BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0464c
Length=190
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607605|ref|NP_214978.1| hypothetical protein Rv0464c [Mycob... 389 1e-106
gi|340625490|ref|YP_004743942.1| hypothetical protein MCAN_04631... 386 9e-106
gi|341600395|emb|CCC63065.1| conserved hypothetical protein [Myc... 382 1e-104
gi|240169849|ref|ZP_04748508.1| hypothetical protein MkanA1_1107... 303 1e-80
gi|118619628|ref|YP_907960.1| hypothetical protein MUL_4533 [Myc... 302 2e-80
gi|183980813|ref|YP_001849104.1| hypothetical protein MMAR_0789 ... 302 2e-80
gi|15828334|ref|NP_302597.1| hypothetical protein ML2465 [Mycoba... 257 6e-67
gi|342859033|ref|ZP_08715687.1| 4-carboxymuconolactone decarboxy... 254 3e-66
gi|254819793|ref|ZP_05224794.1| hypothetical protein MintA_07709... 253 1e-65
gi|41410056|ref|NP_962892.1| hypothetical protein MAP3958c [Myco... 246 2e-63
gi|296168066|ref|ZP_06850132.1| 4-carboxymuconolactone decarboxy... 245 2e-63
gi|108797613|ref|YP_637810.1| carboxymuconolactone decarboxylase... 178 3e-43
gi|120401813|ref|YP_951642.1| carboxymuconolactone decarboxylase... 172 2e-41
gi|145220715|ref|YP_001131393.1| carboxymuconolactone decarboxyl... 171 5e-41
gi|169631197|ref|YP_001704846.1| hypothetical protein MAB_4119 [... 169 1e-40
gi|333989094|ref|YP_004521708.1| hypothetical protein JDM601_045... 167 9e-40
gi|226305036|ref|YP_002764994.1| hypothetical protein RER_15470 ... 159 2e-37
gi|229490188|ref|ZP_04384035.1| carboxymuconolactone decarboxyla... 158 4e-37
gi|262200758|ref|YP_003271966.1| alkylhydroperoxidase like prote... 157 7e-37
gi|343925737|ref|ZP_08765252.1| hypothetical protein GOALK_050_0... 155 2e-36
gi|118470195|ref|YP_885308.1| hypothetical protein MSMEG_0905 [M... 154 7e-36
gi|226361265|ref|YP_002779043.1| hypothetical protein ROP_18510 ... 147 1e-33
gi|111019126|ref|YP_702098.1| hypothetical protein RHA1_ro02133 ... 146 1e-33
gi|54027235|ref|YP_121477.1| hypothetical protein nfa52610 [Noca... 145 2e-33
gi|326383145|ref|ZP_08204834.1| alkylhydroperoxidase like protei... 145 4e-33
gi|325674001|ref|ZP_08153691.1| 4-carboxymuconolactone decarboxy... 135 2e-30
gi|312141177|ref|YP_004008513.1| 4-carboxymuconolactone decarbox... 135 3e-30
gi|336460427|gb|EGO39325.1| hypothetical protein MAPs_40910 [Myc... 134 8e-30
gi|269124589|ref|YP_003297959.1| carboxymuconolactone decarboxyl... 131 5e-29
gi|333918267|ref|YP_004491848.1| hypothetical protein AS9A_0594 ... 130 7e-29
gi|296141344|ref|YP_003648587.1| carboxymuconolactone decarboxyl... 129 1e-28
gi|119717063|ref|YP_924028.1| carboxymuconolactone decarboxylase... 129 3e-28
gi|319948674|ref|ZP_08022796.1| alkylhydroperoxidase like protei... 128 5e-28
gi|311742817|ref|ZP_07716625.1| 4-carboxymuconolactone decarboxy... 127 1e-27
gi|284044574|ref|YP_003394914.1| carboxymuconolactone decarboxyl... 118 4e-25
gi|336460300|gb|EGO39200.1| hypothetical protein MAPs_40960 [Myc... 112 3e-23
gi|296394644|ref|YP_003659528.1| carboxymuconolactone decarboxyl... 109 2e-22
gi|317506064|ref|ZP_07963892.1| carboxymuconolactone decarboxyla... 108 3e-22
gi|227549712|ref|ZP_03979761.1| carboxymuconolactone decarboxyla... 100 9e-20
gi|296392627|ref|YP_003657511.1| carboxymuconolactone decarboxyl... 98.2 5e-19
gi|260578935|ref|ZP_05846838.1| conserved hypothetical protein [... 89.4 2e-16
gi|340794653|ref|YP_004760116.1| hypothetical protein CVAR_1691 ... 88.2 5e-16
gi|68536235|ref|YP_250940.1| hypothetical protein jk1158 [Coryne... 86.7 2e-15
gi|336325801|ref|YP_004605767.1| hypothetical protein CRES_1248 ... 80.1 1e-13
gi|145223027|ref|YP_001133705.1| carboxymuconolactone decarboxyl... 79.3 3e-13
gi|120405166|ref|YP_954995.1| carboxymuconolactone decarboxylase... 77.0 1e-12
gi|271967553|ref|YP_003341749.1| carboxymuconolactone decarboxyl... 75.5 4e-12
gi|312198224|ref|YP_004018285.1| carboxymuconolactone decarboxyl... 73.6 1e-11
gi|288920237|ref|ZP_06414551.1| Carboxymuconolactone decarboxyla... 72.4 3e-11
gi|108800711|ref|YP_640908.1| carboxymuconolactone decarboxylase... 69.3 3e-10
>gi|15607605|ref|NP_214978.1| hypothetical protein Rv0464c [Mycobacterium tuberculosis H37Rv]
gi|15839853|ref|NP_334890.1| hypothetical protein MT0480 [Mycobacterium tuberculosis CDC1551]
gi|31791643|ref|NP_854136.1| hypothetical protein Mb0473c [Mycobacterium bovis AF2122/97]
77 more sequence titles
Length=190
Score = 389 bits (998), Expect = 1e-106, Method: Compositional matrix adjust.
Identities = 190/190 (100%), Positives = 190/190 (100%), Gaps = 0/190 (0%)
Query 1 MTGQNGQVARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTG 60
MTGQNGQVARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTG
Sbjct 1 MTGQNGQVARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTG 60
Query 61 RLLHGRLPGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDG 120
RLLHGRLPGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDG
Sbjct 61 RLLHGRLPGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDG 120
Query 121 PRKVLSARQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATIT 180
PRKVLSARQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATIT
Sbjct 121 PRKVLSARQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATIT 180
Query 181 ALAIPPDNPQ 190
ALAIPPDNPQ
Sbjct 181 ALAIPPDNPQ 190
>gi|340625490|ref|YP_004743942.1| hypothetical protein MCAN_04631 [Mycobacterium canettii CIPT
140010059]
gi|340003680|emb|CCC42803.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=190
Score = 386 bits (991), Expect = 9e-106, Method: Compositional matrix adjust.
Identities = 189/190 (99%), Positives = 189/190 (99%), Gaps = 0/190 (0%)
Query 1 MTGQNGQVARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTG 60
MTGQNGQVARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTG
Sbjct 1 MTGQNGQVARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTG 60
Query 61 RLLHGRLPGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDG 120
RLLHGRLPGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDG
Sbjct 61 RLLHGRLPGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDG 120
Query 121 PRKVLSARQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATIT 180
PRKVLSARQQALLQATDELIKDRTITAGTWERLATHLD RLLIEFCLLATQYDAIAATIT
Sbjct 121 PRKVLSARQQALLQATDELIKDRTITAGTWERLATHLDARLLIEFCLLATQYDAIAATIT 180
Query 181 ALAIPPDNPQ 190
ALAIPPDNPQ
Sbjct 181 ALAIPPDNPQ 190
>gi|341600395|emb|CCC63065.1| conserved hypothetical protein [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=190
Score = 382 bits (982), Expect = 1e-104, Method: Compositional matrix adjust.
Identities = 188/190 (99%), Positives = 188/190 (99%), Gaps = 0/190 (0%)
Query 1 MTGQNGQVARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTG 60
MTGQNGQVARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTG
Sbjct 1 MTGQNGQVARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTG 60
Query 61 RLLHGRLPGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDG 120
RLLHGRLPGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDG
Sbjct 61 RLLHGRLPGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDG 120
Query 121 PRKVLSARQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATIT 180
PRKVLSARQQALLQATDELIKDRTITAGTWER ATHLDPRLLI FCLLATQYDAIAATIT
Sbjct 121 PRKVLSARQQALLQATDELIKDRTITAGTWERPATHLDPRLLIGFCLLATQYDAIAATIT 180
Query 181 ALAIPPDNPQ 190
ALAIPPDNPQ
Sbjct 181 ALAIPPDNPQ 190
>gi|240169849|ref|ZP_04748508.1| hypothetical protein MkanA1_11077 [Mycobacterium kansasii ATCC
12478]
Length=188
Score = 303 bits (775), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/190 (80%), Positives = 164/190 (87%), Gaps = 2/190 (1%)
Query 1 MTGQNGQVARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTG 60
MTG QVARI G+ RQLGPVNW++AKL ARAV AP+MHLFTTLGYRQ LFW + IY G
Sbjct 1 MTGD--QVARIPSGRLRQLGPVNWVLAKLGARAVRAPEMHLFTTLGYRQSLFWAWLIYGG 58
Query 61 RLLHGRLPGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDG 120
RLL GRLP +DTELVILRVAHLRSCEYELQHHRRMAR GLDA TQATIFAWPDVP GDG
Sbjct 59 RLLRGRLPRIDTELVILRVAHLRSCEYELQHHRRMARAAGLDAQTQATIFAWPDVPGGDG 118
Query 121 PRKVLSARQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATIT 180
PRKVLSARQQALL+ATDELIKDR+IT TW++LATHL R LIEFC+LATQYD +AATIT
Sbjct 119 PRKVLSARQQALLKATDELIKDRSITTETWQQLATHLKQRQLIEFCMLATQYDGLAATIT 178
Query 181 ALAIPPDNPQ 190
AL IP DNP+
Sbjct 179 ALNIPLDNPR 188
>gi|118619628|ref|YP_907960.1| hypothetical protein MUL_4533 [Mycobacterium ulcerans Agy99]
gi|118571738|gb|ABL06489.1| conserved protein [Mycobacterium ulcerans Agy99]
Length=188
Score = 302 bits (773), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/190 (78%), Positives = 165/190 (87%), Gaps = 2/190 (1%)
Query 1 MTGQNGQVARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTG 60
MTG QVARI G RQLGPVNW +AKLAAR+V AP+MHLFT LGYRQYLFWT+AIY+G
Sbjct 1 MTGD--QVARIPSGGIRQLGPVNWALAKLAARSVRAPEMHLFTALGYRQYLFWTWAIYSG 58
Query 61 RLLHGRLPGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDG 120
RLLHGRLP +DTELVILRVAHLRSCEYELQHHRRMAR GLDA+ QATIFAWPD P GDG
Sbjct 59 RLLHGRLPRIDTELVILRVAHLRSCEYELQHHRRMARAAGLDAHAQATIFAWPDAPQGDG 118
Query 121 PRKVLSARQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATIT 180
PR+VLS+RQQALL ATDELIK+R++T TWE+L HL+ R LIEFCLLATQYDA+AATIT
Sbjct 119 PRRVLSSRQQALLTATDELIKNRSVTPATWEQLEIHLNRRRLIEFCLLATQYDALAATIT 178
Query 181 ALAIPPDNPQ 190
AL +P DNP+
Sbjct 179 ALGVPLDNPR 188
>gi|183980813|ref|YP_001849104.1| hypothetical protein MMAR_0789 [Mycobacterium marinum M]
gi|183174139|gb|ACC39249.1| conserved protein [Mycobacterium marinum M]
Length=188
Score = 302 bits (773), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/190 (78%), Positives = 164/190 (87%), Gaps = 2/190 (1%)
Query 1 MTGQNGQVARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTG 60
MTG QVARI G RQLGPVNW +AKLAAR+V AP+MHLFT LGYRQYLFWT+AIY+G
Sbjct 1 MTGD--QVARIPSGGIRQLGPVNWALAKLAARSVRAPEMHLFTALGYRQYLFWTWAIYSG 58
Query 61 RLLHGRLPGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDG 120
RLLHGRLP +DTELVILRVAHLRSCEYELQHHRRMAR GLDA QATIFAWPD P GDG
Sbjct 59 RLLHGRLPRIDTELVILRVAHLRSCEYELQHHRRMARAAGLDAQAQATIFAWPDAPQGDG 118
Query 121 PRKVLSARQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATIT 180
PR+VLS+RQQALL ATDELIK+R++T TWE+L HL+ R LIEFCLLATQYDA+AATIT
Sbjct 119 PRRVLSSRQQALLTATDELIKNRSVTPATWEQLEIHLNRRRLIEFCLLATQYDALAATIT 178
Query 181 ALAIPPDNPQ 190
AL +P DNP+
Sbjct 179 ALGVPLDNPR 188
>gi|15828334|ref|NP_302597.1| hypothetical protein ML2465 [Mycobacterium leprae TN]
gi|221230811|ref|YP_002504227.1| hypothetical protein MLBr_02465 [Mycobacterium leprae Br4923]
gi|13094027|emb|CAC31982.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933918|emb|CAR72564.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=188
Score = 257 bits (657), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 124/184 (68%), Positives = 143/184 (78%), Gaps = 4/184 (2%)
Query 5 NGQVARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLLH 64
G V RI PG RQLGP+NW++AKLAA + +MHLFT LG RQ LFW + IY GRLL
Sbjct 7 TGPVGRIPPGSLRQLGPINWVIAKLAASLLRTSEMHLFTILGQRQLLFWAWLIYGGRLLR 66
Query 65 GRLPGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKV 124
G+LP VDTELVILRVAHLR+CEYELQHHRRMAR+RGLD QA IFAWPDVP G G
Sbjct 67 GKLPRVDTELVILRVAHLRTCEYELQHHRRMARKRGLDTKIQAMIFAWPDVPTGAG---- 122
Query 125 LSARQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAI 184
LS RQQALL ATDE +KDR IT+ +W++L THLD R LIEFC+L +QYD +AATI++L I
Sbjct 123 LSVRQQALLAATDEFVKDRKITSSSWQQLETHLDRRRLIEFCMLISQYDGLAATISSLDI 182
Query 185 PPDN 188
P DN
Sbjct 183 PLDN 186
>gi|342859033|ref|ZP_08715687.1| 4-carboxymuconolactone decarboxylase [Mycobacterium colombiense
CECT 3035]
gi|342133274|gb|EGT86477.1| 4-carboxymuconolactone decarboxylase [Mycobacterium colombiense
CECT 3035]
Length=185
Score = 254 bits (650), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/181 (70%), Positives = 148/181 (82%), Gaps = 2/181 (1%)
Query 10 RISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLLHGRLPG 69
RI PG+FR+LGP+NW++AKL AR V AP+MHLFTTLG R+ LFWT+ Y GRLL G+LP
Sbjct 7 RIPPGRFRELGPINWVIAKLGARTVAAPEMHLFTTLGQRRLLFWTWLAYGGRLLRGKLPT 66
Query 70 VDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSARQ 129
VDTELVILRVAHLR+CEYELQHHRRMAR+ GLDA+ QA IFAWP+ D R L+ RQ
Sbjct 67 VDTELVILRVAHLRACEYELQHHRRMARKAGLDADLQAAIFAWPEKLDPVDAR--LTVRQ 124
Query 130 QALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPDNP 189
QALL ATDE +KDRT+TA TW +LA HLD R LIEFCLLA+QYD +AAT++AL IP D+P
Sbjct 125 QALLAATDEFVKDRTVTADTWRQLAAHLDRRQLIEFCLLASQYDGLAATMSALDIPLDHP 184
Query 190 Q 190
+
Sbjct 185 R 185
>gi|254819793|ref|ZP_05224794.1| hypothetical protein MintA_07709 [Mycobacterium intracellulare
ATCC 13950]
Length=186
Score = 253 bits (646), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/182 (69%), Positives = 142/182 (79%), Gaps = 2/182 (1%)
Query 9 ARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLLHGRLP 68
RI PG+FRQLGP+NW++AKL AR V AP+MHLFT LG RQ LFWT+ Y GRLL G+LP
Sbjct 5 GRIPPGRFRQLGPINWVIAKLGARTVRAPEMHLFTILGQRQLLFWTWLAYGGRLLRGKLP 64
Query 69 GVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSAR 128
+DTELVILRV HLR+CEYELQHHRRMAR+ GLDA+ QA IFAWP+ D R L+ R
Sbjct 65 TIDTELVILRVGHLRACEYELQHHRRMARKAGLDADAQAAIFAWPERLDPVEGR--LTVR 122
Query 129 QQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPDN 188
QQALL ATDE + DRT+T TW LATHLD R LIEFCLLA+QYD +AAT+ L IP DN
Sbjct 123 QQALLAATDEFVNDRTVTDATWRELATHLDRRQLIEFCLLASQYDGLAATMATLEIPLDN 182
Query 189 PQ 190
PQ
Sbjct 183 PQ 184
>gi|41410056|ref|NP_962892.1| hypothetical protein MAP3958c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118465013|ref|YP_883813.1| hypothetical protein MAV_4685 [Mycobacterium avium 104]
gi|254777122|ref|ZP_05218638.1| hypothetical protein MaviaA2_20984 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41398889|gb|AAS06508.1| hypothetical protein MAP_3958c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118166300|gb|ABK67197.1| 4-carboxymuconolactone decarboxylase domain protein [Mycobacterium
avium 104]
Length=185
Score = 246 bits (627), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/181 (67%), Positives = 142/181 (79%), Gaps = 2/181 (1%)
Query 10 RISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLLHGRLPG 69
RI G+FRQLGP+NW++AKL AR VGAP+MHLFTTLG R+ LFWT+ Y GRLL G+LP
Sbjct 5 RIPAGRFRQLGPINWVIAKLGARTVGAPEMHLFTTLGQRRLLFWTWLAYGGRLLRGKLPT 64
Query 70 VDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSARQ 129
DTELVILRVAHLR CEYELQHHRRMAR GLD + QA IFAWP + R L+ RQ
Sbjct 65 ADTELVILRVAHLRGCEYELQHHRRMARTAGLDPDLQAAIFAWPQRLEPVQAR--LTVRQ 122
Query 130 QALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPDNP 189
QALL ATDE + DRT++ TW +LA HLD R LIEFCLLA+QYD +AAT++ALAIP D+P
Sbjct 123 QALLAATDEFVNDRTVSEATWRQLAEHLDRRQLIEFCLLASQYDGLAATMSALAIPLDHP 182
Query 190 Q 190
+
Sbjct 183 E 183
>gi|296168066|ref|ZP_06850132.1| 4-carboxymuconolactone decarboxylase domain protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295896873|gb|EFG76501.1| 4-carboxymuconolactone decarboxylase domain protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length=186
Score = 245 bits (626), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/190 (65%), Positives = 148/190 (78%), Gaps = 4/190 (2%)
Query 1 MTGQNGQVARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTG 60
M+G G RI G+FR+LGP+NW++AK AAR V AP+MHLFTTLG + LF +++Y+G
Sbjct 1 MSGAAG--GRIPSGRFRELGPINWVLAKAAARTVRAPEMHLFTTLGQHRLLFLAWSVYSG 58
Query 61 RLLHGRLPGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDG 120
R+L GRLP +DTELVILRVAHLR CEYELQHHRRMA R+GL+A+ QA IFAWP+ D
Sbjct 59 RVLRGRLPAIDTELVILRVAHLRGCEYELQHHRRMAARQGLNADLQAAIFAWPERQDRVE 118
Query 121 PRKVLSARQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATIT 180
R L+ RQQALL ATDE +KDRT+T TW+ LA HLD R LIEFCLLA+QYD +AAT+
Sbjct 119 AR--LTVRQQALLAATDEFVKDRTLTDATWQALAEHLDRRQLIEFCLLASQYDGLAATMA 176
Query 181 ALAIPPDNPQ 190
AL IP DNP+
Sbjct 177 ALDIPLDNPR 186
>gi|108797613|ref|YP_637810.1| carboxymuconolactone decarboxylase [Mycobacterium sp. MCS]
gi|119866700|ref|YP_936652.1| carboxymuconolactone decarboxylase [Mycobacterium sp. KMS]
gi|126433237|ref|YP_001068928.1| carboxymuconolactone decarboxylase [Mycobacterium sp. JLS]
gi|108768032|gb|ABG06754.1| Carboxymuconolactone decarboxylase [Mycobacterium sp. MCS]
gi|119692789|gb|ABL89862.1| Carboxymuconolactone decarboxylase [Mycobacterium sp. KMS]
gi|126233037|gb|ABN96437.1| Carboxymuconolactone decarboxylase [Mycobacterium sp. JLS]
Length=178
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/184 (53%), Positives = 120/184 (66%), Gaps = 9/184 (4%)
Query 8 VARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLLH--G 65
+ RI+PG FR+LGP+NW +AK ARA+ AP+ LF LG + LF F Y+G LL G
Sbjct 1 MTRIAPGGFRELGPLNWAIAKAGARAIRAPRFSLFNVLGQHRLLFLAFLPYSGVLLGRLG 60
Query 66 RLPGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVL 125
+L D ELVILRV HLR CEYELQ HRR+AR RG+ A+ QA IF + PD +G L
Sbjct 61 KLSRQDAELVILRVGHLRECEYELQQHRRLARSRGVGADLQARIF---EGPDAEG----L 113
Query 126 SARQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIP 185
+ RQ+ L+ ATDE + R ++ TW LA HL LIEFCLLA YD +AATI+ L +P
Sbjct 114 TDRQRVLVTATDEFVVTRGVSPQTWSVLARHLTKPQLIEFCLLAAHYDGLAATISTLQVP 173
Query 186 PDNP 189
D P
Sbjct 174 LDFP 177
>gi|120401813|ref|YP_951642.1| carboxymuconolactone decarboxylase [Mycobacterium vanbaalenii
PYR-1]
gi|119954631|gb|ABM11636.1| Carboxymuconolactone decarboxylase [Mycobacterium vanbaalenii
PYR-1]
Length=180
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 120/182 (66%), Gaps = 8/182 (4%)
Query 9 ARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLLH-GRL 67
ARI+PG F++LGP+NW +AK+ AR + P+ L LG + LF T+ + LL+ G+L
Sbjct 5 ARIAPGGFKELGPLNWAIAKIGARGIRRPRFSLMNVLGQHRLLFLTWLPLSAHLLYVGKL 64
Query 68 PGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSA 127
D E+VILRVAHLR YELQ HRR+AR RG+DA+TQA IFA PD + L+
Sbjct 65 SRHDAEVVILRVAHLRDSTYELQQHRRLARSRGVDADTQARIFAGPD-------SEGLTD 117
Query 128 RQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPD 187
R++ L+ ATDE + R ++ TW+ L+ HL LIEFCLLA QYD +AATIT L +P D
Sbjct 118 RERVLITATDEFVVTRGVSPETWQALSAHLTKPQLIEFCLLAAQYDGLAATITTLQVPLD 177
Query 188 NP 189
P
Sbjct 178 FP 179
>gi|145220715|ref|YP_001131393.1| carboxymuconolactone decarboxylase [Mycobacterium gilvum PYR-GCK]
gi|315442333|ref|YP_004075212.1| hypothetical protein Mspyr1_06730 [Mycobacterium sp. Spyr1]
gi|145213201|gb|ABP42605.1| Carboxymuconolactone decarboxylase [Mycobacterium gilvum PYR-GCK]
gi|315260636|gb|ADT97377.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length=179
Score = 171 bits (433), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 116/182 (64%), Gaps = 8/182 (4%)
Query 9 ARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLLH-GRL 67
ARI PG F++LGP+NW++AK AR + P+ L LG + LF + +G LL+ G+L
Sbjct 4 ARIPPGGFKELGPLNWVIAKAGARGIRRPRFSLMNVLGQHRLLFLAWLPLSGFLLYAGKL 63
Query 68 PGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSA 127
D E+VILRV HLR EYELQ HRR+AR RGLD TQA IFA PD + L+
Sbjct 64 SRRDAEVVILRVGHLRGSEYELQQHRRLARSRGLDKETQARIFAGPDA-------EGLTD 116
Query 128 RQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPD 187
R++ L+ ATDE + R I+ TW+ LA H LIEFCLLA QYD +AATI+ L +P D
Sbjct 117 RERVLITATDEFVVTRGISPETWQMLAAHFTKPQLIEFCLLAAQYDGLAATISTLQVPLD 176
Query 188 NP 189
P
Sbjct 177 FP 178
>gi|169631197|ref|YP_001704846.1| hypothetical protein MAB_4119 [Mycobacterium abscessus ATCC 19977]
gi|169243164|emb|CAM64192.1| Conserved hypothetical protein (carboxymuconolactone decarboxylase?)
[Mycobacterium abscessus]
Length=177
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/181 (50%), Positives = 118/181 (66%), Gaps = 8/181 (4%)
Query 9 ARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLLHG-RL 67
RI G R+LGP+NW++AK ARAV AP+MHL TTLG FW + Y+G +L G +L
Sbjct 4 GRIPSGGLRELGPINWVIAKGMARAVNAPEMHLATTLGQTGARFWPWLAYSGAILRGTKL 63
Query 68 PGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSA 127
DTE+VILRVAH+R CEYELQHH R+A+ G+D Q IF G G LS
Sbjct 64 STRDTEVVILRVAHVRECEYELQHHTRIAKSAGIDPAYQERIFT------GAGAEG-LSD 116
Query 128 RQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPD 187
+++AL+ DE++ RT++ WE L+ LD R LI FCLL TQYD +AAT+++L IP D
Sbjct 117 KERALITGVDEILTTRTLSDEAWEGLSKFLDRRQLIGFCLLVTQYDGLAATMSSLRIPLD 176
Query 188 N 188
+
Sbjct 177 H 177
>gi|333989094|ref|YP_004521708.1| hypothetical protein JDM601_0454 [Mycobacterium sp. JDM601]
gi|333485062|gb|AEF34454.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=182
Score = 167 bits (422), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 92/177 (52%), Positives = 116/177 (66%), Gaps = 6/177 (3%)
Query 12 SPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLLHG-RLPGV 70
+PG R LG NWLV K+ AR P+ HLFTTLG + L W++ + G L+ G +L
Sbjct 8 APG-LRDLGLANWLVCKVIARRQQVPRAHLFTTLGQHRRLMWSWLPFGGMLMRGGKLSTR 66
Query 71 DTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSARQQ 130
DTE VILRV HLR +YELQHHRRM R GLD +TQA IF P P D L+ARQ+
Sbjct 67 DTEFVILRVGHLRDSQYELQHHRRMGRAAGLDDDTQARIFEGPGGPRFD----ELTARQR 122
Query 131 ALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPD 187
A+L A DEL+ RT++ TW L+ HLD LIEF +L +QYDA+AAT++AL +P D
Sbjct 123 AMLTAIDELVGTRTLSDATWAELSKHLDRPRLIEFVMLTSQYDALAATLSALRVPLD 179
>gi|226305036|ref|YP_002764994.1| hypothetical protein RER_15470 [Rhodococcus erythropolis PR4]
gi|226184151|dbj|BAH32255.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=177
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/179 (47%), Positives = 111/179 (63%), Gaps = 8/179 (4%)
Query 10 RISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLL-HGRLP 68
RI PG+F+ LGP+NW + ++ ++A GAP HLF+TLG LF + Y+G L+ G++
Sbjct 4 RIPPGRFKDLGPINWGIWRVLSKAAGAPDAHLFSTLGRTGGLFRGWLHYSGSLMPGGKIS 63
Query 69 GVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSAR 128
DTEL+ILRVAHLR C YE+ HH R+ R+ G+DA A I P + LS R
Sbjct 64 RHDTELIILRVAHLRDCGYEMDHHIRLGRKAGIDAEELARIIEGPGASE-------LSPR 116
Query 129 QQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPD 187
+A+L A DEL+ + IT TW L+ HLD R LIEF LL TQYD +A TI L + D
Sbjct 117 HRAILTAVDELVTTKDITDNTWGTLSQHLDDRRLIEFTLLVTQYDGLATTIGTLRVQRD 175
>gi|229490188|ref|ZP_04384035.1| carboxymuconolactone decarboxylase [Rhodococcus erythropolis
SK121]
gi|229322936|gb|EEN88710.1| carboxymuconolactone decarboxylase [Rhodococcus erythropolis
SK121]
Length=177
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/179 (47%), Positives = 111/179 (63%), Gaps = 8/179 (4%)
Query 10 RISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLL-HGRLP 68
RI PG+F+ LGP+NW + ++ ++A GAP HLF+TLG LF + Y+G L+ G++
Sbjct 4 RIPPGRFKDLGPINWGIWRVLSKAAGAPDAHLFSTLGRTGGLFRGWLHYSGSLMPGGKIS 63
Query 69 GVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSAR 128
DTEL+ILRVAHLR C YE+ HH R+ R+ G+DA A I P + LS R
Sbjct 64 RHDTELIILRVAHLRDCGYEMDHHIRLGRKAGIDAEELARIIEGPGASE-------LSPR 116
Query 129 QQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPD 187
+A+L A DEL+ + +T TW L+ HLD R LIEF LL TQYD +A TI L + D
Sbjct 117 HRAILTAVDELVTTKDVTDDTWGTLSQHLDDRRLIEFTLLVTQYDGLATTIGTLRVQRD 175
>gi|262200758|ref|YP_003271966.1| alkylhydroperoxidase like protein [Gordonia bronchialis DSM 43247]
gi|262084105|gb|ACY20073.1| alkylhydroperoxidase like protein, AhpD family [Gordonia bronchialis
DSM 43247]
Length=178
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/180 (47%), Positives = 113/180 (63%), Gaps = 9/180 (5%)
Query 10 RISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLL-HGRLP 68
RI+PG+FR LGP+NW+ A+ AAR +G +F+TLG + +F + Y+GRL+ G L
Sbjct 5 RITPGRFRDLGPLNWVFARGAARVIGVDDARIFSTLGRTRGVFRAWLHYSGRLMPFGALS 64
Query 69 GVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSAR 128
D+E++I+RVAH RSC+YEL HHRR+ +R G+D + A I PD GD R
Sbjct 65 RKDSEMIIIRVAHRRSCDYELDHHRRLGKRAGIDNDEFARIIEGPDAGWGD--------R 116
Query 129 QQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPDN 188
++A+L+A DEL++ I+ TW LA HLD R LI F LL QYD +A TI L I D
Sbjct 117 ERAMLRAADELVETDDISDTTWAALARHLDDRRLIAFVLLVGQYDGLATTIHTLRIQRDT 176
>gi|343925737|ref|ZP_08765252.1| hypothetical protein GOALK_050_00320 [Gordonia alkanivorans NBRC
16433]
gi|343764088|dbj|GAA12178.1| hypothetical protein GOALK_050_00320 [Gordonia alkanivorans NBRC
16433]
Length=195
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/180 (46%), Positives = 113/180 (63%), Gaps = 9/180 (5%)
Query 10 RISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLL-HGRLP 68
R++PG R LGP N++ A+ AAR +G H+F+TLG + LF + Y+GRL+ G LP
Sbjct 22 RVTPGGLRDLGPFNFVFARGAARVIGVDDAHIFSTLGRAKGLFRGWLHYSGRLMPFGTLP 81
Query 69 GVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSAR 128
D+E++I+RVAHLR C+YEL HHRR+ RR G+D I + PD GD R
Sbjct 82 RKDSEMIIIRVAHLRGCDYELDHHRRLGRRAGIDDAEFERILSGPDAGWGD--------R 133
Query 129 QQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPDN 188
++A+L+A DEL+ + ++ W LA HLD R LIEF LL QYD++A TI L I D+
Sbjct 134 ERAILRAVDELVDTKDVSDIAWAALARHLDNRRLIEFTLLVGQYDSLATTIHTLRIQRDH 193
>gi|118470195|ref|YP_885308.1| hypothetical protein MSMEG_0905 [Mycobacterium smegmatis str.
MC2 155]
gi|118171482|gb|ABK72378.1| 4-carboxymuconolactone decarboxylase domain protein [Mycobacterium
smegmatis str. MC2 155]
Length=186
Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/176 (52%), Positives = 115/176 (66%), Gaps = 8/176 (4%)
Query 15 KFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLLH-GRLPGVDTE 73
R LGP+ W+ A+ ARA+ AP+ HLF +G + F F Y+G LL+ G+LP DTE
Sbjct 17 SLRALGPIGWIAARAGARAIRAPRFHLFDVIGQHKLAFLAFLPYSGVLLNWGKLPKRDTE 76
Query 74 LVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSARQQALL 133
LVILRVAHLR YELQ HRR+AR RGLD TQA IF + PD +G L+ RQ+ L+
Sbjct 77 LVILRVAHLRGSTYELQQHRRLARSRGLDTETQAKIF---EGPDAEG----LTDRQRTLI 129
Query 134 QATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPDNP 189
ATDE + R+++ TW L+THL+ LIEFCLLA YD +AAT+ L IP D P
Sbjct 130 TATDEFVVTRSMSPETWAALSTHLNRAQLIEFCLLAGHYDGLAATMATLRIPLDFP 185
>gi|226361265|ref|YP_002779043.1| hypothetical protein ROP_18510 [Rhodococcus opacus B4]
gi|226239750|dbj|BAH50098.1| hypothetical protein [Rhodococcus opacus B4]
Length=177
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/180 (43%), Positives = 106/180 (59%), Gaps = 8/180 (4%)
Query 9 ARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLL-HGRL 67
ARI PG+ ++LGPVNW + ++ +R G P HLF+T+G LF + Y+G+L+ G++
Sbjct 3 ARIPPGRLKELGPVNWALWRIISRVAGVPDAHLFSTVGRTGGLFRAWLHYSGKLMPGGKI 62
Query 68 PGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSA 127
+TEL+ILRVAHLR C YE+ HH R+ RR G+ + PD D A
Sbjct 63 SRHETELIILRVAHLRKCGYEMDHHVRLGRRAGVTPALLEQVLEGPDAEGWD-------A 115
Query 128 RQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPD 187
R++A+L A D+L+ + TW L + D R LIEFC L TQYDA+A TI L I D
Sbjct 116 RRRAILTAVDQLVTTDNLDDATWSALGAYFDDRRLIEFCFLVTQYDALATTIGTLRIERD 175
>gi|111019126|ref|YP_702098.1| hypothetical protein RHA1_ro02133 [Rhodococcus jostii RHA1]
gi|110818656|gb|ABG93940.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=177
Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/180 (42%), Positives = 107/180 (60%), Gaps = 8/180 (4%)
Query 9 ARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLL-HGRL 67
ARI PG+ ++LGPVNW++ ++ +R G P HLF+T+G + LF + Y+G+L+ G++
Sbjct 3 ARIPPGRLKELGPVNWVLWRIISRVAGVPDAHLFSTVGRTRGLFRAWLQYSGKLMPGGQI 62
Query 68 PGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSA 127
+TEL+ILRVAHLR C YE+ HH R+ RR G+ + P D A
Sbjct 63 SRYETELIILRVAHLRKCGYEMDHHVRLGRRAGVTPALLEQVLEGPGAEGWD-------A 115
Query 128 RQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPD 187
R++A+L A D+L+ + W L+ H D R +IEFC L TQYDA+A TI L I D
Sbjct 116 RRRAILTAVDQLVTTDNLDDAAWSALSIHFDDRRMIEFCFLVTQYDALATTIGTLRIERD 175
>gi|54027235|ref|YP_121477.1| hypothetical protein nfa52610 [Nocardia farcinica IFM 10152]
gi|54018743|dbj|BAD60113.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=181
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/180 (45%), Positives = 108/180 (60%), Gaps = 8/180 (4%)
Query 9 ARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLL-HGRL 67
ARI PG+ R+LGPVNW+V ++ +R G P HLF+TLG + LF + ++G+L+ GRL
Sbjct 7 ARIEPGRLRELGPVNWVVWQVLSRVAGVPDAHLFSTLGRTRGLFRGWLHFSGKLMPGGRL 66
Query 68 PGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSA 127
P ++ELVI+RVAHLR CEYE+ HH R+ RR G+ + P P +
Sbjct 67 PRHESELVIIRVAHLRGCEYEMDHHIRLGRRAGVTPEILDRLRIGPADP-------AWTP 119
Query 128 RQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPD 187
+ +ALL A D+L R I W LA + D R L+E LL QY+ +AATITAL I D
Sbjct 120 KHRALLDAVDQLTTTRDIDDAAWAELAEYYDERELVEIVLLVNQYEGLAATITALRIQRD 179
>gi|326383145|ref|ZP_08204834.1| alkylhydroperoxidase like protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326198281|gb|EGD55466.1| alkylhydroperoxidase like protein [Gordonia neofelifaecis NRRL
B-59395]
Length=177
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/180 (45%), Positives = 106/180 (59%), Gaps = 9/180 (5%)
Query 10 RISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLLH-GRLP 68
R+SPG F LGPVNWLV K A G H+F TLG + LF + ++ R++ G L
Sbjct 5 RVSPGTFGDLGPVNWLVVKAMGLATGTDDPHIFATLGRSRGLFRGWLHFSSRMMPLGELS 64
Query 69 GVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSAR 128
+TE++I+RVAHLR C+YEL HHRR+ R G+DA + I PD GD R
Sbjct 65 RRETEMIIIRVAHLRGCDYELDHHRRLGARAGIDAESFQQILDGPDAGWGD--------R 116
Query 129 QQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPDN 188
+++LL A DEL+ R ++ TW+ L HL R I F LL QYD++A TITAL + D
Sbjct 117 ERSLLLAVDELVATRDLSDLTWDALRRHLTERKAIAFTLLVGQYDSLATTITALRVQRDE 176
>gi|325674001|ref|ZP_08153691.1| 4-carboxymuconolactone decarboxylase domain protein [Rhodococcus
equi ATCC 33707]
gi|325555266|gb|EGD24938.1| 4-carboxymuconolactone decarboxylase domain protein [Rhodococcus
equi ATCC 33707]
Length=189
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/188 (43%), Positives = 104/188 (56%), Gaps = 14/188 (7%)
Query 5 NGQVARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLLH 64
N R+ PG+F++LGPVNW ++ + LF+TLG LF + Y+G L+
Sbjct 10 NHTAPRVRPGRFKELGPVNWAGWRVLSLGSRTRDAKLFSTLGRTGGLFRGWLHYSGVLM- 68
Query 65 GRLPGV-----DTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGD 119
LPG + ELV+LRVAHLR YE QHH R+ RR G+ + A P PD
Sbjct 69 -LLPGTKLSRFEIELVVLRVAHLRGSRYEWQHHVRLGRRAGVTPQILDRVLAGPTDPD-- 125
Query 120 GPRKVLSARQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATI 179
S R +A+L ATD+++ + + TW LA HLD R L+EFCLL TQYD +A TI
Sbjct 126 -----WSPRFRAMLAATDQMVVTKNVDDATWATLAEHLDDRRLVEFCLLVTQYDGLATTI 180
Query 180 TALAIPPD 187
L I PD
Sbjct 181 DTLRIQPD 188
>gi|312141177|ref|YP_004008513.1| 4-carboxymuconolactone decarboxylase [Rhodococcus equi 103S]
gi|311890516|emb|CBH49834.1| putative 4-carboxymuconolactone decarboxylase [Rhodococcus equi
103S]
Length=189
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/188 (43%), Positives = 104/188 (56%), Gaps = 14/188 (7%)
Query 5 NGQVARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLLH 64
N R+ PG+F++LGPVNW ++ + LF+TLG LF + Y+G L+
Sbjct 10 NHTAPRVRPGRFKELGPVNWAGWRVLSLGSRTRDAKLFSTLGRTGGLFRGWLHYSGVLM- 68
Query 65 GRLPGV-----DTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGD 119
LPG + ELV+LRVAHLR YE QHH R+ RR G+ I A P PD
Sbjct 69 -LLPGTKLSRFEIELVVLRVAHLRGSRYEWQHHVRLGRRAGVTPPLLDRILAGPTDPD-- 125
Query 120 GPRKVLSARQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATI 179
S R +A+L ATD+++ + + TW LA HLD R L+EFCLL TQYD +A TI
Sbjct 126 -----WSPRFRAMLAATDQMVATKNVDDATWATLAEHLDDRRLVEFCLLVTQYDGLATTI 180
Query 180 TALAIPPD 187
L I PD
Sbjct 181 DTLRIQPD 188
>gi|336460427|gb|EGO39325.1| hypothetical protein MAPs_40910 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=87
Score = 134 bits (336), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/83 (75%), Positives = 70/83 (85%), Gaps = 0/83 (0%)
Query 10 RISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLLHGRLPG 69
RI G+FRQLGP+NW++AKL AR VGAP+MHLFTTLG R+ LFWT+ Y GRLL G+LP
Sbjct 5 RIPAGRFRQLGPINWVIAKLGARTVGAPEMHLFTTLGQRRLLFWTWLAYGGRLLRGKLPT 64
Query 70 VDTELVILRVAHLRSCEYELQHH 92
DTELVILRVAHLR CEYELQHH
Sbjct 65 ADTELVILRVAHLRGCEYELQHH 87
>gi|269124589|ref|YP_003297959.1| carboxymuconolactone decarboxylase [Thermomonospora curvata DSM
43183]
gi|268309547|gb|ACY95921.1| Carboxymuconolactone decarboxylase [Thermomonospora curvata DSM
43183]
Length=186
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/182 (43%), Positives = 103/182 (57%), Gaps = 8/182 (4%)
Query 10 RISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLL-HGRLP 68
RI+PG RQ+GP WL+A+++ R G + LF TLG + LF + + GRL+ GRLP
Sbjct 12 RIAPGGLRQVGPFTWLLARISGRIAGTGPLALFLTLGRHRRLFHAWLWFAGRLMPGGRLP 71
Query 69 GVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSAR 128
++ELVILRVAHLR C YE +HH R+ R GL A I P +G + R
Sbjct 72 RRESELVILRVAHLRGCRYEWEHHVRLGHRAGLGP---ADIDRVTQGPGAEG----WTPR 124
Query 129 QQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPDN 188
++ALL A D L R + TW L HL IE C+LA+ Y+ +A I AL I PD
Sbjct 125 ERALLTAADRLHHHRDLDDDTWRLLREHLTEPECIELCMLASHYEMLATVIAALRIQPDA 184
Query 189 PQ 190
P+
Sbjct 185 PR 186
>gi|333918267|ref|YP_004491848.1| hypothetical protein AS9A_0594 [Amycolicicoccus subflavus DQS3-9A1]
gi|333480488|gb|AEF39048.1| hypothetical protein AS9A_0594 [Amycolicicoccus subflavus DQS3-9A1]
Length=189
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 102/180 (57%), Gaps = 8/180 (4%)
Query 10 RISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLL-HGRLP 68
RISPG +LGP NW ++LA++ + +HLF+TLG + LF + +++ RL+ G +P
Sbjct 4 RISPGSLAELGPANWGFSRLASQVMRVDDVHLFSTLGQARGLFRAWLMFSARLMPFGSIP 63
Query 69 GVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSAR 128
+ E+ ILR+A+LR C+YE HH R+ +R GL I P P S R
Sbjct 64 RYEVEMAILRIAYLRGCDYEYDHHERLGKRAGLSPAIIDRIERGPSAPG-------WSVR 116
Query 129 QQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPDN 188
ALL A D++I+ + I TWERL+ R LIE +L QYDA+A TI L I D+
Sbjct 117 HAALLTAVDQVIQTKDIDDETWERLSRFYKTRELIEIVMLIGQYDALATTIRVLRIERDH 176
>gi|296141344|ref|YP_003648587.1| carboxymuconolactone decarboxylase [Tsukamurella paurometabola
DSM 20162]
gi|296029478|gb|ADG80248.1| Carboxymuconolactone decarboxylase [Tsukamurella paurometabola
DSM 20162]
Length=172
Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/181 (40%), Positives = 105/181 (59%), Gaps = 11/181 (6%)
Query 8 VARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLL-HGR 66
+ R++PG RQLGP+N+ ++++ A+ + A MHLF+TLG + +F + Y+G L+ G
Sbjct 1 MTRVTPGGLRQLGPINYAISRIGAKVIRADDMHLFSTLGRSRRVFLGWLGYSGMLMPFGA 60
Query 67 LPGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLS 126
L ++E VI+RVA+LR +YEL HHRR+ + GL IF DG G
Sbjct 61 LRRSESETVIVRVAYLRDSDYELGHHRRIGAQAGLTDTQFERIF------DGTG----WD 110
Query 127 ARQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPP 186
+ ALL A EL++ + +T TW RL+ R L+E LLAT YD +A TI L I P
Sbjct 111 DKSAALLAAVTELVETKAVTDDTWARLSEFYTDRKLVEIVLLATNYDGLATTIDVLGITP 170
Query 187 D 187
+
Sbjct 171 E 171
>gi|119717063|ref|YP_924028.1| carboxymuconolactone decarboxylase [Nocardioides sp. JS614]
gi|119537724|gb|ABL82341.1| Carboxymuconolactone decarboxylase [Nocardioides sp. JS614]
Length=187
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/180 (46%), Positives = 101/180 (57%), Gaps = 8/180 (4%)
Query 9 ARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLL-HGRL 67
AR+ PG R++GP A LA R G +F TLG + LFW + + GRL+ GRL
Sbjct 8 ARVRPGGLREVGPFVTAFAWLAGRVSGTVPPAVFLTLGRNRRLFWGWLFFAGRLMPGGRL 67
Query 68 PGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSA 127
P DTELVILRVA L EYE H R+ARR GLDA A + D PD G +
Sbjct 68 PRRDTELVILRVAVLTGSEYEHTQHARLARRAGLDA---AAVDRASDGPDAPG----WTP 120
Query 128 RQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPD 187
RQ LLQATDEL R ++ TW L LD RL IE +L Y+ ++ T+TAL + PD
Sbjct 121 RQALLLQATDELHHTRDLSDPTWAALRAELDERLCIELLMLVGHYEMLSTTLTALRVQPD 180
>gi|319948674|ref|ZP_08022796.1| alkylhydroperoxidase like protein [Dietzia cinnamea P4]
gi|319437656|gb|EFV92654.1| alkylhydroperoxidase like protein [Dietzia cinnamea P4]
Length=197
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/189 (41%), Positives = 100/189 (53%), Gaps = 20/189 (10%)
Query 9 ARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLL-HGRL 67
ARI PG FR+LGP W V ++ AR G+ +HLF TLG + LF + Y+G ++ G L
Sbjct 22 ARIRPGGFRELGPFGWAVNRIGARVTGSRDVHLFATLGRARRLFPAWLAYSGMMMPFGIL 81
Query 68 PGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIF------AWPDVPDGDGP 121
TELVILRVAHLR YE HH R+ R GLD + A WPD
Sbjct 82 DRRTTELVILRVAHLRGSAYERAHHERIGARVGLDDDEIARTTRDPASAGWPD------- 134
Query 122 RKVLSARQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITA 181
R + LL A DEL+ + ++ TW L+ +L P L+ L TQYD +A ++
Sbjct 135 ------RLEVLLTAVDELVHAKDVSDETWAALSEYLTPGELVALVQLVTQYDGLATSLQT 188
Query 182 LAIPPDNPQ 190
L I PD P+
Sbjct 189 LRIQPDRPR 197
>gi|311742817|ref|ZP_07716625.1| 4-carboxymuconolactone decarboxylase domain protein [Aeromicrobium
marinum DSM 15272]
gi|311313497|gb|EFQ83406.1| 4-carboxymuconolactone decarboxylase domain protein [Aeromicrobium
marinum DSM 15272]
Length=181
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/179 (44%), Positives = 103/179 (58%), Gaps = 9/179 (5%)
Query 10 RISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLL-HGRLP 68
RI+PG R LG VN +++ +A RA+G + ++FTTLG ++ LF + Y+ L+ GRL
Sbjct 7 RITPGTRRDLGLVNHVISIVAGRAIGGHRPNVFTTLGRQRRLFRAWLFYSAHLMPGGRLA 66
Query 69 GVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSAR 128
+TELVILRVA R CEYE HHRR+ RR GL A A D P G R
Sbjct 67 RTETELVILRVAATRGCEYESNHHRRIGRRVGLTAEQ----IAHADDPTWSG----WDDR 118
Query 129 QQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPD 187
Q++LL A L+ DR + TW L HLD IEF +L QYD++A T+ L + P+
Sbjct 119 QRSLLVAAGHLVTDRGLDDATWADLRRHLDEAEAIEFLMLCGQYDSLATTLLTLRVQPE 177
>gi|284044574|ref|YP_003394914.1| carboxymuconolactone decarboxylase [Conexibacter woesei DSM 14684]
gi|283948795|gb|ADB51539.1| Carboxymuconolactone decarboxylase [Conexibacter woesei DSM 14684]
Length=220
Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/180 (40%), Positives = 99/180 (55%), Gaps = 8/180 (4%)
Query 10 RISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLL-HGRLP 68
R+ PG R++GP+N LV LAAR G H+FTTL + LF + + RL+ G L
Sbjct 46 RVPPGGRREIGPLNALVCALAARGGGVDAPHVFTTLARHRRLFRPWLRFAARLMPFGTLS 105
Query 69 GVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSAR 128
D ELVILRVA L +YE H + +R GL A A + PD D R
Sbjct 106 RTDAELVILRVAVLCGSDYEWHQHVALGQRAGLTAEQVARVGDGPDAAGWDD-------R 158
Query 129 QQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPDN 188
++ LL+A DEL+++RT++A TW LA + R IE C+LA Y +A T+ A+ + P+
Sbjct 159 ERLLLRAADELVRERTLSAPTWAALAERYEERQRIELCMLAGHYAMLAGTLNAVGVEPER 218
>gi|336460300|gb|EGO39200.1| hypothetical protein MAPs_40960 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=97
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/97 (60%), Positives = 71/97 (74%), Gaps = 2/97 (2%)
Query 94 RMARRRGLDANTQATIFAWPDVPDGDGPRKVLSARQQALLQATDELIKDRTITAGTWERL 153
RMAR GLD + QA IFAWP + R L+ RQQALL ATDE + DRT++ TW +L
Sbjct 1 RMARTAGLDPDLQAAIFAWPQRLEPVQAR--LTVRQQALLAATDEFVNDRTVSEATWRQL 58
Query 154 ATHLDPRLLIEFCLLATQYDAIAATITALAIPPDNPQ 190
A HLD R LIEFCLLA+QYD +AAT++ALAIP D+P+
Sbjct 59 AEHLDRRQLIEFCLLASQYDGLAATMSALAIPLDHPE 95
>gi|296394644|ref|YP_003659528.1| carboxymuconolactone decarboxylase [Segniliparus rotundus DSM
44985]
gi|296181791|gb|ADG98697.1| Carboxymuconolactone decarboxylase [Segniliparus rotundus DSM
44985]
Length=186
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/181 (35%), Positives = 90/181 (50%), Gaps = 8/181 (4%)
Query 10 RISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLLH-GRLP 68
RI+PG F +GP+ W+ K +R +G P + TTLG + LF F Y + ++
Sbjct 8 RIAPGGFWHIGPIAWIANKTGSRLMGVPDYRVVTTLGRNKRLFPFFFAYISYFQYLSQIR 67
Query 69 GVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSAR 128
+ EL ILRVAHLR YEL HH M+ R G+ +A + P P SA+
Sbjct 68 LRNVELAILRVAHLRESVYELNHHIVMSARAGITDEERARVGEGPSAPG-------WSAK 120
Query 129 QQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPDN 188
++ALL A D I D+ I W L H R ++E LL YD++A T + + +
Sbjct 121 EKALLTAVDGYITDKAIADADWAELRRHFHERQILEILLLVGSYDSLATTFDIIGLQTEY 180
Query 189 P 189
P
Sbjct 181 P 181
>gi|317506064|ref|ZP_07963892.1| carboxymuconolactone decarboxylase [Segniliparus rugosus ATCC
BAA-974]
gi|316255636|gb|EFV14878.1| carboxymuconolactone decarboxylase [Segniliparus rugosus ATCC
BAA-974]
Length=181
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/181 (38%), Positives = 94/181 (52%), Gaps = 12/181 (6%)
Query 10 RISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGR---LLHGR 66
RI+PG F ++GP+ W++ + R + Q + +TLG LF F YTG L R
Sbjct 8 RIAPGGFWKIGPLAWVIDQAGRRRLRISQFRVISTLGRNIRLFPFFIGYTGYFQGLSSIR 67
Query 67 LPGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLS 126
L V ELVILRVA+LR YEL HH RM+ R G+ +A + P P S
Sbjct 68 LRNV--ELVILRVANLRGSAYELNHHIRMSARAGVTDEERARVAEGPSAPG-------WS 118
Query 127 ARQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPP 186
A+++ALL A D +KD+ I W LA H +IE +L YD++A TI + I
Sbjct 119 AKEKALLTAVDGFVKDKAIGDADWAELAKHFTEAQIIEILMLTGAYDSLATTIDIVGIQT 178
Query 187 D 187
+
Sbjct 179 E 179
>gi|227549712|ref|ZP_03979761.1| carboxymuconolactone decarboxylase [Corynebacterium lipophiloflavum
DSM 44291]
gi|227078208|gb|EEI16171.1| carboxymuconolactone decarboxylase [Corynebacterium lipophiloflavum
DSM 44291]
Length=187
Score = 100 bits (249), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/183 (35%), Positives = 93/183 (51%), Gaps = 12/183 (6%)
Query 10 RISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLL-HGRLP 68
R PG+ + + L ++ A+ G ++LF +G + F + +Y+G L+ G LP
Sbjct 15 RPGPGRGTDIALLARLANRIGAQVQGTKTLNLFGAVGRARRNFLPWLLYSGSLMPFGILP 74
Query 69 GVDTELVILRVAHLRSCEYELQHHRRMARRRGL-DANTQATIFAWPDVPDGDGPRKVLSA 127
+ELVILRVA LR YEL+HH M +R GL DA+ +A P +
Sbjct 75 RRQSELVILRVATLRDSRYELEHHTTMGKRFGLSDADIEAV----------KRPEHGFTG 124
Query 128 RQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPD 187
R +L AT++LI+ R IT WERL HL + + LL T YD +A + L +P D
Sbjct 125 RTGVILDATNDLIEHRQITDEVWERLRDHLSDKEITALLLLVTNYDGLATVMDVLQVPLD 184
Query 188 NPQ 190
+
Sbjct 185 EKR 187
>gi|296392627|ref|YP_003657511.1| carboxymuconolactone decarboxylase [Segniliparus rotundus DSM
44985]
gi|296179774|gb|ADG96680.1| Carboxymuconolactone decarboxylase [Segniliparus rotundus DSM
44985]
Length=180
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/179 (33%), Positives = 89/179 (50%), Gaps = 8/179 (4%)
Query 10 RISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLLH-GRLP 68
R++ G FRQ+GP+ W + K AR +G + + LG + LF F YTG ++
Sbjct 6 RVALGGFRQIGPLAWAIDKAGARRLGVRHLRIMQALGRNKRLFPFFVGYTGYFQGLSKIK 65
Query 69 GVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSAR 128
+ ELVILRVAHLR YE HH R++ R + A + P S +
Sbjct 66 LRNVELVILRVAHLRGSAYEWNHHVRLSARAKITAAEHERVAEGPGAAG-------WSPK 118
Query 129 QQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPD 187
++ALL A D ++ +++ + LA H D +IE LL YD++A TI + + +
Sbjct 119 EKALLTAVDGFVRQKSLGDEDFAELARHFDEAEIIEILLLTGAYDSLATTIDIIGLQSE 177
>gi|260578935|ref|ZP_05846838.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
43734]
gi|258602909|gb|EEW16183.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
43734]
Length=183
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/186 (31%), Positives = 90/186 (49%), Gaps = 14/186 (7%)
Query 6 GQVARISPGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLL-H 64
G VAR R+LGP ++ AR + +F T+G LF+ + +Y G ++
Sbjct 11 GPVARKQ--HLRRLGPFGAFATRVGARVTKKKNLGVFATIGRAPRLFFFWLLYGGSMMPF 68
Query 65 GRLPGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKV 124
G L V+TE++ILRVA+LR YE HR +A + G+ D+ P
Sbjct 69 GYLSRVETEMIILRVAYLRGSAYEADQHRALAAKVGVK-----------DIDALFQPEHG 117
Query 125 LSARQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAI 184
+ R LL A ++L++DR ++ +RL L R + F +L T YD +A + + +
Sbjct 118 RTGRHGTLLDAAEQLVRDRGLSDDMAQRLRGLLSEREQVAFVMLVTNYDGLATALDVMGV 177
Query 185 PPDNPQ 190
D P+
Sbjct 178 SVDEPR 183
>gi|340794653|ref|YP_004760116.1| hypothetical protein CVAR_1691 [Corynebacterium variabile DSM
44702]
gi|340534563|gb|AEK37043.1| hypothetical protein CVAR_1691 [Corynebacterium variabile DSM
44702]
Length=194
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/181 (33%), Positives = 92/181 (51%), Gaps = 9/181 (4%)
Query 13 PGKFRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLL-HGRLPGVD 71
PG R LGP+N V ++ AR G + +F T+G + + + +Y+ ++ G L +
Sbjct 16 PG-LRDLGPLNHAVERIGARVQGKKTLGVFATIGRVRRMLPPWLVYSATMMPFGALGRAE 74
Query 72 TELVILRVAHLRS---CEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGP-RKVLSA 127
+ELVILRVA L+ +YE+ HH + ++ GL I A V +G P R
Sbjct 75 SELVILRVAALKGNSGGDYEMDHHSALGKKAGL---IDGDIAAATRVDEGWEPGRHGFHG 131
Query 128 RQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPD 187
R+ A+L DE+++ ++ WERLA+ L R + +L T Y +A +T L P D
Sbjct 132 RRGAMLDVADEIVQFGDVSDPAWERLASFLSDRECVALVMLVTNYAGLATALTVLRTPVD 191
Query 188 N 188
Sbjct 192 E 192
>gi|68536235|ref|YP_250940.1| hypothetical protein jk1158 [Corynebacterium jeikeium K411]
gi|68263834|emb|CAI37322.1| hypothetical protein jk1158 [Corynebacterium jeikeium K411]
Length=183
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/174 (30%), Positives = 85/174 (49%), Gaps = 12/174 (6%)
Query 18 QLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLL-HGRLPGVDTELVI 76
+LGP ++ AR + +F T+G LF+ + +Y G ++ G L V+TE++I
Sbjct 21 RLGPFGAFATRVGARVTRKKNLGVFATIGRAPRLFFFWLLYGGSMMPFGYLSRVETEMII 80
Query 77 LRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSARQQALLQAT 136
LRVA+LR YE HR +A + G+ D+ P + R LL A
Sbjct 81 LRVAYLRGSAYEADQHRALAAKVGVK-----------DIDALFQPEHGRTGRHGTLLDAA 129
Query 137 DELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPDNPQ 190
++L++DR ++ +RL L R + F +L T YD +A + + + D P+
Sbjct 130 EQLVRDRGLSDDMAQRLRGLLSEREQVAFVMLVTNYDGLATALDVMGVSVDEPR 183
>gi|336325801|ref|YP_004605767.1| hypothetical protein CRES_1248 [Corynebacterium resistens DSM
45100]
gi|336101783|gb|AEI09603.1| hypothetical protein CRES_1248 [Corynebacterium resistens DSM
45100]
Length=193
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/174 (29%), Positives = 81/174 (47%), Gaps = 10/174 (5%)
Query 16 FRQLGPVNWLVAKLAARAVGAPQMHLFTTLGYRQYLFWTFAIYTGRLL-HGRLPGVDTEL 74
FR LG ++ AR G + +F T+G LF + +Y ++ G L +TE+
Sbjct 27 FRLLGLFGAFATRVGARVTGKKNLGVFATIGRAPRLFRFWLLYGASMMPFGYLSRAETEM 86
Query 75 VILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSARQQALLQ 134
+ILRVA+LR YE HR +A R G+ + IF P + R LL
Sbjct 87 LILRVAYLRGSAYEADQHRALAARAGVSSVDIDAIFR---------PDHGFTGRIGTLLD 137
Query 135 ATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDAIAATITALAIPPDN 188
A +++++ + +T +R+ L R + F +L YD +A + + +P D
Sbjct 138 AAEQIVRHQGLTEDMAKRVRGLLSEREQVAFVMLVCNYDGLATALDVMGVPVDE 191
>gi|145223027|ref|YP_001133705.1| carboxymuconolactone decarboxylase [Mycobacterium gilvum PYR-GCK]
gi|315443483|ref|YP_004076362.1| hypothetical protein Mspyr1_18660 [Mycobacterium sp. Spyr1]
gi|145215513|gb|ABP44917.1| Carboxymuconolactone decarboxylase [Mycobacterium gilvum PYR-GCK]
gi|315261786|gb|ADT98527.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length=176
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/149 (35%), Positives = 67/149 (45%), Gaps = 11/149 (7%)
Query 40 HLFTTLGYRQYLFWTFAIYTGRLLHGR-LPGVDTELVILRVAHLRSCEYELQHHRRMARR 98
+L TL L F + LL+G LP EL +LR+AHL CEYE HH M R
Sbjct 35 NLVATLVRHPRLAKGFLRFNFHLLYGSSLPARLRELAVLRIAHLTKCEYEWLHHVEMGRE 94
Query 99 RGLDANTQATIFAWPDVPDGDGPRKVLSARQQALLQATDELIKDRTITAGTWERLATHLD 158
GL DV DG + +A+L A DEL D ++ TW L+ HLD
Sbjct 95 AGLS----------DDVIDGITRGEATDGLDRAVLNAVDELQNDSVVSDATWTALSDHLD 144
Query 159 PRLLIEFCLLATQYDAIAATITALAIPPD 187
R L++ Y A+A I + PD
Sbjct 145 ERQLMDLVFTIGCYGALAMAINTFGVEPD 173
>gi|120405166|ref|YP_954995.1| carboxymuconolactone decarboxylase [Mycobacterium vanbaalenii
PYR-1]
gi|119957984|gb|ABM14989.1| Carboxymuconolactone decarboxylase [Mycobacterium vanbaalenii
PYR-1]
Length=176
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/140 (36%), Positives = 67/140 (48%), Gaps = 14/140 (10%)
Query 48 RQYLFWTFAIYTGRLLHGRLPGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQA 107
R +L + F + G L RL E V+LRVA L +CEYE +HH M R GL + A
Sbjct 48 RAFLRFNFQLLYGTTLPERL----REFVVLRVARLSNCEYEWRHHVAMGRDAGLSDDVIA 103
Query 108 TIFAWPDVPDGDGPRKVLSARQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCL 167
I V + D +A+L A DEL D I+ TW L++HLD R L++
Sbjct 104 GIERGEAVDEFD----------RAVLTAVDELHHDSVISDSTWTALSSHLDERQLMDLVF 153
Query 168 LATQYDAIAATITALAIPPD 187
Y A+A I + PD
Sbjct 154 TIGCYGALAMAINTFGVEPD 173
>gi|271967553|ref|YP_003341749.1| carboxymuconolactone decarboxylase [Streptosporangium roseum
DSM 43021]
gi|270510728|gb|ACZ89006.1| carboxymuconolactone decarboxylase [Streptosporangium roseum
DSM 43021]
Length=179
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/156 (36%), Positives = 73/156 (47%), Gaps = 10/156 (6%)
Query 31 ARAV-GAPQMHLFTTLGYRQYLFWTFAIYTGRLLHGRLPGVDTELVILRVAHLRSCEYEL 89
AR V G ++FTTL LF + + LL+G LP D EL +LR AH R YE
Sbjct 11 ARVVEGTGPYNVFTTLARHPALFQAWIGFGAALLYGTLPARDRELAVLRTAHNRGSAYEW 70
Query 90 QHHRRMARRRGLDANTQATIFAWPDVPDGDGPRKVLSARQQALLQATDELIKDRTITAGT 149
H R+AR GL T+A I A G G A + +L+ DE+ + I T
Sbjct 71 VQHVRLAREAGL---TEAEIEAVRGHGHGWG------AGDRLVLEVADEMHRSGDIADET 121
Query 150 WERLATHLDPRLLIEFCLLATQYDAIAATITALAIP 185
WE L D IE +L YD +A +T L +P
Sbjct 122 WEALCARYDEPGRIELVMLVAHYDMLAVVLTVLRVP 157
>gi|312198224|ref|YP_004018285.1| carboxymuconolactone decarboxylase [Frankia sp. EuI1c]
gi|311229560|gb|ADP82415.1| Carboxymuconolactone decarboxylase [Frankia sp. EuI1c]
Length=203
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/150 (34%), Positives = 74/150 (50%), Gaps = 8/150 (5%)
Query 39 MHLFTTLGYRQYLFWTFAIYTGRLLHGR-LPGVDTELVILRVAHLRSCEYELQHHRRMAR 97
++L TL + L F + G +L+G L EL++LRVA LR C+YE H +AR
Sbjct 43 VNLLGTLAHYPELTREFLSFNGHILYGTTLSARQRELLVLRVAALRKCDYEWAQHTILAR 102
Query 98 RRGLDANTQATIFAWPDVPDGDGPRKVLSARQQALLQATDELIKDRTITAGTWERLATHL 157
GL I PD PD G S +++LL+A DEL+ D + TW LA
Sbjct 103 DAGL---RDEEIRRVPDGPDAPG----WSLVERSLLRAVDELLADARVGDETWSVLAHEF 155
Query 158 DPRLLIEFCLLATQYDAIAATITALAIPPD 187
D R L++ Y+ +A + + A+ P+
Sbjct 156 DERQLMDVIFTVGTYEMVAFALRSFAVEPE 185
>gi|288920237|ref|ZP_06414551.1| Carboxymuconolactone decarboxylase [Frankia sp. EUN1f]
gi|288348341|gb|EFC82604.1| Carboxymuconolactone decarboxylase [Frankia sp. EUN1f]
Length=192
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/194 (31%), Positives = 87/194 (45%), Gaps = 22/194 (11%)
Query 8 VARISPGKFRQLGPVNWLVAKLAARAVGAPQ------------MHLFTTLGYRQYLFWTF 55
+ARI P R+ + A LAA AP+ ++ T+ + L F
Sbjct 1 MARIEPRPLREWP--KEMRAALAAMTPEAPRHPPLPTEGRSKALNTLGTMAHHPELAHAF 58
Query 56 AIYTGRLLHGR-LPGVDTELVILRVAHLRSCEYELQHHRRMARRRGLDANTQATIFAWPD 114
+ G +L G L E+++LRVA +R YE H MAR G+ A + PD
Sbjct 59 FTFNGHILRGTTLTLRQREMIVLRVATVRKVGYEWAQHVIMARDLGMTDAEIARVAWGPD 118
Query 115 VPDGDGPRKVLSARQQALLQATDELIKDRTITAGTWERLATHLDPRLLIEFCLLATQYDA 174
P L ALL+A DELI D I A TWE LA+ LD + L++ YD
Sbjct 119 AP-------FLDPLDAALLRAVDELIIDGGIGAATWEFLASKLDVQQLLDIIFTTGTYDM 171
Query 175 IAATITALAIPPDN 188
+A +++ +P D+
Sbjct 172 LAMMMSSFELPLDD 185
>gi|108800711|ref|YP_640908.1| carboxymuconolactone decarboxylase [Mycobacterium sp. MCS]
gi|119869850|ref|YP_939802.1| carboxymuconolactone decarboxylase [Mycobacterium sp. KMS]
gi|126436334|ref|YP_001072025.1| carboxymuconolactone decarboxylase [Mycobacterium sp. JLS]
gi|108771130|gb|ABG09852.1| Carboxymuconolactone decarboxylase [Mycobacterium sp. MCS]
gi|119695939|gb|ABL93012.1| Carboxymuconolactone decarboxylase [Mycobacterium sp. KMS]
gi|126236134|gb|ABN99534.1| Carboxymuconolactone decarboxylase [Mycobacterium sp. JLS]
Length=176
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/149 (35%), Positives = 69/149 (47%), Gaps = 11/149 (7%)
Query 40 HLFTTLGYRQYLFWTFAIYTGRLL-HGRLPGVDTELVILRVAHLRSCEYELQHHRRMARR 98
+L TTL L F + LL LP EL ILRVAHL EYE +HH M R
Sbjct 35 NLLTTLARHPRLTRAFLRFNVHLLFRSTLPARLRELAILRVAHLLGSEYEWEHHVAMGRE 94
Query 99 RGLDANTQATIFAWPDVPDGDGPRKVLSARQQALLQATDELIKDRTITAGTWERLATHLD 158
GL + A I G+G ++ QA+L A D+L + I+ TW +L+ HLD
Sbjct 95 VGL---SDAAIEG---AARGEGADEL----DQAILDAVDQLQEKANISDHTWAQLSAHLD 144
Query 159 PRLLIEFCLLATQYDAIAATITALAIPPD 187
R ++ Y A+A I + PD
Sbjct 145 ERQRMDLVFTIGCYGALAMAINTFGVEPD 173
Lambda K H
0.325 0.138 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 190262535070
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40