BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0475
Length=199
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607616|ref|NP_214989.1| iron-regulated heparin binding hema... 379 2e-103
gi|253797403|ref|YP_003030404.1| iron-regulated heparin binding ... 378 2e-103
gi|3309266|gb|AAC26052.1| heparin-binding hemagglutinin [Mycobac... 375 3e-102
gi|15839865|ref|NP_334902.1| hypothetical protein MT0493 [Mycoba... 374 3e-102
gi|339293525|gb|AEJ45636.1| iron-regulated heparin binding hemag... 287 8e-76
gi|254549423|ref|ZP_05139870.1| iron-regulated heparin binding h... 284 5e-75
gi|118619638|ref|YP_907970.1| iron-regulated heparin binding hem... 250 6e-65
gi|183980824|ref|YP_001849115.1| iron-regulated heparin binding ... 250 9e-65
gi|254819803|ref|ZP_05224804.1| hypothetical protein MintA_07759... 249 1e-64
gi|254777112|ref|ZP_05218628.1| hypothetical protein MaviaA2_209... 248 3e-64
gi|240169858|ref|ZP_04748517.1| iron-regulated heparin binding h... 246 1e-63
gi|41410066|ref|NP_962902.1| hypothetical protein MAP3968 [Mycob... 243 8e-63
gi|33327135|gb|AAQ08948.1| heparin-binding hemagglutinin adhesin... 243 1e-62
gi|296168077|ref|ZP_06850143.1| heparin-binding hemagglutinin [M... 241 4e-62
gi|118463469|ref|YP_883803.1| heparin binding hemagglutinin hbha... 241 5e-62
gi|342859023|ref|ZP_08715677.1| hypothetical protein MCOL_09103 ... 240 7e-62
gi|333989103|ref|YP_004521717.1| iron-regulated heparin binding ... 237 8e-61
gi|336460416|gb|EGO39314.1| hypothetical protein MAPs_40800 [Myc... 235 3e-60
gi|15828329|ref|NP_302592.1| hemagglutinin [Mycobacterium leprae... 234 6e-60
gi|120401823|ref|YP_951652.1| hypothetical protein Mvan_0808 [My... 229 1e-58
gi|108797623|ref|YP_637820.1| hypothetical protein Mmcs_0643 [My... 229 2e-58
gi|145220706|ref|YP_001131384.1| hypothetical protein Mflv_0100 ... 220 8e-56
gi|118468465|ref|YP_885322.1| heparin-binding hemagglutinin [Myc... 214 5e-54
gi|169631161|ref|YP_001704810.1| Heparin-binding hemagglutinin [... 143 1e-32
gi|312141148|ref|YP_004008484.1| hypothetical protein REQ_38170 ... 140 7e-32
gi|229490214|ref|ZP_04384061.1| heparin-binding hemagglutinin [R... 140 1e-31
gi|226305078|ref|YP_002765036.1| heparin-binding hemagglutinin [... 139 3e-31
gi|226361237|ref|YP_002779015.1| heparin-binding hemagglutinin [... 130 8e-29
gi|111019097|ref|YP_702069.1| hypothetical protein RHA1_ro02104 ... 130 1e-28
gi|343925746|ref|ZP_08765261.1| putative heparin-binding hemaggl... 130 1e-28
gi|302030861|gb|ADK91819.1| TadA [Rhodococcus opacus PD630] 130 2e-28
gi|326383139|ref|ZP_08204828.1| hypothetical protein SCNU_09381 ... 124 8e-27
gi|296141332|ref|YP_003648575.1| hypothetical protein Tpau_3658 ... 120 1e-25
gi|262200766|ref|YP_003271974.1| hypothetical protein Gbro_0765 ... 118 5e-25
gi|296393893|ref|YP_003658777.1| heparin-binding hemagglutinin [... 112 3e-23
gi|317508729|ref|ZP_07966382.1| hypothetical protein HMPREF9336_... 111 8e-23
gi|262200775|ref|YP_003271983.1| hypothetical protein Gbro_0774 ... 97.4 1e-18
gi|319948666|ref|ZP_08022788.1| hypothetical protein ES5_04758 [... 94.7 7e-18
gi|54027182|ref|YP_121424.1| putative heparin-binding hemaggluti... 85.5 4e-15
gi|343925753|ref|ZP_08765268.1| putative heparin-binding hemaggl... 84.0 1e-14
gi|324997739|ref|ZP_08118851.1| membrane spanning protein [Pseud... 83.2 2e-14
gi|331694467|ref|YP_004330706.1| membrane protein [Pseudonocardi... 82.4 3e-14
gi|333918283|ref|YP_004491864.1| Heparin-binding hemagglutinin [... 80.5 1e-13
gi|302523790|ref|ZP_07276132.1| predicted protein [Streptomyces ... 72.8 3e-11
gi|300782360|ref|YP_003762651.1| membrane spanning protein [Amyc... 66.2 2e-09
gi|256380756|ref|YP_003104416.1| hypothetical protein Amir_6773 ... 63.5 2e-08
gi|134103415|ref|YP_001109076.1| membrane spanning protein [Sacc... 55.8 3e-06
gi|257054326|ref|YP_003132158.1| hypothetical protein Svir_02490... 52.4 4e-05
gi|258651085|ref|YP_003200241.1| hypothetical protein Namu_0841 ... 40.0 0.17
gi|326332011|ref|ZP_08198296.1| putative LigA [Nocardioidaceae b... 38.9 0.44
>gi|15607616|ref|NP_214989.1| iron-regulated heparin binding hemagglutinin hbhA (adhesin) [Mycobacterium
tuberculosis H37Rv]
gi|31791655|ref|NP_854148.1| heparin binding hemagglutinin HBHA (adhesin) [Mycobacterium bovis
AF2122/97]
gi|121636391|ref|YP_976614.1| Heparin binding hemagglutinin hbhA [Mycobacterium bovis BCG str.
Pasteur 1173P2]
66 more sequence titles
Length=199
Score = 379 bits (972), Expect = 2e-103, Method: Compositional matrix adjust.
Identities = 199/199 (100%), Positives = 199/199 (100%), Gaps = 0/199 (0%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL
Sbjct 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
Query 61 QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA 120
QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA
Sbjct 61 QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA 120
Query 121 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK 180
RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK
Sbjct 121 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK 180
Query 181 AAAKKAPAKKAAAKKVTQK 199
AAAKKAPAKKAAAKKVTQK
Sbjct 181 AAAKKAPAKKAAAKKVTQK 199
>gi|253797403|ref|YP_003030404.1| iron-regulated heparin binding hemagglutinin hbhA [Mycobacterium
tuberculosis KZN 1435]
gi|254230823|ref|ZP_04924150.1| iron-regulated heparin binding hemagglutinin hbhA (adhesin) [Mycobacterium
tuberculosis C]
gi|308370416|ref|ZP_07421433.2| iron-regulated heparin binding hemagglutinin hbhA [Mycobacterium
tuberculosis SUMu003]
11 more sequence titles
Length=204
Score = 378 bits (971), Expect = 2e-103, Method: Compositional matrix adjust.
Identities = 199/199 (100%), Positives = 199/199 (100%), Gaps = 0/199 (0%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL
Sbjct 6 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 65
Query 61 QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA 120
QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA
Sbjct 66 QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA 125
Query 121 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK 180
RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK
Sbjct 126 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK 185
Query 181 AAAKKAPAKKAAAKKVTQK 199
AAAKKAPAKKAAAKKVTQK
Sbjct 186 AAAKKAPAKKAAAKKVTQK 204
>gi|3309266|gb|AAC26052.1| heparin-binding hemagglutinin [Mycobacterium tuberculosis]
Length=199
Score = 375 bits (962), Expect = 3e-102, Method: Compositional matrix adjust.
Identities = 198/199 (99%), Positives = 198/199 (99%), Gaps = 0/199 (0%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL
Sbjct 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
Query 61 QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA 120
QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA
Sbjct 61 QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA 120
Query 121 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK 180
AEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK
Sbjct 121 PAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK 180
Query 181 AAAKKAPAKKAAAKKVTQK 199
AAAKKAPAKKAAAKKVTQK
Sbjct 181 AAAKKAPAKKAAAKKVTQK 199
>gi|15839865|ref|NP_334902.1| hypothetical protein MT0493 [Mycobacterium tuberculosis CDC1551]
gi|13880000|gb|AAK44716.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length=204
Score = 374 bits (961), Expect = 3e-102, Method: Compositional matrix adjust.
Identities = 198/199 (99%), Positives = 198/199 (99%), Gaps = 0/199 (0%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL
Sbjct 6 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 65
Query 61 QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA 120
QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA
Sbjct 66 QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA 125
Query 121 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK 180
RAE YVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK
Sbjct 126 RAEXYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK 185
Query 181 AAAKKAPAKKAAAKKVTQK 199
AAAKKAPAKKAAAKKVTQK
Sbjct 186 AAAKKAPAKKAAAKKVTQK 204
>gi|339293525|gb|AEJ45636.1| iron-regulated heparin binding hemagglutinin hbhA [Mycobacterium
tuberculosis CCDC5079]
Length=164
Score = 287 bits (734), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 153/153 (100%), Positives = 153/153 (100%), Gaps = 0/153 (0%)
Query 47 RSRVEESRARLTKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAAL 106
RSRVEESRARLTKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAAL
Sbjct 12 RSRVEESRARLTKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAAL 71
Query 107 ERLRSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPA 166
ERLRSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPA
Sbjct 72 ERLRSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPA 131
Query 167 KKAAPAKKAAPAKKAAAKKAPAKKAAAKKVTQK 199
KKAAPAKKAAPAKKAAAKKAPAKKAAAKKVTQK
Sbjct 132 KKAAPAKKAAPAKKAAAKKAPAKKAAAKKVTQK 164
>gi|254549423|ref|ZP_05139870.1| iron-regulated heparin binding hemagglutinin hbhA [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
Length=200
Score = 284 bits (727), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 149/159 (94%), Positives = 149/159 (94%), Gaps = 0/159 (0%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
MAENSN DDIKAPLL L ATVNELITNLRERAEETRTDTRSRVEESRARLTKL
Sbjct 2 MAENSNNDDIKAPLLPRLERPTWPWATVNELITNLRERAEETRTDTRSRVEESRARLTKL 61
Query 61 QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA 120
QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA
Sbjct 62 QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA 121
Query 121 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIEL 159
RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIEL
Sbjct 122 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIEL 160
>gi|118619638|ref|YP_907970.1| iron-regulated heparin binding hemagglutinin HbhA [Mycobacterium
ulcerans Agy99]
gi|118571748|gb|ABL06499.1| iron-regulated heparin binding hemagglutinin HbhA [Mycobacterium
ulcerans Agy99]
Length=206
Score = 250 bits (639), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 143/162 (89%), Positives = 156/162 (97%), Gaps = 0/162 (0%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
MAEN+NI+D+ APLLAALGAADLALATVN+LI NLR+RAEETRTDTRSRVEESRARLTKL
Sbjct 6 MAENTNIEDLWAPLLAALGAADLALATVNDLIANLRDRAEETRTDTRSRVEESRARLTKL 65
Query 61 QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA 120
QEDLPEQ TELRE+FT++ELRKAAEGYLEAAT RYN+LV+RGEAALERLRSQ +FE+ SA
Sbjct 66 QEDLPEQFTELRERFTSDELRKAAEGYLEAATGRYNDLVQRGEAALERLRSQPAFEDASA 125
Query 121 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKK 162
RAEGYVDQAVELTQEALGTVA+QTRAVGERAAKLVGIELPKK
Sbjct 126 RAEGYVDQAVELTQEALGTVATQTRAVGERAAKLVGIELPKK 167
>gi|183980824|ref|YP_001849115.1| iron-regulated heparin binding hemagglutinin HbhA [Mycobacterium
marinum M]
gi|183174150|gb|ACC39260.1| iron-regulated heparin binding hemagglutinin HbhA [Mycobacterium
marinum M]
Length=201
Score = 250 bits (638), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 143/162 (89%), Positives = 157/162 (97%), Gaps = 0/162 (0%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
MAEN+NI+D++APLLAALGAADLALATVN+LI NLR+RAEETRTDTRSRVEESRARLTKL
Sbjct 1 MAENTNIEDLRAPLLAALGAADLALATVNDLIANLRDRAEETRTDTRSRVEESRARLTKL 60
Query 61 QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA 120
QEDLPEQ TELRE+FT++ELRKAAEGYLEAAT RYN+LV+RGEAALERLRSQ +FE+ SA
Sbjct 61 QEDLPEQFTELRERFTSDELRKAAEGYLEAATGRYNDLVQRGEAALERLRSQPAFEDASA 120
Query 121 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKK 162
RAEGYVDQAVELTQEALGTVA+QTRAVGERAAKLVGIELPKK
Sbjct 121 RAEGYVDQAVELTQEALGTVATQTRAVGERAAKLVGIELPKK 162
>gi|254819803|ref|ZP_05224804.1| hypothetical protein MintA_07759 [Mycobacterium intracellulare
ATCC 13950]
Length=215
Score = 249 bits (637), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 148/173 (86%), Positives = 161/173 (94%), Gaps = 1/173 (0%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
MAENSNI+D++APLLAALGAADLALATVN+LI +LRERAEETR +TR+RVEE RARLTKL
Sbjct 11 MAENSNIEDLRAPLLAALGAADLALATVNDLIASLRERAEETRVETRTRVEERRARLTKL 70
Query 61 QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA 120
QEDLPEQ TELR++FTA+ELRKAAEGYLEAATSRYNELVERGEAAL+RLRSQ +FE+ SA
Sbjct 71 QEDLPEQFTELRDRFTADELRKAAEGYLEAATSRYNELVERGEAALQRLRSQTAFEDASA 130
Query 121 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKA-APAKKAAPA 172
RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP K A AKKA A
Sbjct 131 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPGKTEATAKKAQKA 183
>gi|254777112|ref|ZP_05218628.1| hypothetical protein MaviaA2_20934 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=205
Score = 248 bits (634), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 145/168 (87%), Positives = 155/168 (93%), Gaps = 0/168 (0%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
MAEN NIDD++APLLAALGAADLALATVN+LI NLRERAEETR +TR+RVEE RARLTK
Sbjct 1 MAENPNIDDLRAPLLAALGAADLALATVNDLIANLRERAEETRAETRTRVEERRARLTKF 60
Query 61 QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA 120
QEDLPEQ TELR+KFT EELRKAAEGYLEAAT+RYNELVERGEAAL+RLRSQ +FE+ SA
Sbjct 61 QEDLPEQFTELRDKFTTEELRKAAEGYLEAATNRYNELVERGEAALQRLRSQTAFEDASA 120
Query 121 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKK 168
RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP KA A K
Sbjct 121 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPGKAEAAGK 168
>gi|240169858|ref|ZP_04748517.1| iron-regulated heparin binding hemagglutinin HbhA [Mycobacterium
kansasii ATCC 12478]
Length=209
Score = 246 bits (629), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/167 (88%), Positives = 157/167 (95%), Gaps = 4/167 (2%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVE----ESRAR 56
MAEN NI+D++APLLAALGAADLALATVN+LI NLRERAEETRTDTR+RVE ESRAR
Sbjct 6 MAENPNIEDLRAPLLAALGAADLALATVNDLIANLRERAEETRTDTRTRVEARVEESRAR 65
Query 57 LTKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFE 116
LTKLQEDLPEQ +ELRE+FTAEELRKAAEGYL+AAT+RYNELV+RGEAALERLRSQ FE
Sbjct 66 LTKLQEDLPEQFSELRERFTAEELRKAAEGYLDAATNRYNELVQRGEAALERLRSQPVFE 125
Query 117 EVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKA 163
+ SARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKA
Sbjct 126 DASARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKA 172
>gi|41410066|ref|NP_962902.1| hypothetical protein MAP3968 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398899|gb|AAS06518.1| hypothetical protein MAP_3968 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=195
Score = 243 bits (621), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 141/160 (89%), Positives = 151/160 (95%), Gaps = 0/160 (0%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
MAEN NIDD++APLLAALGAADLALATVN+LI NLRERAEETR +TR+RVEE RARLTK
Sbjct 6 MAENPNIDDLRAPLLAALGAADLALATVNDLIANLRERAEETRAETRTRVEERRARLTKF 65
Query 61 QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA 120
QEDLPEQ TELR+KFT EELRKAAEGYLEAAT+RYNELVERGEAAL+RLRSQ +FE+ SA
Sbjct 66 QEDLPEQFTELRDKFTTEELRKAAEGYLEAATNRYNELVERGEAALQRLRSQTAFEDASA 125
Query 121 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP 160
RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP
Sbjct 126 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP 165
>gi|33327135|gb|AAQ08948.1| heparin-binding hemagglutinin adhesin-like protein [Mycobacterium
avium subsp. paratuberculosis]
Length=190
Score = 243 bits (620), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 141/160 (89%), Positives = 151/160 (95%), Gaps = 0/160 (0%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
MAEN NIDD++APLLAALGAADLALATVN+LI NLRERAEETR +TR+RVEE RARLTK
Sbjct 1 MAENPNIDDLRAPLLAALGAADLALATVNDLIANLRERAEETRAETRTRVEERRARLTKF 60
Query 61 QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA 120
QEDLPEQ TELR+KFT EELRKAAEGYLEAAT+RYNELVERGEAAL+RLRSQ +FE+ SA
Sbjct 61 QEDLPEQFTELRDKFTTEELRKAAEGYLEAATNRYNELVERGEAALQRLRSQTAFEDASA 120
Query 121 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP 160
RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP
Sbjct 121 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP 160
>gi|296168077|ref|ZP_06850143.1| heparin-binding hemagglutinin [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896884|gb|EFG76512.1| heparin-binding hemagglutinin [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=206
Score = 241 bits (615), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 138/163 (85%), Positives = 154/163 (95%), Gaps = 0/163 (0%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
MA+N+NI+D++APLLAALGAADLALATVN+LI LRERAEETR DTR+RVEESRARLT+L
Sbjct 6 MADNTNIEDLRAPLLAALGAADLALATVNDLIAGLRERAEETRADTRTRVEESRARLTRL 65
Query 61 QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA 120
QEDLPEQ ELRE+FT+EELRKAAEGYL+AAT+RYNELVERGEAAL+RLRSQ ++ SA
Sbjct 66 QEDLPEQFDELRERFTSEELRKAAEGYLDAATNRYNELVERGEAALQRLRSQTGLDDASA 125
Query 121 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKA 163
RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKK+
Sbjct 126 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKS 168
>gi|118463469|ref|YP_883803.1| heparin binding hemagglutinin hbha [Mycobacterium avium 104]
gi|118164756|gb|ABK65653.1| heparin binding hemagglutinin hbha [Mycobacterium avium 104]
Length=205
Score = 241 bits (614), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 140/160 (88%), Positives = 150/160 (94%), Gaps = 0/160 (0%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
MAEN NIDD++APLLAALGAADLALATVN+LI NLRERAEETR +TR+RV E RARLTK
Sbjct 1 MAENPNIDDLRAPLLAALGAADLALATVNDLIANLRERAEETRAETRTRVGERRARLTKF 60
Query 61 QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA 120
QEDLPEQ TELR+KFT EELRKAAEGYLEAAT+RYNELVERGEAAL+RLRSQ +FE+ SA
Sbjct 61 QEDLPEQFTELRDKFTTEELRKAAEGYLEAATNRYNELVERGEAALQRLRSQTAFEDASA 120
Query 121 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP 160
RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP
Sbjct 121 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP 160
>gi|342859023|ref|ZP_08715677.1| hypothetical protein MCOL_09103 [Mycobacterium colombiense CECT
3035]
gi|342133264|gb|EGT86467.1| hypothetical protein MCOL_09103 [Mycobacterium colombiense CECT
3035]
Length=206
Score = 240 bits (613), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 139/162 (86%), Positives = 153/162 (95%), Gaps = 0/162 (0%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
MAEN+NI+D++APLLAALGAADLALATVN+LI LRERAEETR +TR+RVEE RARLTKL
Sbjct 6 MAENTNIEDLRAPLLAALGAADLALATVNDLIAGLRERAEETRAETRTRVEERRARLTKL 65
Query 61 QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA 120
QEDLPEQ TELR++FT EELRKAAEGYLEAAT+RYNELVERGEAAL+RLR+Q +FE+ SA
Sbjct 66 QEDLPEQFTELRDRFTTEELRKAAEGYLEAATTRYNELVERGEAALQRLRNQTAFEDASA 125
Query 121 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKK 162
RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP K
Sbjct 126 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPGK 167
>gi|333989103|ref|YP_004521717.1| iron-regulated heparin binding hemagglutinin HbhA [Mycobacterium
sp. JDM601]
gi|333485071|gb|AEF34463.1| iron-regulated heparin binding hemagglutinin HbhA [Mycobacterium
sp. JDM601]
Length=206
Score = 237 bits (604), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 120/162 (75%), Positives = 139/162 (86%), Gaps = 0/162 (0%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
MAEN NID++KAPLLAA+GAADLALATV +L+ LRERA E R D +RVEESRARLTKL
Sbjct 1 MAENPNIDELKAPLLAAIGAADLALATVTDLVATLRERAGEAREDATTRVEESRARLTKL 60
Query 61 QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA 120
QE+LPEQ ELRE+FTA+ELR+AAEGY EAA+ RY++LV RGEAAL RLR+Q ++ SA
Sbjct 61 QEELPEQFAELRERFTADELRRAAEGYAEAASGRYSDLVARGEAALVRLRNQSGLDDASA 120
Query 121 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKK 162
+ EGYVDQAVELTQE LG VA+QTR VGERAAKLVGIELP+K
Sbjct 121 QVEGYVDQAVELTQEVLGNVATQTREVGERAAKLVGIELPQK 162
>gi|336460416|gb|EGO39314.1| hypothetical protein MAPs_40800 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=205
Score = 235 bits (600), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/160 (88%), Positives = 149/160 (94%), Gaps = 0/160 (0%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
MAEN NIDD+ APLLAALGAADLALATVN+LI NLRERAEETR +TR+RVEE RARLTK
Sbjct 1 MAENPNIDDLPAPLLAALGAADLALATVNDLIANLRERAEETRAETRTRVEERRARLTKF 60
Query 61 QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA 120
QEDLPEQ ELR+KFT EELRKAAEGYLEAAT+RYNELVERGEAAL+RLRSQ +FE+ SA
Sbjct 61 QEDLPEQFIELRDKFTTEELRKAAEGYLEAATNRYNELVERGEAALQRLRSQTAFEDASA 120
Query 121 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP 160
RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP
Sbjct 121 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP 160
>gi|15828329|ref|NP_302592.1| hemagglutinin [Mycobacterium leprae TN]
gi|221230806|ref|YP_002504222.1| putative hemagglutinin [Mycobacterium leprae Br4923]
gi|15214041|sp|Q9CB42.1|HBHA_MYCLE RecName: Full=Heparin-binding hemagglutinin homolog; AltName:
Full=Adhesin
gi|13094022|emb|CAC31971.1| possible hemagglutinin [Mycobacterium leprae]
gi|219933913|emb|CAR72553.1| possible hemagglutinin [Mycobacterium leprae Br4923]
Length=188
Score = 234 bits (596), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 137/159 (87%), Positives = 148/159 (94%), Gaps = 0/159 (0%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
MAEN N+DD++APLLAALGAADLAL TVNEL+ N+RERAEETR DTRSRVEESRAR+ KL
Sbjct 1 MAENPNVDDLRAPLLAALGAADLALTTVNELVGNMRERAEETRIDTRSRVEESRARVAKL 60
Query 61 QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA 120
QE LPE L+ELREKFTA+ELRKAAEGYLEAAT+RYNELVERGEAALERLRS+ FE+ SA
Sbjct 61 QEVLPEHLSELREKFTADELRKAAEGYLEAATNRYNELVERGEAALERLRSRPVFEDASA 120
Query 121 RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIEL 159
RAEGYVDQAVELTQEALGTVASQTRAVG RAAKLVGIEL
Sbjct 121 RAEGYVDQAVELTQEALGTVASQTRAVGGRAAKLVGIEL 159
>gi|120401823|ref|YP_951652.1| hypothetical protein Mvan_0808 [Mycobacterium vanbaalenii PYR-1]
gi|119954641|gb|ABM11646.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=216
Score = 229 bits (585), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/164 (73%), Positives = 138/164 (85%), Gaps = 4/164 (2%)
Query 1 MAENS----NIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRAR 56
MAE + +IDD+KAPLLAA+GAADLAL VNE++ LRERA E RTD++SRVEESRAR
Sbjct 1 MAETNKNQLDIDDLKAPLLAAVGAADLALERVNEIVATLRERAGEARTDSKSRVEESRAR 60
Query 57 LTKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFE 116
+TKLQEDLP Q ++REK TAEELRK AEGY EAA S YN+L+ERGEAA+ERLR+Q + E
Sbjct 61 ITKLQEDLPAQFGDIREKLTAEELRKFAEGYAEAAQSTYNKLIERGEAAIERLRTQPALE 120
Query 117 EVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP 160
E ++R E Y DQAVELTQEALG VASQTRAVGERAAKLVG+ELP
Sbjct 121 EAASRVEEYTDQAVELTQEALGNVASQTRAVGERAAKLVGVELP 164
>gi|108797623|ref|YP_637820.1| hypothetical protein Mmcs_0643 [Mycobacterium sp. MCS]
gi|119866710|ref|YP_936662.1| hypothetical protein Mkms_0656 [Mycobacterium sp. KMS]
gi|126433247|ref|YP_001068938.1| hypothetical protein Mjls_0636 [Mycobacterium sp. JLS]
gi|108768042|gb|ABG06764.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119692799|gb|ABL89872.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126233047|gb|ABN96447.1| hypothetical protein Mjls_0636 [Mycobacterium sp. JLS]
Length=203
Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/165 (73%), Positives = 141/165 (86%), Gaps = 3/165 (1%)
Query 1 MAENS---NIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARL 57
MAE + +I+D+KAPLLAA+GAADLALATVNE++ +LR+RAEE RTD SRVEESRAR+
Sbjct 1 MAEKNPQVDIEDLKAPLLAAVGAADLALATVNEIVASLRDRAEEARTDANSRVEESRARI 60
Query 58 TKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEE 117
KLQE+LP Q+TELRE+ TA+ELR+AAEGY EAA S Y +LVERGEAALERLRSQ F +
Sbjct 61 NKLQEELPTQVTELRERLTADELRRAAEGYAEAAQSTYAKLVERGEAALERLRSQPGFTD 120
Query 118 VSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKK 162
+ R E Y DQAVELT++ALG VA+QTRAVGERAAKLVG+ELPKK
Sbjct 121 AANRVETYTDQAVELTEQALGNVATQTRAVGERAAKLVGVELPKK 165
>gi|145220706|ref|YP_001131384.1| hypothetical protein Mflv_0100 [Mycobacterium gilvum PYR-GCK]
gi|315442342|ref|YP_004075221.1| hypothetical protein Mspyr1_06830 [Mycobacterium sp. Spyr1]
gi|145213192|gb|ABP42596.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315260645|gb|ADT97386.1| hypothetical protein Mspyr1_06830 [Mycobacterium sp. Spyr1]
Length=220
Score = 220 bits (561), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 115/166 (70%), Positives = 135/166 (82%), Gaps = 3/166 (1%)
Query 1 MAENSN---IDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARL 57
MAE N +DD+KAPLLAA+GAADLAL VNE++ LRERA + RTD +RVEESRAR+
Sbjct 1 MAEAKNQLDVDDLKAPLLAAVGAADLALERVNEIVATLRERAGDARTDAETRVEESRARV 60
Query 58 TKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEE 117
KLQEDLP Q +LR++ T++ELRK AEGY EAA + Y +L+ERGEAALERLRSQ + E
Sbjct 61 AKLQEDLPNQFGDLRDRLTSDELRKFAEGYAEAAQTTYTKLIERGEAALERLRSQPALEG 120
Query 118 VSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKA 163
++R E Y DQAVELTQEALG VASQTRAVGERAAKLVG+ELPKKA
Sbjct 121 AASRVEEYTDQAVELTQEALGNVASQTRAVGERAAKLVGVELPKKA 166
>gi|118468465|ref|YP_885322.1| heparin-binding hemagglutinin [Mycobacterium smegmatis str. MC2
155]
gi|68525472|gb|AAY98786.1| HBHA-like protein [Mycobacterium smegmatis str. MC2 155]
gi|118169752|gb|ABK70648.1| heparin-binding hemagglutinin [Mycobacterium smegmatis str. MC2
155]
Length=232
Score = 214 bits (545), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 115/166 (70%), Positives = 133/166 (81%), Gaps = 9/166 (5%)
Query 6 NIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQEDLP 65
++++KAPLLAA+GAADLALATVNE+I L ERA E R+D +RVEESRARLTKLQE+LP
Sbjct 8 TVEELKAPLLAAVGAADLALATVNEIIATLLERAGEARSDAEARVEESRARLTKLQEELP 67
Query 66 EQLTELREKFTA---------EELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFE 116
Q ELREK + EELRKAAE Y + AT+ YN+LVERGEAALERLR+Q + E
Sbjct 68 SQFGELREKLNSDELRKKLNSEELRKAAESYADQATATYNKLVERGEAALERLRNQPALE 127
Query 117 EVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKK 162
E + R E Y DQAVELTQEALGTVASQTRAVGERAAKLVG+ELPK+
Sbjct 128 EAATRVETYTDQAVELTQEALGTVASQTRAVGERAAKLVGVELPKR 173
>gi|169631161|ref|YP_001704810.1| Heparin-binding hemagglutinin [Mycobacterium abscessus ATCC 19977]
gi|169243128|emb|CAM64156.1| Heparin-binding hemagglutinin (adhesin) [Mycobacterium abscessus]
Length=216
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/156 (59%), Positives = 114/156 (74%), Gaps = 0/156 (0%)
Query 4 NSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQED 63
N++ DD+K P A+GA DLALA V +++ LRERAEE ++ +RV+E+R RL +L +
Sbjct 5 NTSFDDLKTPFYVAVGAGDLALAAVADVVVKLRERAEEAASEAGARVDETRDRLRELSAE 64
Query 64 LPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSARAE 123
LP + ELR++FT EELRK AE YL+ AT YN L ERGE A+ERLRS EE RAE
Sbjct 65 LPTDVNELRDRFTPEELRKVAEAYLQVATDIYNNLAERGEEAIERLRSTPGIEENVTRAE 124
Query 124 GYVDQAVELTQEALGTVASQTRAVGERAAKLVGIEL 159
G V ELT++ALGTVASQTRAVGERAAKLVGI+L
Sbjct 125 GLVGNYAELTEQALGTVASQTRAVGERAAKLVGIDL 160
>gi|312141148|ref|YP_004008484.1| hypothetical protein REQ_38170 [Rhodococcus equi 103S]
gi|325674030|ref|ZP_08153720.1| heparin-binding hemagglutinin [Rhodococcus equi ATCC 33707]
gi|311890487|emb|CBH49805.1| conserved hypothetical protein [Rhodococcus equi 103S]
gi|325555295|gb|EGD24967.1| heparin-binding hemagglutinin [Rhodococcus equi ATCC 33707]
Length=285
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/174 (47%), Positives = 106/174 (61%), Gaps = 18/174 (10%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRAR---- 56
M + +++IK P AA+G DL + V ++++ +R RAE T TD R++E+R R
Sbjct 1 MTDPKIVENIKTPFYAAVGTGDLVVQAVADVVSQVRARAENTNTDVSGRIDEARERWANL 60
Query 57 --------------LTKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERG 102
L L +LPE+L ELRE+FT EELRK AE YL+ A+ Y L ERG
Sbjct 61 PTEVSEGVEQLRERLAALPSELPEELAELRERFTPEELRKVAEAYLKVASDLYVALAERG 120
Query 103 EAALERLRSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVG 156
E A+ER+R Q + EE RAE AVELT+EALGTVA QTR +GE+AAKL G
Sbjct 121 EEAVERIRKQPAVEEQLGRAEAVFGDAVELTEEALGTVARQTRELGEQAAKLAG 174
>gi|229490214|ref|ZP_04384061.1| heparin-binding hemagglutinin [Rhodococcus erythropolis SK121]
gi|229322962|gb|EEN88736.1| heparin-binding hemagglutinin [Rhodococcus erythropolis SK121]
Length=275
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/174 (49%), Positives = 109/174 (63%), Gaps = 18/174 (10%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
M + + ID +K L AA+GA DL + V +++ +RERAE T+ D RV+ +R +L +
Sbjct 1 MTDKNAIDSVKTSLYAAVGAGDLVVQAVADVVAQVRERAENTQGDVNGRVDGAREKLASV 60
Query 61 QED------------------LPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERG 102
Q D LPE+L ELREKF+ EELRK AE YL+ A YN L ERG
Sbjct 61 QGDVAESVDALRERLAGLPSELPEELAELREKFSPEELRKVAEAYLKVAGDLYNSLAERG 120
Query 103 EAALERLRSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVG 156
E A+ER+R Q + EE A AE + AVELT++ALGTVA QTRAVGE+AAKL G
Sbjct 121 EDAVERIRKQPAVEEGIAAAESALGDAVELTEDALGTVARQTRAVGEQAAKLAG 174
>gi|226305078|ref|YP_002765036.1| heparin-binding hemagglutinin [Rhodococcus erythropolis PR4]
gi|226184193|dbj|BAH32297.1| putative heparin-binding hemagglutinin [Rhodococcus erythropolis
PR4]
Length=275
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/174 (49%), Positives = 108/174 (63%), Gaps = 18/174 (10%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
M + + ID +K L AA+GA DL + V +++ +RERAE T+ D RV+ +R +L +
Sbjct 1 MTDKNAIDSVKTSLYAAVGAGDLVVQAVADVVAQVRERAENTQGDVNGRVDGAREKLASV 60
Query 61 QED------------------LPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERG 102
Q D LPE+L ELREKF EELRK AE YL+ A YN L ERG
Sbjct 61 QGDVAESVEALRERLAGLPSELPEELAELREKFAPEELRKVAEAYLKVAGDLYNSLAERG 120
Query 103 EAALERLRSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVG 156
E A+ER+R Q + EE A AE + AVELT++ALGTVA QTRAVGE+AAKL G
Sbjct 121 EDAVERIRKQPAVEEGIAAAESALGDAVELTEDALGTVARQTRAVGEQAAKLAG 174
>gi|226361237|ref|YP_002779015.1| heparin-binding hemagglutinin [Rhodococcus opacus B4]
gi|226239722|dbj|BAH50070.1| putative heparin-binding hemagglutinin [Rhodococcus opacus B4]
Length=274
Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/175 (48%), Positives = 105/175 (60%), Gaps = 18/175 (10%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
M + ID +K L AA+GA D+ + V +++ +R RAE T+ D RV ++ R L
Sbjct 1 MTDQKTIDSVKTSLYAAVGAGDVVVQAVADVVAQVRSRAESTQGDVEERVGGAKERFAGL 60
Query 61 QED------------------LPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERG 102
QE+ LPE+L ELREKFTA+ELRK AE YL+ A+ Y L ERG
Sbjct 61 QEEVTEGVENLRDRLAGLPSELPEELAELREKFTADELRKVAEAYLKVASDLYTSLAERG 120
Query 103 EAALERLRSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGI 157
E +ER+R Q EE RAE AVELT+EALGTVA QTRAVGE+AAKL G+
Sbjct 121 EDTVERIRKQPVVEEGIGRAETAFGDAVELTEEALGTVARQTRAVGEQAAKLAGL 175
>gi|111019097|ref|YP_702069.1| hypothetical protein RHA1_ro02104 [Rhodococcus jostii RHA1]
gi|110818627|gb|ABG93911.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=276
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/174 (48%), Positives = 105/174 (61%), Gaps = 18/174 (10%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
M + ID +K L AA+GA D+ + V +++ +R RAE T+ D RV ++ R+ L
Sbjct 1 MTDQKTIDSVKTSLYAAVGAGDVVVQAVADVVAQVRSRAESTQGDVEERVGGAKERIAGL 60
Query 61 QED------------------LPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERG 102
QE+ LPE+L ELREKFTA+ELRK AE YL+ A+ Y L ERG
Sbjct 61 QEEVTEGVENLRDRLAGLPSELPEELAELREKFTADELRKVAEAYLKVASDLYTSLAERG 120
Query 103 EAALERLRSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVG 156
E +ER+R Q EE RAE AVELT+EALGTVA QTRAVGE+AAKL G
Sbjct 121 EDTVERIRKQPVVEEGIGRAETAFGDAVELTEEALGTVARQTRAVGEQAAKLAG 174
>gi|343925746|ref|ZP_08765261.1| putative heparin-binding hemagglutinin [Gordonia alkanivorans
NBRC 16433]
gi|343764097|dbj|GAA12187.1| putative heparin-binding hemagglutinin [Gordonia alkanivorans
NBRC 16433]
Length=260
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/167 (47%), Positives = 102/167 (62%), Gaps = 22/167 (13%)
Query 12 APLLAALGAADLALATVNELITNLRERAE------ETRTDTR----------------SR 49
APL AA+GA D A V E +T LRER E +TR + R SR
Sbjct 8 APLYAAVGAGDYAFTQVTEKLTELRERTEAAAETAQTRLEARYTETKALITDLPETAQSR 67
Query 50 VEESRARLTKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERL 109
+E++ R+ L E++P ++ ELR K TA+EL+K A+ Y+E AT YN L ERGEA LERL
Sbjct 68 FDEAKTRIESLSEEVPTEIDELRGKLTADELKKLADPYVEKATDFYNTLAERGEATLERL 127
Query 110 RSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVG 156
R + +E +R E + AV++T++ALG V+SQTR VGERAAKL G
Sbjct 128 RKKPVVQENLSRVEKVYNDAVDITEDALGVVSSQTRLVGERAAKLAG 174
>gi|302030861|gb|ADK91819.1| TadA [Rhodococcus opacus PD630]
Length=276
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/174 (48%), Positives = 105/174 (61%), Gaps = 18/174 (10%)
Query 1 MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL 60
M + ID +K L AA+GA D+ + V +++ +R RAE T+ D RV ++ R+ L
Sbjct 1 MTDQKTIDSVKTSLYAAVGAGDVVVQAVADVVAQVRSRAESTQGDVEERVGGAKERIAGL 60
Query 61 QED------------------LPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERG 102
QE+ LPE+L ELREKFTA+ELRK AE YL+ A+ Y L ERG
Sbjct 61 QEEVTEGVENLRDRLAGLPSELPEELAELREKFTADELRKVAEAYLKVASDLYTSLAERG 120
Query 103 EAALERLRSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVG 156
E +ER+R Q EE RAE AVELT+EALGTVA QTRAVGE+AAKL G
Sbjct 121 EDTVERIRKQPVVEEGIGRAETAFGDAVELTEEALGTVARQTRAVGEQAAKLAG 174
>gi|326383139|ref|ZP_08204828.1| hypothetical protein SCNU_09381 [Gordonia neofelifaecis NRRL
B-59395]
gi|326198275|gb|EGD55460.1| hypothetical protein SCNU_09381 [Gordonia neofelifaecis NRRL
B-59395]
Length=230
Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/137 (51%), Positives = 95/137 (70%), Gaps = 1/137 (0%)
Query 13 PLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQEDLPEQLTELR 72
P+ A +GA D+A+ V + + L+ RA+ +R T++R++E+RARLT+L + P + ELR
Sbjct 11 PVYAVVGAGDVAVQEVKDALAELKTRAQASRERTQTRLDETRARLTELPTEFP-SVEELR 69
Query 73 EKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSARAEGYVDQAVEL 132
K TA+ELRK AE Y+EA T YN L ERGE A+ERLR EE AR E + AV+L
Sbjct 70 AKLTADELRKVAEPYIEATTGLYNSLAERGEGAVERLRQTPYVEENLARVEKAYNDAVDL 129
Query 133 TQEALGTVASQTRAVGE 149
T++ALG V++QTRAVGE
Sbjct 130 TEDALGAVSTQTRAVGE 146
>gi|296141332|ref|YP_003648575.1| hypothetical protein Tpau_3658 [Tsukamurella paurometabola DSM
20162]
gi|296029466|gb|ADG80236.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length=180
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/158 (44%), Positives = 95/158 (61%), Gaps = 11/158 (6%)
Query 10 IKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRAR-----------LT 58
+K PL A +GA D A V+E+I LR A + D +RV E++A+ LT
Sbjct 6 LKTPLFATIGAGDYAYEAVSEVIEKLRAAATDASKDFDTRVAEAKAKVEEAAGTATAKLT 65
Query 59 KLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEV 118
++ LP+ + ELR +FT++ELRK A Y++ AT Y L ERGE+A ERL S E+
Sbjct 66 DAKDGLPKDVDELRARFTSDELRKVAAAYIQVATDIYESLAERGESAFERLTSGSIVEDA 125
Query 119 SARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVG 156
+ +A +QAVELT+ +LG VA + VGERAAKLVG
Sbjct 126 TGQATKAYNQAVELTESSLGQVADAAKQVGERAAKLVG 163
>gi|262200766|ref|YP_003271974.1| hypothetical protein Gbro_0765 [Gordonia bronchialis DSM 43247]
gi|262084113|gb|ACY20081.1| hypothetical protein Gbro_0765 [Gordonia bronchialis DSM 43247]
Length=229
Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/148 (48%), Positives = 98/148 (67%), Gaps = 5/148 (3%)
Query 13 PLLAALGAADLALATVNELITNLRER----AEETRTDTRSRVEESRARLTKLQEDLPEQL 68
PL A+GA D A V + +T +RER AE+ + +R EE++ R+ L E++P +
Sbjct 11 PLYVAVGAGDYAYQQVTDKLTEIRERTETAAEKAQARLEARFEETKTRVEALPEEVP-SV 69
Query 69 TELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSARAEGYVDQ 128
ELR K T +ELRK A+ Y++ AT YN L ERGEAA+E+LR++ +E RAE +
Sbjct 70 EELRAKLTVDELRKIADPYVDKATEFYNSLAERGEAAVEKLRTRPVVQENLTRAEKAYND 129
Query 129 AVELTQEALGTVASQTRAVGERAAKLVG 156
AV+LT++ALG V+SQTR VG+RAAKL G
Sbjct 130 AVDLTEDALGVVSSQTRLVGDRAAKLTG 157
>gi|296393893|ref|YP_003658777.1| heparin-binding hemagglutinin [Segniliparus rotundus DSM 44985]
gi|296181040|gb|ADG97946.1| heparin-binding hemagglutinin (adhesin) [Segniliparus rotundus
DSM 44985]
Length=179
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/158 (45%), Positives = 100/158 (64%), Gaps = 6/158 (3%)
Query 1 MAEN---SNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRAR- 56
MAE SN+D IKAP AA+G DLALA V++++ +RE AE+ ++ R++V+E+R +
Sbjct 1 MAEQKTASNLD-IKAPFYAAVGFGDLALAAVSDIVEKIRETAEDAASEVRAKVDEARDKH 59
Query 57 LTKLQEDLPE-QLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSF 115
L K E + + + ++ KF+ EELRK AE Y + A ++ L ERGE A +RL
Sbjct 60 LPKKAEKIEQSDIKDILTKFSPEELRKVAEAYSKVALDIFSHLAERGEEATKRLLKSGEV 119
Query 116 EEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAK 153
++V DQA ELT EALG VAS TRA+GERA+K
Sbjct 120 QDVKNAVANKADQARELTDEALGKVASGTRALGERASK 157
>gi|317508729|ref|ZP_07966382.1| hypothetical protein HMPREF9336_02754 [Segniliparus rugosus ATCC
BAA-974]
gi|316252977|gb|EFV12394.1| hypothetical protein HMPREF9336_02754 [Segniliparus rugosus ATCC
BAA-974]
Length=183
Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/170 (42%), Positives = 102/170 (60%), Gaps = 4/170 (2%)
Query 9 DIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQEDLPEQL 68
DIKAP AA+G D ALA VN+++ +RE AE ++ ++V E+R + + + E +
Sbjct 14 DIKAPFYAAVGVGDFALAAVNDIVEKIRETAESATSEVLAKVNEARDKHLPEKGEKAEPI 73
Query 69 TELRE---KFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSARAEGY 125
++R+ KF+ EELRK AE Y + A +N L ERGE A +RL Q ++V
Sbjct 74 GDIRDLVAKFSPEELRKVAEAYSKVALDIFNLLAERGEEATKRLLKQSEVQDVKKAVADK 133
Query 126 VDQAVELTQEALGTVASQTRAVGERAAKLVGI-ELPKKAAPAKKAAPAKK 174
VD+ ELT +ALG VAS TRA+GE+A+K G +++A KKA A+K
Sbjct 134 VDEVRELTDDALGKVASGTRALGEQASKGTGTGSTTRRSAATKKADSAEK 183
>gi|262200775|ref|YP_003271983.1| hypothetical protein Gbro_0774 [Gordonia bronchialis DSM 43247]
gi|262084122|gb|ACY20090.1| hypothetical protein Gbro_0774 [Gordonia bronchialis DSM 43247]
Length=356
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/167 (41%), Positives = 94/167 (57%), Gaps = 13/167 (7%)
Query 36 RERAEETRTDTRSRV-----------EESRARLTKLQEDLPEQLTELREKFTAEELRKAA 84
+ R ET +T++R+ EE+R +L+ L ++P ++ ELR +F+ EELR A
Sbjct 65 QSRLAETAENTQARIDDALATALALFEEARVKLSSLPIEVPAEIEELRNRFSPEELRSVA 124
Query 85 EGYLEAATSRYNELVERGEAALERLRSQQSFEEVSARAEGYVDQAVELTQEALGTVASQT 144
E YL A L ERGE +++L+SQ + E + AV LT +ALG V++QT
Sbjct 125 EAYLAVAAGLLTSLSERGEEVVDKLKSQPVVGSNLPKLEKVYNDAVGLTGDALGVVSAQT 184
Query 145 RAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKKAAAKKAPAKKA 191
R VGERAAKL G + PA+K+ AK APA A A APAK A
Sbjct 185 RLVGERAAKLAGAADDTRELPAQKSPAAK--APATVAEAVGAPAKTA 229
>gi|319948666|ref|ZP_08022788.1| hypothetical protein ES5_04758 [Dietzia cinnamea P4]
gi|319437648|gb|EFV92646.1| hypothetical protein ES5_04758 [Dietzia cinnamea P4]
Length=411
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/172 (38%), Positives = 92/172 (54%), Gaps = 26/172 (15%)
Query 10 IKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRA--------RLTKLQ 61
++ P+ A +GA DLA+ V+ L+ +LR RAE+ +D +SRV E + R+T Q
Sbjct 38 VRTPVYAYVGANDLAIQAVSGLVNDLRRRAEDAVSDAQSRVTERVSDVQNRITERVTGAQ 97
Query 62 E----------DLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRS 111
E LP ++ EL +F EELRK A+ Y++ A Y L RGE + RLR
Sbjct 98 ERVSEVPDRVQSLPAEVEELVNRFRPEELRKVADAYVQVAAGIYGGLAARGEDVVSRLRE 157
Query 112 QQS--------FEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLV 155
+ E ARA V++ EL +EALGTVA QTR++G +AA V
Sbjct 158 ENPQLEAGLARVNEQVARAADAVEEQRELGEEALGTVARQTRSIGVKAAGRV 209
>gi|54027182|ref|YP_121424.1| putative heparin-binding hemagglutinin [Nocardia farcinica IFM
10152]
gi|54018690|dbj|BAD60060.1| putative heparin-binding hemagglutinin [Nocardia farcinica IFM
10152]
Length=221
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/149 (39%), Positives = 75/149 (51%), Gaps = 20/149 (13%)
Query 10 IKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQED------ 63
+ PLLAA+GA D +++T +RE+A T TD RVEE+R R + D
Sbjct 8 VTKPLLAAVGAGDAVYTAALDVVTQVREKA--TTTDVSGRVEEARERFAHVPADVQAQFE 65
Query 64 ------------LPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRS 111
LP++L ELREKFTAEELRK AE Y Y++L RGE +ERLR+
Sbjct 66 SLRERLAGLPTELPDELAELREKFTAEELRKLAEEYYAKVLDLYSDLAVRGEETVERLRA 125
Query 112 QQSFEEVSARAEGYVDQAVELTQEALGTV 140
E+ R E A +E +G V
Sbjct 126 NHLVEDQIERVESLYKDAASRAEEVVGRV 154
>gi|343925753|ref|ZP_08765268.1| putative heparin-binding hemagglutinin [Gordonia alkanivorans
NBRC 16433]
gi|343764104|dbj|GAA12194.1| putative heparin-binding hemagglutinin [Gordonia alkanivorans
NBRC 16433]
Length=361
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/108 (46%), Positives = 68/108 (63%), Gaps = 0/108 (0%)
Query 50 VEESRARLTKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERL 109
EE++++L+ L +LP ++ ELR +F+ EELRK AE YL A L ER + A+ +L
Sbjct 90 FEEAKSKLSTLPVELPSEIEELRARFSPEELRKVAEAYLAVAAGLLTSLSERRDEAVGKL 149
Query 110 RSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGI 157
SQ E + E AV LT+EALGT++ QTRAVGERA +L G+
Sbjct 150 LSQPVVGENLPKLEKVYSDAVGLTEEALGTISEQTRAVGERALRLAGL 197
>gi|324997739|ref|ZP_08118851.1| membrane spanning protein [Pseudonocardia sp. P1]
Length=245
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/154 (34%), Positives = 81/154 (53%), Gaps = 22/154 (14%)
Query 11 KAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQEDLPEQLTE 70
+ PL+A +G D A TV++ +T++R A + R EE + R+ ++ PE+L E
Sbjct 29 RTPLMAVIGVGDYAYTTVSKAVTDVRTTATQ-------RAEEVQTRV----QEFPEELKE 77
Query 71 LREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSF-----------EEVS 119
LR K +++ LRK E + Y +RGE A +LR Q E+
Sbjct 78 LRGKLSSDSLRKQVEEFRSEVEGVYVGFAQRGEKAWGKLRKQPQVKNAIDTVEDLTEKFD 137
Query 120 ARAEGYVDQAVELTQEALGTVASQTRAVGERAAK 153
AR +G+VD+ + +AL TV +QTR+VGE+ A+
Sbjct 138 ARVDGFVDETHDAAAKALDTVTTQTRSVGEKVAR 171
>gi|331694467|ref|YP_004330706.1| membrane protein [Pseudonocardia dioxanivorans CB1190]
gi|326949156|gb|AEA22853.1| membrane spanning protein [Pseudonocardia dioxanivorans CB1190]
Length=266
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/154 (39%), Positives = 77/154 (50%), Gaps = 22/154 (14%)
Query 11 KAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQEDLPEQLTE 70
K PLLA LGA D A+A V T R RAE+ R+ V + R DLP +L
Sbjct 30 KTPLLAVLGAGDRAVAGVTRFATEARTRAEK-----RADVVQQRVL------DLPAELDG 78
Query 71 LREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEE-----------VS 119
LR + T +ELRKA E E + Y EL RGE R+R Q E+ +
Sbjct 79 LRARLTGDELRKAVEAVREQVAAYYAELAGRGEVTWGRIRKQPQVEQALSALGEYGEKLD 138
Query 120 ARAEGYVDQAVELTQEALGTVASQTRAVGERAAK 153
AR + VD A + ++AL TV QTRA GE+ A+
Sbjct 139 ARVDELVDDAHDAAEKALATVTRQTRATGEKVAR 172
>gi|333918283|ref|YP_004491864.1| Heparin-binding hemagglutinin [Amycolicicoccus subflavus DQS3-9A1]
gi|333480504|gb|AEF39064.1| Heparin-binding hemagglutinin [Amycolicicoccus subflavus DQS3-9A1]
Length=273
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/145 (40%), Positives = 82/145 (57%), Gaps = 1/145 (0%)
Query 10 IKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQEDLPEQLT 69
+K PL AA+GA DLA+ V + +LR RA TDT++R + +R ++ L +P L+
Sbjct 1 MKTPLFAAVGAGDLAVEAVGGFVKDLRGRAATAATDTQARAQRTREIISSLPSQVPSDLS 60
Query 70 ELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSARAEGYVDQA 129
ELR + E+ RK AE YL+ A Y EL +RGE +E +R Q E A G ++A
Sbjct 61 ELRARINGEDFRKQAESYLQNAAGAYGELAQRGEGRIESIRRQPVLEARLTEAAGATEEA 120
Query 130 V-ELTQEALGTVASQTRAVGERAAK 153
+ ELT+ + TRAVG AA+
Sbjct 121 IEELTRRSRFVRDFATRAVGRIAAR 145
>gi|302523790|ref|ZP_07276132.1| predicted protein [Streptomyces sp. AA4]
gi|302432685|gb|EFL04501.1| predicted protein [Streptomyces sp. AA4]
Length=229
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/163 (34%), Positives = 83/163 (51%), Gaps = 22/163 (13%)
Query 4 NSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQED 63
N+ +D ++ PLLAALGA +LA V + + + R + E +R L E+
Sbjct 14 NTALDQVRTPLLAALGAGNLASQAVTDAVA-------KARANVTKNTEAARKGL----EE 62
Query 64 LPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQ----QSFEEV- 118
LP + LREK ELRKA + Y EAA YN+L E GE A +++ +Q ++ E++
Sbjct 63 LPTDVESLREKLDPAELRKAIDEYTEAALKLYNKLAESGEQAWDKIAAQPQVKKAIEQLE 122
Query 119 ------SARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLV 155
R EG ++ E L V +TR+ GE+AA+ V
Sbjct 123 DALTAAQERVEGLTEETRERVDGVLAKVTKRTRSAGEKAARKV 165
>gi|300782360|ref|YP_003762651.1| membrane spanning protein [Amycolatopsis mediterranei U32]
gi|299791874|gb|ADJ42249.1| membrane spanning protein [Amycolatopsis mediterranei U32]
gi|340523726|gb|AEK38931.1| membrane spanning protein [Amycolatopsis mediterranei S699]
Length=229
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/160 (32%), Positives = 76/160 (48%), Gaps = 22/160 (13%)
Query 7 IDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQEDLPE 66
+D ++ PLLAALGA +LA V + + +E ++ R ++E LP
Sbjct 17 LDQVRTPLLAALGAGNLATHAVTDAVAKAKENVTKSGEVARKNLQE-----------LPT 65
Query 67 QLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQ-------QSFEEVS 119
+ LREK ELRK + Y EAA YN+L E GE A +++ +Q + EE
Sbjct 66 DVESLREKLDPAELRKVIDEYTEAALKLYNKLAESGEQAWDKIATQPQVKKAIEQLEEAL 125
Query 120 ARAEGYVD----QAVELTQEALGTVASQTRAVGERAAKLV 155
A+G + + E L V +TR+ GE+ A+ V
Sbjct 126 TTAQGQAEVVSTEVRERVDGVLAKVTKRTRSAGEKTARKV 165
>gi|256380756|ref|YP_003104416.1| hypothetical protein Amir_6773 [Actinosynnema mirum DSM 43827]
gi|255925059|gb|ACU40570.1| hypothetical protein Amir_6773 [Actinosynnema mirum DSM 43827]
Length=194
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/107 (38%), Positives = 60/107 (57%), Gaps = 7/107 (6%)
Query 46 TRSRVEESRARLTKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAA 105
+ RVE +RA EDLP ELR +F A ELRK + Y ++A Y L E+GE A
Sbjct 46 VKDRVESARAGA----EDLP---AELRGRFDAAELRKVVDAYTKSAVDLYQYLAEQGEHA 98
Query 106 LERLRSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAA 152
LE+L++Q + ++ + D A ++ + LG V +TR+ GE+ A
Sbjct 99 LEKLKTQPQVQRALSQVDQAADDANKIADDVLGKVTRRTRSTGEKLA 145
>gi|134103415|ref|YP_001109076.1| membrane spanning protein [Saccharopolyspora erythraea NRRL 2338]
gi|291006045|ref|ZP_06564018.1| membrane spanning protein [Saccharopolyspora erythraea NRRL 2338]
gi|133916038|emb|CAM06151.1| membrane spanning protein [Saccharopolyspora erythraea NRRL 2338]
Length=260
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/116 (38%), Positives = 58/116 (50%), Gaps = 12/116 (10%)
Query 43 RTDTRSRVEESRARLTKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERG 102
RT+ R E +RA DLP L ELR + ELRK + Y ++A Y+ L ERG
Sbjct 54 RTELNDRAESARA-------DLPSDLNELRGQLDPAELRKRLDAYTQSAVKLYDYLAERG 106
Query 103 EAALERLRSQ-----QSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAK 153
E ALERL+ Q + E R E V + L + LG V R+ GE+AA+
Sbjct 107 EGALERLQPQVQQARKQAETAQGRVEEVVGEVRVLADDVLGKVTRGARSYGEKAAR 162
>gi|257054326|ref|YP_003132158.1| hypothetical protein Svir_02490 [Saccharomonospora viridis DSM
43017]
gi|256584198|gb|ACU95331.1| hypothetical protein Svir_02490 [Saccharomonospora viridis DSM
43017]
Length=230
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/134 (33%), Positives = 63/134 (48%), Gaps = 23/134 (17%)
Query 4 NSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQED 63
N+ + ++ LLAALGA LA V E ++ ++RV S + ED
Sbjct 14 NTAKEQVRTSLLAALGAGSLAGRAVVETVSK-----------AKTRVSSSSDAAKRNVED 62
Query 64 LPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSARAE 123
LP +L ELRE+ ELRK + Y +A Y+ L GE Q+++EV E
Sbjct 63 LPSELGELRERLDPAELRKTWDEYTDAMVKLYHRLAASGE---------QTWDEV---VE 110
Query 124 GYVDQAVELTQEAL 137
V + +E +EAL
Sbjct 111 PQVKRGIEQVEEAL 124
>gi|258651085|ref|YP_003200241.1| hypothetical protein Namu_0841 [Nakamurella multipartita DSM
44233]
gi|258554310|gb|ACV77252.1| hypothetical protein Namu_0841 [Nakamurella multipartita DSM
44233]
Length=394
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/81 (28%), Positives = 40/81 (50%), Gaps = 4/81 (4%)
Query 35 LRERAEETRTDTRSRVEESRARL----TKLQEDLPEQLTELREKFTAEELRKAAEGYLEA 90
L++RA + TD ++ A++ +L +LP ++ E T E +R + Y+E
Sbjct 145 LQQRAAQIATDVAEEIQTFTAQIPEKANELVAELPRRVAEFTPDLTPETVRDTLDAYIEM 204
Query 91 ATSRYNELVERGEAALERLRS 111
+ Y L ERG+ ++RS
Sbjct 205 VGTIYESLAERGDKTWSKVRS 225
>gi|326332011|ref|ZP_08198296.1| putative LigA [Nocardioidaceae bacterium Broad-1]
gi|325950149|gb|EGD42204.1| putative LigA [Nocardioidaceae bacterium Broad-1]
Length=183
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/130 (25%), Positives = 62/130 (48%), Gaps = 26/130 (20%)
Query 13 PLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQEDLPEQLTE-- 70
PL A G ADLA TV + T+L+++ + R++ +++ ++RA+ T+ Q TE
Sbjct 12 PLNAVAGVADLAYETVKDFATDLQKKVDGYRSEATTKLTDARAKATEKATAYRTQATEKA 71
Query 71 ------------------LREKFTA--EELRKAAEGYLE----AATSRYNELVERGEAAL 106
+E++T E+L+ + L+ +AT Y++L RGE +
Sbjct 72 TAAKSTVTGFDPKTLPALAKEQYTVLPEKLKTTVKAKLDETTGSATGTYDKLATRGETFV 131
Query 107 ERLRSQQSFE 116
+ + ++ E
Sbjct 132 AKFKKSEAVE 141
Lambda K H
0.306 0.120 0.300
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 215040480604
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40