BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0459
Length=163
Score E
Sequences producing significant alignments: (Bits) Value
gi|308231554|ref|ZP_07412893.2| hypothetical protein TMAG_01720 ... 328 2e-88
gi|15607600|ref|NP_214973.1| hypothetical protein Rv0459 [Mycoba... 327 3e-88
gi|340625485|ref|YP_004743937.1| hypothetical protein MCAN_04581... 326 6e-88
gi|339630528|ref|YP_004722170.1| hypothetical protein MAF_04620 ... 326 7e-88
gi|298523936|ref|ZP_07011345.1| conserved hypothetical protein [... 325 1e-87
gi|289756534|ref|ZP_06515912.1| conserved hypothetical protein [... 256 1e-66
gi|183980805|ref|YP_001849096.1| hypothetical protein MMAR_0781 ... 243 6e-63
gi|118617095|ref|YP_905427.1| hypothetical protein MUL_1417 [Myc... 241 2e-62
gi|254549406|ref|ZP_05139853.1| hypothetical protein Mtube_02923... 237 5e-61
gi|240169842|ref|ZP_04748501.1| hypothetical protein MkanA1_1104... 235 2e-60
gi|296168061|ref|ZP_06850127.1| UDP-glucose 4-epimerase [Mycobac... 220 4e-56
gi|120401806|ref|YP_951635.1| hypothetical protein Mvan_0791 [My... 215 1e-54
gi|118464641|ref|YP_883818.1| hypothetical protein MAV_4690 [Myc... 214 3e-54
gi|254819788|ref|ZP_05224789.1| hypothetical protein MintA_07684... 213 9e-54
gi|41410051|ref|NP_962887.1| hypothetical protein MAP3953 [Mycob... 211 2e-53
gi|342859038|ref|ZP_08715692.1| hypothetical protein MCOL_09178 ... 211 3e-53
gi|108797608|ref|YP_637805.1| hypothetical protein Mmcs_0628 [My... 206 1e-51
gi|333989085|ref|YP_004521699.1| hypothetical protein JDM601_044... 199 9e-50
gi|118468734|ref|YP_885304.1| hypothetical protein MSMEG_0901 [M... 199 1e-49
gi|145220727|ref|YP_001131405.1| hypothetical protein Mflv_0122 ... 194 4e-48
gi|333921889|ref|YP_004495470.1| hypothetical protein AS9A_4237 ... 183 7e-45
gi|312140946|ref|YP_004008282.1| hypothetical protein REQ_36140 ... 178 3e-43
gi|325675417|ref|ZP_08155101.1| protein of hypothetical function... 174 3e-42
gi|111025700|ref|YP_708120.1| hypothetical protein RHA1_ro08918 ... 171 4e-41
gi|111023045|ref|YP_706017.1| hypothetical protein RHA1_ro06082 ... 170 6e-41
gi|229490688|ref|ZP_04384526.1| conserved hypothetical protein [... 170 6e-41
gi|226365549|ref|YP_002783332.1| hypothetical protein ROP_61400 ... 169 1e-40
gi|226305300|ref|YP_002765258.1| hypothetical protein RER_18110 ... 168 2e-40
gi|403169|gb|AAC37134.1| putative ORF1 [Rhodococcus erythropolis] 167 5e-40
gi|326329229|ref|ZP_08195555.1| hypothetical protein NBCG_00663 ... 164 3e-39
gi|262200145|ref|YP_003271353.1| hypothetical protein Gbro_0110 ... 162 1e-38
gi|302530312|ref|ZP_07282654.1| conserved hypothetical protein [... 160 6e-38
gi|134099456|ref|YP_001105117.1| hypothetical protein SACE_2914 ... 160 8e-38
gi|310819436|ref|YP_003951794.1| hypothetical protein STAUR_2163... 159 9e-38
gi|149183757|ref|ZP_01862162.1| hypothetical protein BSG1_06706 ... 159 2e-37
gi|159897687|ref|YP_001543934.1| hypothetical protein Haur_1158 ... 158 3e-37
gi|326384983|ref|ZP_08206656.1| hypothetical protein SCNU_18647 ... 157 5e-37
gi|319948335|ref|ZP_08022481.1| hypothetical protein ES5_03211 [... 157 5e-37
gi|294147010|ref|YP_003559676.1| hypothetical protein SJA_C2-058... 157 5e-37
gi|343928329|ref|ZP_08767780.1| hypothetical protein GOALK_114_0... 155 1e-36
gi|169628070|ref|YP_001701719.1| hypothetical protein MAB_0973 [... 155 2e-36
gi|297192090|ref|ZP_06909488.1| conserved hypothetical protein [... 155 3e-36
gi|121610444|ref|YP_998251.1| hypothetical protein Veis_3513 [Ve... 154 3e-36
gi|294633977|ref|ZP_06712533.1| conserved hypothetical protein [... 154 5e-36
gi|334336385|ref|YP_004541537.1| protein of unknown function DUF... 154 5e-36
gi|317123465|ref|YP_004097577.1| hypothetical protein Intca_0295... 153 8e-36
gi|149921426|ref|ZP_01909879.1| hypothetical protein PPSIR1_2671... 153 9e-36
gi|21229580|ref|NP_635497.1| hypothetical protein XCC0102 [Xanth... 153 1e-35
gi|94497941|ref|ZP_01304506.1| hypothetical protein SKA58_00340 ... 151 3e-35
gi|325918796|ref|ZP_08180882.1| hypothetical protein XVE_4915 [X... 150 4e-35
>gi|308231554|ref|ZP_07412893.2| hypothetical protein TMAG_01720 [Mycobacterium tuberculosis SUMu001]
gi|308369397|ref|ZP_07417641.2| hypothetical protein TMBG_03693 [Mycobacterium tuberculosis SUMu002]
gi|308371674|ref|ZP_07425784.2| hypothetical protein TMDG_02937 [Mycobacterium tuberculosis SUMu004]
13 more sequence titles
Length=164
Score = 328 bits (841), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/163 (100%), Positives = 163/163 (100%), Gaps = 0/163 (0%)
Query 1 MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV 60
MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV
Sbjct 2 MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV 61
Query 61 LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA 120
LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA
Sbjct 62 LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA 121
Query 121 MREAAPVITGAAYECGERPLVRGLVVDLDDPDATPGVCRASRR 163
MREAAPVITGAAYECGERPLVRGLVVDLDDPDATPGVCRASRR
Sbjct 122 MREAAPVITGAAYECGERPLVRGLVVDLDDPDATPGVCRASRR 164
>gi|15607600|ref|NP_214973.1| hypothetical protein Rv0459 [Mycobacterium tuberculosis H37Rv]
gi|15839848|ref|NP_334885.1| hypothetical protein MT0475 [Mycobacterium tuberculosis CDC1551]
gi|31791638|ref|NP_854131.1| hypothetical protein Mb0468 [Mycobacterium bovis AF2122/97]
51 more sequence titles
Length=163
Score = 327 bits (839), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 163/163 (100%), Positives = 163/163 (100%), Gaps = 0/163 (0%)
Query 1 MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV 60
MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV
Sbjct 1 MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV 60
Query 61 LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA 120
LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA
Sbjct 61 LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA 120
Query 121 MREAAPVITGAAYECGERPLVRGLVVDLDDPDATPGVCRASRR 163
MREAAPVITGAAYECGERPLVRGLVVDLDDPDATPGVCRASRR
Sbjct 121 MREAAPVITGAAYECGERPLVRGLVVDLDDPDATPGVCRASRR 163
>gi|340625485|ref|YP_004743937.1| hypothetical protein MCAN_04581 [Mycobacterium canettii CIPT
140010059]
gi|340003675|emb|CCC42798.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=163
Score = 326 bits (836), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 162/163 (99%), Positives = 163/163 (100%), Gaps = 0/163 (0%)
Query 1 MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV 60
MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV
Sbjct 1 MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV 60
Query 61 LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA 120
LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA
Sbjct 61 LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA 120
Query 121 MREAAPVITGAAYECGERPLVRGLVVDLDDPDATPGVCRASRR 163
MREAAPVITGAAYECGERPLVRGLVVDLD+PDATPGVCRASRR
Sbjct 121 MREAAPVITGAAYECGERPLVRGLVVDLDEPDATPGVCRASRR 163
>gi|339630528|ref|YP_004722170.1| hypothetical protein MAF_04620 [Mycobacterium africanum GM041182]
gi|339329884|emb|CCC25534.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=163
Score = 326 bits (835), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 162/163 (99%), Positives = 163/163 (100%), Gaps = 0/163 (0%)
Query 1 MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV 60
MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV
Sbjct 1 MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV 60
Query 61 LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA 120
LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRG+VFSDAEKA
Sbjct 61 LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGQVFSDAEKA 120
Query 121 MREAAPVITGAAYECGERPLVRGLVVDLDDPDATPGVCRASRR 163
MREAAPVITGAAYECGERPLVRGLVVDLDDPDATPGVCRASRR
Sbjct 121 MREAAPVITGAAYECGERPLVRGLVVDLDDPDATPGVCRASRR 163
>gi|298523936|ref|ZP_07011345.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|298493730|gb|EFI29024.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=163
Score = 325 bits (834), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 162/163 (99%), Positives = 162/163 (99%), Gaps = 0/163 (0%)
Query 1 MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV 60
MNAPAGVLITAEAAALLAGLQDRHG VMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV
Sbjct 1 MNAPAGVLITAEAAALLAGLQDRHGSVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV 60
Query 61 LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA 120
LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA
Sbjct 61 LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA 120
Query 121 MREAAPVITGAAYECGERPLVRGLVVDLDDPDATPGVCRASRR 163
MREAAPVITGAAYECGERPLVRGLVVDLDDPDATPGVCRASRR
Sbjct 121 MREAAPVITGAAYECGERPLVRGLVVDLDDPDATPGVCRASRR 163
>gi|289756534|ref|ZP_06515912.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289712098|gb|EFD76110.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length=142
Score = 256 bits (653), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/126 (99%), Positives = 125/126 (99%), Gaps = 0/126 (0%)
Query 1 MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV 60
MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV
Sbjct 2 MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV 61
Query 61 LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA 120
LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA
Sbjct 62 LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA 121
Query 121 MREAAP 126
MREA P
Sbjct 122 MREAGP 127
>gi|183980805|ref|YP_001849096.1| hypothetical protein MMAR_0781 [Mycobacterium marinum M]
gi|183174131|gb|ACC39241.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=166
Score = 243 bits (620), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 124/165 (76%), Positives = 137/165 (84%), Gaps = 8/165 (4%)
Query 2 NAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVL 61
+AP+GV+ITA AA LLA LQDRHGPVMFHQSGGCCDGS+PMCYPR DFLVGDRD+LLG L
Sbjct 5 SAPSGVVITAGAAELLARLQDRHGPVMFHQSGGCCDGSSPMCYPRGDFLVGDRDVLLGTL 64
Query 62 DVGE----DGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDA 117
D+G+ +GV VWISGPQYQAWKHTQL+IDVVPGRGGGFSLEAPEG+RFLSRGRVF+
Sbjct 65 DIGKQTGAEGVAVWISGPQYQAWKHTQLVIDVVPGRGGGFSLEAPEGMRFLSRGRVFTGE 124
Query 118 EKAMREAAPVITGAAYECGERPLVRGLVVDLDDPDATPGVCRASR 162
E+A+ E PVITGAAYE GERP V G VV D PG C ASR
Sbjct 125 EQALLEETPVITGAAYERGERPAVPGEVVA----DNAPGACPASR 165
>gi|118617095|ref|YP_905427.1| hypothetical protein MUL_1417 [Mycobacterium ulcerans Agy99]
gi|118569205|gb|ABL03956.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=166
Score = 241 bits (616), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/165 (75%), Positives = 136/165 (83%), Gaps = 8/165 (4%)
Query 2 NAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVL 61
+AP+GV+ITA AA LLA LQDRHGPVMFHQSGGCCDGS+PMCYPR DFLVGDRD+LLG L
Sbjct 5 SAPSGVVITAGAAELLARLQDRHGPVMFHQSGGCCDGSSPMCYPRGDFLVGDRDVLLGTL 64
Query 62 DVGE----DGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDA 117
D+G+ +GV VWISGPQYQAWKHTQL+IDVVPGRGGGFSLEAPEG+RFLSRGRVF+
Sbjct 65 DIGKQTGAEGVAVWISGPQYQAWKHTQLVIDVVPGRGGGFSLEAPEGMRFLSRGRVFTGE 124
Query 118 EKAMREAAPVITGAAYECGERPLVRGLVVDLDDPDATPGVCRASR 162
E+A+ E PVITGA YE GERP V G VV D PG C ASR
Sbjct 125 EQALLEETPVITGAVYERGERPAVPGEVVA----DNAPGACPASR 165
>gi|254549406|ref|ZP_05139853.1| hypothetical protein Mtube_02923 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length=163
Score = 237 bits (604), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 115/116 (99%), Positives = 116/116 (100%), Gaps = 0/116 (0%)
Query 7 VLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDVGED 66
+LITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDVGED
Sbjct 1 MLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDVGED 60
Query 67 GVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKAMR 122
GVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKAMR
Sbjct 61 GVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKAMR 116
>gi|240169842|ref|ZP_04748501.1| hypothetical protein MkanA1_11042 [Mycobacterium kansasii ATCC
12478]
Length=162
Score = 235 bits (599), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/164 (74%), Positives = 134/164 (82%), Gaps = 7/164 (4%)
Query 1 MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV 60
M AP GV+ITA AA LLA L ++HGP+MFHQSGGCCDGS+PMCYP DFLVGDRD+LLGV
Sbjct 1 MVAPPGVVITASAAELLARLHEQHGPLMFHQSGGCCDGSSPMCYPHGDFLVGDRDVLLGV 60
Query 61 LDVGEDGVPVWISGPQYQAW---KHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDA 117
LDV E+GVPVWISGPQYQA +HTQL+IDVVPGRG GFSLEAPEGVRFLSRGRVF+D
Sbjct 61 LDVTEEGVPVWISGPQYQAQYREQHTQLVIDVVPGRGSGFSLEAPEGVRFLSRGRVFTDE 120
Query 118 EKAMREAAPVITGAAYECGERPLVRGLVVDLDDPDATPGVCRAS 161
EKA+ + PVITG AY GERP VRG VV D +PG CRA+
Sbjct 121 EKALVKGIPVITGLAYARGERPPVRGEVV----ADNSPGACRAT 160
>gi|296168061|ref|ZP_06850127.1| UDP-glucose 4-epimerase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896868|gb|EFG76496.1| UDP-glucose 4-epimerase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=155
Score = 220 bits (561), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/131 (83%), Positives = 116/131 (89%), Gaps = 1/131 (0%)
Query 16 LLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDVGEDGVPVWISGP 75
+LA LQDRHGPVMFHQSGGCCDGS+PMCYPR DF+VGDRD+LLGVLDVG DGVPVWISGP
Sbjct 14 MLARLQDRHGPVMFHQSGGCCDGSSPMCYPRGDFIVGDRDVLLGVLDVG-DGVPVWISGP 72
Query 76 QYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKAMREAAPVITGAAYEC 135
QY+ WKHTQL+IDVVPGRGGGFSLEAPEGVRFLSRGRVF+D E+A P ITGA YE
Sbjct 73 QYETWKHTQLVIDVVPGRGGGFSLEAPEGVRFLSRGRVFTDDEQAELRRTPAITGADYER 132
Query 136 GERPLVRGLVV 146
GERP VRG VV
Sbjct 133 GERPCVRGQVV 143
>gi|120401806|ref|YP_951635.1| hypothetical protein Mvan_0791 [Mycobacterium vanbaalenii PYR-1]
gi|119954624|gb|ABM11629.1| protein of unknown function DUF779 [Mycobacterium vanbaalenii
PYR-1]
Length=161
Score = 215 bits (548), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/146 (72%), Positives = 118/146 (81%), Gaps = 1/146 (0%)
Query 1 MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV 60
M+AP L+T AA LL LQDRHG +MFHQSGGCCDGS+PMCYP +FLVGDRD+LL V
Sbjct 1 MDAPNRALVTEAAAELLRSLQDRHGALMFHQSGGCCDGSSPMCYPDGEFLVGDRDVLLAV 60
Query 61 LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA 120
LDVG DGVPVWISGPQ+ AWKHTQL+IDVVPGRGGGFSLEAPEG RFLSRGR F++ E
Sbjct 61 LDVG-DGVPVWISGPQFDAWKHTQLVIDVVPGRGGGFSLEAPEGKRFLSRGRAFTEEENR 119
Query 121 MREAAPVITGAAYECGERPLVRGLVV 146
+A P +TGAAYE GERP+ G V
Sbjct 120 ALDAVPPVTGAAYERGERPVSNGTHV 145
>gi|118464641|ref|YP_883818.1| hypothetical protein MAV_4690 [Mycobacterium avium 104]
gi|254777127|ref|ZP_05218643.1| hypothetical protein MaviaA2_21009 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118165928|gb|ABK66825.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=160
Score = 214 bits (546), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/146 (79%), Positives = 125/146 (86%), Gaps = 3/146 (2%)
Query 4 PAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDV 63
P+GV+ITA AA +LA LQ +HGPVMFHQSGGCCDGS+PMCYP DFLVGDRD+LLGVLDV
Sbjct 6 PSGVVITAAAAEVLARLQRQHGPVMFHQSGGCCDGSSPMCYPVGDFLVGDRDVLLGVLDV 65
Query 64 GEDGVPVWISGPQYQAW---KHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA 120
G DGVPVWISGPQY A KHTQL+IDVVPGRGGGFSLEAP+GVRFLSRGRVFS AE+A
Sbjct 66 GADGVPVWISGPQYAAHYRDKHTQLVIDVVPGRGGGFSLEAPDGVRFLSRGRVFSAAEQA 125
Query 121 MREAAPVITGAAYECGERPLVRGLVV 146
AAP+ITGA Y+ GERP RG VV
Sbjct 126 AVAAAPIITGADYQHGERPAARGAVV 151
>gi|254819788|ref|ZP_05224789.1| hypothetical protein MintA_07684 [Mycobacterium intracellulare
ATCC 13950]
Length=155
Score = 213 bits (541), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 109/141 (78%), Positives = 116/141 (83%), Gaps = 3/141 (2%)
Query 9 ITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDVGEDGV 68
ITA AA +L LQ HGPVMFHQSGGCCDGS+PMCYP DFLVGDRD+LLGVLDVG DGV
Sbjct 3 ITAPAAEVLTRLQAAHGPVMFHQSGGCCDGSSPMCYPLGDFLVGDRDVLLGVLDVGPDGV 62
Query 69 PVWISGPQYQAW---KHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKAMREAA 125
PVWISGPQY A KHTQL+IDVVPGRGGGFSLEAP+GVRFLSRGRVF+ E+A A
Sbjct 63 PVWISGPQYAAHYRDKHTQLVIDVVPGRGGGFSLEAPDGVRFLSRGRVFTAEEQASLAGA 122
Query 126 PVITGAAYECGERPLVRGLVV 146
PVITGA YE GERP RG VV
Sbjct 123 PVITGAGYERGERPATRGPVV 143
>gi|41410051|ref|NP_962887.1| hypothetical protein MAP3953 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398884|gb|AAS06503.1| hypothetical protein MAP_3953 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336460305|gb|EGO39205.1| hypothetical protein MAPs_41010 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=160
Score = 211 bits (538), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/146 (78%), Positives = 124/146 (85%), Gaps = 3/146 (2%)
Query 4 PAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDV 63
P+GV+ITA AA +LA LQ +HGPVMFHQSGGCC GS+PMCYP DFLVGDRD+LLGVLDV
Sbjct 6 PSGVVITAAAAEVLARLQRQHGPVMFHQSGGCCAGSSPMCYPVGDFLVGDRDVLLGVLDV 65
Query 64 GEDGVPVWISGPQYQAW---KHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA 120
G DGVPVWISGPQY A KHTQL+IDVVPGRGGGFSLEAP+GVRFLSRGRVFS AE+A
Sbjct 66 GADGVPVWISGPQYAAHYRDKHTQLVIDVVPGRGGGFSLEAPDGVRFLSRGRVFSAAEQA 125
Query 121 MREAAPVITGAAYECGERPLVRGLVV 146
AAP+ITGA Y+ GERP RG VV
Sbjct 126 AVAAAPIITGADYQRGERPAARGAVV 151
>gi|342859038|ref|ZP_08715692.1| hypothetical protein MCOL_09178 [Mycobacterium colombiense CECT
3035]
gi|342133279|gb|EGT86482.1| hypothetical protein MCOL_09178 [Mycobacterium colombiense CECT
3035]
Length=155
Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/143 (75%), Positives = 116/143 (82%), Gaps = 3/143 (2%)
Query 7 VLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDVGED 66
++ITA AA +L LQ HGPVMFHQSGGCCDGS+PMCYP DFLVGDRD+LLGVLDVG D
Sbjct 1 MVITAPAAEVLTRLQATHGPVMFHQSGGCCDGSSPMCYPLGDFLVGDRDVLLGVLDVGTD 60
Query 67 GVPVWISGPQYQAW---KHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKAMRE 123
GVPVWISGPQY A KHTQL+IDVVPGRGGGFSLEAP+GVRFLSRGR F+D E+A
Sbjct 61 GVPVWISGPQYAAHYRDKHTQLVIDVVPGRGGGFSLEAPDGVRFLSRGRAFTDEERASLA 120
Query 124 AAPVITGAAYECGERPLVRGLVV 146
A ITGA YE GERP RG VV
Sbjct 121 TAAAITGADYERGERPAARGPVV 143
>gi|108797608|ref|YP_637805.1| hypothetical protein Mmcs_0628 [Mycobacterium sp. MCS]
gi|119866695|ref|YP_936647.1| hypothetical protein Mkms_0641 [Mycobacterium sp. KMS]
gi|126433232|ref|YP_001068923.1| hypothetical protein Mjls_0621 [Mycobacterium sp. JLS]
gi|108768027|gb|ABG06749.1| protein of unknown function DUF779 [Mycobacterium sp. MCS]
gi|119692784|gb|ABL89857.1| protein of unknown function DUF779 [Mycobacterium sp. KMS]
gi|126233032|gb|ABN96432.1| protein of unknown function DUF779 [Mycobacterium sp. JLS]
Length=164
Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/143 (71%), Positives = 111/143 (78%), Gaps = 0/143 (0%)
Query 4 PAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDV 63
P LIT AA LL LQ RHG +MFHQSGGCCDGS+PMCYP DF+VGDRD+LL VLDV
Sbjct 3 PPRALITQAAADLLTRLQGRHGALMFHQSGGCCDGSSPMCYPDGDFIVGDRDVLLAVLDV 62
Query 64 GEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKAMRE 123
G DGVPVWISGPQ+ WKHTQL+IDVVPGRGGGFSLEAPEG+RFLSR R F+DAE A
Sbjct 63 GADGVPVWISGPQFDTWKHTQLVIDVVPGRGGGFSLEAPEGMRFLSRARAFTDAENAELA 122
Query 124 AAPVITGAAYECGERPLVRGLVV 146
P +TGA Y G+RP R VV
Sbjct 123 QDPPVTGARYADGDRPAGRAPVV 145
>gi|333989085|ref|YP_004521699.1| hypothetical protein JDM601_0445 [Mycobacterium sp. JDM601]
gi|333485053|gb|AEF34445.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=134
Score = 199 bits (507), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 99/131 (76%), Positives = 105/131 (81%), Gaps = 0/131 (0%)
Query 1 MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV 60
M AP V IT AA LLA L RHGPVMFHQSGGCCDGSAPMCYP DF+VGD D+LLGV
Sbjct 1 MGAPERVRITEAAAELLARLVARHGPVMFHQSGGCCDGSAPMCYPDGDFIVGDHDVLLGV 60
Query 61 LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA 120
LDV GVPVWISGPQ+ AWKHTQLIIDVVPGRG GFSLEAPEG+RFLSR R F+D E A
Sbjct 61 LDVAGGGVPVWISGPQFGAWKHTQLIIDVVPGRGAGFSLEAPEGLRFLSRARAFTDHENA 120
Query 121 MREAAPVITGA 131
E PVITG+
Sbjct 121 ALEEVPVITGS 131
>gi|118468734|ref|YP_885304.1| hypothetical protein MSMEG_0901 [Mycobacterium smegmatis str.
MC2 155]
gi|118170021|gb|ABK70917.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=158
Score = 199 bits (505), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/155 (70%), Positives = 122/155 (79%), Gaps = 1/155 (0%)
Query 1 MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV 60
M+ P+ LITA AA LLA LQ HG +MFHQSGGCCDGS+PMCYP DF+VGDRD+LLGV
Sbjct 1 MSTPSRALITAAAADLLARLQKTHGALMFHQSGGCCDGSSPMCYPEGDFIVGDRDVLLGV 60
Query 61 LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA 120
LDVG DGVPVWISGPQ++AWKHTQL+IDVVPGRGGGFSLE+PEG+RFLSRGR F+DAE
Sbjct 61 LDVG-DGVPVWISGPQFEAWKHTQLVIDVVPGRGGGFSLESPEGMRFLSRGRAFTDAENE 119
Query 121 MREAAPVITGAAYECGERPLVRGLVVDLDDPDATP 155
A P ITGA Y G RP+ G V + DA P
Sbjct 120 ELAAQPPITGAQYAEGARPVQTGTSVVAEAEDACP 154
>gi|145220727|ref|YP_001131405.1| hypothetical protein Mflv_0122 [Mycobacterium gilvum PYR-GCK]
gi|315442321|ref|YP_004075200.1| hypothetical protein Mspyr1_06610 [Mycobacterium sp. Spyr1]
gi|145213213|gb|ABP42617.1| protein of unknown function DUF779 [Mycobacterium gilvum PYR-GCK]
gi|315260624|gb|ADT97365.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length=158
Score = 194 bits (493), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/137 (71%), Positives = 109/137 (80%), Gaps = 3/137 (2%)
Query 21 QDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDVGEDGVPVWISGPQYQAW 80
Q+RHGP+MFHQSGGCCDGS+PMCYP DF+VGDRD+LL VLDVG GVPVWISGPQ+ W
Sbjct 21 QERHGPLMFHQSGGCCDGSSPMCYPAGDFIVGDRDVLLAVLDVGT-GVPVWISGPQFDTW 79
Query 81 KHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKAMREAAPVITGAAYECGERPL 140
KHTQL+IDVVPGRGGGFSLE+PEG RFLSRGR F++ E + AP +TGAAYE GERP
Sbjct 80 KHTQLVIDVVPGRGGGFSLESPEGKRFLSRGRAFTEDENRALDDAPPVTGAAYERGERPS 139
Query 141 VRG--LVVDLDDPDATP 155
G LV D D A P
Sbjct 140 PTGSHLVADAVDACAIP 156
>gi|333921889|ref|YP_004495470.1| hypothetical protein AS9A_4237 [Amycolicicoccus subflavus DQS3-9A1]
gi|333484110|gb|AEF42670.1| hypothetical protein AS9A_4237 [Amycolicicoccus subflavus DQS3-9A1]
Length=160
Score = 183 bits (465), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 92/154 (60%), Positives = 112/154 (73%), Gaps = 3/154 (1%)
Query 7 VLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDVGED 66
V++T A LL L RHGP+M HQSGGCCDGSAPMCYP DF+VG+RD+LLGVL++G+
Sbjct 4 VVMTVAARDLLKQLAGRHGPLMLHQSGGCCDGSAPMCYPLGDFIVGERDVLLGVLELGDG 63
Query 67 GVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKAMREAAP 126
VPVWISG Q++ WKHTQL++DVVPGRG GFSLE+PEGVRFLSRGR F E + A
Sbjct 64 SVPVWISGSQFETWKHTQLVLDVVPGRGSGFSLESPEGVRFLSRGRAFEADELSALAAEQ 123
Query 127 VITGAAYECGERP---LVRGLVVDLDDPDATPGV 157
VI GA ++ G RP +VVD+ D PG+
Sbjct 124 VIDGAGWKTGVRPEPAEAGQVVVDVADACPAPGL 157
>gi|312140946|ref|YP_004008282.1| hypothetical protein REQ_36140 [Rhodococcus equi 103S]
gi|311890285|emb|CBH49603.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length=176
Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/150 (62%), Positives = 106/150 (71%), Gaps = 13/150 (8%)
Query 3 APAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLD 62
AP ++T AA+LL L D HGP+M HQSGGCCDGSAPMC+P +F VGDRD+LLGV D
Sbjct 4 APPRAVVTGAAASLLRHLADVHGPLMLHQSGGCCDGSAPMCFPMGEFTVGDRDVLLGVFD 63
Query 63 ----VGE---------DGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLS 109
VGE D VP+WISGPQ+ AWKHTQL++DVVPGRG GFSLEAPEGVR LS
Sbjct 64 LSLGVGELGTIAPQDDDAVPLWISGPQFDAWKHTQLVLDVVPGRGAGFSLEAPEGVRLLS 123
Query 110 RGRVFSDAEKAMREAAPVITGAAYECGERP 139
RGRVF AE A E + GA +E G RP
Sbjct 124 RGRVFDAAELAALEGEVPLLGADWERGARP 153
>gi|325675417|ref|ZP_08155101.1| protein of hypothetical function DUF779 [Rhodococcus equi ATCC
33707]
gi|325553388|gb|EGD23066.1| protein of hypothetical function DUF779 [Rhodococcus equi ATCC
33707]
Length=176
Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/150 (61%), Positives = 105/150 (70%), Gaps = 13/150 (8%)
Query 3 APAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLD 62
AP ++T AA+LL L D HGP+M HQSGGCCDGSAPMC+P +F VGDRD+LLGV D
Sbjct 4 APPRAVVTGAAASLLRHLADVHGPLMLHQSGGCCDGSAPMCFPMGEFTVGDRDVLLGVFD 63
Query 63 ----VGE---------DGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLS 109
VGE D VP+WISGPQ+ AWKHTQL++DVVPGRG GFSLEAPEGVR LS
Sbjct 64 LSLGVGELGTIAPQDDDAVPLWISGPQFDAWKHTQLVLDVVPGRGAGFSLEAPEGVRLLS 123
Query 110 RGRVFSDAEKAMREAAPVITGAAYECGERP 139
RGRVF AE A + + G +E G RP
Sbjct 124 RGRVFDAAELAALDGEVPLLGVDWERGVRP 153
>gi|111025700|ref|YP_708120.1| hypothetical protein RHA1_ro08918 [Rhodococcus jostii RHA1]
gi|110824679|gb|ABG99962.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=180
Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/151 (59%), Positives = 102/151 (68%), Gaps = 13/151 (8%)
Query 2 NAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVL 61
AP + TA A LL L HG +M HQSGGCCDGSAPMCYP +F+VGDRD+LLGVL
Sbjct 5 RAPQRLKATAGAVELLRRLGGTHGALMMHQSGGCCDGSAPMCYPDGEFIVGDRDVLLGVL 64
Query 62 DV-------------GEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFL 108
D+ G D VPVWISG Q++AWKHTQL++DVVPGRG GFSLE+PEG+RFL
Sbjct 65 DLRLGVGETPSTRPEGGDAVPVWISGSQFEAWKHTQLVLDVVPGRGSGFSLESPEGMRFL 124
Query 109 SRGRVFSDAEKAMREAAPVITGAAYECGERP 139
SR R F+ E A A VI G +E G RP
Sbjct 125 SRARAFTPEENASLAAEEVIVGQRWEQGWRP 155
>gi|111023045|ref|YP_706017.1| hypothetical protein RHA1_ro06082 [Rhodococcus jostii RHA1]
gi|110822575|gb|ABG97859.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=180
Score = 170 bits (431), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 88/151 (59%), Positives = 102/151 (68%), Gaps = 13/151 (8%)
Query 2 NAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVL 61
AP + TA A LL L HG +M HQSGGCCDGSAPMCYP +F+VGDRD+LLGVL
Sbjct 5 RAPQRLKATAGAVELLRRLGGTHGALMMHQSGGCCDGSAPMCYPDGEFIVGDRDVLLGVL 64
Query 62 DV-------------GEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFL 108
D+ G D VPVWISG Q++AWKHTQL++DVVPGRG GFSLE+PEG+RFL
Sbjct 65 DLRLGVGETPSTRPEGGDAVPVWISGSQFEAWKHTQLVLDVVPGRGSGFSLESPEGMRFL 124
Query 109 SRGRVFSDAEKAMREAAPVITGAAYECGERP 139
SR R F+ E A A VI G +E G RP
Sbjct 125 SRARAFTPEENASLAAEEVIVGQRWEQGWRP 155
>gi|229490688|ref|ZP_04384526.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229322508|gb|EEN88291.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=186
Score = 170 bits (431), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 103/150 (69%), Gaps = 13/150 (8%)
Query 4 PAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDV 63
P ++ TA AA LL L HG +M HQSGGCCDGSAPMCYP +F+VGDRD+LLG++D+
Sbjct 13 PPRLVTTAGAADLLRRLSGTHGELMMHQSGGCCDGSAPMCYPSGEFIVGDRDVLLGIVDL 72
Query 64 -------------GEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSR 110
G D V VWISG Q++AWKHTQL++DVVPGRG GFSLE+PEG RFLSR
Sbjct 73 RLAVGETPEDLPTGTDAVQVWISGSQFEAWKHTQLVLDVVPGRGSGFSLESPEGFRFLSR 132
Query 111 GRVFSDAEKAMREAAPVITGAAYECGERPL 140
R F+ E A+ ++ GA +E G RPL
Sbjct 133 ARAFTPDENEALGASSILVGADWEAGVRPL 162
>gi|226365549|ref|YP_002783332.1| hypothetical protein ROP_61400 [Rhodococcus opacus B4]
gi|226244039|dbj|BAH54387.1| hypothetical protein [Rhodococcus opacus B4]
Length=180
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/151 (58%), Positives = 101/151 (67%), Gaps = 13/151 (8%)
Query 2 NAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVL 61
AP + TA A LL L HG +M HQSGGCCDGSAPMCYP +F+VGDRD+LLGVL
Sbjct 5 RAPQRLKATAGAVELLRRLGGTHGALMMHQSGGCCDGSAPMCYPDGEFIVGDRDVLLGVL 64
Query 62 DV-------------GEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFL 108
D+ G D VPVWISG Q++AWKHTQL++DVVPGRG GFSLE+PEG+RFL
Sbjct 65 DLRLGVGETPSTRPEGADAVPVWISGSQFEAWKHTQLVLDVVPGRGSGFSLESPEGMRFL 124
Query 109 SRGRVFSDAEKAMREAAPVITGAAYECGERP 139
SR R F+ E A VI G +E G RP
Sbjct 125 SRARAFTPEENTSLAAEDVIVGERWEQGWRP 155
>gi|226305300|ref|YP_002765258.1| hypothetical protein RER_18110 [Rhodococcus erythropolis PR4]
gi|226184415|dbj|BAH32519.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=186
Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/149 (56%), Positives = 102/149 (69%), Gaps = 13/149 (8%)
Query 4 PAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDV 63
P ++ TA AA LL L HG +M HQSGGCCDGSAPMCYP +F+VGDRD+LLG++D+
Sbjct 13 PPRLVTTAGAADLLRRLSGTHGELMMHQSGGCCDGSAPMCYPSGEFIVGDRDVLLGIVDL 72
Query 64 -------------GEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSR 110
G D V VWISG Q++AWKHTQL++DVVPGRG GFSLE+PEG RFLSR
Sbjct 73 RLAVGEIPEDLPTGTDAVQVWISGSQFEAWKHTQLVLDVVPGRGSGFSLESPEGFRFLSR 132
Query 111 GRVFSDAEKAMREAAPVITGAAYECGERP 139
R F+ E A+ ++ GA +E G RP
Sbjct 133 ARAFTPDENEALGASSILVGADWEAGVRP 161
>gi|403169|gb|AAC37134.1| putative ORF1 [Rhodococcus erythropolis]
Length=186
Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 82/149 (56%), Positives = 101/149 (68%), Gaps = 13/149 (8%)
Query 4 PAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDV 63
P ++ TA AA LL L HG +M HQSGGCCDGSAPMCYP +F+VGDRD+LLG++D+
Sbjct 13 PPRLVTTAGAADLLRRLSGTHGELMMHQSGGCCDGSAPMCYPSGEFIVGDRDVLLGIVDL 72
Query 64 -------------GEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSR 110
G D V VWISG Q++AWKHTQL++DVVPGRG GFSLE+PEG RFLSR
Sbjct 73 RLAVGEIPEDLPTGTDAVQVWISGSQFEAWKHTQLVLDVVPGRGSGFSLESPEGFRFLSR 132
Query 111 GRVFSDAEKAMREAAPVITGAAYECGERP 139
R F+ E A+ ++ G +E G RP
Sbjct 133 ARAFTPDENEALGASSILVGTDWEAGVRP 161
>gi|326329229|ref|ZP_08195555.1| hypothetical protein NBCG_00663 [Nocardioidaceae bacterium Broad-1]
gi|325952964|gb|EGD44978.1| hypothetical protein NBCG_00663 [Nocardioidaceae bacterium Broad-1]
Length=130
Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/121 (67%), Positives = 93/121 (77%), Gaps = 1/121 (0%)
Query 2 NAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVL 61
+ PA V +T EAA LL L HGPVMFHQSGGCCDGSAPMCYP DF++GD DI LG L
Sbjct 8 SLPARVAVTDEAADLLRRLVGIHGPVMFHQSGGCCDGSAPMCYPSGDFMLGDADIHLGDL 67
Query 62 DVG-EDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA 120
D+G +D VPVW+S Q++ W HT L IDVVPGRG GFSLEAPEGVRFL R R+F+D E A
Sbjct 68 DIGLDDQVPVWMSRSQFEYWSHTHLTIDVVPGRGAGFSLEAPEGVRFLIRSRLFTDDEAA 127
Query 121 M 121
+
Sbjct 128 L 128
>gi|262200145|ref|YP_003271353.1| hypothetical protein Gbro_0110 [Gordonia bronchialis DSM 43247]
gi|262083492|gb|ACY19460.1| protein of unknown function DUF779 [Gordonia bronchialis DSM
43247]
Length=141
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/133 (61%), Positives = 96/133 (73%), Gaps = 2/133 (1%)
Query 2 NAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVL 61
N P V+ T A LL L + HG +M HQSGGCCDGSAPMCYP ++ VG RD+L+G +
Sbjct 6 NVPDRVVATDAAVQLLTKLSELHGGLMIHQSGGCCDGSAPMCYPVGEYRVGQRDVLVGEI 65
Query 62 DVGED--GVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEK 119
D+ E V VWI+G Q++ WKHTQLI+DVV GRG GFSLEAPEGVRFLSR R FSD E
Sbjct 66 DLPEPIPAVRVWINGDQFELWKHTQLILDVVQGRGAGFSLEAPEGVRFLSRARAFSDTEN 125
Query 120 AMREAAPVITGAA 132
A+ A P +TGAA
Sbjct 126 AVLAAYPPLTGAA 138
>gi|302530312|ref|ZP_07282654.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302439207|gb|EFL11023.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length=123
Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/115 (71%), Positives = 88/115 (77%), Gaps = 1/115 (0%)
Query 7 VLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDV-GE 65
V +T AA LL L HGPVMFHQSGGCCDGSAPMCYP +F VG RD+ LG L V G
Sbjct 5 VALTPAAADLLRRLVPVHGPVMFHQSGGCCDGSAPMCYPVGEFRVGSRDVHLGDLTVDGI 64
Query 66 DGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA 120
D VPVW+SGPQ++ WKHT L IDVVPGRG GFSLEAPEGVRFL R R+FSD E A
Sbjct 65 DAVPVWMSGPQFEYWKHTHLTIDVVPGRGSGFSLEAPEGVRFLIRSRLFSDEESA 119
>gi|134099456|ref|YP_001105117.1| hypothetical protein SACE_2914 [Saccharopolyspora erythraea NRRL
2338]
gi|291006155|ref|ZP_06564128.1| hypothetical protein SeryN2_16683 [Saccharopolyspora erythraea
NRRL 2338]
gi|133912079|emb|CAM02192.1| hypothetical protein SACE_2914 [Saccharopolyspora erythraea NRRL
2338]
Length=129
Score = 160 bits (404), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 75/118 (64%), Positives = 89/118 (76%), Gaps = 0/118 (0%)
Query 1 MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV 60
M+ P V +TAEAA + L+ RHGPVMFHQSGGCCDGSAPMCYP +FL GD D+ LG
Sbjct 1 MDLPGRVSVTAEAAEQIRRLRGRHGPVMFHQSGGCCDGSAPMCYPAGEFLTGDADVHLGD 60
Query 61 LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAE 118
LDV + VPVW+S Q++ WKHT L ID+V GRG GFSLEAP+GVRFL R R+ +D E
Sbjct 61 LDVDGESVPVWMSRSQFEYWKHTHLTIDLVAGRGSGFSLEAPDGVRFLIRSRLLTDEE 118
>gi|310819436|ref|YP_003951794.1| hypothetical protein STAUR_2163 [Stigmatella aurantiaca DW4/3-1]
gi|309392508|gb|ADO69967.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length=129
Score = 159 bits (403), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 75/128 (59%), Positives = 93/128 (73%), Gaps = 5/128 (3%)
Query 7 VLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDVGED 66
V +T A LL LQ++HGP+MFHQSGGCCDGSAPMC+PR DF +G D+ LG +
Sbjct 6 VTVTPAAEKLLRKLQEQHGPLMFHQSGGCCDGSAPMCFPRGDFKIGQEDVFLGTIV---- 61
Query 67 GVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAE-KAMREAA 125
P +ISGPQ++ WKHT L +DVVPGRG GFS+EAPEGVRFL R RVF DAE A+++A
Sbjct 62 DTPFYISGPQFEYWKHTHLTVDVVPGRGSGFSVEAPEGVRFLIRSRVFEDAEYHALQQAG 121
Query 126 PVITGAAY 133
P + G +
Sbjct 122 PPLRGLQH 129
>gi|149183757|ref|ZP_01862162.1| hypothetical protein BSG1_06706 [Bacillus sp. SG-1]
gi|148848531|gb|EDL62776.1| hypothetical protein BSG1_06706 [Bacillus sp. SG-1]
Length=118
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/114 (64%), Positives = 89/114 (79%), Gaps = 4/114 (3%)
Query 7 VLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDVGED 66
V+ T EA+ L++ L+D+HGP++FHQSGGCCDGS+PMCY D L+GD D+LLG + D
Sbjct 7 VIATEEASKLISRLKDKHGPLLFHQSGGCCDGSSPMCYQEGDMLIGDSDVLLGHI----D 62
Query 67 GVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA 120
G P +IS QY WKHTQLIIDVV GRGG FSLE PEG+RFL+R R+F+D EKA
Sbjct 63 GCPFYISKAQYDYWKHTQLIIDVVKGRGGMFSLEGPEGLRFLTRSRIFNDEEKA 116
>gi|159897687|ref|YP_001543934.1| hypothetical protein Haur_1158 [Herpetosiphon aurantiacus DSM
785]
gi|159890726|gb|ABX03806.1| protein of unknown function DUF779 [Herpetosiphon aurantiacus
DSM 785]
Length=130
Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/119 (63%), Positives = 90/119 (76%), Gaps = 4/119 (3%)
Query 7 VLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDVGED 66
VL T + AL+A L HGP++FHQSGGCCDGSAPMCYPR +F +G D+ LG +
Sbjct 6 VLATEQTEALVAKLSQLHGPLLFHQSGGCCDGSAPMCYPRQEFRIGQHDVYLGEIA---- 61
Query 67 GVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKAMREAA 125
G P +ISGPQ++ W+HTQL IDVV GRG GFS+EAPEGVRFL+R RVFSDAE + +AA
Sbjct 62 GCPFYISGPQFEYWQHTQLTIDVVKGRGSGFSVEAPEGVRFLTRSRVFSDAEYSELQAA 120
>gi|326384983|ref|ZP_08206656.1| hypothetical protein SCNU_18647 [Gordonia neofelifaecis NRRL
B-59395]
gi|326196274|gb|EGD53475.1| hypothetical protein SCNU_18647 [Gordonia neofelifaecis NRRL
B-59395]
Length=131
Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/121 (62%), Positives = 92/121 (77%), Gaps = 2/121 (1%)
Query 13 AAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDVGED--GVPV 70
A LL L + HG +M HQSGGCCDGSAPMCYP ++ +G RD+L+G +D+ E V +
Sbjct 7 AVELLTKLSELHGGLMIHQSGGCCDGSAPMCYPVGEYRIGQRDVLVGEIDLPEPLPTVRI 66
Query 71 WISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKAMREAAPVITG 130
WI+G Q++ WKHTQLI+DVVPGRG GFSLEAPEGVRFLSR RVF+D E A A+P +TG
Sbjct 67 WINGDQFELWKHTQLILDVVPGRGAGFSLEAPEGVRFLSRSRVFTDEENAELAASPPLTG 126
Query 131 A 131
A
Sbjct 127 A 127
>gi|319948335|ref|ZP_08022481.1| hypothetical protein ES5_03211 [Dietzia cinnamea P4]
gi|319438017|gb|EFV92991.1| hypothetical protein ES5_03211 [Dietzia cinnamea P4]
Length=173
Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/142 (58%), Positives = 93/142 (66%), Gaps = 12/142 (8%)
Query 2 NAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVL 61
+ P V+ T A LL L RHGPVMFHQSGGCCDGSAPMCYP +F VG RD+L+G L
Sbjct 28 DLPPRVVATEPAVELLRELVGRHGPVMFHQSGGCCDGSAPMCYPDGEFRVGQRDVLVGEL 87
Query 62 DVGEDG------------VPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLS 109
D+G+D V VWISG Q++ WKHTQL++D VPGRG GFSLE P G RFLS
Sbjct 88 DLGDDDEARAPGASVGLRVRVWISGSQFETWKHTQLVVDAVPGRGSGFSLENPTGKRFLS 147
Query 110 RGRVFSDAEKAMREAAPVITGA 131
R R F + E A E P TGA
Sbjct 148 RARTFDERELAALEEFPPPTGA 169
>gi|294147010|ref|YP_003559676.1| hypothetical protein SJA_C2-05810 [Sphingobium japonicum UT26S]
gi|292677427|dbj|BAI98944.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
Length=129
Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/125 (60%), Positives = 93/125 (75%), Gaps = 3/125 (2%)
Query 1 MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV 60
M+ P+ +L T EA AL+A L RHGP+MFHQSGGCCDGSAPMC+PR +F VG +D+LLG
Sbjct 1 MDLPSRILATPEAEALIARLTMRHGPLMFHQSGGCCDGSAPMCFPRGEFRVGGQDVLLGH 60
Query 61 LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA 120
+ VPVWI Q+ W+HTQ+ +DVVPGRG G SLE+PEG+RF+ R RVF+D E A
Sbjct 61 I---AGDVPVWIGAAQFDYWRHTQVTVDVVPGRGAGMSLESPEGMRFIVRSRVFTDEENA 117
Query 121 MREAA 125
EAA
Sbjct 118 ALEAA 122
>gi|343928329|ref|ZP_08767780.1| hypothetical protein GOALK_114_00060 [Gordonia alkanivorans NBRC
16433]
gi|343761737|dbj|GAA14706.1| hypothetical protein GOALK_114_00060 [Gordonia alkanivorans NBRC
16433]
Length=141
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/132 (58%), Positives = 95/132 (72%), Gaps = 2/132 (1%)
Query 3 APAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLD 62
AP V+ T A LL L + HG +M HQSGGCCDGSAPMCYP ++ VG RD+L+G ++
Sbjct 7 APDRVVATDAAVQLLTKLSELHGGLMIHQSGGCCDGSAPMCYPVGEYRVGQRDVLVGEIE 66
Query 63 VGED--GVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA 120
+ E V VWI+G Q++ WKHTQLI+DVV GRG GFSLEAPEGVRFLSR R F++ E
Sbjct 67 LPEPIPAVRVWINGDQFELWKHTQLILDVVKGRGAGFSLEAPEGVRFLSRARAFTEEENQ 126
Query 121 MREAAPVITGAA 132
+ A+P +TGA
Sbjct 127 LLAASPPLTGAT 138
>gi|169628070|ref|YP_001701719.1| hypothetical protein MAB_0973 [Mycobacterium abscessus ATCC 19977]
gi|169240037|emb|CAM61065.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=144
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/125 (63%), Positives = 89/125 (72%), Gaps = 3/125 (2%)
Query 7 VLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDVGED 66
V +T AA LLA L +HGPVMFHQSGGCCDGSAPMCYPR +F VG D+LLG +V D
Sbjct 21 VELTPAAAELLASLVAKHGPVMFHQSGGCCDGSAPMCYPRGEFRVGASDVLLG--EVSRD 78
Query 67 GVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKAMREAAP 126
P W+S Q++ W HT L +DVVPGRG GFSLEAPEGVRFL R R+F+D E P
Sbjct 79 -TPFWMSADQFEYWSHTHLTVDVVPGRGSGFSLEAPEGVRFLIRSRLFTDDEVLALANQP 137
Query 127 VITGA 131
V TGA
Sbjct 138 VRTGA 142
>gi|297192090|ref|ZP_06909488.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
gi|197723245|gb|EDY67153.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
Length=136
Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/120 (64%), Positives = 87/120 (73%), Gaps = 3/120 (2%)
Query 7 VLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDVGED 66
V +TA A L+ L +RHGPVMFHQSGGCCDGSAPMCYPR +F VG D+LLG +
Sbjct 8 VELTAAAEELVGRLAERHGPVMFHQSGGCCDGSAPMCYPRGEFRVGGSDVLLGEV---AG 64
Query 67 GVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKAMREAAP 126
G P W+S QY W+HT L +DVVPGRG GFSLEAPEGVRFL R R+ +DAE A EA P
Sbjct 65 GTPFWMSADQYAYWRHTHLTVDVVPGRGSGFSLEAPEGVRFLLRSRLLTDAELARIEAEP 124
>gi|121610444|ref|YP_998251.1| hypothetical protein Veis_3513 [Verminephrobacter eiseniae EF01-2]
gi|121555084|gb|ABM59233.1| protein of unknown function DUF779 [Verminephrobacter eiseniae
EF01-2]
Length=128
Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/119 (64%), Positives = 91/119 (77%), Gaps = 4/119 (3%)
Query 7 VLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDVGED 66
V T A AL+ L+ ++GP+MFHQSGGCCDGSAPMCYP+A+F+VGD D LLG +
Sbjct 8 VTATEAAIALIDQLRTKYGPLMFHQSGGCCDGSAPMCYPQAEFIVGDYDRLLGHIG---- 63
Query 67 GVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKAMREAA 125
GVP +ISGPQ++ W+HT LIIDVVPGRGG FSLE P G RFL+R R++SD E A EAA
Sbjct 64 GVPFYISGPQFEYWQHTHLIIDVVPGRGGMFSLEGPTGQRFLTRSRLYSDEEWATLEAA 122
>gi|294633977|ref|ZP_06712533.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292829973|gb|EFF88326.1| conserved hypothetical protein [Streptomyces sp. e14]
Length=134
Score = 154 bits (388), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/126 (62%), Positives = 93/126 (74%), Gaps = 4/126 (3%)
Query 7 VLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDVGED 66
V++T A L+ L +RHGP+MFHQSGGCCDGSAPMCYPR +F VG D+LLG +V D
Sbjct 8 VVLTEAAEDLVRRLTERHGPLMFHQSGGCCDGSAPMCYPRGEFRVGAADVLLG--EVAGD 65
Query 67 GVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAE-KAMREAA 125
P W+S QY W+HT L +DVVPGRGGGFSLEAPEGVRFL R RVF+D E + +R
Sbjct 66 -TPFWMSAGQYAYWRHTHLTVDVVPGRGGGFSLEAPEGVRFLLRSRVFTDEEWENVRTEP 124
Query 126 PVITGA 131
P+ TGA
Sbjct 125 PLPTGA 130
>gi|334336385|ref|YP_004541537.1| protein of unknown function DUF779 [Isoptericola variabilis 225]
gi|334106753|gb|AEG43643.1| protein of unknown function DUF779 [Isoptericola variabilis 225]
Length=132
Score = 154 bits (388), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/127 (61%), Positives = 90/127 (71%), Gaps = 9/127 (7%)
Query 1 MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV 60
M A V +T AA LLA L+ RHG +MFHQSGGCCDGS+PMCYP+ DFL + D+ LG
Sbjct 1 METAARVAVTDAAAGLLARLRRRHGELMFHQSGGCCDGSSPMCYPQGDFLTSEADVHLGD 60
Query 61 L-----DVGEDG----VPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRG 111
L DV EDG VPVW+S Q++ WKHT L IDVVPGRG GFS+EAPEGVRFL R
Sbjct 61 LVIPDEDVSEDGAAFRVPVWMSRQQFEYWKHTHLTIDVVPGRGAGFSVEAPEGVRFLIRS 120
Query 112 RVFSDAE 118
R+ +D E
Sbjct 121 RLLTDEE 127
>gi|317123465|ref|YP_004097577.1| hypothetical protein Intca_0295 [Intrasporangium calvum DSM 43043]
gi|315587553|gb|ADU46850.1| protein of unknown function DUF779 [Intrasporangium calvum DSM
43043]
Length=152
Score = 153 bits (387), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/114 (65%), Positives = 85/114 (75%), Gaps = 2/114 (1%)
Query 7 VLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDVG-- 64
V +T EAA LL L RHGP+MFHQSGGCCDGSAPMCYP +FL D D+LL L V
Sbjct 9 VELTREAADLLRRLTARHGPLMFHQSGGCCDGSAPMCYPANEFLTSDADVLLAALVVPDV 68
Query 65 EDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAE 118
+D VP W+S QY+ WKHT L +DVVPGRG GFS+EAPEGVRFL R R+ +DAE
Sbjct 69 QDAVPFWMSRVQYEYWKHTHLTVDVVPGRGSGFSVEAPEGVRFLIRSRLLTDAE 122
>gi|149921426|ref|ZP_01909879.1| hypothetical protein PPSIR1_26718 [Plesiocystis pacifica SIR-1]
gi|149817746|gb|EDM77211.1| hypothetical protein PPSIR1_26718 [Plesiocystis pacifica SIR-1]
Length=121
Score = 153 bits (386), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 73/122 (60%), Positives = 89/122 (73%), Gaps = 4/122 (3%)
Query 10 TAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDVGEDGVP 69
T EA A+L L HGP+MFHQSGGCCDGS+PMCYP +F +G RD+LLG + G P
Sbjct 4 TPEAVAMLEKLITMHGPLMFHQSGGCCDGSSPMCYPNGEFKIGQRDVLLGEVA----GCP 59
Query 70 VWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKAMREAAPVIT 129
+I G QY+ WKHTQL+IDVVPGRG GFS+EAPEGVRFL+R RVF + E+A+ P
Sbjct 60 FYIGGDQYERWKHTQLLIDVVPGRGSGFSVEAPEGVRFLTRSRVFDEDEQAVLACNPPAR 119
Query 130 GA 131
G+
Sbjct 120 GS 121
>gi|21229580|ref|NP_635497.1| hypothetical protein XCC0102 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66766454|ref|YP_241216.1| hypothetical protein XC_0105 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188989507|ref|YP_001901517.1| hypothetical protein xccb100_0111 [Xanthomonas campestris pv.
campestris str. B100]
gi|21111051|gb|AAM39421.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66571786|gb|AAY47196.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris
str. 8004]
gi|167731267|emb|CAP49441.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris]
gi|341934909|gb|AEL05048.1| conserved hypothetical protein [Xanthomonas campestris pv. raphani
756C]
Length=130
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/125 (61%), Positives = 92/125 (74%), Gaps = 4/125 (3%)
Query 1 MNAPAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGV 60
+ P V+ T A L+ L+ RHG V+FHQSGGCCDGS+PMC+P DF+VGDRD+LLG
Sbjct 7 VTLPLQVMATLPALQLIDTLRARHGDVLFHQSGGCCDGSSPMCFPVGDFIVGDRDVLLG- 65
Query 61 LDVGEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKA 120
++G G P +IS PQ++ WKHTQLIIDVVPGRGG FSLE EGVRFL R R+FSD E A
Sbjct 66 -EIG--GAPFYISAPQFEYWKHTQLIIDVVPGRGGMFSLENGEGVRFLVRSRLFSDDEFA 122
Query 121 MREAA 125
+ A
Sbjct 123 QLQLA 127
>gi|94497941|ref|ZP_01304506.1| hypothetical protein SKA58_00340 [Sphingomonas sp. SKA58]
gi|94422669|gb|EAT07705.1| hypothetical protein SKA58_00340 [Sphingomonas sp. SKA58]
Length=128
Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/122 (60%), Positives = 92/122 (76%), Gaps = 3/122 (2%)
Query 4 PAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDV 63
PA V+ T EA A++ L HG +MFHQSGGCCDGSAPMC+PR +F VG +D+LLG + V
Sbjct 3 PARVIATPEAEAMMRALTQTHGALMFHQSGGCCDGSAPMCFPRGEFKVGTQDVLLGHV-V 61
Query 64 GEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKAMRE 123
G+ +PVWI Q+ W+HTQ++IDVVPGRG G SLE+P+GVRF+ R RVF+D E A E
Sbjct 62 GD--IPVWIGSAQFDYWRHTQVMIDVVPGRGAGMSLESPQGVRFIVRSRVFTDEEYAALE 119
Query 124 AA 125
AA
Sbjct 120 AA 121
>gi|325918796|ref|ZP_08180882.1| hypothetical protein XVE_4915 [Xanthomonas vesicatoria ATCC 35937]
gi|325534996|gb|EGD06906.1| hypothetical protein XVE_4915 [Xanthomonas vesicatoria ATCC 35937]
Length=131
Score = 150 bits (380), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/122 (62%), Positives = 92/122 (76%), Gaps = 4/122 (3%)
Query 4 PAGVLITAEAAALLAGLQDRHGPVMFHQSGGCCDGSAPMCYPRADFLVGDRDILLGVLDV 63
P V+ T A L+A L+ RHG ++FHQSGGCCDGS+PMC+ DF+VGDRD+LLG ++
Sbjct 11 PLQVMATLAALQLIATLRARHGDLLFHQSGGCCDGSSPMCFAVGDFIVGDRDVLLG--EI 68
Query 64 GEDGVPVWISGPQYQAWKHTQLIIDVVPGRGGGFSLEAPEGVRFLSRGRVFSDAEKAMRE 123
G G P +IS PQ++ WKHTQLIIDVVPGRGG FSLE EGVRFL R R+FSD E + +
Sbjct 69 G--GAPFYISAPQFEYWKHTQLIIDVVPGRGGMFSLENGEGVRFLVRSRLFSDDEFSRLQ 126
Query 124 AA 125
AA
Sbjct 127 AA 128
Lambda K H
0.322 0.141 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129924364284
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40