BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0451c
Length=140
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607592|ref|NP_214965.1| membrane protein [Mycobacterium tub... 288 2e-76
gi|240169833|ref|ZP_04748492.1| membrane protein MmpS4_2 [Mycoba... 242 1e-62
gi|183980796|ref|YP_001849087.1| membrane protein MmpS4_2 [Mycob... 226 7e-58
gi|333992658|ref|YP_004525272.1| hypothetical protein JDM601_401... 219 2e-55
gi|15828277|ref|NP_302540.1| small membrane protein [Mycobacteri... 202 1e-50
gi|183980130|ref|YP_001848421.1| membrane protein MmpS5_3 [Mycob... 192 2e-47
gi|118473924|ref|YP_884793.1| MmpS4 protein [Mycobacterium smegm... 189 1e-46
gi|5524339|gb|AAD44232.1|AF143772_38 TmtpA [Mycobacterium avium] 178 2e-43
gi|254819607|ref|ZP_05224608.1| MmpS4 protein [Mycobacterium int... 178 2e-43
gi|41407339|ref|NP_960175.1| MmpS4 [Mycobacterium avium subsp. p... 177 3e-43
gi|118470714|ref|YP_887799.1| MmpS5 protein [Mycobacterium smegm... 175 2e-42
gi|118471113|ref|YP_884641.1| MmpS5 protein [Mycobacterium smegm... 175 2e-42
gi|146760117|emb|CAJ77679.1| mmps4 protein [Mycobacterium chelonae] 174 4e-42
gi|342858823|ref|ZP_08715478.1| MmpS4 protein [Mycobacterium col... 173 7e-42
gi|169631195|ref|YP_001704844.1| MmpS family protein [Mycobacter... 173 8e-42
gi|183980798|ref|YP_001849089.1| hypothetical protein MMAR_0774 ... 172 1e-41
gi|169630231|ref|YP_001703880.1| MmpS family protein [Mycobacter... 169 9e-41
gi|169631778|ref|YP_001705427.1| membrane protein MmpS [Mycobact... 168 3e-40
gi|240169835|ref|ZP_04748494.1| hypothetical protein MkanA1_1100... 166 1e-39
gi|296164400|ref|ZP_06846975.1| MmpS family membrane protein [My... 159 9e-38
gi|118617881|ref|YP_906213.1| membrane protein MmpS4 [Mycobacter... 152 1e-35
gi|118465434|ref|YP_883027.1| MmpS4 protein [Mycobacterium avium... 152 1e-35
gi|169629386|ref|YP_001703035.1| putative membrane protein MmpS ... 149 1e-34
gi|254776285|ref|ZP_05217801.1| MmpS4 protein [Mycobacterium avi... 149 1e-34
gi|240172076|ref|ZP_04750735.1| hypothetical protein MkanA1_2236... 149 1e-34
gi|15607817|ref|NP_215191.1| hypothetical protein Rv0677c [Mycob... 149 2e-34
gi|169628228|ref|YP_001701877.1| membrane protein MmpS [Mycobact... 148 3e-34
gi|183983169|ref|YP_001851460.1| membrane protein MmpS4 [Mycobac... 143 7e-33
gi|254820444|ref|ZP_05225445.1| hypothetical protein MintA_10976... 143 1e-32
gi|240171020|ref|ZP_04749679.1| hypothetical protein MkanA1_1704... 143 1e-32
gi|118616542|ref|YP_904874.1| transmembrane proteinm, MmpS5 [Myc... 143 1e-32
gi|254818587|ref|ZP_05223588.1| membrane protein MmpS1 [Mycobact... 142 2e-32
gi|31792741|ref|NP_855234.1| membrane protein [Mycobacterium bov... 142 2e-32
gi|296165068|ref|ZP_06847621.1| MmpS family membrane protein [My... 142 2e-32
gi|339631627|ref|YP_004723269.1| hypothetical protein MAF_15830 ... 141 3e-32
gi|183981710|ref|YP_001850001.1| hypothetical protein MMAR_1696 ... 139 1e-31
gi|118462696|ref|YP_881703.1| MmpS5 protein [Mycobacterium avium... 139 1e-31
gi|41407835|ref|NP_960671.1| MmpS5 [Mycobacterium avium subsp. p... 139 1e-31
gi|120404792|ref|YP_954621.1| hypothetical protein Mvan_3834 [My... 139 2e-31
gi|254820611|ref|ZP_05225612.1| MmpS5 protein [Mycobacterium int... 138 3e-31
gi|183981736|ref|YP_001850027.1| membrane protein MmpS1 [Mycobac... 138 3e-31
gi|118617529|ref|YP_905861.1| hypothetical protein MUL_1935 [Myc... 137 4e-31
gi|108802138|ref|YP_642335.1| hypothetical protein Mmcs_5175 [My... 137 5e-31
gi|120404167|ref|YP_953996.1| hypothetical protein Mvan_3188 [My... 137 6e-31
gi|240172456|ref|ZP_04751115.1| membrane transporter [Mycobacter... 137 8e-31
gi|333991846|ref|YP_004524460.1| hypothetical protein JDM601_320... 136 9e-31
gi|296171261|ref|ZP_06852665.1| MmpS family membrane protein [My... 136 1e-30
gi|342858162|ref|ZP_08714817.1| hypothetical protein MCOL_04791 ... 136 1e-30
gi|240170826|ref|ZP_04749485.1| membrane protein MmpS5_1 [Mycoba... 135 2e-30
gi|296164372|ref|ZP_06846949.1| MmpS family membrane protein [My... 132 1e-29
>gi|15607592|ref|NP_214965.1| membrane protein [Mycobacterium tuberculosis H37Rv]
gi|15839839|ref|NP_334876.1| hypothetical protein MT0467 [Mycobacterium tuberculosis CDC1551]
gi|31791629|ref|NP_854122.1| membrane protein [Mycobacterium bovis AF2122/97]
82 more sequence titles
Length=140
Score = 288 bits (738), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/140 (99%), Positives = 140/140 (100%), Gaps = 0/140 (0%)
Query 1 VLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGP 60
+LMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGP
Sbjct 1 MLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGP 60
Query 61 PGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKV 120
PGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKV
Sbjct 61 PGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKV 120
Query 121 RAERVSNEVNAYTYCLVKSA 140
RAERVSNEVNAYTYCLVKSA
Sbjct 121 RAERVSNEVNAYTYCLVKSA 140
>gi|240169833|ref|ZP_04748492.1| membrane protein MmpS4_2 [Mycobacterium kansasii ATCC 12478]
Length=139
Score = 242 bits (618), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/140 (83%), Positives = 127/140 (91%), Gaps = 1/140 (0%)
Query 1 VLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGP 60
+L RTWI LVIL VVI GGFTVHRIRGFF SE R SYSD+NL+ SKPFNPK +TYE+FGP
Sbjct 1 MLSRTWIALVILAVVIAGGFTVHRIRGFFASEKRASYSDSNLD-SKPFNPKQITYEVFGP 59
Query 61 PGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKV 120
PGTVADISYFDVNS+PQRVD AVLPWSLH TTN AAVMGN+VAQG+SDSIGCRITVDG V
Sbjct 60 PGTVADISYFDVNSDPQRVDQAVLPWSLHFTTNLAAVMGNLVAQGDSDSIGCRITVDGVV 119
Query 121 RAERVSNEVNAYTYCLVKSA 140
+AE+VS+EVNAYTYCLVKSA
Sbjct 120 KAEKVSHEVNAYTYCLVKSA 139
>gi|183980796|ref|YP_001849087.1| membrane protein MmpS4_2 [Mycobacterium marinum M]
gi|183174122|gb|ACC39232.1| conserved membrane protein MmpS4_2 [Mycobacterium marinum M]
Length=139
Score = 226 bits (577), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 114/140 (82%), Positives = 130/140 (93%), Gaps = 1/140 (0%)
Query 1 VLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGP 60
+L RTWI LVI+ V+IVGGF+VHRIRGFF SE R SYSD+NL+N KPFNPK +TYE+FGP
Sbjct 1 MLSRTWIVLVIVAVIIVGGFSVHRIRGFFASEKRESYSDSNLDN-KPFNPKEITYEVFGP 59
Query 61 PGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKV 120
PGTVADISYFDVNS+PQ+V+GAVLPW+LH TTN AAVMGN+VAQGN++SIGCRITVDGKV
Sbjct 60 PGTVADISYFDVNSDPQQVEGAVLPWTLHFTTNLAAVMGNLVAQGNTNSIGCRITVDGKV 119
Query 121 RAERVSNEVNAYTYCLVKSA 140
+AERVSNEVNAYTYCLVKSA
Sbjct 120 KAERVSNEVNAYTYCLVKSA 139
>gi|333992658|ref|YP_004525272.1| hypothetical protein JDM601_4018 [Mycobacterium sp. JDM601]
gi|333488626|gb|AEF38018.1| membrane protein MmpS4_2 [Mycobacterium sp. JDM601]
Length=148
Score = 219 bits (557), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/140 (73%), Positives = 117/140 (84%), Gaps = 0/140 (0%)
Query 1 VLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGP 60
VL R WIPLVIL VV V GFTV RI G FGSE RPSY+D ++ +KPFNPK +TYEIFGP
Sbjct 9 VLSRVWIPLVILAVVGVAGFTVTRIHGLFGSEKRPSYADGQIDETKPFNPKRMTYEIFGP 68
Query 61 PGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKV 120
PGTVADISYFDVNSEPQRV LPW L I T AV+G+I+AQGNS+SIGCRITVDG+V
Sbjct 69 PGTVADISYFDVNSEPQRVQDVALPWQLEIVTTLPAVVGSIMAQGNSNSIGCRITVDGEV 128
Query 121 RAERVSNEVNAYTYCLVKSA 140
+AER+SNEVNAYT+CL+K+A
Sbjct 129 KAERISNEVNAYTFCLLKAA 148
>gi|15828277|ref|NP_302540.1| small membrane protein [Mycobacterium leprae TN]
gi|221230754|ref|YP_002504170.1| hypothetical protein MLBr_02377 [Mycobacterium leprae Br4923]
gi|1731226|sp|P54880.1|MMPS4_MYCLE RecName: Full=Putative membrane protein mmpS4
gi|699242|gb|AAA63005.1| u1740w [Mycobacterium leprae]
gi|13093970|emb|CAC31893.1| conserved small membrane protein [Mycobacterium leprae]
gi|219933861|emb|CAR72475.1| conserved small membrane protein [Mycobacterium leprae Br4923]
Length=154
Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 122/140 (88%), Gaps = 0/140 (0%)
Query 1 VLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGP 60
+L R WIPLVILVV++VGGF V+R+ +F SE R SY+D+NL +SKPFNPK + YE+FGP
Sbjct 15 LLSRIWIPLVILVVLVVGGFVVYRVHSYFASEKRESYADSNLGSSKPFNPKQIVYEVFGP 74
Query 61 PGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKV 120
PGTVADISYFD NS+PQR+DGA LPWSL +TT AAVMGN+VAQGN+DSIGCRI VDG V
Sbjct 75 PGTVADISYFDANSDPQRIDGAQLPWSLLMTTTLAAVMGNLVAQGNTDSIGCRIIVDGVV 134
Query 121 RAERVSNEVNAYTYCLVKSA 140
+AERVSNEVNAYTYCLVKSA
Sbjct 135 KAERVSNEVNAYTYCLVKSA 154
>gi|183980130|ref|YP_001848421.1| membrane protein MmpS5_3 [Mycobacterium marinum M]
gi|183173456|gb|ACC38566.1| conserved membrane protein MmpS5_3 [Mycobacterium marinum M]
Length=145
Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/140 (63%), Positives = 112/140 (80%), Gaps = 0/140 (0%)
Query 1 VLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGP 60
+L + WIPLVI+ VV V F+V R+ GFFGS+ Y+D + +++ PFNPK LTYEIFGP
Sbjct 6 ILGKLWIPLVIVTVVGVTAFSVSRVHGFFGSQKPELYTDGSSDDATPFNPKQLTYEIFGP 65
Query 61 PGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKV 120
GTVADI YFDVN++P+RVDGA LPWSL I + A++ GNIVAQG+S+ +GCRI VDG +
Sbjct 66 AGTVADIDYFDVNAQPRRVDGAHLPWSLEIKSTSASLTGNIVAQGDSNRLGCRIIVDGVI 125
Query 121 RAERVSNEVNAYTYCLVKSA 140
+AER+S EVNAYT+C+VKSA
Sbjct 126 KAERISQEVNAYTFCIVKSA 145
>gi|118473924|ref|YP_884793.1| MmpS4 protein [Mycobacterium smegmatis str. MC2 155]
gi|82393549|gb|ABB72060.1| MmpS4 [Mycobacterium smegmatis str. MC2 155]
gi|118175211|gb|ABK76107.1| MmpS4 protein [Mycobacterium smegmatis str. MC2 155]
Length=139
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 83/139 (60%), Positives = 108/139 (78%), Gaps = 0/139 (0%)
Query 2 LMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPP 61
+ R WIPL+++ VV VGGFTV R+ FG+E RPSY+DT +SKPF+PK LTYE+FGPP
Sbjct 1 MRRLWIPLLVIAVVAVGGFTVSRLHNVFGAEKRPSYADTKAADSKPFDPKRLTYEVFGPP 60
Query 62 GTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVR 121
GT+ADISYFD +S PQ V+ LPWSLH +G+I+AQG+SD+IGCRI VD +V+
Sbjct 61 GTLADISYFDEDSNPQFVEKVSLPWSLHFDIGKTTAVGSIMAQGDSDTIGCRIIVDDEVK 120
Query 122 AERVSNEVNAYTYCLVKSA 140
AE+VSN+ NA+T CL+K+A
Sbjct 121 AEKVSNQTNAFTSCLLKAA 139
>gi|5524339|gb|AAD44232.1|AF143772_38 TmtpA [Mycobacterium avium]
Length=221
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/138 (61%), Positives = 110/138 (80%), Gaps = 0/138 (0%)
Query 2 LMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPP 61
L R WIPLVI+ VV+ GG TV R+ G FGSE RPSY+DT +++KPFNPKH+ YE+FGP
Sbjct 83 LKRLWIPLVIVAVVVAGGLTVSRLHGIFGSEKRPSYADTRQQDTKPFNPKHVKYEVFGPA 142
Query 62 GTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVR 121
G +ADISYFD N EPQ ++G LPW+ I+T +++GN+VAQGNSDS+GCRI VDG V+
Sbjct 143 GAMADISYFDANGEPQHINGVELPWTFDISTTLPSIVGNVVAQGNSDSLGCRILVDGVVK 202
Query 122 AERVSNEVNAYTYCLVKS 139
ER+S+E+NA+TYC++ +
Sbjct 203 TERISHELNAFTYCVLTA 220
>gi|254819607|ref|ZP_05224608.1| MmpS4 protein [Mycobacterium intracellulare ATCC 13950]
Length=132
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 75/131 (58%), Positives = 106/131 (81%), Gaps = 0/131 (0%)
Query 9 LVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPGTVADIS 68
+VI+ VVI GG TV R+ G FGSE+RPSY+++ +++KPFNPKH+ YE+FGP GT+ADIS
Sbjct 1 MVIVAVVIAGGMTVSRLHGVFGSEHRPSYAESRQQDTKPFNPKHVKYEVFGPAGTMADIS 60
Query 69 YFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERVSNE 128
YFD N EP + G VLPW+ I+T +++GN+VAQGNSD++GCRI VDG V+ ER+S++
Sbjct 61 YFDANGEPNHITGIVLPWTFDISTTLPSIVGNVVAQGNSDTLGCRIVVDGVVKTERISHQ 120
Query 129 VNAYTYCLVKS 139
+NA+TYC++ +
Sbjct 121 LNAFTYCVLTA 131
>gi|41407339|ref|NP_960175.1| MmpS4 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118464605|ref|YP_882429.1| MmpS4 protein [Mycobacterium avium 104]
gi|254775696|ref|ZP_05217212.1| MmpS4 protein [Mycobacterium avium subsp. avium ATCC 25291]
gi|41395691|gb|AAS03558.1| MmpS4 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118165892|gb|ABK66789.1| MmpS4 protein [Mycobacterium avium 104]
gi|336457975|gb|EGO36963.1| Mycobacterium membrane protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=139
Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/138 (60%), Positives = 110/138 (80%), Gaps = 0/138 (0%)
Query 2 LMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPP 61
+ R WIPLVI+ VV+ GG TV R+ G FGSE RPSY+DT +++KPFNPKH+ YE+FGP
Sbjct 1 MKRLWIPLVIVAVVVAGGLTVSRLHGIFGSEKRPSYADTRQQDTKPFNPKHVKYEVFGPA 60
Query 62 GTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVR 121
G +ADISYFD N EPQ ++G LPW+ I+T +++GN+VAQGNSDS+GCRI VDG V+
Sbjct 61 GAMADISYFDANGEPQHINGVELPWTFDISTTLPSIVGNVVAQGNSDSLGCRILVDGVVK 120
Query 122 AERVSNEVNAYTYCLVKS 139
ER+S+E+NA+TYC++ +
Sbjct 121 TERISHELNAFTYCVLTA 138
>gi|118470714|ref|YP_887799.1| MmpS5 protein [Mycobacterium smegmatis str. MC2 155]
gi|118172001|gb|ABK72897.1| MmpS5 protein [Mycobacterium smegmatis str. MC2 155]
Length=158
Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 80/137 (59%), Positives = 104/137 (76%), Gaps = 0/137 (0%)
Query 4 RTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPGT 63
R WIPL+I VV VG FTV R+R FFGS + PS + ++++KPF+PK + YEI+G PG
Sbjct 22 RFWIPLLIGAVVFVGAFTVMRVRTFFGSGDDPSLASAKVDDTKPFDPKVVVYEIYGEPGA 81
Query 64 VADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAE 123
ADI+Y D++++PQRVDGA LPWSL ++T +V NIVAQGN D+I CRITVD +++ E
Sbjct 82 TADINYLDLDAQPQRVDGATLPWSLTLSTTAPSVFPNIVAQGNGDTITCRITVDDELKDE 141
Query 124 RVSNEVNAYTYCLVKSA 140
R SN VNA T+CLVKSA
Sbjct 142 RTSNGVNAQTFCLVKSA 158
>gi|118471113|ref|YP_884641.1| MmpS5 protein [Mycobacterium smegmatis str. MC2 155]
gi|118172400|gb|ABK73296.1| MmpS5 protein [Mycobacterium smegmatis str. MC2 155]
Length=142
Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 80/140 (58%), Positives = 107/140 (77%), Gaps = 0/140 (0%)
Query 1 VLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGP 60
+L R WIPL+I VVV+VG FTV R+R FFGS + PS + ++++KPF+PK + YEI+G
Sbjct 3 LLKRFWIPLLIGVVVLVGAFTVMRVRTFFGSGDDPSLASAKVDDTKPFDPKVVIYEIYGE 62
Query 61 PGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKV 120
PG AD++Y D++++PQRVDG LPW+L ++T +V NIVAQGN DSI CRITVD ++
Sbjct 63 PGATADVNYLDLDAQPQRVDGVSLPWTLTLSTTAPSVFPNIVAQGNGDSITCRITVDDEL 122
Query 121 RAERVSNEVNAYTYCLVKSA 140
+ ER SN VNA T+CLVKSA
Sbjct 123 KDERTSNGVNAQTFCLVKSA 142
>gi|146760117|emb|CAJ77679.1| mmps4 protein [Mycobacterium chelonae]
Length=138
Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 76/138 (56%), Positives = 104/138 (76%), Gaps = 0/138 (0%)
Query 3 MRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPG 62
MR WIPL++L V+ GGFTV R+ G FGSENRPSY+DTN+ ++K F+PK ++YE+FG PG
Sbjct 1 MRLWIPLLVLAVIGAGGFTVSRLHGVFGSENRPSYADTNVSDAKSFDPKKMSYEVFGSPG 60
Query 63 TVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRA 122
VADISYFDVN +P + LPWS+ +G+I+AQG+ SIGCRI VD +V++
Sbjct 61 NVADISYFDVNGDPLFIQKIPLPWSVKFEIGKTTAVGSIMAQGDGRSIGCRIIVDDEVKS 120
Query 123 ERVSNEVNAYTYCLVKSA 140
E+V+N+ NA+T CL+K+A
Sbjct 121 EKVTNQTNAFTSCLLKAA 138
>gi|342858823|ref|ZP_08715478.1| MmpS4 protein [Mycobacterium colombiense CECT 3035]
gi|342134527|gb|EGT87707.1| MmpS4 protein [Mycobacterium colombiense CECT 3035]
Length=159
Score = 173 bits (439), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 81/138 (59%), Positives = 110/138 (80%), Gaps = 0/138 (0%)
Query 2 LMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPP 61
L R WIPLVI+ VV+ GG TV R+ G FGSE RPSY+++ +++KPFNPKH+ YE+FGP
Sbjct 21 LGRLWIPLVIVAVVVAGGMTVSRLHGVFGSEKRPSYAESRQQDTKPFNPKHVKYEVFGPA 80
Query 62 GTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVR 121
G++ADISYFD N EP + G LPW+ I+T +++GN+VAQGNSDS+GCRI VDG V+
Sbjct 81 GSMADISYFDANGEPNHITGIELPWTFDISTTLPSIVGNVVAQGNSDSLGCRIVVDGVVK 140
Query 122 AERVSNEVNAYTYCLVKS 139
AER+S+E+NA+TYC++ +
Sbjct 141 AERISHELNAFTYCVLTA 158
>gi|169631195|ref|YP_001704844.1| MmpS family protein [Mycobacterium abscessus ATCC 19977]
gi|146760154|emb|CAJ77699.1| Mmps4 protein [Mycobacterium abscessus]
gi|169243162|emb|CAM64190.1| Putative membrane protein, MmpS family [Mycobacterium abscessus]
Length=138
Score = 173 bits (438), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 74/138 (54%), Positives = 104/138 (76%), Gaps = 0/138 (0%)
Query 3 MRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPG 62
MR WIPL+++ V+ VGGFTV R+ G FG+E RPSY+DTN+ ++K F+PK ++YE+FG PG
Sbjct 1 MRLWIPLLVIAVIAVGGFTVSRLHGVFGNEKRPSYADTNVSDAKSFDPKKMSYEVFGSPG 60
Query 63 TVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRA 122
VADISYFDVN +P + LPWS+ +G+I+AQG+ SIGCRI VD +V++
Sbjct 61 NVADISYFDVNGDPLFIQKVPLPWSVKFEIGKTTAVGSIMAQGDGSSIGCRIIVDDEVKS 120
Query 123 ERVSNEVNAYTYCLVKSA 140
E+V+N+ NA+T CL+K+A
Sbjct 121 EKVTNQTNAFTSCLLKAA 138
>gi|183980798|ref|YP_001849089.1| hypothetical protein MMAR_0774 [Mycobacterium marinum M]
gi|183174124|gb|ACC39234.1| conserved membrane protein [Mycobacterium marinum M]
Length=148
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/140 (58%), Positives = 108/140 (78%), Gaps = 2/140 (1%)
Query 2 LMRTWIPLVILVVVIVGGFTVHRIRGFFG-SENRPSYSDTNLENSKPFNPKHLTYEIFGP 60
L RTWI LVIL VV++ F+V+R+R +FG ++RP S + ++ KPFNPKH+ YE+FGP
Sbjct 10 LKRTWIALVILAVVVIAAFSVNRLRSYFGVHDDRPLTSGVS-DDIKPFNPKHVVYEVFGP 68
Query 61 PGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKV 120
PGTVA+I+Y D+ ++PQRV G LPW+L +TT +V N+VAQG++D IGCRI V+G+V
Sbjct 69 PGTVANINYLDIEAQPQRVSGVTLPWTLAVTTTLPSVSVNVVAQGDTDQIGCRIIVNGEV 128
Query 121 RAERVSNEVNAYTYCLVKSA 140
+ ER NEVNA T+CLVKSA
Sbjct 129 KDERSENEVNAQTFCLVKSA 148
>gi|169630231|ref|YP_001703880.1| MmpS family protein [Mycobacterium abscessus ATCC 19977]
gi|169242198|emb|CAM63226.1| Putative membrane protein, MmpS family [Mycobacterium abscessus]
Length=143
Score = 169 bits (429), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 76/139 (55%), Positives = 103/139 (75%), Gaps = 0/139 (0%)
Query 2 LMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPP 61
+ + W+PL+I VV +GGF V R+RG FGSE+ + +D N +++ P+NPK L YEIFG P
Sbjct 5 IRKIWMPLLIAAVVAIGGFAVFRVRGIFGSESFGASADNNAKDAVPYNPKTLVYEIFGEP 64
Query 62 GTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVR 121
G +AD++YF+ +++P RVD LPW+ I + ++ GNIVAQGN D IGCRITV+G+V+
Sbjct 65 GAMADVNYFNEDAQPTRVDNVQLPWAFKIVSTLPSLSGNIVAQGNGDQIGCRITVNGEVK 124
Query 122 AERVSNEVNAYTYCLVKSA 140
ERVS E NAY YCLVKSA
Sbjct 125 MERVSTEHNAYIYCLVKSA 143
>gi|169631778|ref|YP_001705427.1| membrane protein MmpS [Mycobacterium abscessus ATCC 19977]
gi|169243745|emb|CAM64773.1| Probable membrane protein, MmpS [Mycobacterium abscessus]
Length=136
Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 74/135 (55%), Positives = 99/135 (74%), Gaps = 0/135 (0%)
Query 6 WIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPGTVA 65
WIPLV++VV I GGFTV R+ G FG+E RP Y+ + E +P +PK+L YE+FGPPGTVA
Sbjct 2 WIPLVLVVVGIAGGFTVSRLHGVFGNERRPEYATADREEKRPHDPKYLVYEVFGPPGTVA 61
Query 66 DISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERV 125
ISYFD ++EPQ + A LPWS+ +A MGNI AQG++DSIGCRI V KV+ E++
Sbjct 62 TISYFDADAEPQVIRQAALPWSVEFPITEATAMGNITAQGDTDSIGCRILVGDKVKDEKI 121
Query 126 SNEVNAYTYCLVKSA 140
V+A T+C++K+A
Sbjct 122 RYGVSALTFCMLKAA 136
>gi|240169835|ref|ZP_04748494.1| hypothetical protein MkanA1_11007 [Mycobacterium kansasii ATCC
12478]
Length=148
Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/139 (58%), Positives = 106/139 (77%), Gaps = 0/139 (0%)
Query 2 LMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPP 61
L R WIPLVI+ VV V GF+V+R+RGFFG ++ + ++ KPFNPKH+ YE+FGPP
Sbjct 10 LKRVWIPLVIVAVVAVAGFSVYRLRGFFGYTDKGPITSGIADDIKPFNPKHVVYEVFGPP 69
Query 62 GTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVR 121
GT+A+I+Y D+N++PQRV LPW+L +TT +V N+VAQGNSD IGCRI V+G+V+
Sbjct 70 GTIANINYLDINAQPQRVSNVPLPWTLSVTTTLPSVSVNVVAQGNSDQIGCRIIVNGEVK 129
Query 122 AERVSNEVNAYTYCLVKSA 140
ER N+VNA T+CLVKSA
Sbjct 130 DERSENQVNAQTFCLVKSA 148
>gi|296164400|ref|ZP_06846975.1| MmpS family membrane protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900240|gb|EFG79671.1| MmpS family membrane protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=116
Score = 159 bits (403), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 92/115 (80%), Gaps = 0/115 (0%)
Query 25 IRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPGTVADISYFDVNSEPQRVDGAVL 84
+ G FGSE R SY+DT ++++KPFNPKH+ YEIFGPPGT ADISYFDV+ P V+G +
Sbjct 1 MHGIFGSEKRESYADTRIKDTKPFNPKHIRYEIFGPPGTTADISYFDVDGNPVHVNGQPV 60
Query 85 PWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERVSNEVNAYTYCLVKS 139
PWS I+T +++GN+VAQGN D +GCRI VDG V+AERVS+E+NA+TYC++ +
Sbjct 61 PWSFDISTTLPSILGNVVAQGNGDMLGCRIVVDGVVKAERVSHELNAFTYCMLTA 115
>gi|118617881|ref|YP_906213.1| membrane protein MmpS4 [Mycobacterium ulcerans Agy99]
gi|118569991|gb|ABL04742.1| conserved membrane protein MmpS4 [Mycobacterium ulcerans Agy99]
Length=156
Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/141 (49%), Positives = 97/141 (69%), Gaps = 1/141 (0%)
Query 1 VLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENS-KPFNPKHLTYEIFG 59
VL R W+PLV+ VV VGGF V R+RG FGS+ P+Y+D+ S PK + YEIFG
Sbjct 16 VLKRAWLPLVLAVVFAVGGFAVSRVRGMFGSQQLPTYADSTPAGSVSSSGPKRVRYEIFG 75
Query 60 PPGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGK 119
PGT+ADI+Y D E Q+++ LPWS+ + T+ +++ NI+AQ N+D +GCRI+ G+
Sbjct 76 APGTIADINYMDPAGEAQQLNDVALPWSIEVETDAPSMVANIIAQANTDFLGCRISSGGE 135
Query 120 VRAERVSNEVNAYTYCLVKSA 140
V+ ER S+ V+AY YC+ KSA
Sbjct 136 VKDERTSSAVSAYVYCIAKSA 156
>gi|118465434|ref|YP_883027.1| MmpS4 protein [Mycobacterium avium 104]
gi|118166721|gb|ABK67618.1| MmpS4 protein [Mycobacterium avium 104]
Length=148
Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/140 (55%), Positives = 102/140 (73%), Gaps = 0/140 (0%)
Query 1 VLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGP 60
++ R W+ LV++VVV V GF V+R+ G FGS N S + + ++PF+PKH+T E+FG
Sbjct 9 LVKRGWMVLVVVVVVGVAGFCVYRLHGIFGSHNNTSAAGGISDQTEPFSPKHITLEVFGN 68
Query 61 PGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKV 120
PG VA I+Y D+N +P++V A LPWSL + T N+VAQGNSDS+GCRITVDG V
Sbjct 69 PGAVATINYVDINVQPRQVLNAALPWSLTMVTTQPGAFSNLVAQGNSDSLGCRITVDGDV 128
Query 121 RAERVSNEVNAYTYCLVKSA 140
+ ER+ N+VNAYT+CLVKSA
Sbjct 129 KDERIVNQVNAYTFCLVKSA 148
>gi|169629386|ref|YP_001703035.1| putative membrane protein MmpS [Mycobacterium abscessus ATCC
19977]
gi|169241353|emb|CAM62381.1| Putative membrane protein, MmpS [Mycobacterium abscessus]
Length=133
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/133 (51%), Positives = 96/133 (73%), Gaps = 1/133 (0%)
Query 9 LVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPGTVADIS 68
+V+++V+++ GF V RIRG FGS P+Y+ + ++ PKH+ YEIFGPPGT+ADI+
Sbjct 1 MVMVLVLVIAGFAVWRIRGIFGSHQLPTYAGSMTDDKNNSKPKHVLYEIFGPPGTIADIN 60
Query 69 YFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQG-NSDSIGCRITVDGKVRAERVSN 127
Y D EP +++GAVLPWS+ I T ++ GNI+AQ N+D +GCRIT + + + ER +N
Sbjct 61 YIDKEGEPHQINGAVLPWSIEIITTAPSMTGNILAQTRNADGLGCRITANDEKKDERYTN 120
Query 128 EVNAYTYCLVKSA 140
EV+AY YC VKSA
Sbjct 121 EVSAYVYCFVKSA 133
>gi|254776285|ref|ZP_05217801.1| MmpS4 protein [Mycobacterium avium subsp. avium ATCC 25291]
Length=134
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/122 (56%), Positives = 89/122 (73%), Gaps = 0/122 (0%)
Query 19 GFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPGTVADISYFDVNSEPQR 78
GF V+R+ G FGS N S + + ++PF+PKH+T E+FG PG VA I+Y D+N +P++
Sbjct 13 GFCVYRLHGIFGSHNNTSAAGGISDQTEPFSPKHITLEVFGNPGAVATINYVDINVQPRQ 72
Query 79 VDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERVSNEVNAYTYCLVK 138
V A LPWSL + T N+VAQGNSDS+GCRITVDG V+ ER+ N+VNAYT+CLVK
Sbjct 73 VLNAALPWSLTMVTTQPGAFSNLVAQGNSDSLGCRITVDGDVKDERIVNQVNAYTFCLVK 132
Query 139 SA 140
SA
Sbjct 133 SA 134
>gi|240172076|ref|ZP_04750735.1| hypothetical protein MkanA1_22360 [Mycobacterium kansasii ATCC
12478]
Length=149
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/139 (49%), Positives = 95/139 (69%), Gaps = 0/139 (0%)
Query 2 LMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPP 61
L R WIPLV+ + V GFTV+R+ G FG+ + S+ + + PFNPK + YE+ GPP
Sbjct 11 LKRLWIPLVVSLTVATSGFTVYRLHGIFGAAGFSAISNGHADEIVPFNPKQVRYEVVGPP 70
Query 62 GTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVR 121
GT ISY D N+ PQ+ +LPW+ TT AV N+VAQG+S++IGCRI+V+G+++
Sbjct 71 GTTGSISYLDENAAPQQARFTMLPWTHTFTTTIPAVFANLVAQGDSNAIGCRISVNGEIK 130
Query 122 AERVSNEVNAYTYCLVKSA 140
++ + EVNA T+CLVKSA
Sbjct 131 EQQYATEVNAQTFCLVKSA 149
>gi|15607817|ref|NP_215191.1| hypothetical protein Rv0677c [Mycobacterium tuberculosis H37Rv]
gi|15840080|ref|NP_335117.1| MmpS family membrane protein [Mycobacterium tuberculosis CDC1551]
gi|31791861|ref|NP_854354.1| hypothetical protein Mb0696c [Mycobacterium bovis AF2122/97]
78 more sequence titles
Length=142
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/139 (52%), Positives = 96/139 (70%), Gaps = 1/139 (0%)
Query 2 LMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPP 61
L R WIPL+ILVVV + GFTV RIR FFGSE ++ +PF+PK + YE+ G
Sbjct 5 LKRAWIPLLILVVVAIAGFTVQRIRTFFGSEGILVTPKVFADDPEPFDPKVVEYEVSGS- 63
Query 62 GTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVR 121
G+ +I+Y D++++PQR+DGA LPWSL + T + NI+AQG+ SI CRITVDG+V+
Sbjct 64 GSYVNINYLDLDAKPQRIDGAALPWSLTLKTTAPSAAPNILAQGDGTSITCRITVDGEVK 123
Query 122 AERVSNEVNAYTYCLVKSA 140
ER + V+A TYC VKSA
Sbjct 124 DERTATGVDALTYCFVKSA 142
>gi|169628228|ref|YP_001701877.1| membrane protein MmpS [Mycobacterium abscessus ATCC 19977]
gi|169240195|emb|CAM61223.1| Probable membrane protein, MmpS [Mycobacterium abscessus]
Length=133
Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 66/133 (50%), Positives = 95/133 (72%), Gaps = 1/133 (0%)
Query 9 LVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPGTVADIS 68
+V+++V+++ GF V RIRG FGS P+Y+ + ++ PKH+ YEIFGPPGT+ADI+
Sbjct 1 MVMVLVLVIAGFAVWRIRGIFGSHQLPTYAGSMTDDKNNSKPKHVLYEIFGPPGTIADIN 60
Query 69 YFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQG-NSDSIGCRITVDGKVRAERVSN 127
Y D EP +++GA LPWS+ I T ++ GNI+AQ N+D +GCRIT + + + ER +N
Sbjct 61 YIDKEGEPHQINGATLPWSIEIITTAPSMTGNILAQTRNADGLGCRITANDEKKDERYTN 120
Query 128 EVNAYTYCLVKSA 140
EV+AY YC VKSA
Sbjct 121 EVSAYVYCFVKSA 133
>gi|183983169|ref|YP_001851460.1| membrane protein MmpS4 [Mycobacterium marinum M]
gi|183176495|gb|ACC41605.1| conserved membrane protein MmpS4 [Mycobacterium marinum M]
Length=132
Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 92/132 (70%), Gaps = 1/132 (0%)
Query 10 VILVVVIVGGFTVHRIRGFFGSENRPSYSD-TNLENSKPFNPKHLTYEIFGPPGTVADIS 68
++ VV VGGF V R+RG FGS+ P+Y+D T N PK + YEIFG PGT+ADI+
Sbjct 1 MLAVVFAVGGFAVSRVRGMFGSQQLPTYADSTPAGNVSSSGPKRVRYEIFGAPGTIADIN 60
Query 69 YFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERVSNE 128
Y D E Q+++ LPWS+ + T+ +++ NI+AQGNSD +GCRI+ DG+V+ ER S+
Sbjct 61 YMDPAGEAQQLNDVALPWSIEVETDAPSMVANIIAQGNSDFLGCRISSDGEVKDERTSSA 120
Query 129 VNAYTYCLVKSA 140
V+AY YC+ KSA
Sbjct 121 VSAYVYCIAKSA 132
>gi|254820444|ref|ZP_05225445.1| hypothetical protein MintA_10976 [Mycobacterium intracellulare
ATCC 13950]
Length=134
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/132 (50%), Positives = 94/132 (72%), Gaps = 0/132 (0%)
Query 9 LVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPGTVADIS 68
+V ++VV + GF ++R+ G FGS + + + PFNPK + E+FG PG VA I+
Sbjct 3 IVSVLVVALAGFGIYRLHGIFGSHDNTTANSGLAAEIVPFNPKQVVLEVFGAPGAVATIN 62
Query 69 YFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERVSNE 128
Y DVN++PQ+V A LPWS ITT + AV+GN+VAQGN D++GCRITV+G+V+ +R ++
Sbjct 63 YLDVNAQPQQVKDAPLPWSFTITTTEPAVIGNVVAQGNGDTLGCRITVNGEVKDQRTVHK 122
Query 129 VNAYTYCLVKSA 140
V+AYT+CL KS
Sbjct 123 VDAYTFCLDKSG 134
>gi|240171020|ref|ZP_04749679.1| hypothetical protein MkanA1_17040 [Mycobacterium kansasii ATCC
12478]
Length=134
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/122 (57%), Positives = 87/122 (72%), Gaps = 0/122 (0%)
Query 19 GFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPGTVADISYFDVNSEPQR 78
GF V+R+ G FGS++ S + PFNPK +T E+FG PGTVA I+Y DVN++PQ+
Sbjct 13 GFGVYRLHGIFGSQDDTSAAGGISNEIIPFNPKQVTLEVFGAPGTVATINYLDVNAQPQQ 72
Query 79 VDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERVSNEVNAYTYCLVK 138
V LPWS ITT AV N+VAQGNS+SIGCRITV+G V+ ER N+VNAYT+CL K
Sbjct 73 VLDTTLPWSYTITTTQPAVFANVVAQGNSNSIGCRITVNGVVKDERTVNKVNAYTFCLDK 132
Query 139 SA 140
S+
Sbjct 133 SS 134
>gi|118616542|ref|YP_904874.1| transmembrane proteinm, MmpS5 [Mycobacterium ulcerans Agy99]
gi|183981027|ref|YP_001849318.1| transmembrane proteinm, MmpS5 [Mycobacterium marinum M]
gi|118568652|gb|ABL03403.1| conserved transmembrane proteinm, MmpS5 [Mycobacterium ulcerans
Agy99]
gi|183174353|gb|ACC39463.1| conserved transmembrane proteinm, MmpS5 [Mycobacterium marinum
M]
Length=142
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 94/140 (68%), Gaps = 1/140 (0%)
Query 1 VLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGP 60
+L R WIPL+ILVVV + GFTV RIR FFG++ + +P++PK + YEI G
Sbjct 4 ILKRAWIPLLILVVVAIAGFTVQRIRTFFGADGILVTPKVFANDPEPYDPKVVKYEISGS 63
Query 61 PGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKV 120
G+ A+I+Y D++++PQR+DGA LPWSL + T + NI+AQGN SI CRI VD V
Sbjct 64 -GSYANINYLDLDAKPQRIDGASLPWSLTLQTTAPSAAPNILAQGNGSSISCRIIVDDVV 122
Query 121 RAERVSNEVNAYTYCLVKSA 140
+ ER + V+A TYC VKSA
Sbjct 123 KDERTATGVDALTYCFVKSA 142
>gi|254818587|ref|ZP_05223588.1| membrane protein MmpS1 [Mycobacterium intracellulare ATCC 13950]
Length=142
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/140 (45%), Positives = 95/140 (68%), Gaps = 0/140 (0%)
Query 1 VLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGP 60
++ R W+PLV+++V+ + F V R+ G FG ++ + ++ FNPKH+ Y+++GP
Sbjct 3 LVKRAWVPLVMVLVIAIASFAVVRLHGVFGRQSVSAGGANGVDTLVQFNPKHVLYDVWGP 62
Query 61 PGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKV 120
GTV + Y D +++PQRV A +PWS I T D AV+ +VAQG +DSIGCRITV+G+V
Sbjct 63 AGTVVQVDYLDEHAQPQRVATATVPWSYEIVTTDTAVIATVVAQGEADSIGCRITVNGEV 122
Query 121 RAERVSNEVNAYTYCLVKSA 140
R +RV + A T+C++KSA
Sbjct 123 RDQRVFDGHRAQTHCIMKSA 142
>gi|31792741|ref|NP_855234.1| membrane protein [Mycobacterium bovis AF2122/97]
gi|121637477|ref|YP_977700.1| putative membrane protein mmpS6 [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224989952|ref|YP_002644639.1| hypothetical protein JTY_1583 [Mycobacterium bovis BCG str. Tokyo
172]
17 more sequence titles
Length=148
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/140 (53%), Positives = 99/140 (71%), Gaps = 0/140 (0%)
Query 1 VLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGP 60
++ R W+ LV + VV V GF+V+R+ G FGS + S + + KPFNPK +T E+FG
Sbjct 9 LVKRGWMVLVAVAVVAVAGFSVYRLHGIFGSHDTTSTAGGVANDIKPFNPKQVTLEVFGA 68
Query 61 PGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKV 120
PGTVA I+Y DV++ P++V LPWS ITT AV N+VAQG+S+SIGCRITV+G V
Sbjct 69 PGTVATINYLDVDATPRQVLDTTLPWSYTITTTLPAVFANVVAQGDSNSIGCRITVNGVV 128
Query 121 RAERVSNEVNAYTYCLVKSA 140
+ ER+ NEV AYT+CL KS+
Sbjct 129 KDERIVNEVRAYTFCLDKSS 148
>gi|296165068|ref|ZP_06847621.1| MmpS family membrane protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899561|gb|EFG79014.1| MmpS family membrane protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=144
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 61/140 (44%), Positives = 103/140 (74%), Gaps = 1/140 (0%)
Query 1 VLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGP 60
V+ W+PL+I+ V++VGGF V R++ FFG+ + + L++SKPF PK + YE+FG
Sbjct 6 VVRNAWLPLLIVAVLVVGGFAVARVKSFFGAHDTGILTSPRLDDSKPFKPKVVKYEVFGS 65
Query 61 PGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKV 120
+ A+++Y D++++P+R+DGA LPW+L ++T +V N+ AQ + +S+GCRIT+D +V
Sbjct 66 ASS-ANVNYLDLSADPKRIDGAPLPWTLVLSTTAPSVFPNLSAQSDGNSLGCRITIDDEV 124
Query 121 RAERVSNEVNAYTYCLVKSA 140
+AE +++ V+A T+C+VKSA
Sbjct 125 KAENMTHGVHALTFCMVKSA 144
>gi|339631627|ref|YP_004723269.1| hypothetical protein MAF_15830 [Mycobacterium africanum GM041182]
gi|339330983|emb|CCC26655.1| unnamed protein product [Mycobacterium africanum GM041182]
Length=148
Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/140 (53%), Positives = 99/140 (71%), Gaps = 0/140 (0%)
Query 1 VLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGP 60
++ R W+ LV + VV V GF+V+R+ G FGS + S + + KPFNPK +T E+FG
Sbjct 9 LVKRGWMVLVAVAVVAVAGFSVYRLHGIFGSHDTTSTAGGVANDIKPFNPKQVTLEVFGA 68
Query 61 PGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKV 120
PGTVA ++Y DV++ P++V LPWS ITT AV N+VAQG+S+SIGCRITV+G V
Sbjct 69 PGTVATVNYLDVDATPRQVLDTTLPWSYTITTTLPAVFANVVAQGDSNSIGCRITVNGVV 128
Query 121 RAERVSNEVNAYTYCLVKSA 140
+ ER+ NEV AYT+CL KS+
Sbjct 129 KDERIVNEVRAYTFCLDKSS 148
>gi|183981710|ref|YP_001850001.1| hypothetical protein MMAR_1696 [Mycobacterium marinum M]
gi|183175036|gb|ACC40146.1| conserved membrane protein [Mycobacterium marinum M]
Length=143
Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/140 (50%), Positives = 98/140 (70%), Gaps = 0/140 (0%)
Query 1 VLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGP 60
++ R W+ +V + VV++ GF ++R+ G FGS N S ++ PFNPK + ++FG
Sbjct 4 LVRRGWMMIVAVAVVVIAGFAIYRLHGIFGSHNNASGANGISNEIVPFNPKQVVLDVFGA 63
Query 61 PGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKV 120
PG VA I+Y DVN++PQ+V A LPWS ITT + AV+GN+VAQGN +IGCRITV+G+V
Sbjct 64 PGAVATINYLDVNAQPQQVVDAPLPWSFTITTTEPAVLGNVVAQGNGGTIGCRITVNGEV 123
Query 121 RAERVSNEVNAYTYCLVKSA 140
+ ER+ N +AYT+CL KS
Sbjct 124 KDERIVNTPDAYTFCLDKSG 143
>gi|118462696|ref|YP_881703.1| MmpS5 protein [Mycobacterium avium 104]
gi|118163983|gb|ABK64880.1| MmpS5 protein [Mycobacterium avium 104]
Length=144
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/135 (46%), Positives = 100/135 (75%), Gaps = 1/135 (0%)
Query 6 WIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPGTVA 65
W+PL+I+ VV+VGGF V R++ FFG+ + + L++SKPF PK + YE+FG + A
Sbjct 11 WLPLLIVAVVLVGGFAVVRVKSFFGAHDTGILTSPRLDDSKPFKPKVVKYEVFGS-ASQA 69
Query 66 DISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERV 125
+++Y D++++P+RVDGA LPW+L ++T +V N+ AQ + +++GCRIT+D +V+ E +
Sbjct 70 NVNYLDLSADPKRVDGAPLPWTLVLSTTAPSVFPNLSAQSDGNTLGCRITIDDEVKDENI 129
Query 126 SNEVNAYTYCLVKSA 140
++ V+A T+CLVKSA
Sbjct 130 THGVHALTFCLVKSA 144
>gi|41407835|ref|NP_960671.1| MmpS5 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|254775167|ref|ZP_05216683.1| MmpS5 protein [Mycobacterium avium subsp. avium ATCC 25291]
gi|41396189|gb|AAS04054.1| MmpS5 [Mycobacterium avium subsp. paratuberculosis K-10]
Length=138
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/139 (44%), Positives = 101/139 (73%), Gaps = 1/139 (0%)
Query 2 LMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPP 61
+ W+PL+I+ VV+VGGF V R++ FFG+ + + L++SKPF PK + YE+FG
Sbjct 1 MRNAWLPLLIVAVVLVGGFAVVRVKSFFGAHDTGILTSPRLDDSKPFKPKVVKYEVFGS- 59
Query 62 GTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVR 121
+ A+++Y D++++P+RVDGA LPW+L ++T +V N+ AQ + +++GCRIT+D +V+
Sbjct 60 ASQANVNYLDLSADPKRVDGAPLPWTLVLSTTAPSVFPNLSAQSDGNTLGCRITIDDEVK 119
Query 122 AERVSNEVNAYTYCLVKSA 140
E +++ V+A T+CLVKSA
Sbjct 120 DENITHGVHALTFCLVKSA 138
>gi|120404792|ref|YP_954621.1| hypothetical protein Mvan_3834 [Mycobacterium vanbaalenii PYR-1]
gi|119957610|gb|ABM14615.1| hypothetical protein Mvan_3834 [Mycobacterium vanbaalenii PYR-1]
Length=139
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/139 (52%), Positives = 98/139 (71%), Gaps = 0/139 (0%)
Query 2 LMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPP 61
+ R WIPLV+++V++VGG V RIR FGS P+Y+ + E+S +PK + YEIFG P
Sbjct 1 MTRAWIPLVLVLVLVVGGLAVWRIRNIFGSHQLPTYAGSMSEDSNKSDPKIVRYEIFGDP 60
Query 62 GTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVR 121
G ADI+Y D +P ++ GA LPWS+ + TN A++GN+VAQG+SD IGCRI+ DG V+
Sbjct 61 GATADINYIDDEGDPNQIVGATLPWSIEVETNSPAMVGNVVAQGDSDFIGCRISADGVVK 120
Query 122 AERVSNEVNAYTYCLVKSA 140
ER ++ V+AY YC KSA
Sbjct 121 DERTAHNVSAYVYCFTKSA 139
>gi|254820611|ref|ZP_05225612.1| MmpS5 protein [Mycobacterium intracellulare ATCC 13950]
Length=138
Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/139 (44%), Positives = 99/139 (72%), Gaps = 1/139 (0%)
Query 2 LMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPP 61
+ W+PL+I+ VV+VGGF V R++ FFG+ + + L+ SKPF PK + YE+FG
Sbjct 1 MRNAWLPLLIVAVVLVGGFAVVRVKSFFGAHDTGVMTSPRLDESKPFKPKVVKYEVFGSA 60
Query 62 GTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVR 121
A+++Y D++++P+R+DGA LPW+L ++T +V N+ AQ + +S+GCRIT+D +V+
Sbjct 61 AQ-ANVNYLDLSADPKRIDGAPLPWTLVLSTTAPSVFPNLSAQSDGNSLGCRITIDDEVK 119
Query 122 AERVSNEVNAYTYCLVKSA 140
E +++ V+A T+C+VKSA
Sbjct 120 DENLTHGVHALTFCMVKSA 138
>gi|183981736|ref|YP_001850027.1| membrane protein MmpS1 [Mycobacterium marinum M]
gi|183175062|gb|ACC40172.1| conserved membrane protein MmpS1 [Mycobacterium marinum M]
Length=142
Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/137 (49%), Positives = 92/137 (68%), Gaps = 1/137 (0%)
Query 4 RTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPGT 63
R W+P+V+++V IVG V R+ G FGS +R N + FNPK++ YE+FGPPGT
Sbjct 7 RMWVPIVMILVAIVGASVVMRLHGVFGS-HRYVPDAGNSDAIVAFNPKYVRYEVFGPPGT 65
Query 64 VADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAE 123
V ++Y D +EP V A +PWSL I T +V+ ++VAQGNS ++ CRITV+G VRAE
Sbjct 66 VVTVNYLDAQAEPHEVANAAIPWSLTIVTTLTSVVAHLVAQGNSATLSCRITVNGVVRAE 125
Query 124 RVSNEVNAYTYCLVKSA 140
R ++ +A T CLVKSA
Sbjct 126 RTADAHDAATSCLVKSA 142
>gi|118617529|ref|YP_905861.1| hypothetical protein MUL_1935 [Mycobacterium ulcerans Agy99]
gi|118569639|gb|ABL04390.1| conserved membrane protein [Mycobacterium ulcerans Agy99]
Length=134
Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/122 (53%), Positives = 86/122 (71%), Gaps = 0/122 (0%)
Query 19 GFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPGTVADISYFDVNSEPQR 78
GF ++R+ G FGS N S ++ PFNPK + ++FG PG VA I+Y DVN++PQ+
Sbjct 13 GFAIYRLHGIFGSHNNASGANGISNEIVPFNPKQVVLDVFGAPGAVATINYLDVNAQPQQ 72
Query 79 VDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERVSNEVNAYTYCLVK 138
V A LPWS ITT + AV+GN+VAQGN +IGCRITV+G+V+ ER+ N +AYT+CL K
Sbjct 73 VVDAPLPWSFTITTTEPAVLGNMVAQGNGGTIGCRITVNGEVKDERIVNTPDAYTFCLDK 132
Query 139 SA 140
S
Sbjct 133 SG 134
>gi|108802138|ref|YP_642335.1| hypothetical protein Mmcs_5175 [Mycobacterium sp. MCS]
gi|119871291|ref|YP_941243.1| hypothetical protein Mkms_5264 [Mycobacterium sp. KMS]
gi|126438119|ref|YP_001073810.1| membrane family protein [Mycobacterium sp. JLS]
gi|108772557|gb|ABG11279.1| Mycobacterium membrane [Mycobacterium sp. MCS]
gi|119697380|gb|ABL94453.1| Mycobacterium membrane family protein [Mycobacterium sp. KMS]
gi|126237919|gb|ABO01320.1| membrane family protein [Mycobacterium sp. JLS]
Length=142
Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/140 (50%), Positives = 97/140 (70%), Gaps = 1/140 (0%)
Query 1 VLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGP 60
V + WIP+V++VVV++ GFTVHRIRGFFG++ ++ +PF+PK + YEI G
Sbjct 4 VAKKAWIPIVVVVVVLIAGFTVHRIRGFFGADGITVTPRVFADDPEPFDPKVVRYEITGS 63
Query 61 PGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKV 120
G+ A+I+Y D++S+PQR+D LPW + + T +A+ NI AQG+ DSI CRI VD +V
Sbjct 64 -GSYANINYLDLDSKPQRLDNTALPWEITLETTEASAAPNIFAQGDGDSITCRIIVDDEV 122
Query 121 RAERVSNEVNAYTYCLVKSA 140
+ ER + VNA TYC VKSA
Sbjct 123 KDERTATGVNALTYCFVKSA 142
>gi|120404167|ref|YP_953996.1| hypothetical protein Mvan_3188 [Mycobacterium vanbaalenii PYR-1]
gi|119956985|gb|ABM13990.1| hypothetical protein Mvan_3188 [Mycobacterium vanbaalenii PYR-1]
Length=142
Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/140 (47%), Positives = 95/140 (68%), Gaps = 1/140 (0%)
Query 1 VLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGP 60
+ + W+PL+I+VVV + G TV RIR FFG+E + +PF+PK + YEI G
Sbjct 4 IAKKVWLPLLIVVVVAIAGLTVARIRTFFGAEGIIETPRNFADLPEPFDPKVVRYEITGS 63
Query 61 PGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKV 120
G+ AD++Y D++++PQRVDGA LPWSL + T + + NIVAQG+ +I CRI VD ++
Sbjct 64 -GSYADVNYLDLDAKPQRVDGAALPWSLTLETTEPSAAPNIVAQGDGSTITCRIFVDDEL 122
Query 121 RAERVSNEVNAYTYCLVKSA 140
+ ER ++ +NA T+C VKSA
Sbjct 123 KDERTTDGLNAQTFCFVKSA 142
>gi|240172456|ref|ZP_04751115.1| membrane transporter [Mycobacterium kansasii ATCC 12478]
Length=143
Score = 137 bits (344), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/139 (46%), Positives = 93/139 (67%), Gaps = 0/139 (0%)
Query 2 LMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPP 61
L R WIPLV+++ ++ GG V R+RG FGS+ +++ N + N K +TYE+FGP
Sbjct 5 LKRGWIPLVVVIALVAGGIAVDRLRGVFGSDPIFTWTGANSGVIESINTKRVTYEVFGPA 64
Query 62 GTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVR 121
GT +SY + ++P++ LPW+ +TT AV+ N+VAQGNSDSIGCRITV+G V+
Sbjct 65 GTAGSVSYLNKETQPEQASFTSLPWTYTMTTTIPAVIANVVAQGNSDSIGCRITVNGAVK 124
Query 122 AERVSNEVNAYTYCLVKSA 140
E+ S+ +A +CLVK+A
Sbjct 125 DEQSSSGHHAQAFCLVKAA 143
>gi|333991846|ref|YP_004524460.1| hypothetical protein JDM601_3206 [Mycobacterium sp. JDM601]
gi|333487814|gb|AEF37206.1| membrane protein MmpS4_2 [Mycobacterium sp. JDM601]
Length=119
Score = 136 bits (343), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 65/120 (55%), Positives = 91/120 (76%), Gaps = 2/120 (1%)
Query 22 VHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPGTVADISYFDVNSEPQRVDG 81
+HRIRG+FG ++ S S E++KPF+PK + Y+IF P GT ADI+Y D+ + PQRVDG
Sbjct 1 MHRIRGYFGGDDSGS-SAAPFEDTKPFHPKVVVYDIFSPDGTYADINYLDLEATPQRVDG 59
Query 82 AVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERVSNE-VNAYTYCLVKSA 140
A LPWSL ++T + AV NIVAQG+ +IGCR+T+DG+++ ERVS+ V+A T+C+VKS
Sbjct 60 ASLPWSLTLSTTNPAVSPNIVAQGDGSTIGCRVTIDGELKDERVSSSPVSAQTFCIVKSG 119
>gi|296171261|ref|ZP_06852665.1| MmpS family membrane protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894229|gb|EFG73986.1| MmpS family membrane protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=134
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/122 (51%), Positives = 85/122 (70%), Gaps = 0/122 (0%)
Query 19 GFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPGTVADISYFDVNSEPQR 78
GF ++R+ G FGS++ S + PFNPKH+ E+FG PG A I+Y DVN++PQ+
Sbjct 13 GFAIYRLNGIFGSQSGTSANSGLANEIVPFNPKHVVLEVFGRPGATATINYLDVNAQPQQ 72
Query 79 VDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERVSNEVNAYTYCLVK 138
V A LPWS ITT + AV+GN+VAQGN DS+GCRITV G+V+ +R ++ +AYT+C K
Sbjct 73 VKDAPLPWSFTITTTEPAVIGNVVAQGNGDSLGCRITVKGEVKDQRTVDKADAYTFCPDK 132
Query 139 SA 140
S
Sbjct 133 SG 134
>gi|342858162|ref|ZP_08714817.1| hypothetical protein MCOL_04791 [Mycobacterium colombiense CECT
3035]
gi|342133866|gb|EGT87046.1| hypothetical protein MCOL_04791 [Mycobacterium colombiense CECT
3035]
Length=148
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/141 (49%), Positives = 99/141 (71%), Gaps = 2/141 (1%)
Query 1 VLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENS-KPFNPKHLTYEIFG 59
+L R W+ +V ++VV + GF ++R+ G S S +++ L N PFNPK + E+FG
Sbjct 9 LLKRGWMVVVAVLVVALAGFGIYRLHGILWSHTSTS-ANSGLSNEIVPFNPKQVVLEVFG 67
Query 60 PPGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGK 119
PG A I+Y DVN++PQ+V A LPWS ITT + AV+GN+VAQG+ D++GCRITV+G+
Sbjct 68 APGATATINYLDVNAQPQQVKDASLPWSFTITTTEPAVIGNVVAQGDGDTLGCRITVNGE 127
Query 120 VRAERVSNEVNAYTYCLVKSA 140
V+ +R N+V+AYT+CL KS
Sbjct 128 VKDQRTVNKVDAYTFCLDKSG 148
>gi|240170826|ref|ZP_04749485.1| membrane protein MmpS5_1 [Mycobacterium kansasii ATCC 12478]
Length=139
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/135 (49%), Positives = 95/135 (71%), Gaps = 1/135 (0%)
Query 6 WIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPGTVA 65
WIPLV+++V+ V G V R+ FGS++ + + +E + FNPK +TYE+FGPPG+ A
Sbjct 6 WIPLVLVIVLAVSGLVVMRLHRIFGSQDLNANAGGGIEIVQ-FNPKVVTYEVFGPPGSTA 64
Query 66 DISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERV 125
+I+Y+D ++ +V+ A LPWS+ I+T +V NI+AQG+ IGCRITVDG VR E+
Sbjct 65 NINYWDADANTHQVNAAPLPWSVTISTTLPSVSANIMAQGDGSRIGCRITVDGVVRQEKK 124
Query 126 SNEVNAYTYCLVKSA 140
S+ VN T+CLVKSA
Sbjct 125 SDGVNPQTFCLVKSA 139
>gi|296164372|ref|ZP_06846949.1| MmpS family membrane protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900275|gb|EFG79704.1| MmpS family membrane protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=139
Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/139 (49%), Positives = 96/139 (70%), Gaps = 0/139 (0%)
Query 2 LMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPP 61
+ + WI LVI+ VV V GF V R+R FFG + + + + KPFNPK + Y+++GPP
Sbjct 1 MKKMWIVLVIVAVVAVAGFCVLRLRTFFGVHDDQTMTSGIADEIKPFNPKRVVYQVYGPP 60
Query 62 GTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVR 121
GTVA+I+Y D+N++PQ+ LPW+L +T+ +V NIVAQG+S+ IGCRI VD V+
Sbjct 61 GTVANINYLDINAQPQKASNVPLPWTLSVTSTLPSVSVNIVAQGDSNQIGCRIIVDEVVK 120
Query 122 AERVSNEVNAYTYCLVKSA 140
ER S +NA T+C+VKSA
Sbjct 121 DERSSQGMNAQTFCIVKSA 139
Lambda K H
0.320 0.137 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 130895291376
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40