BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0452
Length=236
Score E
Sequences producing significant alignments: (Bits) Value
gi|15839840|ref|NP_334877.1| hypothetical protein MT0468 [Mycoba... 468 4e-130
gi|15607593|ref|NP_214966.1| transcriptional regulatory protein ... 467 7e-130
gi|340625477|ref|YP_004743929.1| putative transcriptional regula... 464 3e-129
gi|289756526|ref|ZP_06515904.1| transcriptional regulator [Mycob... 463 7e-129
gi|298523929|ref|ZP_07011338.1| conserved hypothetical protein [... 454 3e-126
gi|339293503|gb|AEJ45614.1| hypothetical protein CCDC5079_0424 [... 451 3e-125
gi|41410043|ref|NP_962879.1| hypothetical protein MAP3945 [Mycob... 356 1e-96
gi|183980797|ref|YP_001849088.1| putative regulatory protein [My... 347 1e-93
gi|296168052|ref|ZP_06850118.1| transcriptional regulator [Mycob... 343 1e-92
gi|240169834|ref|ZP_04748493.1| putative regulatory protein [Myc... 341 4e-92
gi|254819778|ref|ZP_05224779.1| hypothetical protein MintA_07634... 339 2e-91
gi|118464786|ref|YP_883825.1| TetR family transcriptional regula... 315 3e-84
gi|254777135|ref|ZP_05218651.1| hypothetical protein MaviaA2_210... 313 1e-83
gi|169629385|ref|YP_001703034.1| transcriptional regulator [Myco... 306 2e-81
gi|342859046|ref|ZP_08715700.1| hypothetical protein MCOL_09218 ... 305 4e-81
gi|333992659|ref|YP_004525273.1| regulatory protein [Mycobacteri... 276 2e-72
gi|169628229|ref|YP_001701878.1| transcriptional regulator TetR ... 224 1e-56
gi|294633668|ref|ZP_06712226.1| TetR-family transcriptional regu... 141 7e-32
gi|111224743|ref|YP_715537.1| TetR family transcriptional regula... 141 9e-32
gi|329935833|ref|ZP_08285636.1| TetR family transcriptional regu... 137 1e-30
gi|345013503|ref|YP_004815857.1| regulatory protein TetR [Strept... 135 5e-30
gi|289766758|ref|ZP_06526136.1| TetR family transcriptional regu... 134 9e-30
gi|21226064|ref|NP_631843.1| TetR family transcriptional regulat... 134 1e-29
gi|213424057|pdb|2ZCX|A Chain A, Crystal Structure Of Tetr Famil... 134 1e-29
gi|152966285|ref|YP_001362069.1| TetR family transcriptional reg... 126 3e-27
gi|256391752|ref|YP_003113316.1| TetR family transcriptional reg... 125 5e-27
gi|302519666|ref|ZP_07272008.1| regulatory protein [Streptomyces... 116 2e-24
gi|300785538|ref|YP_003765829.1| TetR family transcriptional reg... 115 4e-24
gi|340526988|gb|AEK42193.1| TetR family transcriptional regulato... 114 9e-24
gi|254472983|ref|ZP_05086381.1| transcriptional regulator, TetR ... 103 2e-20
gi|302867003|ref|YP_003835640.1| regulatory protein TetR [Microm... 100 2e-19
gi|295838399|ref|ZP_06825332.1| TetR-family transcriptional regu... 100 2e-19
gi|333026482|ref|ZP_08454546.1| putative TetR family transcripti... 98.6 8e-19
gi|302519699|ref|ZP_07272041.1| transcriptional regulator [Strep... 97.4 2e-18
gi|87121560|ref|ZP_01077448.1| probable TetR-family transcriptio... 97.4 2e-18
gi|699240|gb|AAA63003.1| u1740y [Mycobacterium leprae] 97.4 2e-18
gi|326330989|ref|ZP_08197288.1| putative transcriptional regulat... 94.7 1e-17
gi|284033684|ref|YP_003383615.1| regulatory protein TetR [Kribbe... 94.7 1e-17
gi|295838375|ref|ZP_06825308.1| transcriptional regulator [Strep... 94.4 1e-17
gi|256377424|ref|YP_003101084.1| TetR family transcriptional reg... 91.7 8e-17
gi|329940850|ref|ZP_08290130.1| transcriptional regulator [Strep... 90.9 1e-16
gi|182677035|ref|YP_001831181.1| TetR family transcriptional reg... 89.7 3e-16
gi|226944966|ref|YP_002800039.1| TetR family transcriptional reg... 89.4 4e-16
gi|345014088|ref|YP_004816442.1| regulatory protein TetR [Strept... 88.2 8e-16
gi|344999239|ref|YP_004802093.1| TetR family transcriptional reg... 87.8 1e-15
gi|296131393|ref|YP_003638643.1| TetR family transcriptional reg... 85.5 5e-15
gi|229488992|ref|ZP_04382858.1| transcriptional regulator [Rhodo... 84.7 9e-15
gi|296138584|ref|YP_003645827.1| regulatory protein TetR [Tsukam... 84.3 1e-14
gi|152966740|ref|YP_001362524.1| TetR family transcriptional reg... 84.3 1e-14
gi|331695420|ref|YP_004331659.1| regulatory protein TetR [Pseudo... 84.0 2e-14
>gi|15839840|ref|NP_334877.1| hypothetical protein MT0468 [Mycobacterium tuberculosis CDC1551]
gi|148821649|ref|YP_001286403.1| transcriptional regulator [Mycobacterium tuberculosis F11]
gi|253797377|ref|YP_003030378.1| transcriptional regulator [Mycobacterium tuberculosis KZN 1435]
26 more sequence titles
Length=253
Score = 468 bits (1204), Expect = 4e-130, Method: Compositional matrix adjust.
Identities = 236/236 (100%), Positives = 236/236 (100%), Gaps = 0/236 (0%)
Query 1 VRYPLAVAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAV 60
VRYPLAVAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAV
Sbjct 18 VRYPLAVAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAV 77
Query 61 RRYFTSHKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLA 120
RRYFTSHKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLA
Sbjct 78 RRYFTSHKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLA 137
Query 121 NLHLHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLW 180
NLHLHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLW
Sbjct 138 NLHLHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLW 197
Query 181 QIANPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGSPCECRSPTR 236
QIANPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGSPCECRSPTR
Sbjct 198 QIANPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGSPCECRSPTR 253
>gi|15607593|ref|NP_214966.1| transcriptional regulatory protein [Mycobacterium tuberculosis
H37Rv]
gi|31791630|ref|NP_854123.1| transcriptional regulatory protein [Mycobacterium bovis AF2122/97]
gi|121636366|ref|YP_976589.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Pasteur 1173P2]
32 more sequence titles
Length=236
Score = 467 bits (1201), Expect = 7e-130, Method: Compositional matrix adjust.
Identities = 235/236 (99%), Positives = 236/236 (100%), Gaps = 0/236 (0%)
Query 1 VRYPLAVAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAV 60
+RYPLAVAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAV
Sbjct 1 MRYPLAVAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAV 60
Query 61 RRYFTSHKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLA 120
RRYFTSHKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLA
Sbjct 61 RRYFTSHKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLA 120
Query 121 NLHLHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLW 180
NLHLHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLW
Sbjct 121 NLHLHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLW 180
Query 181 QIANPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGSPCECRSPTR 236
QIANPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGSPCECRSPTR
Sbjct 181 QIANPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGSPCECRSPTR 236
>gi|340625477|ref|YP_004743929.1| putative transcriptional regulatory protein [Mycobacterium canettii
CIPT 140010059]
gi|340003667|emb|CCC42790.1| putative transcriptional regulatory protein [Mycobacterium canettii
CIPT 140010059]
Length=236
Score = 464 bits (1195), Expect = 3e-129, Method: Compositional matrix adjust.
Identities = 234/236 (99%), Positives = 235/236 (99%), Gaps = 0/236 (0%)
Query 1 VRYPLAVAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAV 60
+RYPLAVAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAV
Sbjct 1 MRYPLAVAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAV 60
Query 61 RRYFTSHKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLA 120
RRYFTSHKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLA
Sbjct 61 RRYFTSHKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLA 120
Query 121 NLHLHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLW 180
NLHLHLEQEVDVDRVIEVKRTSIAAV ALVDAIESALPALGRSGAFDILLAAYSLAATLW
Sbjct 121 NLHLHLEQEVDVDRVIEVKRTSIAAVTALVDAIESALPALGRSGAFDILLAAYSLAATLW 180
Query 181 QIANPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGSPCECRSPTR 236
QIANPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGSPCECRSPTR
Sbjct 181 QIANPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGSPCECRSPTR 236
>gi|289756526|ref|ZP_06515904.1| transcriptional regulator [Mycobacterium tuberculosis T85]
gi|294995957|ref|ZP_06801648.1| transcriptional regulator [Mycobacterium tuberculosis 210]
gi|289712090|gb|EFD76102.1| transcriptional regulator [Mycobacterium tuberculosis T85]
gi|326902278|gb|EGE49211.1| transcriptional regulator [Mycobacterium tuberculosis W-148]
Length=236
Score = 463 bits (1192), Expect = 7e-129, Method: Compositional matrix adjust.
Identities = 234/236 (99%), Positives = 235/236 (99%), Gaps = 0/236 (0%)
Query 1 VRYPLAVAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAV 60
+RYPLAVAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAV
Sbjct 1 MRYPLAVAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAV 60
Query 61 RRYFTSHKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLA 120
RRYFTSHKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLA
Sbjct 61 RRYFTSHKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLA 120
Query 121 NLHLHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLW 180
NLHL LEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLW
Sbjct 121 NLHLDLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLW 180
Query 181 QIANPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGSPCECRSPTR 236
QIANPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGSPCECRSPTR
Sbjct 181 QIANPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGSPCECRSPTR 236
>gi|298523929|ref|ZP_07011338.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|308369394|ref|ZP_07417634.2| transcriptional regulator [Mycobacterium tuberculosis SUMu002]
gi|308370407|ref|ZP_07421408.2| transcriptional regulator [Mycobacterium tuberculosis SUMu003]
8 more sequence titles
Length=230
Score = 454 bits (1169), Expect = 3e-126, Method: Compositional matrix adjust.
Identities = 229/230 (99%), Positives = 230/230 (100%), Gaps = 0/230 (0%)
Query 7 VAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTS 66
+AQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTS
Sbjct 1 MAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTS 60
Query 67 HKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLHL 126
HKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLHL
Sbjct 61 HKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLHL 120
Query 127 EQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPP 186
EQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPP
Sbjct 121 EQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPP 180
Query 187 ERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGSPCECRSPTR 236
ERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGSPCECRSPTR
Sbjct 181 ERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGSPCECRSPTR 230
>gi|339293503|gb|AEJ45614.1| hypothetical protein CCDC5079_0424 [Mycobacterium tuberculosis
CCDC5079]
gi|339297145|gb|AEJ49255.1| hypothetical protein CCDC5180_0418 [Mycobacterium tuberculosis
CCDC5180]
Length=230
Score = 451 bits (1161), Expect = 3e-125, Method: Compositional matrix adjust.
Identities = 228/230 (99%), Positives = 229/230 (99%), Gaps = 0/230 (0%)
Query 7 VAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTS 66
+AQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTS
Sbjct 1 MAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTS 60
Query 67 HKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLHL 126
HKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHL L
Sbjct 61 HKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLDL 120
Query 127 EQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPP 186
EQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPP
Sbjct 121 EQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPP 180
Query 187 ERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGSPCECRSPTR 236
ERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGSPCECRSPTR
Sbjct 181 ERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGSPCECRSPTR 230
>gi|41410043|ref|NP_962879.1| hypothetical protein MAP3945 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398876|gb|AAS06495.1| hypothetical protein MAP_3945 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=228
Score = 356 bits (914), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 176/227 (78%), Positives = 197/227 (87%), Gaps = 0/227 (0%)
Query 1 VRYPLAVAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAV 60
+RY VAQL FQRARTEE KRQRA ALVEAARSLALETGVASVTLTAVA RAGIHYSAV
Sbjct 1 MRYARPVAQLTFQRARTEEKKRQRAEALVEAARSLALETGVASVTLTAVARRAGIHYSAV 60
Query 61 RRYFTSHKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLA 120
RRYFTSHKEVLLHL+AEGW RWS TV ++L +PG + R+AE LA+ LA DPLFCDLLA
Sbjct 61 RRYFTSHKEVLLHLSAEGWVRWSNTVSDKLAQPGAATPSRIAETLADALADDPLFCDLLA 120
Query 121 NLHLHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLW 180
NLHLHLE EVD +RV+EVKR S AA ++L D+I+ ALP LGRSG+ DILLAAYSLAATLW
Sbjct 121 NLHLHLEHEVDAERVVEVKRISTAATLSLADSIQRALPELGRSGSLDILLAAYSLAATLW 180
Query 181 QIANPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGS 227
Q+ANPPERLTDAYAEEPE++PPEWNLDFA+ALTRLLTAT +GL+ S
Sbjct 181 QVANPPERLTDAYAEEPEVVPPEWNLDFASALTRLLTATCIGLIPQS 227
>gi|183980797|ref|YP_001849088.1| putative regulatory protein [Mycobacterium marinum M]
gi|183174123|gb|ACC39233.1| conserved hypothetical regulatory protein [Mycobacterium marinum
M]
Length=245
Score = 347 bits (889), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 194/227 (86%), Positives = 208/227 (92%), Gaps = 0/227 (0%)
Query 1 VRYPLAVAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAV 60
VRYPLAVAQL F+RARTEENKRQRAAALVEAARS+A ETGVASVTLTAVA RAGIHYSAV
Sbjct 18 VRYPLAVAQLTFRRARTEENKRQRAAALVEAARSMASETGVASVTLTAVASRAGIHYSAV 77
Query 61 RRYFTSHKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLA 120
RRYFTSHKEVLLHLAAEGW RWS TVC +L +PGPM+ RVA ALA+GLAADPLFCDLLA
Sbjct 78 RRYFTSHKEVLLHLAAEGWQRWSNTVCGELSQPGPMTESRVAAALADGLAADPLFCDLLA 137
Query 121 NLHLHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLW 180
NLHLHLE EV+VDRV+EVKRTS AAVIAL DAIE+ALPALGR+GAFD+LLAAYSL ATLW
Sbjct 138 NLHLHLEHEVEVDRVVEVKRTSTAAVIALADAIENALPALGRAGAFDVLLAAYSLGATLW 197
Query 181 QIANPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGS 227
QIANPP+RLTD YAEEP++LPPEWNLDFAAALTRLLTAT GL A S
Sbjct 198 QIANPPQRLTDVYAEEPDVLPPEWNLDFAAALTRLLTATCCGLTAKS 244
>gi|296168052|ref|ZP_06850118.1| transcriptional regulator [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896859|gb|EFG76487.1| transcriptional regulator [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=223
Score = 343 bits (880), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 173/221 (79%), Positives = 189/221 (86%), Gaps = 1/221 (0%)
Query 7 VAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTS 66
+AQL FQRARTEE KRQRA ALVEAARSLALETGVASVTLTAVA RAGIHYSAVRRYF+S
Sbjct 1 MAQLTFQRARTEEKKRQRAEALVEAARSLALETGVASVTLTAVASRAGIHYSAVRRYFSS 60
Query 67 HKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLHL 126
HKEVLLHL+AEGW RWS TV E+L EPGP S +A L N LA DPLFCDLLANLHLHL
Sbjct 61 HKEVLLHLSAEGWVRWSTTVSEKLAEPGPKSPSLIAATLVNALAEDPLFCDLLANLHLHL 120
Query 127 EQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPP 186
E EVD DRVIEVKR AA ++L D+IE ALPALGRSG+ DILLAAYSLAATLWQ+ANPP
Sbjct 121 EHEVDADRVIEVKRIRTAATLSLADSIECALPALGRSGSLDILLAAYSLAATLWQVANPP 180
Query 187 ERLTDAYAEEPE-LLPPEWNLDFAAALTRLLTATLLGLLAG 226
ERL DAYA++P ++PPEWNLDFA+ALTRLLTAT GL+ G
Sbjct 181 ERLNDAYADDPGVVVPPEWNLDFASALTRLLTATCEGLIEG 221
>gi|240169834|ref|ZP_04748493.1| putative regulatory protein [Mycobacterium kansasii ATCC 12478]
Length=222
Score = 341 bits (875), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 192/219 (88%), Positives = 203/219 (93%), Gaps = 0/219 (0%)
Query 7 VAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTS 66
+AQL F+RARTEENKR+RAAAL+EAARSLA ETGVASVTLTAVA RAGIHYSAVRRYFTS
Sbjct 1 MAQLTFRRARTEENKRRRAAALMEAARSLASETGVASVTLTAVANRAGIHYSAVRRYFTS 60
Query 67 HKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLHL 126
HKEVLLHLAAEGW RWS TVCE L EPGPMS RVA ALA+GLAADPLFCDLLANLHLHL
Sbjct 61 HKEVLLHLAAEGWVRWSKTVCESLSEPGPMSHSRVAAALADGLAADPLFCDLLANLHLHL 120
Query 127 EQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPP 186
E EVDVDRV+EVKRTS AAVIAL DAIE+ALP+LGRSGAFDILLAAYSLAATLWQIANPP
Sbjct 121 EHEVDVDRVVEVKRTSTAAVIALADAIENALPSLGRSGAFDILLAAYSLAATLWQIANPP 180
Query 187 ERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLA 225
ERLTDAYAEEP++LPPEWNLDFA+ALTRLLTAT GL A
Sbjct 181 ERLTDAYAEEPDVLPPEWNLDFASALTRLLTATCFGLTA 219
>gi|254819778|ref|ZP_05224779.1| hypothetical protein MintA_07634 [Mycobacterium intracellulare
ATCC 13950]
Length=222
Score = 339 bits (869), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/218 (78%), Positives = 184/218 (85%), Gaps = 0/218 (0%)
Query 7 VAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTS 66
+AQL FQRARTEE KRQRA ALVEAARSLA+ETGVASVTLTAVA RAGIHYSAVRRYFTS
Sbjct 1 MAQLTFQRARTEEKKRQRAEALVEAARSLAMETGVASVTLTAVASRAGIHYSAVRRYFTS 60
Query 67 HKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLHL 126
HKEVLL L+AEGW RWS TV ++L EPG S R+A LA LA DPLFCDLLANLHLHL
Sbjct 61 HKEVLLRLSAEGWVRWSNTVSDKLAEPGAKSPSRIAGTLAEALADDPLFCDLLANLHLHL 120
Query 127 EQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPP 186
E EVD +RVIEV+R S AA +L DAIE ALP LGRSG+ DILLAAYSLAATLWQ+ANPP
Sbjct 121 EHEVDAERVIEVRRISTAATRSLADAIERALPELGRSGSLDILLAAYSLAATLWQVANPP 180
Query 187 ERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLL 224
LTD YAEEPE+ PPEWNLDFA ALTRLLTAT +GL+
Sbjct 181 ADLTDVYAEEPEVAPPEWNLDFATALTRLLTATCIGLI 218
>gi|118464786|ref|YP_883825.1| TetR family transcriptional regulator [Mycobacterium avium 104]
gi|118166073|gb|ABK66970.1| transcriptional regulator, TetR family protein [Mycobacterium
avium 104]
gi|336460313|gb|EGO39213.1| transcriptional regulator, tetR family [Mycobacterium avium subsp.
paratuberculosis S397]
Length=200
Score = 315 bits (807), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 154/199 (78%), Positives = 175/199 (88%), Gaps = 0/199 (0%)
Query 29 VEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKEVLLHLAAEGWARWSGTVCE 88
+EAARSLALETGVASVTLTAVA RAGIHYSAVRRYFTSHKEVLLHL+AEGW RWS TV +
Sbjct 1 MEAARSLALETGVASVTLTAVARRAGIHYSAVRRYFTSHKEVLLHLSAEGWVRWSNTVSD 60
Query 89 QLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLHLEQEVDVDRVIEVKRTSIAAVIA 148
+L +PG + R+AE LA+ LA DPLFCDLLANLHLHLE EVD +RV+EVKR S AA ++
Sbjct 61 KLAQPGAATPSRIAETLADALADDPLFCDLLANLHLHLEHEVDAERVVEVKRISTAATLS 120
Query 149 LVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPPERLTDAYAEEPELLPPEWNLDF 208
L D+I+ ALP LGRSG+ DILLAAYSLAATLWQ+ANPPERLTDAYAEEPE++PPEWNLDF
Sbjct 121 LADSIQRALPELGRSGSLDILLAAYSLAATLWQVANPPERLTDAYAEEPEVVPPEWNLDF 180
Query 209 AAALTRLLTATLLGLLAGS 227
A+ALTRLLTAT +GL+ S
Sbjct 181 ASALTRLLTATCIGLIPQS 199
>gi|254777135|ref|ZP_05218651.1| hypothetical protein MaviaA2_21049 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=200
Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/199 (77%), Positives = 175/199 (88%), Gaps = 0/199 (0%)
Query 29 VEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKEVLLHLAAEGWARWSGTVCE 88
+EAARSLALETGVASVTLTAVA RAGIHYSAVRRYFTSHKEVLLHL+AEGW +WS TV +
Sbjct 1 MEAARSLALETGVASVTLTAVARRAGIHYSAVRRYFTSHKEVLLHLSAEGWVQWSNTVSD 60
Query 89 QLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLHLEQEVDVDRVIEVKRTSIAAVIA 148
+L +PG + R+AE LA+ LA DPLFCDLLANLHLHLE EVD +RV+EVKR S AA ++
Sbjct 61 KLAQPGAATPSRIAETLADALADDPLFCDLLANLHLHLEHEVDAERVVEVKRISTAATLS 120
Query 149 LVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPPERLTDAYAEEPELLPPEWNLDF 208
L D+I+ ALP LGRSG+ DILLAAYSLAATLWQ+ANPPERLTDAYAEEPE++PPEWNLDF
Sbjct 121 LADSIQRALPELGRSGSLDILLAAYSLAATLWQVANPPERLTDAYAEEPEVVPPEWNLDF 180
Query 209 AAALTRLLTATLLGLLAGS 227
A+ALTRLLTAT +GL+ S
Sbjct 181 ASALTRLLTATCIGLIPQS 199
>gi|169629385|ref|YP_001703034.1| transcriptional regulator [Mycobacterium abscessus ATCC 19977]
gi|169241352|emb|CAM62380.1| Possible transcriptional regulatory protein [Mycobacterium abscessus]
Length=221
Score = 306 bits (783), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 151/218 (70%), Positives = 178/218 (82%), Gaps = 1/218 (0%)
Query 7 VAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTS 66
+AQL FQRART+E KRQRAAA+VEAARSLA+E+GV SVTLTAVA RAG+HYSAVRRYF+S
Sbjct 1 MAQLTFQRARTDEKKRQRAAAIVEAARSLAVESGVTSVTLTAVANRAGVHYSAVRRYFSS 60
Query 67 HKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLHL 126
HKEVLLHLAAEGW RWS TVC L EPGP S RVAE+L +GL DPLFCDLLAN HLHL
Sbjct 61 HKEVLLHLAAEGWTRWSATVCAALAEPGPGSPARVAESLVHGLVDDPLFCDLLANQHLHL 120
Query 127 EQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPP 186
E EVDV+RV EVK+ S AV+++ ++IE LP +GR G+ DIL+A +SLAA LWQIA+PP
Sbjct 121 EHEVDVERVAEVKQISNVAVMSIAESIERTLPEIGRKGSLDILVAGFSLAAMLWQIAHPP 180
Query 187 ERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLL 224
E L Y EP +PP+W+LDF ALTRLLTAT +G++
Sbjct 181 EGLEHDYRSEPG-VPPDWSLDFEPALTRLLTATCIGIV 217
>gi|342859046|ref|ZP_08715700.1| hypothetical protein MCOL_09218 [Mycobacterium colombiense CECT
3035]
gi|342133287|gb|EGT86490.1| hypothetical protein MCOL_09218 [Mycobacterium colombiense CECT
3035]
Length=192
Score = 305 bits (781), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 149/191 (79%), Positives = 166/191 (87%), Gaps = 0/191 (0%)
Query 37 LETGVASVTLTAVAGRAGIHYSAVRRYFTSHKEVLLHLAAEGWARWSGTVCEQLGEPGPM 96
+ETGVASVTLTAVA RAGIHYSAVRRYFTSHKEVLLHL+AEGW RWS TV E+L EPG
Sbjct 1 METGVASVTLTAVASRAGIHYSAVRRYFTSHKEVLLHLSAEGWVRWSNTVSEKLAEPGAK 60
Query 97 SAPRVAEALANGLAADPLFCDLLANLHLHLEQEVDVDRVIEVKRTSIAAVIALVDAIESA 156
S R+AE LA LA DPLFCDLLANLHLHLE EVD +RVIEV+R S AA ++L D+I SA
Sbjct 61 SPSRIAETLAEALADDPLFCDLLANLHLHLEHEVDAERVIEVRRISTAATLSLADSIGSA 120
Query 157 LPALGRSGAFDILLAAYSLAATLWQIANPPERLTDAYAEEPELLPPEWNLDFAAALTRLL 216
LP LGRSG+ DILLAAYSLAATLWQ+ANPPE+LTD YAEEPE++PPEWNLDFA+ALTRLL
Sbjct 121 LPELGRSGSLDILLAAYSLAATLWQVANPPEQLTDVYAEEPEVVPPEWNLDFASALTRLL 180
Query 217 TATLLGLLAGS 227
TAT +GL+A S
Sbjct 181 TATCVGLIAES 191
>gi|333992659|ref|YP_004525273.1| regulatory protein [Mycobacterium sp. JDM601]
gi|333488627|gb|AEF38019.1| putative regulatory protein [Mycobacterium sp. JDM601]
Length=198
Score = 276 bits (705), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 141/196 (72%), Positives = 161/196 (83%), Gaps = 1/196 (0%)
Query 29 VEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKEVLLHLAAEGWARWSGTVCE 88
+EAARS+ALE GVASVTLTAVA RAG+HYSAVRRYF+S+KEVLL LAAE W RWS VC
Sbjct 1 MEAARSVALEAGVASVTLTAVAARAGVHYSAVRRYFSSYKEVLLRLAAESWQRWSAAVCT 60
Query 89 QLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLHLEQEVDVDRVIEVKRTSIAAVIA 148
L +PGPMS +V E L +GLAADPLFCDLL+NLHLHLE EVD +RVIEV+R S AAV+A
Sbjct 61 GLDQPGPMSPEQVVEILVSGLAADPLFCDLLSNLHLHLEHEVDAERVIEVRRVSTAAVMA 120
Query 149 LVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPPERLTDAYAEEPELLPPEWNLDF 208
AIE ALP LG GA D+LLAAYSL + LWQ A+PPE LT+AY++EPELL P+WNLDF
Sbjct 121 GAGAIERALPGLGPRGALDLLLAAYSLGSVLWQRAHPPETLTNAYSDEPELL-PDWNLDF 179
Query 209 AAALTRLLTATLLGLL 224
ALTRLLTAT +GLL
Sbjct 180 TTALTRLLTATCVGLL 195
>gi|169628229|ref|YP_001701878.1| transcriptional regulator TetR [Mycobacterium abscessus ATCC
19977]
gi|169240196|emb|CAM61224.1| Possible transcriptional regulatory protein TetR [Mycobacterium
abscessus]
Length=218
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/216 (53%), Positives = 153/216 (71%), Gaps = 1/216 (0%)
Query 7 VAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTS 66
+ L F+RAR+EENKRQRAA +VEAAR+LALE+GVASVTLT +A RAG+H+SAVRRYF+S
Sbjct 1 MTSLSFRRARSEENKRQRAATIVEAARALALESGVASVTLTGLANRAGVHHSAVRRYFSS 60
Query 67 HKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLHL 126
HKEVLL L+ EG A + +VC L S V L+ L PLFCDLL + ++H
Sbjct 61 HKEVLLRLSTEGMAALAESVCAALEGSQERSPIEVGAILSGALVDAPLFCDLLGSHYVHF 120
Query 127 EQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPP 186
E EV +D V E +R + AA + +V+AIE + P + R GA DI++++++LAA LWQ A+PP
Sbjct 121 EHEVVIDHVREAQRVNQAAAMTIVEAIERSAPQIDREGALDIVISSFALAAMLWQFAHPP 180
Query 187 ERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLG 222
+ L ++ EP +P +W+ DF + LTRLLTAT +G
Sbjct 181 KGLEHDFSNEPG-IPDDWDTDFGSTLTRLLTATCIG 215
>gi|294633668|ref|ZP_06712226.1| TetR-family transcriptional regulator [Streptomyces sp. e14]
gi|292830310|gb|EFF88661.1| TetR-family transcriptional regulator [Streptomyces sp. e14]
Length=226
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/223 (39%), Positives = 127/223 (57%), Gaps = 3/223 (1%)
Query 6 AVAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFT 65
++++ GFQRAR+ K+ R A+++AAR+L GV VTLT +A G+H SA+ RYF
Sbjct 4 SMSEPGFQRARSAAAKQAREQAILDAARALGRRHGVRDVTLTDIAAAVGMHKSALLRYFE 63
Query 66 SHKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLH 125
+ +++ L L AEGW +WS +C L + + VAE ++ LAA P+FCDLLA L+
Sbjct 64 TREQIFLELTAEGWRQWSAELCGDLSDRARATPAEVAEVVSGTLAARPMFCDLLAQAPLN 123
Query 126 LEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANP 185
LE+ V ++ V K ++ V + + L L A D++ A +A LWQ+A P
Sbjct 124 LERNVSIESVRSFKLVTLGEVGRIGRELHRLL-GLSELQAVDMIATATGMAGALWQMATP 182
Query 186 PERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGSP 228
RL + YA +P L ++ LTR+LTA L GL A +P
Sbjct 183 GPRLRELYASDPRL--AHAAVEVEPRLTRVLTAYLTGLGAETP 223
>gi|111224743|ref|YP_715537.1| TetR family transcriptional regulator [Frankia alni ACN14a]
gi|111152275|emb|CAJ64007.1| Putative transcriptional TetR-family regulator [Frankia alni
ACN14a]
Length=237
Score = 141 bits (355), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/231 (42%), Positives = 126/231 (55%), Gaps = 10/231 (4%)
Query 1 VRYPLAVAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAV 60
+RY V+ FQRAR+ E KR R AA+++AAR L + GV VTLT +A G+H SA+
Sbjct 1 MRYDRPVSTDDFQRARSPEAKRVREAAILDAARRLGEQHGVRQVTLTDIAAAVGMHKSAM 60
Query 61 RRYFTSHKEVLLHLAAEGWARWSGTVCEQL--------GEPGPMSAPRVAEALANGLAAD 112
RYF + +E+ L L AEGW W+ VC L P A VA A+ LAA
Sbjct 61 LRYFETREEIFLRLTAEGWREWAPAVCASLRALTRPVADASAPADADAVAAVFASTLAAR 120
Query 113 PLFCDLLANLHLHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAA 172
LFCDLLA ++LE+ V V RV E K T+ A+ +V A+ +ALP L D++ AA
Sbjct 121 ALFCDLLAQAPMNLERNVSVARVREFKLTTRGALAEIVAAVRAALPGLPEGSVVDLVAAA 180
Query 173 YSLAATLWQIANPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGL 223
+LA T WQIA P + Y +P L +D L R+L A L GL
Sbjct 181 TALAGTFWQIATPSPEIAALYRADPRL--AHAIVDVEPRLARILAAMLRGL 229
>gi|329935833|ref|ZP_08285636.1| TetR family transcriptional regulator [Streptomyces griseoaurantiacus
M045]
gi|329304676|gb|EGG48551.1| TetR family transcriptional regulator [Streptomyces griseoaurantiacus
M045]
Length=246
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/188 (43%), Positives = 110/188 (59%), Gaps = 1/188 (0%)
Query 12 FQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKEVL 71
F+RAR+ E K+ R A+++EAAR L E + VTLT +A G+H SA+ RYF + +++
Sbjct 7 FRRARSTEAKQAREASILEAARRLGRERAIREVTLTDIAAEVGMHKSALLRYFETREQIF 66
Query 72 LHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLHLEQEVD 131
L L AEGW WS T+ LG +A VAE A LAA PLFCDLLA L+LE+ V
Sbjct 67 LELTAEGWREWSATLRADLGTRREATAAEVAEVFAGTLAARPLFCDLLAQAPLNLERNVS 126
Query 132 VDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPPERLTD 191
++ V K ++ V AL+ A L L D++ A +A LWQ+A+P RL +
Sbjct 127 LETVRAFKLVTLHEV-ALIGAELDRLLGLDEQQVLDMISTATGMAGALWQMASPGPRLRE 185
Query 192 AYAEEPEL 199
YA++P L
Sbjct 186 LYADDPRL 193
>gi|345013503|ref|YP_004815857.1| regulatory protein TetR [Streptomyces violaceusniger Tu 4113]
gi|344039852|gb|AEM85577.1| regulatory protein TetR [Streptomyces violaceusniger Tu 4113]
Length=227
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 119/215 (56%), Gaps = 3/215 (1%)
Query 12 FQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKEVL 71
FQRAR+ + K+ R A+++AAR+L GV VTLT +A G+H SA+ RYF + +++
Sbjct 6 FQRARSTQAKQAREEAILDAARTLGRRRGVRDVTLTDIAAAVGMHKSALLRYFETREQIF 65
Query 72 LHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLHLEQEVD 131
L L AEGW +WS + L + VAE +A LAA P+FCDLLA L+LE+ V
Sbjct 66 LLLTAEGWRQWSADLRGDLERRAHATPTEVAEVVAATLAARPMFCDLLAQAPLNLERNVS 125
Query 132 VDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPPERLTD 191
+D V K + I L+D L L S D++ AA S+A LWQ+A P RL +
Sbjct 126 IDSVRAFKLGTFKE-IELIDGELRRLLGLTESQTVDLIAAATSMAGALWQMATPGPRLRE 184
Query 192 AYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAG 226
Y +P L ++ L R+L A L GL AG
Sbjct 185 LYETDPRL--GHAVVEVEPRLRRVLAAFLTGLDAG 217
>gi|289766758|ref|ZP_06526136.1| TetR family transcriptional regulator [Streptomyces lividans
TK24]
gi|289696957|gb|EFD64386.1| TetR family transcriptional regulator [Streptomyces lividans
TK24]
Length=234
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/217 (39%), Positives = 121/217 (56%), Gaps = 5/217 (2%)
Query 11 GFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKEV 70
GFQRAR+ + K+QR A+++AAR L E G+ +TLT +A G+H SA+ RYF + +++
Sbjct 22 GFQRARSAQAKQQREEAILDAARELGTERGIREITLTDIAATVGMHKSALLRYFETREQI 81
Query 71 LLHLAAEGWARWSGTVCEQLGEPGPMSAPR-VAEALANGLAADPLFCDLLANLHLHLEQE 129
L + AEGW WS +C +L E P +AP V + A LAA PLFCDLLA L+LE+
Sbjct 82 FLKITAEGWKEWSAELCARLREL-PGAAPDAVGQVFAATLAARPLFCDLLAQAPLNLERN 140
Query 130 VDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPPERL 189
V V+ V K ++ V + A L + + A D++ A SLA LWQ+A P +
Sbjct 141 VSVESVRSFKIATLDEV-GCIGAELRRLLGVDETQAVDVIATATSLAGALWQMATPGPHI 199
Query 190 TDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAG 226
Y +P L ++ L R+L A L G+ G
Sbjct 200 QTLYRSDPRL--AHAVVEVEPRLNRVLGALLRGIADG 234
>gi|21226064|ref|NP_631843.1| TetR family transcriptional regulator [Streptomyces coelicolor
A3(2)]
gi|9843824|emb|CAC03633.1| putative TetR-family transcriptional regulator [Streptomyces
coelicolor A3(2)]
Length=223
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/217 (39%), Positives = 121/217 (56%), Gaps = 5/217 (2%)
Query 11 GFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKEV 70
GFQRAR+ + K+QR A+++AAR L E G+ +TLT +A G+H SA+ RYF + +++
Sbjct 11 GFQRARSAQAKQQREEAILDAARELGTERGIREITLTDIAATVGMHKSALLRYFETREQI 70
Query 71 LLHLAAEGWARWSGTVCEQLGEPGPMSAPR-VAEALANGLAADPLFCDLLANLHLHLEQE 129
L + AEGW WS +C +L E P +AP V + A LAA PLFCDLLA L+LE+
Sbjct 71 FLKITAEGWKEWSAELCARLREL-PGAAPDAVGQVFAATLAARPLFCDLLAQAPLNLERN 129
Query 130 VDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPPERL 189
V V+ V K ++ V + A L + + A D++ A SLA LWQ+A P +
Sbjct 130 VSVESVRSFKIATLDEV-GRIGAELRRLLGVDETQAVDVIATATSLAGALWQMATPGPHI 188
Query 190 TDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAG 226
Y +P L ++ L R+L A L G+ G
Sbjct 189 QTLYRSDPRL--AHAVVEVEPRLNRVLGALLRGIADG 223
>gi|213424057|pdb|2ZCX|A Chain A, Crystal Structure Of Tetr Family Transcriptional Regulator
Sco7815
Length=231
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/217 (39%), Positives = 121/217 (56%), Gaps = 5/217 (2%)
Query 11 GFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKEV 70
GFQRAR+ + K+QR A+++AAR L E G+ +TLT +A G+H SA+ RYF + +++
Sbjct 11 GFQRARSAQAKQQREEAILDAARELGTERGIREITLTDIAATVGMHKSALLRYFETREQI 70
Query 71 LLHLAAEGWARWSGTVCEQLGEPGPMSAPR-VAEALANGLAADPLFCDLLANLHLHLEQE 129
L + AEGW WS +C +L E P +AP V + A LAA PLFCDLLA L+LE+
Sbjct 71 FLKITAEGWKEWSAELCARLREL-PGAAPDAVGQVFAATLAARPLFCDLLAQAPLNLERN 129
Query 130 VDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPPERL 189
V V+ V K ++ V + A L + + A D++ A SLA LWQ+A P +
Sbjct 130 VSVESVRSFKIATLDEV-GRIGAELRRLLGVDETQAVDVIATATSLAGALWQMATPGPHI 188
Query 190 TDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAG 226
Y +P L ++ L R+L A L G+ G
Sbjct 189 QTLYRSDPRL--AHAVVEVEPRLNRVLGALLRGIADG 223
>gi|152966285|ref|YP_001362069.1| TetR family transcriptional regulator [Kineococcus radiotolerans
SRS30216]
gi|151360802|gb|ABS03805.1| transcriptional regulator, TetR family [Kineococcus radiotolerans
SRS30216]
Length=240
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/185 (42%), Positives = 104/185 (57%), Gaps = 1/185 (0%)
Query 3 YPLAVAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRR 62
YP V FQRAR+ K+QRA L+EAAR+LA E + ++TLTA+A RAG+H S VRR
Sbjct 5 YPERVPPPSFQRARSALRKQQRATDLLEAARALACEQSLRTLTLTAIAARAGVHVSGVRR 64
Query 63 YFTSHKEVLLHLAAEGWARWSGTVCEQ-LGEPGPMSAPRVAEALANGLAADPLFCDLLAN 121
YF S +++LL LA + W W V LG P+SA + LA+ PLFCDL+ +
Sbjct 65 YFASREDILLTLAGQEWRVWGAEVTAAVLGAQAPISAHDLGRILASAFVQHPLFCDLMGH 124
Query 122 LHLHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQ 181
+ L LE E D V + A+ + DA+ + +P+L R A ++L A LA LW
Sbjct 125 VPLSLEPEAAPDCVRTYELIRAGALGEVADAVAAQVPSLDRPRAAELLATAVVLAGPLWH 184
Query 182 IANPP 186
P
Sbjct 185 QTTQP 189
>gi|256391752|ref|YP_003113316.1| TetR family transcriptional regulator [Catenulispora acidiphila
DSM 44928]
gi|256357978|gb|ACU71475.1| transcriptional regulator, TetR family [Catenulispora acidiphila
DSM 44928]
Length=232
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/228 (39%), Positives = 126/228 (56%), Gaps = 15/228 (6%)
Query 12 FQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKEVL 71
F+RAR+ E K+ R AA++EAA LALE G+ +VTLT +A G+H SA+ RYF + +++
Sbjct 6 FERARSAEAKQAREAAILEAAARLALEHGIRTVTLTDIAEAVGMHKSAMLRYFETREDIF 65
Query 72 LHLAAEGWARWSGTVCEQLGEPG------------PMSAPRVAEALANGLAADPLFCDLL 119
L LA W WS +V +QL +A VA ALA+ L + PLFCDLL
Sbjct 66 LQLATTAWREWSASVRDQLARLSAGTGRGARRREWEQTAGEVAAALASSLVSRPLFCDLL 125
Query 120 ANLHLHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATL 179
A+ L+LE+ V VDRV K +IA V A+ + + P L + A ++ A ++A L
Sbjct 126 AHTPLNLERNVSVDRVRAFKILAIAEVAAIAATLSTITP-LSVNEATSVVTTATAMAGAL 184
Query 180 WQIANPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGS 227
WQ+A P L Y +P+L +D LT +L+A + G A S
Sbjct 185 WQMAAPRTTLRTLYESDPDL--AHAVVDVEPRLTDILSALITGYAARS 230
>gi|302519666|ref|ZP_07272008.1| regulatory protein [Streptomyces sp. SPB78]
gi|318058133|ref|ZP_07976856.1| Transcriptional regulator, TetR family protein [Streptomyces
sp. SA3_actG]
gi|318076014|ref|ZP_07983346.1| Transcriptional regulator, TetR family protein [Streptomyces
sp. SA3_actF]
gi|302428561|gb|EFL00377.1| regulatory protein [Streptomyces sp. SPB78]
Length=229
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/219 (42%), Positives = 122/219 (56%), Gaps = 6/219 (2%)
Query 13 QRARTEENKRQRAAALVEAARSLALETG-VASVTLTAVAGRAGIHYSAVRRYFTSHKEVL 71
+RAR++E K+QRA L++AAR LA TG V +TL AV AG+H SA+RRYF S +E+L
Sbjct 5 RRARSQEAKQQRAEDLLDAARRLATGTGGVRCLTLAAVTEAAGLHPSAIRRYFDSKEELL 64
Query 72 LHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLHLEQEVD 131
L LA W W V + +S AEAL +GL A PL CDL ++ L LE EV
Sbjct 65 LELAEREWVDWREEVLRRARAATGLSPEETAEALVSGLIARPLLCDLFTHIPLSLEGEVP 124
Query 132 VDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPPERLTD 191
++R K S A+V+ + +A+ A A+ D++ A + A WQIA+P L
Sbjct 125 LERARRYKELSFASVVTMSEALAEA-GAMTAPQVADLIAATAAQTAHAWQIAHPTATLAT 183
Query 192 AYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGSPCE 230
Y + PEL P +F A + RLL AT GL SP E
Sbjct 184 LYEQNPELSHP--AREFEARVRRLLRATARGLT--SPGE 218
>gi|300785538|ref|YP_003765829.1| TetR family transcriptional regulator [Amycolatopsis mediterranei
U32]
gi|299795052|gb|ADJ45427.1| TetR family transcriptional regulator [Amycolatopsis mediterranei
U32]
Length=214
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/193 (38%), Positives = 102/193 (53%), Gaps = 5/193 (2%)
Query 7 VAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTS 66
++Q F RAR E K QR A++ AAR LALE+GV +V+L +VA G+ S V RYF +
Sbjct 1 MSQSMFMRARRPEQKEQRRVAILAAARELALESGVRNVSLGSVATAVGLAKSNVTRYFGT 60
Query 67 HKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLHL 126
+E+ L LA+ W W+ V +L + V + LA LA LFCDLL + L
Sbjct 61 REEIYLELASACWRDWADEVARRLA-----AGNAVVDVLAETLAERTLFCDLLGHTATSL 115
Query 127 EQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPP 186
E V V + KR + + L A+ A P L F++ AA LA ++ ANPP
Sbjct 116 EHNVSVPAARDFKRLVLGVLTELGAAVARACPELTEGEGFELAGAASGLAGMVYPAANPP 175
Query 187 ERLTDAYAEEPEL 199
L + YA+ P+L
Sbjct 176 PTLREVYAQNPDL 188
>gi|340526988|gb|AEK42193.1| TetR family transcriptional regulator [Amycolatopsis mediterranei
S699]
Length=210
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/188 (39%), Positives = 99/188 (53%), Gaps = 5/188 (2%)
Query 12 FQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKEVL 71
F RAR E K QR A++ AAR LALE+GV +V+L +VA G+ S V RYF + +E+
Sbjct 2 FMRARRPEQKEQRRVAILAAARELALESGVRNVSLGSVATAVGLAKSNVTRYFGTREEIY 61
Query 72 LHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLHLEQEVD 131
L LA+ W W+ V +L + V + LA LA LFCDLL + LE V
Sbjct 62 LELASACWRDWADEVARRLA-----AGNAVVDVLAETLAERTLFCDLLGHTATSLEHNVS 116
Query 132 VDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPPERLTD 191
V + KR + + L A+ A P L F++ AA LA ++ ANPP L +
Sbjct 117 VPAARDFKRLVLGVLTELGAAVARACPELTEGEGFELAGAASGLAGMVYPAANPPPTLRE 176
Query 192 AYAEEPEL 199
YA+ P+L
Sbjct 177 VYAQNPDL 184
>gi|254472983|ref|ZP_05086381.1| transcriptional regulator, TetR family [Pseudovibrio sp. JE062]
gi|211957704|gb|EEA92906.1| transcriptional regulator, TetR family [Pseudovibrio sp. JE062]
Length=220
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/217 (32%), Positives = 109/217 (51%), Gaps = 5/217 (2%)
Query 11 GFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKEV 70
FQRAR+ E K QR L+ AA + + GV +TL A+A RAGI S + RYF + + +
Sbjct 5 SFQRARSAEAKAQRHNDLIRAATCVLEQDGVDGLTLQAIASRAGIVKSNIYRYFETREAI 64
Query 71 LLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLHLEQEV 130
L+ L + + ++ G M+ +A+ L+ A+ C+L++ + +E+ +
Sbjct 65 LVELLLRDFVELIEDMETKVS--GEMAPADMAQLLSEMFASRQRLCELMSEIAPTMEKNI 122
Query 131 DVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPPERLT 190
+D + KR +A ++ LP L A + + + A LW + NPP L
Sbjct 123 SIDCIRNFKRALLAEASRATSVLQKGLPWLNAEEAMAVFFSIHVFVAGLWPVTNPPPALV 182
Query 191 DAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGS 227
Y EEPE P ++ +FA AL ++TA LLGL A
Sbjct 183 TLY-EEPEFAPLKY--EFAPALFGMITAHLLGLEASK 216
>gi|302867003|ref|YP_003835640.1| regulatory protein TetR [Micromonospora aurantiaca ATCC 27029]
gi|315506559|ref|YP_004085446.1| regulatory protein TetR [Micromonospora sp. L5]
gi|302569862|gb|ADL46064.1| regulatory protein TetR [Micromonospora aurantiaca ATCC 27029]
gi|315413178|gb|ADU11295.1| regulatory protein TetR [Micromonospora sp. L5]
Length=221
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/221 (36%), Positives = 107/221 (49%), Gaps = 9/221 (4%)
Query 10 LGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKE 69
+ FQRARTEE + R A+++ A ++ E VA+VTL ++ R G+ V RYF S +
Sbjct 1 MTFQRARTEEQREIRRRAILDVASAMLDEMPVAAVTLNELSRRVGLAKPNVLRYFESREA 60
Query 70 VLLHLAAEGWARWSGTVCEQLGE------PGPMSAPRVAEALANGLAADPLFCDLLANLH 123
VLL L W + ++L + P A VA ++ LA + CDL
Sbjct 61 VLLELLDRYLREWLTELADELADGVDANLPMAERATAVAGIVSRSLARRSVMCDLFGAQG 120
Query 124 LHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIA 183
LE V V+ V KR S+ + + D + LP LG A L LA L +
Sbjct 121 SVLEHNVSVEVVARYKRASLDRLATMTDLMRKYLPELG-GNAMLFSLQTMVLAGALSAYS 179
Query 184 NPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLL 224
PP L AY EPEL +L+ A +LT LTATLLG+L
Sbjct 180 TPPPSLAAAYRAEPEL--ARLHLEMADSLTMALTATLLGVL 218
>gi|295838399|ref|ZP_06825332.1| TetR-family transcriptional regulator [Streptomyces sp. SPB74]
gi|197695804|gb|EDY42737.1| TetR-family transcriptional regulator [Streptomyces sp. SPB74]
Length=223
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/212 (44%), Positives = 123/212 (59%), Gaps = 4/212 (1%)
Query 13 QRARTEENKRQRAAALVEAARSLALETG-VASVTLTAVAGRAGIHYSAVRRYFTSHKEVL 71
+RAR++E KRQRA L++AAR LA G V +TL AV AG+H SA+RRYF S +E+L
Sbjct 5 RRARSQEAKRQRAEDLLDAARRLAAGAGGVRFLTLAAVTEAAGLHPSAIRRYFDSKEELL 64
Query 72 LHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLHLEQEVD 131
L LA W W V + GE +S A+ LA GL A PL CDL ++ L LE EV
Sbjct 65 LELAEREWVDWREEVLRRAGEATGLSPEGTADLLAGGLLARPLLCDLFTHIPLSLEGEVP 124
Query 132 VDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPPERLTD 191
++R KR S ++V+A+ DA+ A A+ + D++ A + AA WQIA+P L
Sbjct 125 LERARHYKRLSFSSVVAMADALAGA-GAMTAAQVADLIAATAAQAAHAWQIAHPTATLAV 183
Query 192 AYAEEPELLPPEWNLDFAAALTRLLTATLLGL 223
Y + PEL P +F +TRLL AT GL
Sbjct 184 LYEQNPELSHP--AKEFEERVTRLLRATARGL 213
>gi|333026482|ref|ZP_08454546.1| putative TetR family transcriptional regulator [Streptomyces
sp. Tu6071]
gi|332746334|gb|EGJ76775.1| putative TetR family transcriptional regulator [Streptomyces
sp. Tu6071]
Length=221
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/221 (36%), Positives = 112/221 (51%), Gaps = 9/221 (4%)
Query 10 LGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKE 69
+ FQRAR+EE + R A+++ A ++ E VA V+L ++ R G+ S V RYF S +
Sbjct 1 MTFQRARSEEQREIRRRAILDTAATMLDEMPVAEVSLNELSRRVGLAKSNVLRYFESREA 60
Query 70 VLLHLAAEGWARWSGTVCEQLGE-----PGP-MSAPRVAEALANGLAADPLFCDLLANLH 123
VLL L + W + ++L E P + A R+AE L+ LA+ + CDL
Sbjct 61 VLLELLDDFLGDWLAVLADELAEGIEAQAAPEVRAERLAEILSRSLASRTVLCDLFGAQG 120
Query 124 LHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIA 183
LE V V+ V KR+S+A + +V+ + +P LG GA L + A L
Sbjct 121 GVLEHNVSVEVVKRHKRSSLAKLAGMVELVRRHVPELG-EGAEMFCLTSLISAGALAAYV 179
Query 184 NPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLL 224
PP L AY +EP L +LD AL LTA LLG+L
Sbjct 180 PPPPSLLAAYEDEPAL--GVLHLDLREALRISLTAALLGVL 218
>gi|302519699|ref|ZP_07272041.1| transcriptional regulator [Streptomyces sp. SPB78]
gi|302428594|gb|EFL00410.1| transcriptional regulator [Streptomyces sp. SPB78]
Length=221
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/221 (35%), Positives = 112/221 (51%), Gaps = 9/221 (4%)
Query 10 LGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKE 69
+ FQRAR+EE + R A+++ A ++ E VA V+L ++ R G+ S V RYF S +
Sbjct 1 MTFQRARSEEQREIRRRAILDTAATMLDEMPVAEVSLNELSRRVGLAKSNVLRYFESREA 60
Query 70 VLLHLAAEGWARWSGTVCEQL-----GEPGP-MSAPRVAEALANGLAADPLFCDLLANLH 123
VLL L + W + ++L E P + A R+AE L+ LA+ + CDL
Sbjct 61 VLLELLDDFLGDWLAVLADELAEGIAAEAAPEVRAERLAEILSRSLASRTVLCDLFGAQG 120
Query 124 LHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIA 183
LE V V+ V KR+S+A + +V+ + +P LG GA L + A L
Sbjct 121 GVLEHNVSVEVVKRHKRSSLAKLAGMVELVRRHVPELG-EGAEMFCLTSLISAGALAAYV 179
Query 184 NPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLL 224
PP L AY +EP L +LD AL LT+ LLG+L
Sbjct 180 PPPPSLLAAYEDEPAL--GVLHLDLREALRISLTSALLGVL 218
>gi|87121560|ref|ZP_01077448.1| probable TetR-family transcriptional regulator [Marinomonas sp.
MED121]
gi|86163092|gb|EAQ64369.1| probable TetR-family transcriptional regulator [Marinomonas sp.
MED121]
Length=216
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/207 (31%), Positives = 96/207 (47%), Gaps = 6/207 (2%)
Query 10 LGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKE 69
+ +QRART++ K +R A +AA +L E G V+ +A ++G S + RYFTS +E
Sbjct 1 MNWQRARTDDKKSERKEATYQAAFTLFKEKGYEGVSFNGIAAQSGFTKSKMYRYFTSKEE 60
Query 70 VLLHLAAEGWARWSGTVCEQLGE-PGPMSAPRVAEALANGLAADPLFCDLLANLHLHLEQ 128
V L++ + + W QL + + + A+A L P F DL + + LE
Sbjct 61 VFLNVFGDLFENWFNNCINQLKDFDQEEDSLKFAQAWVEILLKHPEFLDLTPLIFIALEA 120
Query 129 EVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPPER 188
+ +IE KR S + L I PAL AF L +Y+ A W + +
Sbjct 121 NSSYEELIEFKRKSKGLLYQLALEISRIYPALEGENAFQFLTLSYAATANYWAGSRQNDA 180
Query 189 LTDAYA-EEPELLPPEWNLDFAAALTR 214
L YA EE ++L P DF L R
Sbjct 181 LNQVYAIEEFQMLKP----DFERNLIR 203
>gi|699240|gb|AAA63003.1| u1740y [Mycobacterium leprae]
Length=67
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/67 (77%), Positives = 55/67 (83%), Gaps = 0/67 (0%)
Query 5 LAVAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYF 64
+ VAQL FQR+RTE NKRQR AA+VE A LALETGV SVTLTA AG AGIHYSAVRRYF
Sbjct 1 MVVAQLTFQRSRTEGNKRQRPAAVVETACPLALETGVTSVTLTADAGHAGIHYSAVRRYF 60
Query 65 TSHKEVL 71
TS+K L
Sbjct 61 TSYKHKL 67
>gi|326330989|ref|ZP_08197288.1| putative transcriptional regulator [Nocardioidaceae bacterium
Broad-1]
gi|325951200|gb|EGD43241.1| putative transcriptional regulator [Nocardioidaceae bacterium
Broad-1]
Length=221
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/221 (34%), Positives = 110/221 (50%), Gaps = 9/221 (4%)
Query 10 LGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKE 69
+ FQRAR++E + R A+++ A ++ E VA ++L ++ R G+ S V RYF S +
Sbjct 1 MTFQRARSDEQREIRRRAILDTAVAMLDEMPVAELSLNELSRRVGLAKSNVLRYFESREA 60
Query 70 VLLHLAAEGWARWSGTVCEQLG------EPGPMSAPRVAEALANGLAADPLFCDLLANLH 123
VLL L + RW + E+L P + A ++AE L+ LA P+ CDL+
Sbjct 61 VLLELLDDFLGRWLDELGEELAAGIEADAPPGVRAGQLAEILSRSLAERPVLCDLVGAQG 120
Query 124 LHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIA 183
LE V V+ V KR+S A + +V + LP +G GA L + A L
Sbjct 121 GVLEHNVSVEVVKRHKRSSHAKLETMVGLVRRHLPEVG-DGAQTFCLMSLISAGALAAYD 179
Query 184 NPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLL 224
PP L Y++EPEL +LD L TA L+G+L
Sbjct 180 PPPPSLLAVYSDEPEL--AVLHLDLREGLRTSCTAALVGVL 218
>gi|284033684|ref|YP_003383615.1| regulatory protein TetR [Kribbella flavida DSM 17836]
gi|283812977|gb|ADB34816.1| regulatory protein TetR [Kribbella flavida DSM 17836]
Length=220
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/220 (34%), Positives = 104/220 (48%), Gaps = 7/220 (3%)
Query 10 LGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKE 69
+ FQRAR+ E + +R A++ A + E VA +TL ++ R G+ S V YF S +
Sbjct 1 MTFQRARSPEQRAERRRAILATAAEMLAEQPVAQLTLNELSRRVGLAKSNVLNYFESREA 60
Query 70 VLLHLAAEGWARWSGTVCEQLGE-----PGPMSAPRVAEALANGLAADPLFCDLLANLHL 124
VLL L A W L P A +A A+A LAA P+ C+L++
Sbjct 61 VLLELMNGETAAWLAEFEAALSHVDPSRPAAERAESLARAVAETLAARPMLCELISAQAA 120
Query 125 HLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIAN 184
LE + D + KR +I LV AI +A+P LG GA D + + LA LW +
Sbjct 121 VLEHNISTDVALNFKRAAIGHSHRLVAAILAAVPELGEQGAADFVASVALLAGALWTHSR 180
Query 185 PPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLL 224
P + AY PEL ++FA AL + L GLL
Sbjct 181 PAPTMLAAYEAAPEL--AALRVEFAPALRTAADSLLFGLL 218
>gi|295838375|ref|ZP_06825308.1| transcriptional regulator [Streptomyces sp. SPB74]
gi|197695827|gb|EDY42760.1| transcriptional regulator [Streptomyces sp. SPB74]
Length=221
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/221 (35%), Positives = 110/221 (50%), Gaps = 9/221 (4%)
Query 10 LGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKE 69
+ FQRAR+EE + R A+++ A ++ E VA ++L ++ R G+ S V RYF S +
Sbjct 1 MTFQRARSEEQREIRRRAILDTAAAMLAEMPVAGLSLNELSRRVGLAKSNVLRYFESREA 60
Query 70 VLLHLAAEGWARWSGTVCEQLGE-----PGPMS-APRVAEALANGLAADPLFCDLLANLH 123
VLL L + W + ++L E P + A R+AE L LA+ + CDL
Sbjct 61 VLLELLDDFLGDWLAVLADELAEGIEAQAAPEARAERLAEILGRSLASRTVLCDLFGAQG 120
Query 124 LHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIA 183
LE V V+ V KR S+A + + + + +P LG GA L A A
Sbjct 121 GVLEHNVSVEVVKRHKRASLAKLAGMAELVRRHVPELG-DGAELFCLTALISAGAFAAYV 179
Query 184 NPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLL 224
PP L AYA+EP L +LD AL LT++LLG+L
Sbjct 180 PPPPSLLAAYADEPAL--GVLHLDLEEALRISLTSSLLGVL 218
>gi|256377424|ref|YP_003101084.1| TetR family transcriptional regulator [Actinosynnema mirum DSM
43827]
gi|255921727|gb|ACU37238.1| transcriptional regulator, TetR family [Actinosynnema mirum DSM
43827]
Length=227
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/195 (34%), Positives = 95/195 (49%), Gaps = 6/195 (3%)
Query 10 LGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKE 69
+ FQRAR+EE + R A+++ A ++ E VA ++L ++ R G+ S V RYF + +
Sbjct 1 MTFQRARSEEQREVRRQAILDTAAAMLAELPVAEISLNELSRRIGLAKSNVLRYFETREA 60
Query 70 VLLHLAAEGWARWSGTVCEQLGEPGPMS-----APRVAEALANGLAADPLFCDLLANLHL 124
VLL L W + E+LG+P P + A R+AE L+ LA P+ CDL
Sbjct 61 VLLELLNRFLREWLAAIAEELGDPAPDAPAQERAARLAEVLSRSLADRPVLCDLFGAQGS 120
Query 125 HLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIAN 184
LEQ V + + KR S+A + + +P LG S A L LA L
Sbjct 121 VLEQNVSAEVIARHKRASLATLADATALVRGHVPELGGS-AEAYCLQVLVLAGALSAYVP 179
Query 185 PPERLTDAYAEEPEL 199
PP L AY +P +
Sbjct 180 PPASLLAAYRADPTI 194
>gi|329940850|ref|ZP_08290130.1| transcriptional regulator [Streptomyces griseoaurantiacus M045]
gi|329300144|gb|EGG44042.1| transcriptional regulator [Streptomyces griseoaurantiacus M045]
Length=221
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/221 (34%), Positives = 104/221 (48%), Gaps = 9/221 (4%)
Query 10 LGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKE 69
+ FQRAR+EE + R A+++ ++ E VA V+L ++ R G+ S V RYF S +
Sbjct 1 MTFQRARSEEQREIRRRAILDTVAAMLEEMPVAEVSLNEISRRVGLAKSNVLRYFESREA 60
Query 70 VLLHLAAEGWARWSGTVCEQLGEPGPMSAPR------VAEALANGLAADPLFCDLLANLH 123
VLL L W + E+L AP AE L+ LA + CDL
Sbjct 61 VLLELLDSFLESWIAELTEELAAGVEADAPLQTRARGTAEILSRTLANRVVLCDLFGAQG 120
Query 124 LHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIA 183
LE+ V V+ V KR S+A + + + + +P LG L+ S A L
Sbjct 121 GVLERNVSVEVVKRHKRASLAKLSDMSELLRRHVPELGDQAPMFCLMGLAS-AGALSTYV 179
Query 184 NPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLL 224
PP L AYAEEP L NL+ AL T++LLG+L
Sbjct 180 PPPASLLTAYAEEPAL--GVLNLELREALKISFTSSLLGML 218
>gi|182677035|ref|YP_001831181.1| TetR family transcriptional regulator [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182632918|gb|ACB93692.1| transcriptional regulator, TetR family [Beijerinckia indica subsp.
indica ATCC 9039]
Length=221
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/221 (32%), Positives = 109/221 (50%), Gaps = 9/221 (4%)
Query 10 LGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKE 69
+ FQRAR EE + R +++ A ++ E +A V+L ++ R G+ S V RYF S +
Sbjct 1 MTFQRARNEEQREARRRLILDTAVAMLDEMPLAEVSLNELSRRVGLAKSNVLRYFESREA 60
Query 70 VLLHLAAEGWARWSGTVCEQL-----GEPGP-MSAPRVAEALANGLAADPLFCDLLANLH 123
VLL L + RW + +L + P + A ++AE L++ LA P CDL
Sbjct 61 VLLELLDDFLGRWLVDLAAELAGGIDAQAAPELRAAQLAEILSSSLADRPALCDLFGAQG 120
Query 124 LHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIA 183
LE V V+ + KR+S+ + + + + +P LG L++ S A L
Sbjct 121 GVLEHNVSVEVIKRHKRSSLGRLATMTELVRHHVPELGDGAQMFCLMSLLS-AGALSAYV 179
Query 184 NPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLL 224
PP L AYA+EP L +++ AL T+TLLG+L
Sbjct 180 PPPPSLLAAYADEPAL--GALHMELRDALRASFTSTLLGVL 218
>gi|226944966|ref|YP_002800039.1| TetR family transcriptional regulator [Azotobacter vinelandii
DJ]
gi|226719893|gb|ACO79064.1| Transcriptional regulator, TetR family [Azotobacter vinelandii
DJ]
Length=184
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/193 (36%), Positives = 98/193 (51%), Gaps = 18/193 (9%)
Query 44 VTLTAVAGRAGIHYSAVRRYFTSHKEVLLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAE 103
+T+ AV RAG+H + VRRY+ + +E+LL LA GW RW + LG + VAE
Sbjct 1 MTVAAVTERAGLHRTGVRRYYANKEELLLELAERGWGRWRDAIKSTLGTREGLEPVEVAE 60
Query 104 ALANGLAADPLFCDLLANLHLHLEQEVDVDRVIEVKRTSIA----AVIALVDAIESALPA 159
+A + + P+FCDLL ++ L LE +V+++R K + A V+ALV A
Sbjct 61 VVAETIISLPVFCDLLTHVTLSLEGDVEMERARRYKTNAFAIHDNIVVALVQASRMTTEQ 120
Query 160 LGRSGAFDILLAAYSLAATLWQIANPPERLTDAYAEEPELLPPEW---NLDFAAALTRLL 216
+ ++L LAA WQ+++P L Y E PEW LDF L LL
Sbjct 121 IQ-----NLLATTLMLAAGFWQVSHPTPTLARLYEE-----VPEWAHVALDFGPRLRYLL 170
Query 217 TATLLGLL-AGSP 228
A GL +GSP
Sbjct 171 RAMATGLAGSGSP 183
>gi|345014088|ref|YP_004816442.1| regulatory protein TetR [Streptomyces violaceusniger Tu 4113]
gi|344040437|gb|AEM86162.1| regulatory protein TetR [Streptomyces violaceusniger Tu 4113]
Length=221
Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/221 (34%), Positives = 110/221 (50%), Gaps = 9/221 (4%)
Query 10 LGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKE 69
+ FQRAR+EE + R A+++ A ++ E VA V+L ++ R G+ S V RYF S +
Sbjct 1 MTFQRARSEEQREIRRRAILDTAAAMLDEMPVAEVSLNELSRRVGLAKSNVLRYFESREA 60
Query 70 VLLHLAAEGWARWSGTVCEQL-----GEPGP-MSAPRVAEALANGLAADPLFCDLLANLH 123
VLL L W + ++L P + A ++AE L+ LA + CDL
Sbjct 61 VLLELLDVFLESWLVELADELAAGIEAHAAPEVRAGQLAEILSRSLAGRVVLCDLFGAQG 120
Query 124 LHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIA 183
LE V V+ V KR+S+ + A+ + + +P LG S L++ S A L
Sbjct 121 GVLEHNVSVEVVKRHKRSSLTRLAAMTELVRRHVPELGESAQLFCLMSLVS-AGALSAYI 179
Query 184 NPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLL 224
PP L AYA+EP L +++ AL T+TLLG+L
Sbjct 180 PPPPSLLAAYADEPAL--GVLHMELRDALRISFTSTLLGVL 218
>gi|344999239|ref|YP_004802093.1| TetR family transcriptional regulator [Streptomyces sp. SirexAA-E]
gi|344314865|gb|AEN09553.1| transcriptional regulator, TetR family [Streptomyces sp. SirexAA-E]
Length=221
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/221 (32%), Positives = 108/221 (49%), Gaps = 9/221 (4%)
Query 10 LGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKE 69
+ FQRAR+EE + R +++ A ++ E VA V+L ++ R G+ S V RYF S +
Sbjct 1 MTFQRARSEEQREIRRRTILDTAAAMLDEMPVAEVSLNELSRRVGLAKSNVLRYFESREA 60
Query 70 VLLHLAAEGWARWSGTVCEQL-----GEPGP-MSAPRVAEALANGLAADPLFCDLLANLH 123
VLL L + RW + ++L P + A ++A L+ LA + CDL
Sbjct 61 VLLELLDDFLGRWLADLADELAAGIEAHAAPEVRAGQLAVVLSRSLADRVVLCDLFGAQG 120
Query 124 LHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIA 183
LE V V+ V KR+S+ + A+ + + +P LG L++ S A L
Sbjct 121 GVLEHNVSVEVVKRHKRSSLTRLAAMTELVRRHVPELGDDAQLFCLMSLVS-AGALSSYV 179
Query 184 NPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLL 224
PP L AYA+EP L +++ AL T+ LLG+L
Sbjct 180 PPPPSLLAAYADEPAL--GALHMELPDALRAAFTSALLGVL 218
>gi|296131393|ref|YP_003638643.1| TetR family transcriptional regulator [Cellulomonas flavigena
DSM 20109]
gi|296023208|gb|ADG76444.1| transcriptional regulator, TetR family [Cellulomonas flavigena
DSM 20109]
Length=221
Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/222 (33%), Positives = 107/222 (49%), Gaps = 11/222 (4%)
Query 10 LGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKE 69
+ FQRAR+EE + R +++ A ++ E VA V+L ++ R G+ S V RYF S +
Sbjct 1 MTFQRARSEEQRELRRRTILDTAAAMLDEMPVADVSLNELSRRVGLAKSNVLRYFESREA 60
Query 70 VLLHLAAEGWARWSGTVCEQL-------GEPGPMSAPRVAEALANGLAADPLFCDLLANL 122
VLL L + W + +L PG A ++A+ L++ LA P+ CDL
Sbjct 61 VLLELLDDRLGTWLTDLDAELAGGVEAGASPG-TRATQLADVLSDSLATRPVLCDLFGAQ 119
Query 123 HLHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQI 182
LE V VD V+ KR S+A + L + + +P LG LL + A +
Sbjct 120 GGVLEHNVSVDVVVRHKRASLAHLETLEELLRRHVPELGDQAQRFGLLTLVTAGAVSSYV 179
Query 183 ANPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLL 224
PP L A+ ++P L +L+ AL LTA LLG L
Sbjct 180 PPPPSVLA-AFEQDPTL--AVLHLETREALRVALTAGLLGFL 218
>gi|229488992|ref|ZP_04382858.1| transcriptional regulator [Rhodococcus erythropolis SK121]
gi|229324496|gb|EEN90251.1| transcriptional regulator [Rhodococcus erythropolis SK121]
Length=229
Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/225 (31%), Positives = 100/225 (45%), Gaps = 7/225 (3%)
Query 5 LAVAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYF 64
+ VA GFQRAR E R A+++AAR++ VA ++L ++ G+ S V RYF
Sbjct 1 MMVATHGFQRARRPEQIEARRCAILDAARAMLGSRPVADISLRELSESVGLAKSNVLRYF 60
Query 65 TSHKEVLLHLAAEGWARWSGTVCEQL---GEPGPMSAP-RVAEALANGLAADPLFCDLLA 120
S + + L + E W W + E L G+ P + VA +A L A L C+L++
Sbjct 61 DSREAIFLEVLDENWVAWLDGLSESLTPTGDDSPFATEIHVASTVAESLVAQRLLCELMS 120
Query 121 NLHLHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLW 180
+ LE+ + VD + K+ + I S LP L A + A LW
Sbjct 121 VMAGVLERNISVDFARDFKKRATVNSGRFASLIHSQLPHLSEGDAAQFAKVTLVIVAGLW 180
Query 181 QIANPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLA 225
A P E + E PP ++ FA L L L+GL A
Sbjct 181 PTAEPAESMVVVLNEMQA--PPAADM-FATGLREGLINQLVGLSA 222
>gi|296138584|ref|YP_003645827.1| regulatory protein TetR [Tsukamurella paurometabola DSM 20162]
gi|296026718|gb|ADG77488.1| regulatory protein TetR [Tsukamurella paurometabola DSM 20162]
Length=223
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/222 (32%), Positives = 102/222 (46%), Gaps = 9/222 (4%)
Query 10 LGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKE 69
+ FQRAR+EE + QR +++ AA ++ E VA +TLT ++ R G+ S V RYF S ++
Sbjct 1 MSFQRARSEEQRLQRRESILAAADAMLAEMPVAEITLTGLSRRVGLAKSNVLRYFESRED 60
Query 70 VLLHLAAEGWARWSGTVCEQLGEPGPMSAP------RVAEALANGLAADPLFCDLLANLH 123
VLL L W + +AP R+A A A P DLL+
Sbjct 61 VLLELLVRSARDWVAELGAAAAAAIDPAAPVDDRVDRIAALFAGSAADHPGLLDLLSAQA 120
Query 124 LHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIA 183
LEQ V + V+ KR + + L + +A+P LG GA + A S+A L+ A
Sbjct 121 GVLEQNVSAEAVLRFKRAVLTVMTDLATVLRTAIPELG-DGALALCAMAVSIAGALYAQA 179
Query 184 NPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLA 225
E AY +P L + D ALT + G LA
Sbjct 180 RQSEACAAAYRADPAL--AVFRTDLVPALTGAFATLISGALA 219
>gi|152966740|ref|YP_001362524.1| TetR family transcriptional regulator [Kineococcus radiotolerans
SRS30216]
gi|151361257|gb|ABS04260.1| transcriptional regulator, TetR family [Kineococcus radiotolerans
SRS30216]
Length=221
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/219 (33%), Positives = 106/219 (49%), Gaps = 9/219 (4%)
Query 10 LGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKE 69
+ FQRAR++E + R A+++ A ++ E VA VTL ++ R G+ S V RYF S +
Sbjct 1 MTFQRARSDEQREIRRRAILDTAATMLDEMPVADVTLNELSRRVGLAKSNVLRYFDSREA 60
Query 70 VLLHLAAEGWARW----SGTVCEQLGEPGPM--SAPRVAEALANGLAADPLFCDLLANLH 123
VLL L W +G + L P+ A +++ LA LA + CDLL
Sbjct 61 VLLELMDRVLQDWLAELTGDLETGLDPALPLVPRAEQLSAVLARSLAGQRVLCDLLGAQG 120
Query 124 LHLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIA 183
LE+ V V+ V KRT++A + A D + +P LG + A A LA L +
Sbjct 121 AVLERNVPVEVVTRHKRTALARLTATADLLRRYVPELG-AAAETFCFHAMVLAGALAPYS 179
Query 184 NPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLG 222
+PP + AY +P L +LD +L + LLG
Sbjct 180 SPPPGVRAAYDADPAL--AALHLDLPGSLRSAIRTLLLG 216
>gi|331695420|ref|YP_004331659.1| regulatory protein TetR [Pseudonocardia dioxanivorans CB1190]
gi|326950109|gb|AEA23806.1| regulatory protein TetR [Pseudonocardia dioxanivorans CB1190]
Length=262
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/230 (34%), Positives = 103/230 (45%), Gaps = 12/230 (5%)
Query 10 LGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKE 69
+ FQRAR+ E + +R ++++ A + E VA VTL +A R G+ S V RYF S +
Sbjct 1 MTFQRARSPEQRAERRRSILDTASVMLAEMPVADVTLNELARRVGLAKSNVLRYFDSREA 60
Query 70 VLLHLAAEGWARWSGTVCEQL----GEPGPMS-APRVAEALANGLAADPLFCDLLANLHL 124
VLL L W + L GP A ++A AL L P+ CDLLA
Sbjct 61 VLLELLHAALQEWLDALRSDLPAAVDSTGPAERAEQLATALGASLRGRPVLCDLLAAQAS 120
Query 125 HLEQEVDVDRVIEVKRTSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIAN 184
LE V D KRTS+ + L D + LP LG AA A +W +
Sbjct 121 VLEHNVSPDVAARFKRTSLGDLGTLADVVAGVLPELGEDAVA-FAAAALMAAGAVWSHSC 179
Query 185 PPERLTDAYAEEPEL----LPPEWNLD--FAAALTRLLTATLLGLLAGSP 228
P + + AY +P L LP + L FA L LL GL AG P
Sbjct 180 PSQAMRAAYEADPSLAVLALPLDETLRTLFAVLLAGLLDRRARGLPAGVP 229
Lambda K H
0.319 0.132 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 319551017258
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40