR---GATPVQALRKVFGLQGLLTLFVSFPLQLSAVTGPTPKPLL 132
R++ G GEDPRY LL G + ALR V+ Q L +S P+Q ++ + PL
Sbjct 88 RRSRGHGEDPRYTALLAKAPGNRTLYALRTVYLGQAALVWLISLPVQAASYSS---APLD 144
Query 133 AVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRHPNYFGDACVWWG 192
G+A+W +G+ FEAVGD QL FK DPANRG IMD+GLWAWTRHPNYFGD+ VWWG
Sbjct 145 LPAFCGIALWALGLAFEAVGDHQLACFKQDPANRGRIMDKGLWAWTRHPNYFGDSLVWWG 204
Query 193 LWLITINDWAP-LATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQRRTAYFVPRPP 251
L+++ W P L + SP+LMT LL SG RL E+++ GRPG+A Y RT+ F P PP
Sbjct 205 LYVLACTAWQPALIVLVSPVLMTALLTVGSGKRLLEKHMSGRPGYAAYAARTSGFFPLPP 264
Query 252 RSARR 256
R R
Sbjct 265 RRTAR 269
>gi|229488720|ref|ZP_04382586.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229324224|gb|EEN89979.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=274
Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/260 (46%), Positives = 167/260 (65%), Gaps = 11/260 (4%)
Query 5 VSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAA--ATLG-HGDPVRRWLLLA 61
VSALAV V +V A+ R+ ++++D+ WG GF VA + ++G G+ +RR ++LA
Sbjct 15 VSALAVLVFIAVVMAVAIRMNNHSIIDICWGPGFAVVAAVSYLTSIGSDGNDLRRLVVLA 74
Query 62 LVSTWGLRLSWHMYRKTAGQGEDPRYADLLR---GATPVQALRKVFGLQGLLTLFVSFPL 118
L WG+RL ++ + G G+D RY LL+ G +RK++GLQG+L L VS P+
Sbjct 75 LTVVWGMRLGLYIGFRNRGHGQDKRYTALLKHQQGPLVPFLIRKIYGLQGVLILVVSLPV 134
Query 119 QLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWT 178
Q + + L +G +G+AVW VG FE+VGD+QL FK+DPAN G +MDRGLWAWT
Sbjct 135 QFAMYEF---RALGVLGAIGIAVWTVGFVFESVGDYQLSRFKADPANAGKVMDRGLWAWT 191
Query 179 RHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPG--F 236
RHPNYFGDACVW GL+++ + D L T+ SP++M LLV SG L ER ++ G +
Sbjct 192 RHPNYFGDACVWVGLFILALGDPLALITIVSPIVMIKLLVSYSGKALLERGMRKSKGQAY 251
Query 237 AEYQRRTAYFVPRPPRSARR 256
+Y RT+ F+PRPPR AR
Sbjct 252 DDYVARTSGFLPRPPRPARN 271
>gi|311894085|dbj|BAJ26493.1| hypothetical protein KSE_06530 [Kitasatospora setae KM-6054]
Length=272
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/253 (53%), Positives = 163/253 (65%), Gaps = 12/253 (4%)
Query 12 VVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATL--GHGDPVRRWLLLALVSTWGLR 69
V +AFA+G R GR+ VD WGL F AVA+ L G+GD RR L ALV+ WGLR
Sbjct 19 TVMLLAFAVGLRTGRHRDVDTAWGLAFTAVALTGCGLSAGYGDDGRRALATALVTVWGLR 78
Query 70 LSWHMYRKTAGQGEDPRYADLLRGAT--PVQ---ALRKVFGLQGLLTLFVSFPLQLSAVT 124
L+ H++ + G EDPRYA +L A P + ALR V+ LQ L FV+ P+ L+A
Sbjct 79 LAAHLWWRARGLPEDPRYARMLAKAPAGPARTRYALRIVYLLQAALVWFVALPV-LAAQY 137
Query 125 GPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRHPNYF 184
PTP A G A+W VG+ FEAVGD QL FK+DPANRG +MDRGLW WTRHPNYF
Sbjct 138 QPTPPGPTAWAGT--ALWAVGLFFEAVGDAQLARFKADPANRGRVMDRGLWRWTRHPNYF 195
Query 185 GDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYL--KGRPGFAEYQRR 242
GDACVWWGL+L+ + A VGSPLLMT+LL SG + ER+L RPG+AEY R
Sbjct 196 GDACVWWGLFLLAADTPAGWLFVGSPLLMTWLLAFGSGKPMLERHLATTERPGWAEYTAR 255
Query 243 TAYFVPRPPRSAR 255
T+ F+P PPR R
Sbjct 256 TSSFLPLPPRRHR 268
>gi|290955651|ref|YP_003486833.1| hypothetical protein SCAB_10941 [Streptomyces scabiei 87.22]
gi|260645177|emb|CBG68263.1| POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN [Streptomyces scabiei
87.22]
Length=270
Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 130/258 (51%), Positives = 158/258 (62%), Gaps = 11/258 (4%)
Query 6 SALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATL----GHGDPVRRWLLLA 61
SA A V V FA+ R+G + +VD+ WGLGF VAV + GDPVRR L A
Sbjct 9 SAAAALTVMLVTFALAVRVGLHRIVDIAWGLGFTVVAVVSFAASAAQDEGDPVRRLLATA 68
Query 62 LVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGAT---PVQALRKVFGLQGLLTLFVSFPL 118
L + WGLRL+ H+ R+ G GEDPRY +L AT V ALR V+ LQG L VS P+
Sbjct 69 LTAAWGLRLAVHIARRGRGHGEDPRYEAMLAKATGNRNVYALRMVYLLQGALVWLVSLPV 128
Query 119 QLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWT 178
Q + P L A G GL W VG+ FEAVGD QL FK+ RG IMDRGLWAWT
Sbjct 129 QAAQYVPGRPSAL-AWAGAGL--WAVGLCFEAVGDAQLARFKAGAEGRGRIMDRGLWAWT 185
Query 179 RHPNYFGDACVWWGLWLITIND-WAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFA 237
RHPNYFGD CVWWGL+LI A +V SP++M+ LL+ SG RL ER++ RPG+A
Sbjct 186 RHPNYFGDFCVWWGLFLIACGSPGAAAVSVASPVVMSLLLIRGSGKRLLERHMADRPGYA 245
Query 238 EYQRRTAYFVPRPPRSAR 255
+Y RT+ F P PP+ R
Sbjct 246 DYVARTSGFFPLPPKRRR 263
>gi|311743513|ref|ZP_07717319.1| transmembrane protein [Aeromicrobium marinum DSM 15272]
gi|311312643|gb|EFQ82554.1| transmembrane protein [Aeromicrobium marinum DSM 15272]
Length=267
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 118/251 (48%), Positives = 162/251 (65%), Gaps = 10/251 (3%)
Query 10 VAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATL---GHGDPVRRWLLLALVSTW 66
V + + + R + VVD +WGLGFVAVA+A+ + G GDPV RW+LLA+ + W
Sbjct 19 VVALMTTGLLLARAQQKLTVVDTLWGLGFVAVAIASTAVSFAGDGDPVVRWILLAMTAVW 78
Query 67 GLRLSWHMYRKTAGQGEDPRYADLLRG---ATPVQALRKVFGLQGLLTLFVSFPLQLSAV 123
GLRL+ +++R+ GQ EDPRYA+L + A+ +VF QG+ V+ PL +
Sbjct 79 GLRLAIYLHRRNHGQAEDPRYAELAEADGRSFSRVAISRVFLPQGIAMFLVATPLMVGV- 137
Query 124 TGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRHPNY 183
T P+ A+ G+ VW VG+ FEAVGD QL FK+DPAN+G +MD+GLW +TRHPNY
Sbjct 138 --NTEDPVWALVVAGVVVWAVGLFFEAVGDAQLAAFKADPANKGQVMDQGLWRYTRHPNY 195
Query 184 FGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYL-KGRPGFAEYQRR 242
FGDACVW G+WL+ + W LAT SP+ MT L V+GA L E+ + K +PG+ EY RR
Sbjct 196 FGDACVWTGIWLVAASSWVGLATAISPIAMTVFLTKVTGASLNEKGMRKTKPGYEEYVRR 255
Query 243 TAYFVPRPPRS 253
T+ F+P PP+
Sbjct 256 TSGFIPLPPKK 266
>gi|182439674|ref|YP_001827393.1| hypothetical protein SGR_5881 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178468190|dbj|BAG22710.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length=267
Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 126/243 (52%), Positives = 157/243 (65%), Gaps = 9/243 (3%)
Query 16 VAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATL--GHGDPVRRWLLLALVSTWGLRLSWH 73
V FA+ R G + +VDV WG+GF AVA+ + +L G GD VRR L+ AL WGLRL+ H
Sbjct 26 VTFAVALRKGVHRIVDVAWGIGFAAVALVSYSLSAGEGDDVRRLLVTALTVIWGLRLAIH 85
Query 74 MYRKTAGQGEDPRYADLLR---GATPVQALRKVFGLQGLLTLFVSFPLQLSAVTGPTPKP 130
+ R+ G GEDPRY +L G + ALRKV+ LQG L VS P+Q + P
Sbjct 86 IGRRGKGHGEDPRYEKMLAKAPGNPQLYALRKVYLLQGALVWLVSLPVQAAQYL---TAP 142
Query 131 LLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRHPNYFGDACVW 190
L G+ +W VG+ FEA+GD QL FK+DPAN+G IMDRGLW+WTRHPNYFGD CVW
Sbjct 143 LAPWAWAGVLLWAVGLAFEAIGDAQLARFKADPANKGKIMDRGLWSWTRHPNYFGDFCVW 202
Query 191 WGLWLITIN-DWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQRRTAYFVPR 249
WGL+L A ATV +PL+M++LL SGA L ER++ RPGF Y RT+ F PR
Sbjct 203 WGLFLFVCQAPAAAAATVVAPLVMSFLLTRGSGAALLERHMADRPGFDAYVARTSGFFPR 262
Query 250 PPR 252
PPR
Sbjct 263 PPR 265
>gi|320011762|gb|ADW06612.1| protein of unknown function DUF1295 [Streptomyces flavogriseus
ATCC 33331]
Length=268
Score = 214 bits (546), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 130/244 (54%), Positives = 159/244 (66%), Gaps = 10/244 (4%)
Query 16 VAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATL---GHGDPVRRWLLLALVSTWGLRLSW 72
V F I R + +VDV WGLGF AVA+A+ + G GD RR LL L + WG+RL+
Sbjct 26 VTFLIALRKRVHRIVDVAWGLGFAAVALASYVMSADGDGDQGRRLLLTVLTAVWGVRLAV 85
Query 73 HMYRKTAGQGEDPRYADLLR---GATPVQALRKVFGLQGLLTLFVSFPLQLSAVTGPTPK 129
H+ R+ G GEDPRYA +L G + ALRKV+ LQG L +S P+Q P
Sbjct 86 HIGRRGRGHGEDPRYAAMLAKAPGHPDLYALRKVYLLQGALVWLISLPVQAGYYL---PG 142
Query 130 PLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRHPNYFGDACV 189
PL A G AVW VG+ FEAVGD QL FK DPAN+G IMDRGLW+WTRHPNYFGD CV
Sbjct 143 PLDAWAWAGAAVWAVGLAFEAVGDAQLARFKRDPANKGRIMDRGLWSWTRHPNYFGDFCV 202
Query 190 WWGLWLITINDWAPLA-TVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQRRTAYFVP 248
WWGL+L+ D A A T+ SP++M+ LL SG L ER+++GRPG+AEY RT+ F P
Sbjct 203 WWGLFLVVCADPAVAATTLVSPVVMSLLLTKGSGKALLERHMEGRPGYAEYLARTSGFFP 262
Query 249 RPPR 252
RPPR
Sbjct 263 RPPR 266
>gi|311741881|ref|ZP_07715692.1| transmembrane protein [Aeromicrobium marinum DSM 15272]
gi|311314887|gb|EFQ84793.1| transmembrane protein [Aeromicrobium marinum DSM 15272]
Length=276
Score = 214 bits (546), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 116/245 (48%), Positives = 155/245 (64%), Gaps = 11/245 (4%)
Query 16 VAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLG---HGDPVRRWLLLALVSTWGLRLSW 72
V A R+ +++D+ WG GFV VAV + + GD RR ++LAL S WGLRL
Sbjct 26 VIMAAAIRLKNQSIIDIFWGPGFVVVAVVSYLMSMGSEGDDARRLVVLALTSVWGLRLGL 85
Query 73 HMYRKTAGQGEDPRYADLLR---GATPVQALRKVFGLQGLLTLFVSFPLQLSAVTGPTPK 129
++ + G GED RY ++R GA +R+++GLQG L L VS P+Q + +
Sbjct 86 YIGNRNRGHGEDRRYTSMMRQRKGALIPFLIRRIYGLQGFLILLVSVPVQFAMYQ---SQ 142
Query 130 PLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRHPNYFGDACV 189
+ VG +G+A+WLVG TFEAVGD QL FK+DPAN G +MD GLW +TRHPNYFGDACV
Sbjct 143 AIGVVGSIGIAIWLVGFTFEAVGDAQLKRFKADPANEGKVMDGGLWKYTRHPNYFGDACV 202
Query 190 WWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPG--FAEYQRRTAYFV 247
W GL+L+ + L T+ SP++MT LLV SGA + ER +K R G + +Y RT+ F
Sbjct 203 WVGLFLLALGSPVGLITIVSPIVMTKLLVSYSGAAVLERGMKRRRGQAYEDYIARTSGFF 262
Query 248 PRPPR 252
PRPPR
Sbjct 263 PRPPR 267
>gi|326780338|ref|ZP_08239603.1| protein of unknown function DUF1295 [Streptomyces cf. griseus
XylebKG-1]
gi|326660671|gb|EGE45517.1| protein of unknown function DUF1295 [Streptomyces griseus XylebKG-1]
Length=267
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/243 (52%), Positives = 156/243 (65%), Gaps = 9/243 (3%)
Query 16 VAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATL--GHGDPVRRWLLLALVSTWGLRLSWH 73
V FA+ R G + +VDV WG+GF AVA+ + L G GD VRR L+ AL WGLRL+ H
Sbjct 26 VTFAVALRKGVHRIVDVAWGIGFAAVALVSYGLSAGEGDDVRRLLVTALTVIWGLRLAIH 85
Query 74 MYRKTAGQGEDPRYADLLR---GATPVQALRKVFGLQGLLTLFVSFPLQLSAVTGPTPKP 130
+ R+ G GEDPRY +L G + ALRKV+ LQG L VS P+Q + P
Sbjct 86 IGRRGKGHGEDPRYEKMLAKAPGNPQLYALRKVYLLQGALVWLVSLPVQAAQYL---TAP 142
Query 131 LLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRHPNYFGDACVW 190
L G+ +W VG+ FEA+GD QL FK+DPAN+G IMDRGLW+WTRHPNYFGD CVW
Sbjct 143 LAPWAWAGVLLWAVGLAFEAIGDAQLARFKADPANKGKIMDRGLWSWTRHPNYFGDFCVW 202
Query 191 WGLWLITIN-DWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQRRTAYFVPR 249
WGL+L A ATV +PL+M++LL SGA L ER++ RPGF Y RT+ F PR
Sbjct 203 WGLFLFVCQAPAAAAATVVAPLVMSFLLTRGSGAALLERHMADRPGFDAYVARTSGFFPR 262
Query 250 PPR 252
PPR
Sbjct 263 PPR 265
>gi|239986567|ref|ZP_04707231.1| hypothetical protein SrosN1_04595 [Streptomyces roseosporus NRRL
11379]
gi|291443507|ref|ZP_06582897.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291346454|gb|EFE73358.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length=267
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/245 (52%), Positives = 158/245 (65%), Gaps = 9/245 (3%)
Query 16 VAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATL--GHGDPVRRWLLLALVSTWGLRLSWH 73
V FA+ G + +VD+ WGLGF VA+ + L G GD RR L+ AL WGLRL+ H
Sbjct 26 VTFAVALNKGVHRIVDIAWGLGFAVVALVSYGLSAGVGDDGRRLLVTALTVIWGLRLAIH 85
Query 74 MYRKTAGQGEDPRYADLLR---GATPVQALRKVFGLQGLLTLFVSFPLQLSAVTGPTPKP 130
+ R+ G GEDPRYA +L G + ALRKV+ LQG L VS P+Q + P
Sbjct 86 IGRRGKGHGEDPRYAKMLAKAPGNPQLYALRKVYLLQGALVWLVSLPVQAAQYL---TAP 142
Query 131 LLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRHPNYFGDACVW 190
L G+ +W VG+ FEA+GD QL FK+DPAN+G +MDRGLW+WTRHPNYFGD CVW
Sbjct 143 LAWWAWAGVLLWAVGLAFEAIGDAQLARFKADPANKGKVMDRGLWSWTRHPNYFGDFCVW 202
Query 191 WGLWLITIN-DWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQRRTAYFVPR 249
WGL+L A ATV +PL+M++LL SGA L ER++ RPGFAEY+ RT+ F PR
Sbjct 203 WGLFLFVCQAPAAAAATVVAPLVMSFLLTKGSGAALLERHMADRPGFAEYRARTSGFFPR 262
Query 250 PPRSA 254
PPR A
Sbjct 263 PPRRA 267
>gi|119718758|ref|YP_925723.1| hypothetical protein Noca_4539 [Nocardioides sp. JS614]
gi|119539419|gb|ABL84036.1| protein of unknown function DUF1295 [Nocardioides sp. JS614]
Length=260
Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 130/254 (52%), Positives = 164/254 (65%), Gaps = 14/254 (5%)
Query 7 ALAVAV-VHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLLALVST 65
+LAVAV V +V R GR +VVDV WG+ VAVA+ A L + WLLL LV+
Sbjct 11 SLAVAVLVMTVTALAAARAGRVSVVDVAWGIALVAVALVCAVLA--GTWQSWLLLVLVAV 68
Query 66 WGLRLSWHMYRKTAGQGEDPRYADLLRGATPV----QALRKVFGLQGLLTLFVSFPLQLS 121
WG RLS H++ + G GEDPRY LL G +A+RKVF +QG VS PLQ +
Sbjct 69 WGGRLSAHIFTTSRGHGEDPRYEALLGGTLDRVGMGRAVRKVFLVQGAAVWLVSLPLQAA 128
Query 122 AVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRHP 181
A+ G + VG+AVWLVG+ FEAVGD QL ++ DP +RG ++DRGLW+WTRHP
Sbjct 129 ALAGVDWTGAI---WVGVAVWLVGVLFEAVGDAQLGAYRRDP-DRGPVLDRGLWSWTRHP 184
Query 182 NYFGDACVWWGLWLI--TINDW-APLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAE 238
NYFGDACVWWG+WL + W A LA+V SP+ MT LV ++GARL ER + RPG+ E
Sbjct 185 NYFGDACVWWGIWLAGGVASGWVAGLASVLSPVAMTIWLVWITGARLLERTMMQRPGYPE 244
Query 239 YQRRTAYFVPRPPR 252
Y RT+ FVP PP+
Sbjct 245 YAARTSMFVPLPPK 258
>gi|344998663|ref|YP_004801517.1| hypothetical protein SACTE_1051 [Streptomyces sp. SirexAA-E]
gi|344314289|gb|AEN08977.1| protein of unknown function DUF1295 [Streptomyces sp. SirexAA-E]
Length=268
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/248 (53%), Positives = 160/248 (65%), Gaps = 15/248 (6%)
Query 13 VHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATL--GHGDPVRRWLLLALVSTWGLRL 70
V V F I R+G + VVDV WGLGF AVA+ + L G GD RR L+ L WG RL
Sbjct 23 VMLVTFLIALRMGVHRVVDVAWGLGFAAVALVSYALSWGDGDGARRVLVTVLTVVWGGRL 82
Query 71 SWHMYRKTAGQGEDPRYADLLR---GATPVQALRKVFGLQGLLTLFVSFPLQLS-AVTGP 126
+ H+ R+ G GEDPRYAD+L G + ALRKV+ LQG L VS P+Q + +TGP
Sbjct 83 AVHIGRRGRGHGEDPRYADMLAKAPGDPDLYALRKVYLLQGGLVWLVSLPVQAAYHLTGP 142
Query 127 TPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRHPNYFGD 186
A G +W VG+ FEAVGD QL F+ DPAN+G IMDRGLWAWTRHPNYFGD
Sbjct 143 MGWWAWA----GTVLWAVGLGFEAVGDAQLARFRRDPANKGRIMDRGLWAWTRHPNYFGD 198
Query 187 ACVWWGLWLITINDWAPL---ATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQRRT 243
CVWWGL+LI P+ AT+ SP++M+ LL SG L ER+++GRPGFAEY+ RT
Sbjct 199 FCVWWGLFLIVCQ--VPVVAAATLVSPVVMSLLLTKGSGKALLERHMEGRPGFAEYRART 256
Query 244 AYFVPRPP 251
+ F P PP
Sbjct 257 SGFFPLPP 264
>gi|167966530|ref|ZP_02548807.1| hypothetical protein MtubH3_00067 [Mycobacterium tuberculosis
H37Ra]
Length=100
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 97/98 (99%), Positives = 97/98 (99%), Gaps = 0/98 (0%)
Query 159 FKSDPANRGVIMDRGLWAWTRHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLV 218
KSDPANRGVIMDRGLWAWTRHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLV
Sbjct 3 IKSDPANRGVIMDRGLWAWTRHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLV 62
Query 219 DVSGARLTERYLKGRPGFAEYQRRTAYFVPRPPRSARR 256
DVSGARLTERYLKGRPGFAEYQRRTAYFVPRPPRSARR
Sbjct 63 DVSGARLTERYLKGRPGFAEYQRRTAYFVPRPPRSARR 100
>gi|256393408|ref|YP_003114972.1| hypothetical protein Caci_4267 [Catenulispora acidiphila DSM
44928]
gi|256359634|gb|ACU73131.1| protein of unknown function DUF1295 [Catenulispora acidiphila
DSM 44928]
Length=275
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/244 (49%), Positives = 148/244 (61%), Gaps = 6/244 (2%)
Query 15 SVAFAIGRRIGRYNVVDVVWGLGFV--AVAVAAATLGHGDPVRRWLLLALVSTWGLRLSW 72
S F G R+ VD VWG F AV AA T HGD RRWLL WGLRLS
Sbjct 25 SAVFVAGVARQRHRYVDAVWGSAFALAAVVTAAMTTEHGDGWRRWLLTLCTIVWGLRLSI 84
Query 73 HMYRKTAGQGEDPRYADLL---RGATPVQALRKVFGLQGLLTLFVSFPLQLSAVTGPTPK 129
H+ R+ G EDPRYA +L RG + A KV+ LQ +L F+S P+Q+ V
Sbjct 85 HIARRGWGAPEDPRYAAMLGKARGNPTLVAYTKVYLLQAVLVWFISLPVQVGLVATGGSA 144
Query 130 PLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRHPNYFGDACV 189
+ +GL +WL+GI+FEA GD+QL FK+DPAN G +M GLW +TRHPNYFGDACV
Sbjct 145 WGVTPAVIGLLLWLLGISFEATGDYQLARFKADPANHGRLMSEGLWRYTRHPNYFGDACV 204
Query 190 WWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKG-RPGFAEYQRRTAYFVP 248
WWGL+LI W T+ SP LMT+LL SG + E +L RPG+A+Y RT+ F+P
Sbjct 205 WWGLFLIGAAAWPVPLTILSPALMTWLLTSGSGKPMVEAHLTNTRPGYADYVARTSGFIP 264
Query 249 RPPR 252
RPP+
Sbjct 265 RPPK 268
>gi|116669894|ref|YP_830827.1| hypothetical protein Arth_1333 [Arthrobacter sp. FB24]
gi|116610003|gb|ABK02727.1| protein of unknown function DUF1295 [Arthrobacter sp. FB24]
Length=270
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/252 (48%), Positives = 155/252 (62%), Gaps = 8/252 (3%)
Query 6 SALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATL--GHGDPVRRWLLLALV 63
+ALAVA V +V FA+ R++V+DV WG GFVAVA + L G GD RR LLL L
Sbjct 16 TALAVASVLAVTFAVAVAQRRHSVMDVAWGPGFVAVAAVSWLLSAGTGDDGRRLLLLLLT 75
Query 64 STWGLRLSWHMYRKTAGQGEDPRYADLLR---GATPVQALRKVFGLQGLLTLFVSFPLQL 120
WGLRL H+ + G EDPRY +L G+ V ALR+V+ QG++ LFVS +Q+
Sbjct 76 GVWGLRLGAHIGWRARGGHEDPRYEAMLSDAPGSRNVYALRRVYLPQGMVMLFVSLTVQV 135
Query 121 SAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRH 180
P V +G+ +W+VG FE VGDWQL FK DP+ +G +++ GLW +TRH
Sbjct 136 GMFATGAPG---WVAILGVVLWVVGFVFETVGDWQLTQFKKDPSRKGTVLNTGLWRYTRH 192
Query 181 PNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQ 240
PNYFGDA VW GL+LI + W + TV SP LM + L +G LTE+ + RPG+ EY
Sbjct 193 PNYFGDAAVWTGLFLIAADSWPGILTVLSPALMVWALAGKTGKPLTEKAMSARPGYKEYV 252
Query 241 RRTAYFVPRPPR 252
T+ FVP PPR
Sbjct 253 ESTSGFVPWPPR 264
>gi|331698463|ref|YP_004334702.1| hypothetical protein Psed_4702 [Pseudonocardia dioxanivorans
CB1190]
gi|326953152|gb|AEA26849.1| protein of unknown function DUF1295 [Pseudonocardia dioxanivorans
CB1190]
Length=277
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/240 (45%), Positives = 146/240 (61%), Gaps = 6/240 (2%)
Query 23 RIGRYNVVDVVWGLGFVAVAVAAATL--GHGDPVRRWLLLALVSTWGLRLSWHMYRKTAG 80
R GR++ +DVVWG GF VA+ + G G+ RRWL AL WGLRL+WH+ R+ G
Sbjct 37 RGGRHDGIDVVWGAGFAVVALVTLVMSAGDGETWRRWLTTALTVVWGLRLAWHIGRRNHG 96
Query 81 QGEDPRYADLLR---GATPVQALRKVFGLQGLLTLFVSFPLQLSAVTGPTPKPLLAVGGV 137
+ ED RY L+ G V A +++ QG++ VS P+QL+ +
Sbjct 97 KPEDQRYVALMSRAPGNPYVYAFTRIYLTQGVVMWVVSLPVQLAQYGTGGGLLGTVTAVL 156
Query 138 GLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRHPNYFGDACVWWGLWLIT 197
G+ W VG FE VGD QL F +DP N+G ++DRGLW +TRHPNYFGDA VWWGL L+
Sbjct 157 GVLSWCVGFFFETVGDAQLARFTADPGNKGTVLDRGLWRYTRHPNYFGDAAVWWGLTLLG 216
Query 198 INDWAPLATVGSPLLMTYLLVDVSGARLTERYL-KGRPGFAEYQRRTAYFVPRPPRSARR 256
++ L + S +MT+LLV +GA+L E + + RPG+A+Y RRT+ F+PRPPR R
Sbjct 217 LHQLPGLVGLASAAIMTFLLVRGTGAKLLESSIGERRPGYADYVRRTSGFIPRPPREPAR 276
>gi|258655282|ref|YP_003204438.1| hypothetical protein Namu_5181 [Nakamurella multipartita DSM
44233]
gi|258558507|gb|ACV81449.1| protein of unknown function DUF1295 [Nakamurella multipartita
DSM 44233]
Length=293
Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 117/245 (48%), Positives = 152/245 (63%), Gaps = 16/245 (6%)
Query 17 AFAIGRRIGRYNVVDVVWGLGFVAVA---------VAAATLGH--GDPVRRWLLLALVST 65
+F GR G+Y+V+D WG GF A+A VA ++ G GD R L+L +V
Sbjct 22 SFLAGRVTGKYSVIDAAWGPGFAAIALVTFVVSGLVAGSSAGQSPGDGTLRLLVLGMVVV 81
Query 66 WGLRLSWHMYRKTAGQGEDPRYADLLRGAT-PVQALRKVFGLQGLLTLFVSFPLQLSAVT 124
WGLRL ++ + G+ EDPRYA++L A P +RKV QG+ FVS P+Q++ V
Sbjct 82 WGLRLGTYILIRNHGKPEDPRYAEMLADAGGPGVIVRKVQLPQGVTMWFVSLPVQVAMVL 141
Query 125 GPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRHPNYF 184
P P + VGLAV+LVG+ FE VGD QL F DPAN+G +MDRGLW +TRHPNYF
Sbjct 142 ---PGPAGPIIWVGLAVYLVGLVFETVGDAQLAAFTRDPANKGKLMDRGLWRYTRHPNYF 198
Query 185 GDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYL-KGRPGFAEYQRRT 243
GDACVW G++L W TV SP LM +LLV +G LTER + + RPG+A+Y RT
Sbjct 199 GDACVWVGIFLTVTWSWWGWLTVLSPALMIWLLVAKTGKALTERRMSQSRPGYADYVART 258
Query 244 AYFVP 248
+ FVP
Sbjct 259 SGFVP 263
>gi|154253342|ref|YP_001414166.1| hypothetical protein Plav_2902 [Parvibaculum lavamentivorans
DS-1]
gi|154157292|gb|ABS64509.1| protein of unknown function DUF1295 [Parvibaculum lavamentivorans
DS-1]
Length=264
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 111/229 (49%), Positives = 141/229 (62%), Gaps = 6/229 (2%)
Query 29 VVDVVWGLGFVAVAVAAATLGHGDPVRRWLLLALVSTWGLRLSWHMY-RKTAGQGEDPRY 87
+VD+ WGLGFV +A+A +L G R L+ L + WGLRL+ H+Y R ED RY
Sbjct 34 IVDIFWGLGFVIIALATWSLNPGYSTRAALIAGLTALWGLRLAGHLYLRWRREASEDRRY 93
Query 88 ADLLRGATPV---QALRKVFGLQGLLTLFVSFPLQLSAVTGPTPKPLLAVGGVGLAVWLV 144
A + P ++L VFGLQ + VS P+Q + TP L +G + L
Sbjct 94 AAMRAKRGPSFWWKSLYIVFGLQAAIMFAVSLPVQF-GIMAETPGRLTLADVLGTVLVLT 152
Query 145 GITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRHPNYFGDACVWWGLWLITINDWAPL 204
G+ FEA+GD QL FK+DPANRG +MDRGLWAWTRHPNYFGDA VWWGL++I + A
Sbjct 153 GLAFEAIGDAQLTAFKADPANRGKVMDRGLWAWTRHPNYFGDAVVWWGLFIIAASSPALW 212
Query 205 ATVGSPLLMTYLLVDVSGARLTERYL-KGRPGFAEYQRRTAYFVPRPPR 252
T P LMT+ LV+VSG L ER L K RPG+ +Y RT+ F+P PPR
Sbjct 213 WTAIGPALMTWFLVNVSGKALLERGLRKSRPGYDDYVWRTSGFIPLPPR 261
>gi|300784853|ref|YP_003765144.1| hypothetical protein AMED_2949 [Amycolatopsis mediterranei U32]
gi|299794367|gb|ADJ44742.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340526282|gb|AEK41487.1| hypothetical protein RAM_14995 [Amycolatopsis mediterranei S699]
Length=255
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/237 (44%), Positives = 147/237 (63%), Gaps = 7/237 (2%)
Query 18 FAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLLALVSTWGLRLSWHMYRK 77
F I R RY+ +D WGLGF VA+AA G G R +++ L WG+RLS H++ +
Sbjct 21 FGIARARKRYDTIDTFWGLGFAIVALAAFPFGDGPLPLRLVVVLLTVVWGVRLSVHLHLR 80
Query 78 TAGQGEDPRYADLLRGATPVQALRKVFGLQGLLTLFVSFPLQLSAVTGPTPKPLLAVGGV 137
EDPRYA + G P++ +V+ Q ++ FVS P+Q AV G + +G +
Sbjct 81 NHKLPEDPRYARM--GHRPLKMFLRVYLFQAVVLYFVSLPVQF-AVDGTG---IGVLGWL 134
Query 138 GLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRHPNYFGDACVWWGLWLIT 197
G+AVW+VG FE +GD QL FK+DPA++G ++D GLW +TRHPNYFGDACVWWGL+L+
Sbjct 135 GVAVWVVGFAFETIGDDQLRRFKADPASKGKVLDTGLWRYTRHPNYFGDACVWWGLYLLA 194
Query 198 INDWAPLATVGSPLLMTYLLVDVSGARLTERYL-KGRPGFAEYQRRTAYFVPRPPRS 253
+ W AT+ SP+ MT+ L +G + E+ + + RP +A Y RT+ F P PP+
Sbjct 195 CSTWPGAATILSPVAMTFTLARGTGKPMLEKGMARTRPAYAHYVERTSGFFPLPPKK 251
>gi|254387382|ref|ZP_05002630.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194346175|gb|EDX27141.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length=266
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/244 (46%), Positives = 152/244 (63%), Gaps = 9/244 (3%)
Query 16 VAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATL--GHGDPVRRWLLLALVSTWGLRLSWH 73
+ F++ G + + D+ GL F AVA A L G+G+ RR L+ A WG+RL+ H
Sbjct 18 ITFSVALIRGLHRLADIARGLAFAAVAAATYGLSEGYGNDGRRLLVAAATLLWGVRLAAH 77
Query 74 MYRKTAGQGEDPRYADLL---RGATPVQALRKVFGLQGLLTLFVSFPLQLSAVTGPTPKP 130
+ + GQGEDPRYA+LL RG ++ALRKV L+ L VS P+Q ++ P
Sbjct 78 IAWRCRGQGEDPRYAELLAHGRGDPDLRALRKVHLLRAGLVWLVSLPVQAASYVA---AP 134
Query 131 LLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRHPNYFGDACVW 190
+ A+ +G +W G+ FEAVGD QL FK+DPA+ G +MDRGLWAWTRHPN+FGD VW
Sbjct 135 IGALTVLGAVLWAAGLAFEAVGDHQLARFKADPAHHGTVMDRGLWAWTRHPNHFGDFLVW 194
Query 191 WGLWLITINDW-APLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQRRTAYFVPR 249
WGL+L+ W L ++ SP+ MT LL + SG RL ++ RPG+A Y RT+ F+PR
Sbjct 195 WGLYLMACGTWQTALLSLVSPVAMTLLLTEGSGKRLLVAHMADRPGYAAYAARTSGFIPR 254
Query 250 PPRS 253
PPR
Sbjct 255 PPRD 258
>gi|302528461|ref|ZP_07280803.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302437356|gb|EFL09172.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length=265
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/257 (42%), Positives = 152/257 (60%), Gaps = 12/257 (4%)
Query 1 VVTSVSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLL 60
+ V+ LAV ++ F I R RY+ +D WGLGF VAV + G G R
Sbjct 13 LTAGVTLLAV----TLTFGIARLRRRYDTIDTFWGLGFALVAVVSFPFGTGPLALRLTTA 68
Query 61 ALVSTWGLRLSWHMYRKTAGQGEDPRYADLLR--GATP-VQALRKVFGLQGLLTLFVSFP 117
AL WG+RL+ H++ + G+ EDPRY ++ GA P + + + +Q + FVS P
Sbjct 69 ALTVVWGVRLAVHLHLRNRGKPEDPRYQQIVERAGANPGFRIFVRTYLMQAAVLWFVSLP 128
Query 118 LQLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAW 177
+Q A++G K +G+ WLVG FE VGD QL F+++PANRG ++D GLW +
Sbjct 129 VQF-AMSG---KGFGLTAWLGVLGWLVGFAFETVGDEQLRRFRANPANRGQVLDTGLWRY 184
Query 178 TRHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKG-RPGF 236
TRHPNYFGDACVWWGL+L+ + W AT+ SP+ MT+ L +G + E+ L+ RPG+
Sbjct 185 TRHPNYFGDACVWWGLYLLACSTWPGAATILSPVAMTFTLARGTGKPMLEKGLRQTRPGY 244
Query 237 AEYQRRTAYFVPRPPRS 253
A+Y RT+ F P PP+
Sbjct 245 ADYIARTSGFFPLPPKK 261
>gi|254421083|ref|ZP_05034807.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
gi|196187260|gb|EDX82236.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
Length=270
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/259 (41%), Positives = 150/259 (58%), Gaps = 13/259 (5%)
Query 7 ALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLLALVSTW 66
AL VAV+ + + + ++ + +D VW LG + +A+A GDP R+ LL+ L + W
Sbjct 15 ALIVAVMLGL-WLVALKLKDVSFIDAVWPLGMLLLALATLPRAEGDPARKGLLVGLCAVW 73
Query 67 GLRLSWHMYRKTAGQGEDPRYADLLRGATPVQ-------ALRKVFGLQGLLTLFVSFPLQ 119
LRL WH++R+ G D RY ++ AL VF Q +L S P+Q
Sbjct 74 ALRLGWHLFRRWRASGADGRYVQIVEDQEKSHGWSFGKTALLFVFLPQAVLAWLTSLPVQ 133
Query 120 LSAVTGPTPKPLLAV-GGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWT 178
+ V +P L V G+G + +VGI FE+VGD QL FK DPAN+G ++D GLW +T
Sbjct 134 MGQVAA---QPGLGVMAGLGAVLAVVGIVFESVGDAQLAAFKRDPANKGKVLDTGLWRYT 190
Query 179 RHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYL-KGRPGFA 237
RHPNYFGDACVWWGLWLI L ++ P+ +T+ L SG +TE+ + + RPG+A
Sbjct 191 RHPNYFGDACVWWGLWLIAAETGVGLWSIAGPIFLTFTLTRWSGIGITEKAINRSRPGYA 250
Query 238 EYQRRTAYFVPRPPRSARR 256
+Y +RT+ FVP PP R
Sbjct 251 DYVKRTSAFVPWPPSRHPR 269
>gi|302382141|ref|YP_003817964.1| hypothetical protein Bresu_1029 [Brevundimonas subvibrioides
ATCC 15264]
gi|302192769|gb|ADL00341.1| protein of unknown function DUF1295 [Brevundimonas subvibrioides
ATCC 15264]
Length=268
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/240 (42%), Positives = 140/240 (59%), Gaps = 11/240 (4%)
Query 23 RIGRYNVVDVVWGLGFVAVAVAAATLGHGDPVRRWLLLALVSTWGLRLSWHMYRKTAGQG 82
R+ + +D VW LG + +A+ GDPVR+ LLL L + W +RL WH+ + G G
Sbjct 30 RLKDVSFIDGVWPLGMLFLALITFPRTDGDPVRKGLLLWLCAVWAIRLGWHLLHRWRGHG 89
Query 83 EDPRYADLLRGATPVQ-------ALRKVFGLQGLLTLFVSFPLQLSAVTGPTPKPLLAVG 135
D RY D++ AL VF Q L P+QL V+ P P + A+G
Sbjct 90 ADGRYTDIVEHQEKNHGWSFGKTALLFVFLPQAFLAWLTCLPVQLGQVS-PVPA-MGAIG 147
Query 136 GVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRHPNYFGDACVWWGLWL 195
+G + +VGI FE++GD QL F+ DP N+G ++D GLW +TRHPNYFGDACVWWGLWL
Sbjct 148 WIGAVIVVVGIAFESIGDAQLSAFRKDPKNKGKVLDTGLWRYTRHPNYFGDACVWWGLWL 207
Query 196 ITIND-WAPLATVGSPLLMTYLLVDVSGARLTERYL-KGRPGFAEYQRRTAYFVPRPPRS 253
I W +A+V P+ +T+ L SG +TE+ K +P +A+Y RRT+ F+P PP+
Sbjct 208 IAAETGWIGIASVLGPVFLTFTLTKWSGIGITEKSTAKTKPQYADYIRRTSAFIPMPPKK 267
>gi|87198584|ref|YP_495841.1| hypothetical protein Saro_0560 [Novosphingobium aromaticivorans
DSM 12444]
gi|87134265|gb|ABD25007.1| protein of unknown function DUF1295 [Novosphingobium aromaticivorans
DSM 12444]
Length=265
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 109/240 (46%), Positives = 143/240 (60%), Gaps = 9/240 (3%)
Query 23 RIGRYNVVDVVWGLGFVAVAVAAATLGHGDP-VRRWLLLALVSTWGLRLSWHMYRKTAGQ 81
RI + +D VWG G +A+ + G P VR L+ A+ + W RL+WH+Y +
Sbjct 25 RIDDVSFIDAVWGGGMGVLALVSWLHVPGGPGVRAHLIAAMAAIWAARLAWHLYTRWRAN 84
Query 82 GEDPRYADLL-----RGATPVQALRKVFGLQGLLTLFVSFPLQLSAVTGPTPKPLLAVGG 136
GEDPRYA +L RG AL+ VF Q +L P QL + P PL +
Sbjct 85 GEDPRYARILGKARARGQYGSAALKVVFAPQAVLLFLTCLPAQLGVLASTAPAPLGPLAV 144
Query 137 VGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRHPNYFGDACVWWGLWLI 196
G AVWLVGI FEAVGD QL F +DPA++G ++D GLW +TRHPNYFGDACVWWG+WL
Sbjct 145 AGAAVWLVGILFEAVGDEQLKRFLADPASKGKVLDTGLWRFTRHPNYFGDACVWWGIWLA 204
Query 197 TIND--WAPLATVGSPLLMTYLLVDVSGARLTERYL-KGRPGFAEYQRRTAYFVPRPPRS 253
+ W LA++ P+ +T+ L SG L ER + + RPG+AEY RRT+ FVP P+S
Sbjct 205 AADAGLWVALASLVGPVFLTFTLTRWSGKPLLERGMAERRPGYAEYVRRTSGFVPWWPKS 264
>gi|318057381|ref|ZP_07976104.1| hypothetical protein SSA3_05541 [Streptomyces sp. SA3_actG]
gi|318078177|ref|ZP_07985509.1| hypothetical protein SSA3_16015 [Streptomyces sp. SA3_actF]
Length=290
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 118/265 (45%), Positives = 147/265 (56%), Gaps = 27/265 (10%)
Query 11 AVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAA-----------ATLGHGDPVRRWLL 59
A+V + + RR G Y VD WG F +A + + G GDPVR L
Sbjct 20 ALVLGATWLLSRRRGIYRYVDSAWGFAFAFLAAVSWLFAYGSQGTDGSRGLGDPVRAGLA 79
Query 60 LALVSTWGLRLSWHMYRKTAGQGEDPRYADLLRGA-----TPVQALRKVFGLQGLLTLFV 114
AL WGLRL H+ R+ G+GEDPRY +L A P ALR V Q L V
Sbjct 80 AALTIVWGLRLGVHIARRGRGKGEDPRYDRMLSKAPEGAPRPRYALRVVTLPQAALVWLV 139
Query 115 SFPLQLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGL 174
S P+Q + + P V G+A+W +G+ FEAVGD Q+ FKSDPA++G ++D GL
Sbjct 140 SVPVQAAVLL---PYGTWWVTWAGVALWALGLFFEAVGDAQMARFKSDPAHKGKLIDVGL 196
Query 175 WAWTRHPNYFGDACVWWGLWLITI--------NDWAPLATVGSPLLMTYLLVDVSGARLT 226
W WTRHPNYFGD VWWGLWL+T+ AT+ SPLLMTYLLV SG RLT
Sbjct 197 WRWTRHPNYFGDFAVWWGLWLLTLPAAGAPAAAWGPAAATLVSPLLMTYLLVFGSGKRLT 256
Query 227 ERYLKGRPGFAEYQRRTAYFVPRPP 251
ER + R G+ Y RT+ F+P PP
Sbjct 257 ERGMAEREGWERYAARTSGFLPWPP 281
>gi|325001851|ref|ZP_08122963.1| hypothetical protein PseP1_23956 [Pseudonocardia sp. P1]
Length=276
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/251 (47%), Positives = 154/251 (62%), Gaps = 10/251 (3%)
Query 5 VSALAVAVVHSVAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLG-----HGDPVRRWLL 59
V+ AV V+ VA A+G R GR++ VDVVWGLGFV +A+ +A GD RR L+
Sbjct 15 VTLAAVLVLMVVALAVGVRRGRHDGVDVVWGLGFVLIALVSAVTATLLDPSGDAWRRVLV 74
Query 60 LALVSTWGLRLSWHMYRKTAGQGEDPRYADLLR---GATPVQALRKVFGLQGLLTLFVSF 116
+ LV+ WG RL+ H+ R+ G+ ED RY DLL G A RKV+ QG + VS
Sbjct 75 VVLVTVWGGRLARHIARRNHGKPEDRRYVDLLARAPGNPAAYAFRKVYLTQGAVMWVVSL 134
Query 117 PLQLSAVTGPTPKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWA 176
P+Q+ A G + V +G+ VW VG FEAVGD QL F +DPA+RG ++D GLW
Sbjct 135 PVQI-APYGAVGTWGVVVTVLGMLVWAVGFGFEAVGDAQLARFTADPAHRGEVLDSGLWR 193
Query 177 WTRHPNYFGDACVWWGLWLITINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKG-RPG 235
+TRHPNYFGDACVWWGL ++ + A L + ++T LV +GA L ER + RPG
Sbjct 194 YTRHPNYFGDACVWWGLGILALAHPAGLIGLVGVAVITANLVKGTGAALLERDIADRRPG 253
Query 236 FAEYQRRTAYF 246
+A+Y RRT+ F
Sbjct 254 YADYVRRTSGF 264
>gi|291453039|ref|ZP_06592429.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|291355988|gb|EFE82890.1| conserved hypothetical protein [Streptomyces albus J1074]
Length=268
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/245 (49%), Positives = 150/245 (62%), Gaps = 12/245 (4%)
Query 16 VAFAIGRRIGRYNVVDVVWGLGFVAVAVAAATLGH-----GDPVRRWLLLALVSTWGLRL 70
V FA+ R G + +VDV WG F AVA+ + GD L AL WGLRL
Sbjct 24 VTFALALRKGVHRIVDVAWGAAFAAVALTSYAFSRTRPDPGDTTLALLATALTCAWGLRL 83
Query 71 SWHMYRKTAGQGEDPRYADLLR---GATPVQALRKVFGLQGLLTLFVSFPLQLSAVTGPT 127
+ H+ R+ G GEDPRYA +L G+ A RKV+ LQG L VS P+Q +A+
Sbjct 84 AVHIGRRGRGHGEDPRYARMLAKAPGSPAAYAFRKVYLLQGALVWLVSLPVQ-AAMYVRE 142
Query 128 PKPLLAVGGVGLAVWLVGITFEAVGDWQLWVFKSDPANRGVIMDRGLWAWTRHPNYFGDA 187
P +LAV G +W VG+ FEA+GD QL FK+DPAN+G IMDRGLW+WTRHPNYFGD
Sbjct 143 PVGVLAV--CGAVLWAVGVAFEAIGDRQLARFKADPANKGKIMDRGLWSWTRHPNYFGDF 200
Query 188 CVWWGLWLI-TINDWAPLATVGSPLLMTYLLVDVSGARLTERYLKGRPGFAEYQRRTAYF 246
VWWGL+L+ AT+ SPL+M+ LL+ SG L ER++ RPG+A Y+ RT+ F
Sbjct 201 LVWWGLFLLVCAAPPVAAATLVSPLVMSALLIFGSGKALLERHMAERPGYAAYRARTSGF 260
Query 247 VPRPP 251
P PP
Sbjct 261 FPLPP 265
Lambda K H
0.326 0.141 0.469
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 377837056800
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40