BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0475

Length=199
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15607616|ref|NP_214989.1|  iron-regulated heparin binding hema...   379    2e-103
gi|253797403|ref|YP_003030404.1|  iron-regulated heparin binding ...   378    2e-103
gi|3309266|gb|AAC26052.1|  heparin-binding hemagglutinin [Mycobac...   375    3e-102
gi|15839865|ref|NP_334902.1|  hypothetical protein MT0493 [Mycoba...   374    3e-102
gi|339293525|gb|AEJ45636.1|  iron-regulated heparin binding hemag...   287    8e-76 
gi|254549423|ref|ZP_05139870.1|  iron-regulated heparin binding h...   284    5e-75 
gi|118619638|ref|YP_907970.1|  iron-regulated heparin binding hem...   250    6e-65 
gi|183980824|ref|YP_001849115.1|  iron-regulated heparin binding ...   250    9e-65 
gi|254819803|ref|ZP_05224804.1|  hypothetical protein MintA_07759...   249    1e-64 
gi|254777112|ref|ZP_05218628.1|  hypothetical protein MaviaA2_209...   248    3e-64 
gi|240169858|ref|ZP_04748517.1|  iron-regulated heparin binding h...   246    1e-63 
gi|41410066|ref|NP_962902.1|  hypothetical protein MAP3968 [Mycob...   243    8e-63 
gi|33327135|gb|AAQ08948.1|  heparin-binding hemagglutinin adhesin...   243    1e-62 
gi|296168077|ref|ZP_06850143.1|  heparin-binding hemagglutinin [M...   241    4e-62 
gi|118463469|ref|YP_883803.1|  heparin binding hemagglutinin hbha...   241    5e-62 
gi|342859023|ref|ZP_08715677.1|  hypothetical protein MCOL_09103 ...   240    7e-62 
gi|333989103|ref|YP_004521717.1|  iron-regulated heparin binding ...   237    8e-61 
gi|336460416|gb|EGO39314.1|  hypothetical protein MAPs_40800 [Myc...   235    3e-60 
gi|15828329|ref|NP_302592.1|  hemagglutinin [Mycobacterium leprae...   234    6e-60 
gi|120401823|ref|YP_951652.1|  hypothetical protein Mvan_0808 [My...   229    1e-58 
gi|108797623|ref|YP_637820.1|  hypothetical protein Mmcs_0643 [My...   229    2e-58 
gi|145220706|ref|YP_001131384.1|  hypothetical protein Mflv_0100 ...   220    8e-56 
gi|118468465|ref|YP_885322.1|  heparin-binding hemagglutinin [Myc...   214    5e-54 
gi|169631161|ref|YP_001704810.1|  Heparin-binding hemagglutinin [...   143    1e-32 
gi|312141148|ref|YP_004008484.1|  hypothetical protein REQ_38170 ...   140    7e-32 
gi|229490214|ref|ZP_04384061.1|  heparin-binding hemagglutinin [R...   140    1e-31 
gi|226305078|ref|YP_002765036.1|  heparin-binding hemagglutinin [...   139    3e-31 
gi|226361237|ref|YP_002779015.1|  heparin-binding hemagglutinin [...   130    8e-29 
gi|111019097|ref|YP_702069.1|  hypothetical protein RHA1_ro02104 ...   130    1e-28 
gi|343925746|ref|ZP_08765261.1|  putative heparin-binding hemaggl...   130    1e-28 
gi|302030861|gb|ADK91819.1|  TadA [Rhodococcus opacus PD630]           130    2e-28 
gi|326383139|ref|ZP_08204828.1|  hypothetical protein SCNU_09381 ...   124    8e-27 
gi|296141332|ref|YP_003648575.1|  hypothetical protein Tpau_3658 ...   120    1e-25 
gi|262200766|ref|YP_003271974.1|  hypothetical protein Gbro_0765 ...   118    5e-25 
gi|296393893|ref|YP_003658777.1|  heparin-binding hemagglutinin [...   112    3e-23 
gi|317508729|ref|ZP_07966382.1|  hypothetical protein HMPREF9336_...   111    8e-23 
gi|262200775|ref|YP_003271983.1|  hypothetical protein Gbro_0774 ...  97.4    1e-18 
gi|319948666|ref|ZP_08022788.1|  hypothetical protein ES5_04758 [...  94.7    7e-18 
gi|54027182|ref|YP_121424.1|  putative heparin-binding hemaggluti...  85.5    4e-15 
gi|343925753|ref|ZP_08765268.1|  putative heparin-binding hemaggl...  84.0    1e-14 
gi|324997739|ref|ZP_08118851.1|  membrane spanning protein [Pseud...  83.2    2e-14 
gi|331694467|ref|YP_004330706.1|  membrane protein [Pseudonocardi...  82.4    3e-14 
gi|333918283|ref|YP_004491864.1|  Heparin-binding hemagglutinin [...  80.5    1e-13 
gi|302523790|ref|ZP_07276132.1|  predicted protein [Streptomyces ...  72.8    3e-11 
gi|300782360|ref|YP_003762651.1|  membrane spanning protein [Amyc...  66.2    2e-09 
gi|256380756|ref|YP_003104416.1|  hypothetical protein Amir_6773 ...  63.5    2e-08 
gi|134103415|ref|YP_001109076.1|  membrane spanning protein [Sacc...  55.8    3e-06 
gi|257054326|ref|YP_003132158.1|  hypothetical protein Svir_02490...  52.4    4e-05 
gi|258651085|ref|YP_003200241.1|  hypothetical protein Namu_0841 ...  40.0    0.17  
gi|326332011|ref|ZP_08198296.1|  putative LigA [Nocardioidaceae b...  38.9    0.44  


>gi|15607616|ref|NP_214989.1| iron-regulated heparin binding hemagglutinin hbhA (adhesin) [Mycobacterium 
tuberculosis H37Rv]
 gi|31791655|ref|NP_854148.1| heparin binding hemagglutinin HBHA (adhesin) [Mycobacterium bovis 
AF2122/97]
 gi|121636391|ref|YP_976614.1| Heparin binding hemagglutinin hbhA [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 66 more sequence titles
 Length=199

 Score =  379 bits (972),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 199/199 (100%), Positives = 199/199 (100%), Gaps = 0/199 (0%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60
            MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL
Sbjct  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60

Query  61   QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA  120
            QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA
Sbjct  61   QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA  120

Query  121  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK  180
            RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK
Sbjct  121  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK  180

Query  181  AAAKKAPAKKAAAKKVTQK  199
            AAAKKAPAKKAAAKKVTQK
Sbjct  181  AAAKKAPAKKAAAKKVTQK  199


>gi|253797403|ref|YP_003030404.1| iron-regulated heparin binding hemagglutinin hbhA [Mycobacterium 
tuberculosis KZN 1435]
 gi|254230823|ref|ZP_04924150.1| iron-regulated heparin binding hemagglutinin hbhA (adhesin) [Mycobacterium 
tuberculosis C]
 gi|308370416|ref|ZP_07421433.2| iron-regulated heparin binding hemagglutinin hbhA [Mycobacterium 
tuberculosis SUMu003]
 11 more sequence titles
 Length=204

 Score =  378 bits (971),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 199/199 (100%), Positives = 199/199 (100%), Gaps = 0/199 (0%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60
            MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL
Sbjct  6    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  65

Query  61   QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA  120
            QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA
Sbjct  66   QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA  125

Query  121  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK  180
            RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK
Sbjct  126  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK  185

Query  181  AAAKKAPAKKAAAKKVTQK  199
            AAAKKAPAKKAAAKKVTQK
Sbjct  186  AAAKKAPAKKAAAKKVTQK  204


>gi|3309266|gb|AAC26052.1| heparin-binding hemagglutinin [Mycobacterium tuberculosis]
Length=199

 Score =  375 bits (962),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 198/199 (99%), Positives = 198/199 (99%), Gaps = 0/199 (0%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60
            MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL
Sbjct  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60

Query  61   QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA  120
            QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA
Sbjct  61   QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA  120

Query  121  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK  180
             AEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK
Sbjct  121  PAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK  180

Query  181  AAAKKAPAKKAAAKKVTQK  199
            AAAKKAPAKKAAAKKVTQK
Sbjct  181  AAAKKAPAKKAAAKKVTQK  199


>gi|15839865|ref|NP_334902.1| hypothetical protein MT0493 [Mycobacterium tuberculosis CDC1551]
 gi|13880000|gb|AAK44716.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length=204

 Score =  374 bits (961),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 198/199 (99%), Positives = 198/199 (99%), Gaps = 0/199 (0%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60
            MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL
Sbjct  6    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  65

Query  61   QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA  120
            QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA
Sbjct  66   QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA  125

Query  121  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK  180
            RAE YVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK
Sbjct  126  RAEXYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKK  185

Query  181  AAAKKAPAKKAAAKKVTQK  199
            AAAKKAPAKKAAAKKVTQK
Sbjct  186  AAAKKAPAKKAAAKKVTQK  204


>gi|339293525|gb|AEJ45636.1| iron-regulated heparin binding hemagglutinin hbhA [Mycobacterium 
tuberculosis CCDC5079]
Length=164

 Score =  287 bits (734),  Expect = 8e-76, Method: Compositional matrix adjust.
 Identities = 153/153 (100%), Positives = 153/153 (100%), Gaps = 0/153 (0%)

Query  47   RSRVEESRARLTKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAAL  106
            RSRVEESRARLTKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAAL
Sbjct  12   RSRVEESRARLTKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAAL  71

Query  107  ERLRSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPA  166
            ERLRSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPA
Sbjct  72   ERLRSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPA  131

Query  167  KKAAPAKKAAPAKKAAAKKAPAKKAAAKKVTQK  199
            KKAAPAKKAAPAKKAAAKKAPAKKAAAKKVTQK
Sbjct  132  KKAAPAKKAAPAKKAAAKKAPAKKAAAKKVTQK  164


>gi|254549423|ref|ZP_05139870.1| iron-regulated heparin binding hemagglutinin hbhA [Mycobacterium 
tuberculosis '98-R604 INH-RIF-EM']
Length=200

 Score =  284 bits (727),  Expect = 5e-75, Method: Compositional matrix adjust.
 Identities = 149/159 (94%), Positives = 149/159 (94%), Gaps = 0/159 (0%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60
            MAENSN DDIKAPLL  L       ATVNELITNLRERAEETRTDTRSRVEESRARLTKL
Sbjct  2    MAENSNNDDIKAPLLPRLERPTWPWATVNELITNLRERAEETRTDTRSRVEESRARLTKL  61

Query  61   QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA  120
            QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA
Sbjct  62   QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA  121

Query  121  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIEL  159
            RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIEL
Sbjct  122  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIEL  160


>gi|118619638|ref|YP_907970.1| iron-regulated heparin binding hemagglutinin HbhA [Mycobacterium 
ulcerans Agy99]
 gi|118571748|gb|ABL06499.1| iron-regulated heparin binding hemagglutinin HbhA [Mycobacterium 
ulcerans Agy99]
Length=206

 Score =  250 bits (639),  Expect = 6e-65, Method: Compositional matrix adjust.
 Identities = 143/162 (89%), Positives = 156/162 (97%), Gaps = 0/162 (0%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60
            MAEN+NI+D+ APLLAALGAADLALATVN+LI NLR+RAEETRTDTRSRVEESRARLTKL
Sbjct  6    MAENTNIEDLWAPLLAALGAADLALATVNDLIANLRDRAEETRTDTRSRVEESRARLTKL  65

Query  61   QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA  120
            QEDLPEQ TELRE+FT++ELRKAAEGYLEAAT RYN+LV+RGEAALERLRSQ +FE+ SA
Sbjct  66   QEDLPEQFTELRERFTSDELRKAAEGYLEAATGRYNDLVQRGEAALERLRSQPAFEDASA  125

Query  121  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKK  162
            RAEGYVDQAVELTQEALGTVA+QTRAVGERAAKLVGIELPKK
Sbjct  126  RAEGYVDQAVELTQEALGTVATQTRAVGERAAKLVGIELPKK  167


>gi|183980824|ref|YP_001849115.1| iron-regulated heparin binding hemagglutinin HbhA [Mycobacterium 
marinum M]
 gi|183174150|gb|ACC39260.1| iron-regulated heparin binding hemagglutinin HbhA [Mycobacterium 
marinum M]
Length=201

 Score =  250 bits (638),  Expect = 9e-65, Method: Compositional matrix adjust.
 Identities = 143/162 (89%), Positives = 157/162 (97%), Gaps = 0/162 (0%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60
            MAEN+NI+D++APLLAALGAADLALATVN+LI NLR+RAEETRTDTRSRVEESRARLTKL
Sbjct  1    MAENTNIEDLRAPLLAALGAADLALATVNDLIANLRDRAEETRTDTRSRVEESRARLTKL  60

Query  61   QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA  120
            QEDLPEQ TELRE+FT++ELRKAAEGYLEAAT RYN+LV+RGEAALERLRSQ +FE+ SA
Sbjct  61   QEDLPEQFTELRERFTSDELRKAAEGYLEAATGRYNDLVQRGEAALERLRSQPAFEDASA  120

Query  121  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKK  162
            RAEGYVDQAVELTQEALGTVA+QTRAVGERAAKLVGIELPKK
Sbjct  121  RAEGYVDQAVELTQEALGTVATQTRAVGERAAKLVGIELPKK  162


>gi|254819803|ref|ZP_05224804.1| hypothetical protein MintA_07759 [Mycobacterium intracellulare 
ATCC 13950]
Length=215

 Score =  249 bits (637),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 148/173 (86%), Positives = 161/173 (94%), Gaps = 1/173 (0%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60
            MAENSNI+D++APLLAALGAADLALATVN+LI +LRERAEETR +TR+RVEE RARLTKL
Sbjct  11   MAENSNIEDLRAPLLAALGAADLALATVNDLIASLRERAEETRVETRTRVEERRARLTKL  70

Query  61   QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA  120
            QEDLPEQ TELR++FTA+ELRKAAEGYLEAATSRYNELVERGEAAL+RLRSQ +FE+ SA
Sbjct  71   QEDLPEQFTELRDRFTADELRKAAEGYLEAATSRYNELVERGEAALQRLRSQTAFEDASA  130

Query  121  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKA-APAKKAAPA  172
            RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP K  A AKKA  A
Sbjct  131  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPGKTEATAKKAQKA  183


>gi|254777112|ref|ZP_05218628.1| hypothetical protein MaviaA2_20934 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=205

 Score =  248 bits (634),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 145/168 (87%), Positives = 155/168 (93%), Gaps = 0/168 (0%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60
            MAEN NIDD++APLLAALGAADLALATVN+LI NLRERAEETR +TR+RVEE RARLTK 
Sbjct  1    MAENPNIDDLRAPLLAALGAADLALATVNDLIANLRERAEETRAETRTRVEERRARLTKF  60

Query  61   QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA  120
            QEDLPEQ TELR+KFT EELRKAAEGYLEAAT+RYNELVERGEAAL+RLRSQ +FE+ SA
Sbjct  61   QEDLPEQFTELRDKFTTEELRKAAEGYLEAATNRYNELVERGEAALQRLRSQTAFEDASA  120

Query  121  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKAAPAKK  168
            RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP KA  A K
Sbjct  121  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPGKAEAAGK  168


>gi|240169858|ref|ZP_04748517.1| iron-regulated heparin binding hemagglutinin HbhA [Mycobacterium 
kansasii ATCC 12478]
Length=209

 Score =  246 bits (629),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 146/167 (88%), Positives = 157/167 (95%), Gaps = 4/167 (2%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVE----ESRAR  56
            MAEN NI+D++APLLAALGAADLALATVN+LI NLRERAEETRTDTR+RVE    ESRAR
Sbjct  6    MAENPNIEDLRAPLLAALGAADLALATVNDLIANLRERAEETRTDTRTRVEARVEESRAR  65

Query  57   LTKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFE  116
            LTKLQEDLPEQ +ELRE+FTAEELRKAAEGYL+AAT+RYNELV+RGEAALERLRSQ  FE
Sbjct  66   LTKLQEDLPEQFSELRERFTAEELRKAAEGYLDAATNRYNELVQRGEAALERLRSQPVFE  125

Query  117  EVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKA  163
            + SARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKA
Sbjct  126  DASARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKA  172


>gi|41410066|ref|NP_962902.1| hypothetical protein MAP3968 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41398899|gb|AAS06518.1| hypothetical protein MAP_3968 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=195

 Score =  243 bits (621),  Expect = 8e-63, Method: Compositional matrix adjust.
 Identities = 141/160 (89%), Positives = 151/160 (95%), Gaps = 0/160 (0%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60
            MAEN NIDD++APLLAALGAADLALATVN+LI NLRERAEETR +TR+RVEE RARLTK 
Sbjct  6    MAENPNIDDLRAPLLAALGAADLALATVNDLIANLRERAEETRAETRTRVEERRARLTKF  65

Query  61   QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA  120
            QEDLPEQ TELR+KFT EELRKAAEGYLEAAT+RYNELVERGEAAL+RLRSQ +FE+ SA
Sbjct  66   QEDLPEQFTELRDKFTTEELRKAAEGYLEAATNRYNELVERGEAALQRLRSQTAFEDASA  125

Query  121  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP  160
            RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP
Sbjct  126  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP  165


>gi|33327135|gb|AAQ08948.1| heparin-binding hemagglutinin adhesin-like protein [Mycobacterium 
avium subsp. paratuberculosis]
Length=190

 Score =  243 bits (620),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 141/160 (89%), Positives = 151/160 (95%), Gaps = 0/160 (0%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60
            MAEN NIDD++APLLAALGAADLALATVN+LI NLRERAEETR +TR+RVEE RARLTK 
Sbjct  1    MAENPNIDDLRAPLLAALGAADLALATVNDLIANLRERAEETRAETRTRVEERRARLTKF  60

Query  61   QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA  120
            QEDLPEQ TELR+KFT EELRKAAEGYLEAAT+RYNELVERGEAAL+RLRSQ +FE+ SA
Sbjct  61   QEDLPEQFTELRDKFTTEELRKAAEGYLEAATNRYNELVERGEAALQRLRSQTAFEDASA  120

Query  121  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP  160
            RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP
Sbjct  121  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP  160


>gi|296168077|ref|ZP_06850143.1| heparin-binding hemagglutinin [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295896884|gb|EFG76512.1| heparin-binding hemagglutinin [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=206

 Score =  241 bits (615),  Expect = 4e-62, Method: Compositional matrix adjust.
 Identities = 138/163 (85%), Positives = 154/163 (95%), Gaps = 0/163 (0%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60
            MA+N+NI+D++APLLAALGAADLALATVN+LI  LRERAEETR DTR+RVEESRARLT+L
Sbjct  6    MADNTNIEDLRAPLLAALGAADLALATVNDLIAGLRERAEETRADTRTRVEESRARLTRL  65

Query  61   QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA  120
            QEDLPEQ  ELRE+FT+EELRKAAEGYL+AAT+RYNELVERGEAAL+RLRSQ   ++ SA
Sbjct  66   QEDLPEQFDELRERFTSEELRKAAEGYLDAATNRYNELVERGEAALQRLRSQTGLDDASA  125

Query  121  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKA  163
            RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKK+
Sbjct  126  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKS  168


>gi|118463469|ref|YP_883803.1| heparin binding hemagglutinin hbha [Mycobacterium avium 104]
 gi|118164756|gb|ABK65653.1| heparin binding hemagglutinin hbha [Mycobacterium avium 104]
Length=205

 Score =  241 bits (614),  Expect = 5e-62, Method: Compositional matrix adjust.
 Identities = 140/160 (88%), Positives = 150/160 (94%), Gaps = 0/160 (0%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60
            MAEN NIDD++APLLAALGAADLALATVN+LI NLRERAEETR +TR+RV E RARLTK 
Sbjct  1    MAENPNIDDLRAPLLAALGAADLALATVNDLIANLRERAEETRAETRTRVGERRARLTKF  60

Query  61   QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA  120
            QEDLPEQ TELR+KFT EELRKAAEGYLEAAT+RYNELVERGEAAL+RLRSQ +FE+ SA
Sbjct  61   QEDLPEQFTELRDKFTTEELRKAAEGYLEAATNRYNELVERGEAALQRLRSQTAFEDASA  120

Query  121  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP  160
            RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP
Sbjct  121  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP  160


>gi|342859023|ref|ZP_08715677.1| hypothetical protein MCOL_09103 [Mycobacterium colombiense CECT 
3035]
 gi|342133264|gb|EGT86467.1| hypothetical protein MCOL_09103 [Mycobacterium colombiense CECT 
3035]
Length=206

 Score =  240 bits (613),  Expect = 7e-62, Method: Compositional matrix adjust.
 Identities = 139/162 (86%), Positives = 153/162 (95%), Gaps = 0/162 (0%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60
            MAEN+NI+D++APLLAALGAADLALATVN+LI  LRERAEETR +TR+RVEE RARLTKL
Sbjct  6    MAENTNIEDLRAPLLAALGAADLALATVNDLIAGLRERAEETRAETRTRVEERRARLTKL  65

Query  61   QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA  120
            QEDLPEQ TELR++FT EELRKAAEGYLEAAT+RYNELVERGEAAL+RLR+Q +FE+ SA
Sbjct  66   QEDLPEQFTELRDRFTTEELRKAAEGYLEAATTRYNELVERGEAALQRLRNQTAFEDASA  125

Query  121  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKK  162
            RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP K
Sbjct  126  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPGK  167


>gi|333989103|ref|YP_004521717.1| iron-regulated heparin binding hemagglutinin HbhA [Mycobacterium 
sp. JDM601]
 gi|333485071|gb|AEF34463.1| iron-regulated heparin binding hemagglutinin HbhA [Mycobacterium 
sp. JDM601]
Length=206

 Score =  237 bits (604),  Expect = 8e-61, Method: Compositional matrix adjust.
 Identities = 120/162 (75%), Positives = 139/162 (86%), Gaps = 0/162 (0%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60
            MAEN NID++KAPLLAA+GAADLALATV +L+  LRERA E R D  +RVEESRARLTKL
Sbjct  1    MAENPNIDELKAPLLAAIGAADLALATVTDLVATLRERAGEAREDATTRVEESRARLTKL  60

Query  61   QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA  120
            QE+LPEQ  ELRE+FTA+ELR+AAEGY EAA+ RY++LV RGEAAL RLR+Q   ++ SA
Sbjct  61   QEELPEQFAELRERFTADELRRAAEGYAEAASGRYSDLVARGEAALVRLRNQSGLDDASA  120

Query  121  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKK  162
            + EGYVDQAVELTQE LG VA+QTR VGERAAKLVGIELP+K
Sbjct  121  QVEGYVDQAVELTQEVLGNVATQTREVGERAAKLVGIELPQK  162


>gi|336460416|gb|EGO39314.1| hypothetical protein MAPs_40800 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=205

 Score =  235 bits (600),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 140/160 (88%), Positives = 149/160 (94%), Gaps = 0/160 (0%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60
            MAEN NIDD+ APLLAALGAADLALATVN+LI NLRERAEETR +TR+RVEE RARLTK 
Sbjct  1    MAENPNIDDLPAPLLAALGAADLALATVNDLIANLRERAEETRAETRTRVEERRARLTKF  60

Query  61   QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA  120
            QEDLPEQ  ELR+KFT EELRKAAEGYLEAAT+RYNELVERGEAAL+RLRSQ +FE+ SA
Sbjct  61   QEDLPEQFIELRDKFTTEELRKAAEGYLEAATNRYNELVERGEAALQRLRSQTAFEDASA  120

Query  121  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP  160
            RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP
Sbjct  121  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP  160


>gi|15828329|ref|NP_302592.1| hemagglutinin [Mycobacterium leprae TN]
 gi|221230806|ref|YP_002504222.1| putative hemagglutinin [Mycobacterium leprae Br4923]
 gi|15214041|sp|Q9CB42.1|HBHA_MYCLE RecName: Full=Heparin-binding hemagglutinin homolog; AltName: 
Full=Adhesin
 gi|13094022|emb|CAC31971.1| possible hemagglutinin [Mycobacterium leprae]
 gi|219933913|emb|CAR72553.1| possible hemagglutinin [Mycobacterium leprae Br4923]
Length=188

 Score =  234 bits (596),  Expect = 6e-60, Method: Compositional matrix adjust.
 Identities = 137/159 (87%), Positives = 148/159 (94%), Gaps = 0/159 (0%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60
            MAEN N+DD++APLLAALGAADLAL TVNEL+ N+RERAEETR DTRSRVEESRAR+ KL
Sbjct  1    MAENPNVDDLRAPLLAALGAADLALTTVNELVGNMRERAEETRIDTRSRVEESRARVAKL  60

Query  61   QEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSA  120
            QE LPE L+ELREKFTA+ELRKAAEGYLEAAT+RYNELVERGEAALERLRS+  FE+ SA
Sbjct  61   QEVLPEHLSELREKFTADELRKAAEGYLEAATNRYNELVERGEAALERLRSRPVFEDASA  120

Query  121  RAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIEL  159
            RAEGYVDQAVELTQEALGTVASQTRAVG RAAKLVGIEL
Sbjct  121  RAEGYVDQAVELTQEALGTVASQTRAVGGRAAKLVGIEL  159


>gi|120401823|ref|YP_951652.1| hypothetical protein Mvan_0808 [Mycobacterium vanbaalenii PYR-1]
 gi|119954641|gb|ABM11646.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=216

 Score =  229 bits (585),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 119/164 (73%), Positives = 138/164 (85%), Gaps = 4/164 (2%)

Query  1    MAENS----NIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRAR  56
            MAE +    +IDD+KAPLLAA+GAADLAL  VNE++  LRERA E RTD++SRVEESRAR
Sbjct  1    MAETNKNQLDIDDLKAPLLAAVGAADLALERVNEIVATLRERAGEARTDSKSRVEESRAR  60

Query  57   LTKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFE  116
            +TKLQEDLP Q  ++REK TAEELRK AEGY EAA S YN+L+ERGEAA+ERLR+Q + E
Sbjct  61   ITKLQEDLPAQFGDIREKLTAEELRKFAEGYAEAAQSTYNKLIERGEAAIERLRTQPALE  120

Query  117  EVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELP  160
            E ++R E Y DQAVELTQEALG VASQTRAVGERAAKLVG+ELP
Sbjct  121  EAASRVEEYTDQAVELTQEALGNVASQTRAVGERAAKLVGVELP  164


>gi|108797623|ref|YP_637820.1| hypothetical protein Mmcs_0643 [Mycobacterium sp. MCS]
 gi|119866710|ref|YP_936662.1| hypothetical protein Mkms_0656 [Mycobacterium sp. KMS]
 gi|126433247|ref|YP_001068938.1| hypothetical protein Mjls_0636 [Mycobacterium sp. JLS]
 gi|108768042|gb|ABG06764.1| conserved hypothetical protein [Mycobacterium sp. MCS]
 gi|119692799|gb|ABL89872.1| conserved hypothetical protein [Mycobacterium sp. KMS]
 gi|126233047|gb|ABN96447.1| hypothetical protein Mjls_0636 [Mycobacterium sp. JLS]
Length=203

 Score =  229 bits (584),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 119/165 (73%), Positives = 141/165 (86%), Gaps = 3/165 (1%)

Query  1    MAENS---NIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARL  57
            MAE +   +I+D+KAPLLAA+GAADLALATVNE++ +LR+RAEE RTD  SRVEESRAR+
Sbjct  1    MAEKNPQVDIEDLKAPLLAAVGAADLALATVNEIVASLRDRAEEARTDANSRVEESRARI  60

Query  58   TKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEE  117
             KLQE+LP Q+TELRE+ TA+ELR+AAEGY EAA S Y +LVERGEAALERLRSQ  F +
Sbjct  61   NKLQEELPTQVTELRERLTADELRRAAEGYAEAAQSTYAKLVERGEAALERLRSQPGFTD  120

Query  118  VSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKK  162
             + R E Y DQAVELT++ALG VA+QTRAVGERAAKLVG+ELPKK
Sbjct  121  AANRVETYTDQAVELTEQALGNVATQTRAVGERAAKLVGVELPKK  165


>gi|145220706|ref|YP_001131384.1| hypothetical protein Mflv_0100 [Mycobacterium gilvum PYR-GCK]
 gi|315442342|ref|YP_004075221.1| hypothetical protein Mspyr1_06830 [Mycobacterium sp. Spyr1]
 gi|145213192|gb|ABP42596.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
 gi|315260645|gb|ADT97386.1| hypothetical protein Mspyr1_06830 [Mycobacterium sp. Spyr1]
Length=220

 Score =  220 bits (561),  Expect = 8e-56, Method: Compositional matrix adjust.
 Identities = 115/166 (70%), Positives = 135/166 (82%), Gaps = 3/166 (1%)

Query  1    MAENSN---IDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARL  57
            MAE  N   +DD+KAPLLAA+GAADLAL  VNE++  LRERA + RTD  +RVEESRAR+
Sbjct  1    MAEAKNQLDVDDLKAPLLAAVGAADLALERVNEIVATLRERAGDARTDAETRVEESRARV  60

Query  58   TKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEE  117
             KLQEDLP Q  +LR++ T++ELRK AEGY EAA + Y +L+ERGEAALERLRSQ + E 
Sbjct  61   AKLQEDLPNQFGDLRDRLTSDELRKFAEGYAEAAQTTYTKLIERGEAALERLRSQPALEG  120

Query  118  VSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKKA  163
             ++R E Y DQAVELTQEALG VASQTRAVGERAAKLVG+ELPKKA
Sbjct  121  AASRVEEYTDQAVELTQEALGNVASQTRAVGERAAKLVGVELPKKA  166


>gi|118468465|ref|YP_885322.1| heparin-binding hemagglutinin [Mycobacterium smegmatis str. MC2 
155]
 gi|68525472|gb|AAY98786.1| HBHA-like protein [Mycobacterium smegmatis str. MC2 155]
 gi|118169752|gb|ABK70648.1| heparin-binding hemagglutinin [Mycobacterium smegmatis str. MC2 
155]
Length=232

 Score =  214 bits (545),  Expect = 5e-54, Method: Compositional matrix adjust.
 Identities = 115/166 (70%), Positives = 133/166 (81%), Gaps = 9/166 (5%)

Query  6    NIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQEDLP  65
             ++++KAPLLAA+GAADLALATVNE+I  L ERA E R+D  +RVEESRARLTKLQE+LP
Sbjct  8    TVEELKAPLLAAVGAADLALATVNEIIATLLERAGEARSDAEARVEESRARLTKLQEELP  67

Query  66   EQLTELREKFTA---------EELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFE  116
             Q  ELREK  +         EELRKAAE Y + AT+ YN+LVERGEAALERLR+Q + E
Sbjct  68   SQFGELREKLNSDELRKKLNSEELRKAAESYADQATATYNKLVERGEAALERLRNQPALE  127

Query  117  EVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPKK  162
            E + R E Y DQAVELTQEALGTVASQTRAVGERAAKLVG+ELPK+
Sbjct  128  EAATRVETYTDQAVELTQEALGTVASQTRAVGERAAKLVGVELPKR  173


>gi|169631161|ref|YP_001704810.1| Heparin-binding hemagglutinin [Mycobacterium abscessus ATCC 19977]
 gi|169243128|emb|CAM64156.1| Heparin-binding hemagglutinin (adhesin) [Mycobacterium abscessus]
Length=216

 Score =  143 bits (361),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 92/156 (59%), Positives = 114/156 (74%), Gaps = 0/156 (0%)

Query  4    NSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQED  63
            N++ DD+K P   A+GA DLALA V +++  LRERAEE  ++  +RV+E+R RL +L  +
Sbjct  5    NTSFDDLKTPFYVAVGAGDLALAAVADVVVKLRERAEEAASEAGARVDETRDRLRELSAE  64

Query  64   LPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSARAE  123
            LP  + ELR++FT EELRK AE YL+ AT  YN L ERGE A+ERLRS    EE   RAE
Sbjct  65   LPTDVNELRDRFTPEELRKVAEAYLQVATDIYNNLAERGEEAIERLRSTPGIEENVTRAE  124

Query  124  GYVDQAVELTQEALGTVASQTRAVGERAAKLVGIEL  159
            G V    ELT++ALGTVASQTRAVGERAAKLVGI+L
Sbjct  125  GLVGNYAELTEQALGTVASQTRAVGERAAKLVGIDL  160


>gi|312141148|ref|YP_004008484.1| hypothetical protein REQ_38170 [Rhodococcus equi 103S]
 gi|325674030|ref|ZP_08153720.1| heparin-binding hemagglutinin [Rhodococcus equi ATCC 33707]
 gi|311890487|emb|CBH49805.1| conserved hypothetical protein [Rhodococcus equi 103S]
 gi|325555295|gb|EGD24967.1| heparin-binding hemagglutinin [Rhodococcus equi ATCC 33707]
Length=285

 Score =  140 bits (354),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 81/174 (47%), Positives = 106/174 (61%), Gaps = 18/174 (10%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRAR----  56
            M +   +++IK P  AA+G  DL +  V ++++ +R RAE T TD   R++E+R R    
Sbjct  1    MTDPKIVENIKTPFYAAVGTGDLVVQAVADVVSQVRARAENTNTDVSGRIDEARERWANL  60

Query  57   --------------LTKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERG  102
                          L  L  +LPE+L ELRE+FT EELRK AE YL+ A+  Y  L ERG
Sbjct  61   PTEVSEGVEQLRERLAALPSELPEELAELRERFTPEELRKVAEAYLKVASDLYVALAERG  120

Query  103  EAALERLRSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVG  156
            E A+ER+R Q + EE   RAE     AVELT+EALGTVA QTR +GE+AAKL G
Sbjct  121  EEAVERIRKQPAVEEQLGRAEAVFGDAVELTEEALGTVARQTRELGEQAAKLAG  174


>gi|229490214|ref|ZP_04384061.1| heparin-binding hemagglutinin [Rhodococcus erythropolis SK121]
 gi|229322962|gb|EEN88736.1| heparin-binding hemagglutinin [Rhodococcus erythropolis SK121]
Length=275

 Score =  140 bits (352),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 85/174 (49%), Positives = 109/174 (63%), Gaps = 18/174 (10%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60
            M + + ID +K  L AA+GA DL +  V +++  +RERAE T+ D   RV+ +R +L  +
Sbjct  1    MTDKNAIDSVKTSLYAAVGAGDLVVQAVADVVAQVRERAENTQGDVNGRVDGAREKLASV  60

Query  61   QED------------------LPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERG  102
            Q D                  LPE+L ELREKF+ EELRK AE YL+ A   YN L ERG
Sbjct  61   QGDVAESVDALRERLAGLPSELPEELAELREKFSPEELRKVAEAYLKVAGDLYNSLAERG  120

Query  103  EAALERLRSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVG  156
            E A+ER+R Q + EE  A AE  +  AVELT++ALGTVA QTRAVGE+AAKL G
Sbjct  121  EDAVERIRKQPAVEEGIAAAESALGDAVELTEDALGTVARQTRAVGEQAAKLAG  174


>gi|226305078|ref|YP_002765036.1| heparin-binding hemagglutinin [Rhodococcus erythropolis PR4]
 gi|226184193|dbj|BAH32297.1| putative heparin-binding hemagglutinin [Rhodococcus erythropolis 
PR4]
Length=275

 Score =  139 bits (350),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 85/174 (49%), Positives = 108/174 (63%), Gaps = 18/174 (10%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60
            M + + ID +K  L AA+GA DL +  V +++  +RERAE T+ D   RV+ +R +L  +
Sbjct  1    MTDKNAIDSVKTSLYAAVGAGDLVVQAVADVVAQVRERAENTQGDVNGRVDGAREKLASV  60

Query  61   QED------------------LPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERG  102
            Q D                  LPE+L ELREKF  EELRK AE YL+ A   YN L ERG
Sbjct  61   QGDVAESVEALRERLAGLPSELPEELAELREKFAPEELRKVAEAYLKVAGDLYNSLAERG  120

Query  103  EAALERLRSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVG  156
            E A+ER+R Q + EE  A AE  +  AVELT++ALGTVA QTRAVGE+AAKL G
Sbjct  121  EDAVERIRKQPAVEEGIAAAESALGDAVELTEDALGTVARQTRAVGEQAAKLAG  174


>gi|226361237|ref|YP_002779015.1| heparin-binding hemagglutinin [Rhodococcus opacus B4]
 gi|226239722|dbj|BAH50070.1| putative heparin-binding hemagglutinin [Rhodococcus opacus B4]
Length=274

 Score =  130 bits (328),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 83/175 (48%), Positives = 105/175 (60%), Gaps = 18/175 (10%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60
            M +   ID +K  L AA+GA D+ +  V +++  +R RAE T+ D   RV  ++ R   L
Sbjct  1    MTDQKTIDSVKTSLYAAVGAGDVVVQAVADVVAQVRSRAESTQGDVEERVGGAKERFAGL  60

Query  61   QED------------------LPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERG  102
            QE+                  LPE+L ELREKFTA+ELRK AE YL+ A+  Y  L ERG
Sbjct  61   QEEVTEGVENLRDRLAGLPSELPEELAELREKFTADELRKVAEAYLKVASDLYTSLAERG  120

Query  103  EAALERLRSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGI  157
            E  +ER+R Q   EE   RAE     AVELT+EALGTVA QTRAVGE+AAKL G+
Sbjct  121  EDTVERIRKQPVVEEGIGRAETAFGDAVELTEEALGTVARQTRAVGEQAAKLAGL  175


>gi|111019097|ref|YP_702069.1| hypothetical protein RHA1_ro02104 [Rhodococcus jostii RHA1]
 gi|110818627|gb|ABG93911.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=276

 Score =  130 bits (327),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 83/174 (48%), Positives = 105/174 (61%), Gaps = 18/174 (10%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60
            M +   ID +K  L AA+GA D+ +  V +++  +R RAE T+ D   RV  ++ R+  L
Sbjct  1    MTDQKTIDSVKTSLYAAVGAGDVVVQAVADVVAQVRSRAESTQGDVEERVGGAKERIAGL  60

Query  61   QED------------------LPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERG  102
            QE+                  LPE+L ELREKFTA+ELRK AE YL+ A+  Y  L ERG
Sbjct  61   QEEVTEGVENLRDRLAGLPSELPEELAELREKFTADELRKVAEAYLKVASDLYTSLAERG  120

Query  103  EAALERLRSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVG  156
            E  +ER+R Q   EE   RAE     AVELT+EALGTVA QTRAVGE+AAKL G
Sbjct  121  EDTVERIRKQPVVEEGIGRAETAFGDAVELTEEALGTVARQTRAVGEQAAKLAG  174


>gi|343925746|ref|ZP_08765261.1| putative heparin-binding hemagglutinin [Gordonia alkanivorans 
NBRC 16433]
 gi|343764097|dbj|GAA12187.1| putative heparin-binding hemagglutinin [Gordonia alkanivorans 
NBRC 16433]
Length=260

 Score =  130 bits (326),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 77/167 (47%), Positives = 102/167 (62%), Gaps = 22/167 (13%)

Query  12   APLLAALGAADLALATVNELITNLRERAE------ETRTDTR----------------SR  49
            APL AA+GA D A   V E +T LRER E      +TR + R                SR
Sbjct  8    APLYAAVGAGDYAFTQVTEKLTELRERTEAAAETAQTRLEARYTETKALITDLPETAQSR  67

Query  50   VEESRARLTKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERL  109
             +E++ R+  L E++P ++ ELR K TA+EL+K A+ Y+E AT  YN L ERGEA LERL
Sbjct  68   FDEAKTRIESLSEEVPTEIDELRGKLTADELKKLADPYVEKATDFYNTLAERGEATLERL  127

Query  110  RSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVG  156
            R +   +E  +R E   + AV++T++ALG V+SQTR VGERAAKL G
Sbjct  128  RKKPVVQENLSRVEKVYNDAVDITEDALGVVSSQTRLVGERAAKLAG  174


>gi|302030861|gb|ADK91819.1| TadA [Rhodococcus opacus PD630]
Length=276

 Score =  130 bits (326),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 83/174 (48%), Positives = 105/174 (61%), Gaps = 18/174 (10%)

Query  1    MAENSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKL  60
            M +   ID +K  L AA+GA D+ +  V +++  +R RAE T+ D   RV  ++ R+  L
Sbjct  1    MTDQKTIDSVKTSLYAAVGAGDVVVQAVADVVAQVRSRAESTQGDVEERVGGAKERIAGL  60

Query  61   QED------------------LPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERG  102
            QE+                  LPE+L ELREKFTA+ELRK AE YL+ A+  Y  L ERG
Sbjct  61   QEEVTEGVENLRDRLAGLPSELPEELAELREKFTADELRKVAEAYLKVASDLYTSLAERG  120

Query  103  EAALERLRSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVG  156
            E  +ER+R Q   EE   RAE     AVELT+EALGTVA QTRAVGE+AAKL G
Sbjct  121  EDTVERIRKQPVVEEGIGRAETAFGDAVELTEEALGTVARQTRAVGEQAAKLAG  174


>gi|326383139|ref|ZP_08204828.1| hypothetical protein SCNU_09381 [Gordonia neofelifaecis NRRL 
B-59395]
 gi|326198275|gb|EGD55460.1| hypothetical protein SCNU_09381 [Gordonia neofelifaecis NRRL 
B-59395]
Length=230

 Score =  124 bits (311),  Expect = 8e-27, Method: Compositional matrix adjust.
 Identities = 69/137 (51%), Positives = 95/137 (70%), Gaps = 1/137 (0%)

Query  13   PLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQEDLPEQLTELR  72
            P+ A +GA D+A+  V + +  L+ RA+ +R  T++R++E+RARLT+L  + P  + ELR
Sbjct  11   PVYAVVGAGDVAVQEVKDALAELKTRAQASRERTQTRLDETRARLTELPTEFP-SVEELR  69

Query  73   EKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSARAEGYVDQAVEL  132
             K TA+ELRK AE Y+EA T  YN L ERGE A+ERLR     EE  AR E   + AV+L
Sbjct  70   AKLTADELRKVAEPYIEATTGLYNSLAERGEGAVERLRQTPYVEENLARVEKAYNDAVDL  129

Query  133  TQEALGTVASQTRAVGE  149
            T++ALG V++QTRAVGE
Sbjct  130  TEDALGAVSTQTRAVGE  146


>gi|296141332|ref|YP_003648575.1| hypothetical protein Tpau_3658 [Tsukamurella paurometabola DSM 
20162]
 gi|296029466|gb|ADG80236.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 
20162]
Length=180

 Score =  120 bits (301),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 69/158 (44%), Positives = 95/158 (61%), Gaps = 11/158 (6%)

Query  10   IKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRAR-----------LT  58
            +K PL A +GA D A   V+E+I  LR  A +   D  +RV E++A+           LT
Sbjct  6    LKTPLFATIGAGDYAYEAVSEVIEKLRAAATDASKDFDTRVAEAKAKVEEAAGTATAKLT  65

Query  59   KLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEV  118
              ++ LP+ + ELR +FT++ELRK A  Y++ AT  Y  L ERGE+A ERL S    E+ 
Sbjct  66   DAKDGLPKDVDELRARFTSDELRKVAAAYIQVATDIYESLAERGESAFERLTSGSIVEDA  125

Query  119  SARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVG  156
            + +A    +QAVELT+ +LG VA   + VGERAAKLVG
Sbjct  126  TGQATKAYNQAVELTESSLGQVADAAKQVGERAAKLVG  163


>gi|262200766|ref|YP_003271974.1| hypothetical protein Gbro_0765 [Gordonia bronchialis DSM 43247]
 gi|262084113|gb|ACY20081.1| hypothetical protein Gbro_0765 [Gordonia bronchialis DSM 43247]
Length=229

 Score =  118 bits (296),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 70/148 (48%), Positives = 98/148 (67%), Gaps = 5/148 (3%)

Query  13   PLLAALGAADLALATVNELITNLRER----AEETRTDTRSRVEESRARLTKLQEDLPEQL  68
            PL  A+GA D A   V + +T +RER    AE+ +    +R EE++ R+  L E++P  +
Sbjct  11   PLYVAVGAGDYAYQQVTDKLTEIRERTETAAEKAQARLEARFEETKTRVEALPEEVP-SV  69

Query  69   TELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSARAEGYVDQ  128
             ELR K T +ELRK A+ Y++ AT  YN L ERGEAA+E+LR++   +E   RAE   + 
Sbjct  70   EELRAKLTVDELRKIADPYVDKATEFYNSLAERGEAAVEKLRTRPVVQENLTRAEKAYND  129

Query  129  AVELTQEALGTVASQTRAVGERAAKLVG  156
            AV+LT++ALG V+SQTR VG+RAAKL G
Sbjct  130  AVDLTEDALGVVSSQTRLVGDRAAKLTG  157


>gi|296393893|ref|YP_003658777.1| heparin-binding hemagglutinin [Segniliparus rotundus DSM 44985]
 gi|296181040|gb|ADG97946.1| heparin-binding hemagglutinin (adhesin) [Segniliparus rotundus 
DSM 44985]
Length=179

 Score =  112 bits (279),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 71/158 (45%), Positives = 100/158 (64%), Gaps = 6/158 (3%)

Query  1    MAEN---SNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRAR-  56
            MAE    SN+D IKAP  AA+G  DLALA V++++  +RE AE+  ++ R++V+E+R + 
Sbjct  1    MAEQKTASNLD-IKAPFYAAVGFGDLALAAVSDIVEKIRETAEDAASEVRAKVDEARDKH  59

Query  57   LTKLQEDLPE-QLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSF  115
            L K  E + +  + ++  KF+ EELRK AE Y + A   ++ L ERGE A +RL      
Sbjct  60   LPKKAEKIEQSDIKDILTKFSPEELRKVAEAYSKVALDIFSHLAERGEEATKRLLKSGEV  119

Query  116  EEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAK  153
            ++V        DQA ELT EALG VAS TRA+GERA+K
Sbjct  120  QDVKNAVANKADQARELTDEALGKVASGTRALGERASK  157


>gi|317508729|ref|ZP_07966382.1| hypothetical protein HMPREF9336_02754 [Segniliparus rugosus ATCC 
BAA-974]
 gi|316252977|gb|EFV12394.1| hypothetical protein HMPREF9336_02754 [Segniliparus rugosus ATCC 
BAA-974]
Length=183

 Score =  111 bits (277),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 70/170 (42%), Positives = 102/170 (60%), Gaps = 4/170 (2%)

Query  9    DIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQEDLPEQL  68
            DIKAP  AA+G  D ALA VN+++  +RE AE   ++  ++V E+R +    + +  E +
Sbjct  14   DIKAPFYAAVGVGDFALAAVNDIVEKIRETAESATSEVLAKVNEARDKHLPEKGEKAEPI  73

Query  69   TELRE---KFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSARAEGY  125
             ++R+   KF+ EELRK AE Y + A   +N L ERGE A +RL  Q   ++V       
Sbjct  74   GDIRDLVAKFSPEELRKVAEAYSKVALDIFNLLAERGEEATKRLLKQSEVQDVKKAVADK  133

Query  126  VDQAVELTQEALGTVASQTRAVGERAAKLVGI-ELPKKAAPAKKAAPAKK  174
            VD+  ELT +ALG VAS TRA+GE+A+K  G     +++A  KKA  A+K
Sbjct  134  VDEVRELTDDALGKVASGTRALGEQASKGTGTGSTTRRSAATKKADSAEK  183


>gi|262200775|ref|YP_003271983.1| hypothetical protein Gbro_0774 [Gordonia bronchialis DSM 43247]
 gi|262084122|gb|ACY20090.1| hypothetical protein Gbro_0774 [Gordonia bronchialis DSM 43247]
Length=356

 Score = 97.4 bits (241),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 68/167 (41%), Positives = 94/167 (57%), Gaps = 13/167 (7%)

Query  36   RERAEETRTDTRSRV-----------EESRARLTKLQEDLPEQLTELREKFTAEELRKAA  84
            + R  ET  +T++R+           EE+R +L+ L  ++P ++ ELR +F+ EELR  A
Sbjct  65   QSRLAETAENTQARIDDALATALALFEEARVKLSSLPIEVPAEIEELRNRFSPEELRSVA  124

Query  85   EGYLEAATSRYNELVERGEAALERLRSQQSFEEVSARAEGYVDQAVELTQEALGTVASQT  144
            E YL  A      L ERGE  +++L+SQ        + E   + AV LT +ALG V++QT
Sbjct  125  EAYLAVAAGLLTSLSERGEEVVDKLKSQPVVGSNLPKLEKVYNDAVGLTGDALGVVSAQT  184

Query  145  RAVGERAAKLVGIELPKKAAPAKKAAPAKKAAPAKKAAAKKAPAKKA  191
            R VGERAAKL G     +  PA+K+  AK  APA  A A  APAK A
Sbjct  185  RLVGERAAKLAGAADDTRELPAQKSPAAK--APATVAEAVGAPAKTA  229


>gi|319948666|ref|ZP_08022788.1| hypothetical protein ES5_04758 [Dietzia cinnamea P4]
 gi|319437648|gb|EFV92646.1| hypothetical protein ES5_04758 [Dietzia cinnamea P4]
Length=411

 Score = 94.7 bits (234),  Expect = 7e-18, Method: Compositional matrix adjust.
 Identities = 65/172 (38%), Positives = 92/172 (54%), Gaps = 26/172 (15%)

Query  10   IKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRA--------RLTKLQ  61
            ++ P+ A +GA DLA+  V+ L+ +LR RAE+  +D +SRV E  +        R+T  Q
Sbjct  38   VRTPVYAYVGANDLAIQAVSGLVNDLRRRAEDAVSDAQSRVTERVSDVQNRITERVTGAQ  97

Query  62   E----------DLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRS  111
            E           LP ++ EL  +F  EELRK A+ Y++ A   Y  L  RGE  + RLR 
Sbjct  98   ERVSEVPDRVQSLPAEVEELVNRFRPEELRKVADAYVQVAAGIYGGLAARGEDVVSRLRE  157

Query  112  QQS--------FEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLV  155
            +            E  ARA   V++  EL +EALGTVA QTR++G +AA  V
Sbjct  158  ENPQLEAGLARVNEQVARAADAVEEQRELGEEALGTVARQTRSIGVKAAGRV  209


>gi|54027182|ref|YP_121424.1| putative heparin-binding hemagglutinin [Nocardia farcinica IFM 
10152]
 gi|54018690|dbj|BAD60060.1| putative heparin-binding hemagglutinin [Nocardia farcinica IFM 
10152]
Length=221

 Score = 85.5 bits (210),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 57/149 (39%), Positives = 75/149 (51%), Gaps = 20/149 (13%)

Query  10   IKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQED------  63
            +  PLLAA+GA D       +++T +RE+A  T TD   RVEE+R R   +  D      
Sbjct  8    VTKPLLAAVGAGDAVYTAALDVVTQVREKA--TTTDVSGRVEEARERFAHVPADVQAQFE  65

Query  64   ------------LPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRS  111
                        LP++L ELREKFTAEELRK AE Y       Y++L  RGE  +ERLR+
Sbjct  66   SLRERLAGLPTELPDELAELREKFTAEELRKLAEEYYAKVLDLYSDLAVRGEETVERLRA  125

Query  112  QQSFEEVSARAEGYVDQAVELTQEALGTV  140
                E+   R E     A    +E +G V
Sbjct  126  NHLVEDQIERVESLYKDAASRAEEVVGRV  154


>gi|343925753|ref|ZP_08765268.1| putative heparin-binding hemagglutinin [Gordonia alkanivorans 
NBRC 16433]
 gi|343764104|dbj|GAA12194.1| putative heparin-binding hemagglutinin [Gordonia alkanivorans 
NBRC 16433]
Length=361

 Score = 84.0 bits (206),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 49/108 (46%), Positives = 68/108 (63%), Gaps = 0/108 (0%)

Query  50   VEESRARLTKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERL  109
             EE++++L+ L  +LP ++ ELR +F+ EELRK AE YL  A      L ER + A+ +L
Sbjct  90   FEEAKSKLSTLPVELPSEIEELRARFSPEELRKVAEAYLAVAAGLLTSLSERRDEAVGKL  149

Query  110  RSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGI  157
             SQ    E   + E     AV LT+EALGT++ QTRAVGERA +L G+
Sbjct  150  LSQPVVGENLPKLEKVYSDAVGLTEEALGTISEQTRAVGERALRLAGL  197


>gi|324997739|ref|ZP_08118851.1| membrane spanning protein [Pseudonocardia sp. P1]
Length=245

 Score = 83.2 bits (204),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 51/154 (34%), Positives = 81/154 (53%), Gaps = 22/154 (14%)

Query  11   KAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQEDLPEQLTE  70
            + PL+A +G  D A  TV++ +T++R  A +       R EE + R+    ++ PE+L E
Sbjct  29   RTPLMAVIGVGDYAYTTVSKAVTDVRTTATQ-------RAEEVQTRV----QEFPEELKE  77

Query  71   LREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSF-----------EEVS  119
            LR K +++ LRK  E +       Y    +RGE A  +LR Q              E+  
Sbjct  78   LRGKLSSDSLRKQVEEFRSEVEGVYVGFAQRGEKAWGKLRKQPQVKNAIDTVEDLTEKFD  137

Query  120  ARAEGYVDQAVELTQEALGTVASQTRAVGERAAK  153
            AR +G+VD+  +   +AL TV +QTR+VGE+ A+
Sbjct  138  ARVDGFVDETHDAAAKALDTVTTQTRSVGEKVAR  171


>gi|331694467|ref|YP_004330706.1| membrane protein [Pseudonocardia dioxanivorans CB1190]
 gi|326949156|gb|AEA22853.1| membrane spanning protein [Pseudonocardia dioxanivorans CB1190]
Length=266

 Score = 82.4 bits (202),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 60/154 (39%), Positives = 77/154 (50%), Gaps = 22/154 (14%)

Query  11   KAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQEDLPEQLTE  70
            K PLLA LGA D A+A V    T  R RAE+     R+ V + R        DLP +L  
Sbjct  30   KTPLLAVLGAGDRAVAGVTRFATEARTRAEK-----RADVVQQRVL------DLPAELDG  78

Query  71   LREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEE-----------VS  119
            LR + T +ELRKA E   E   + Y EL  RGE    R+R Q   E+           + 
Sbjct  79   LRARLTGDELRKAVEAVREQVAAYYAELAGRGEVTWGRIRKQPQVEQALSALGEYGEKLD  138

Query  120  ARAEGYVDQAVELTQEALGTVASQTRAVGERAAK  153
            AR +  VD A +  ++AL TV  QTRA GE+ A+
Sbjct  139  ARVDELVDDAHDAAEKALATVTRQTRATGEKVAR  172


>gi|333918283|ref|YP_004491864.1| Heparin-binding hemagglutinin [Amycolicicoccus subflavus DQS3-9A1]
 gi|333480504|gb|AEF39064.1| Heparin-binding hemagglutinin [Amycolicicoccus subflavus DQS3-9A1]
Length=273

 Score = 80.5 bits (197),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 57/145 (40%), Positives = 82/145 (57%), Gaps = 1/145 (0%)

Query  10   IKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQEDLPEQLT  69
            +K PL AA+GA DLA+  V   + +LR RA    TDT++R + +R  ++ L   +P  L+
Sbjct  1    MKTPLFAAVGAGDLAVEAVGGFVKDLRGRAATAATDTQARAQRTREIISSLPSQVPSDLS  60

Query  70   ELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSARAEGYVDQA  129
            ELR +   E+ RK AE YL+ A   Y EL +RGE  +E +R Q   E     A G  ++A
Sbjct  61   ELRARINGEDFRKQAESYLQNAAGAYGELAQRGEGRIESIRRQPVLEARLTEAAGATEEA  120

Query  130  V-ELTQEALGTVASQTRAVGERAAK  153
            + ELT+ +       TRAVG  AA+
Sbjct  121  IEELTRRSRFVRDFATRAVGRIAAR  145


>gi|302523790|ref|ZP_07276132.1| predicted protein [Streptomyces sp. AA4]
 gi|302432685|gb|EFL04501.1| predicted protein [Streptomyces sp. AA4]
Length=229

 Score = 72.8 bits (177),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 55/163 (34%), Positives = 83/163 (51%), Gaps = 22/163 (13%)

Query  4    NSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQED  63
            N+ +D ++ PLLAALGA +LA   V + +        + R +     E +R  L    E+
Sbjct  14   NTALDQVRTPLLAALGAGNLASQAVTDAVA-------KARANVTKNTEAARKGL----EE  62

Query  64   LPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQ----QSFEEV-  118
            LP  +  LREK    ELRKA + Y EAA   YN+L E GE A +++ +Q    ++ E++ 
Sbjct  63   LPTDVESLREKLDPAELRKAIDEYTEAALKLYNKLAESGEQAWDKIAAQPQVKKAIEQLE  122

Query  119  ------SARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLV  155
                    R EG  ++  E     L  V  +TR+ GE+AA+ V
Sbjct  123  DALTAAQERVEGLTEETRERVDGVLAKVTKRTRSAGEKAARKV  165


>gi|300782360|ref|YP_003762651.1| membrane spanning protein [Amycolatopsis mediterranei U32]
 gi|299791874|gb|ADJ42249.1| membrane spanning protein [Amycolatopsis mediterranei U32]
 gi|340523726|gb|AEK38931.1| membrane spanning protein [Amycolatopsis mediterranei S699]
Length=229

 Score = 66.2 bits (160),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 50/160 (32%), Positives = 76/160 (48%), Gaps = 22/160 (13%)

Query  7    IDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQEDLPE  66
            +D ++ PLLAALGA +LA   V + +   +E   ++    R  ++E           LP 
Sbjct  17   LDQVRTPLLAALGAGNLATHAVTDAVAKAKENVTKSGEVARKNLQE-----------LPT  65

Query  67   QLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQ-------QSFEEVS  119
             +  LREK    ELRK  + Y EAA   YN+L E GE A +++ +Q       +  EE  
Sbjct  66   DVESLREKLDPAELRKVIDEYTEAALKLYNKLAESGEQAWDKIATQPQVKKAIEQLEEAL  125

Query  120  ARAEGYVD----QAVELTQEALGTVASQTRAVGERAAKLV  155
              A+G  +    +  E     L  V  +TR+ GE+ A+ V
Sbjct  126  TTAQGQAEVVSTEVRERVDGVLAKVTKRTRSAGEKTARKV  165


>gi|256380756|ref|YP_003104416.1| hypothetical protein Amir_6773 [Actinosynnema mirum DSM 43827]
 gi|255925059|gb|ACU40570.1| hypothetical protein Amir_6773 [Actinosynnema mirum DSM 43827]
Length=194

 Score = 63.5 bits (153),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 40/107 (38%), Positives = 60/107 (57%), Gaps = 7/107 (6%)

Query  46   TRSRVEESRARLTKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAA  105
             + RVE +RA      EDLP    ELR +F A ELRK  + Y ++A   Y  L E+GE A
Sbjct  46   VKDRVESARAGA----EDLP---AELRGRFDAAELRKVVDAYTKSAVDLYQYLAEQGEHA  98

Query  106  LERLRSQQSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAA  152
            LE+L++Q   +   ++ +   D A ++  + LG V  +TR+ GE+ A
Sbjct  99   LEKLKTQPQVQRALSQVDQAADDANKIADDVLGKVTRRTRSTGEKLA  145


>gi|134103415|ref|YP_001109076.1| membrane spanning protein [Saccharopolyspora erythraea NRRL 2338]
 gi|291006045|ref|ZP_06564018.1| membrane spanning protein [Saccharopolyspora erythraea NRRL 2338]
 gi|133916038|emb|CAM06151.1| membrane spanning protein [Saccharopolyspora erythraea NRRL 2338]
Length=260

 Score = 55.8 bits (133),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 44/116 (38%), Positives = 58/116 (50%), Gaps = 12/116 (10%)

Query  43   RTDTRSRVEESRARLTKLQEDLPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERG  102
            RT+   R E +RA       DLP  L ELR +    ELRK  + Y ++A   Y+ L ERG
Sbjct  54   RTELNDRAESARA-------DLPSDLNELRGQLDPAELRKRLDAYTQSAVKLYDYLAERG  106

Query  103  EAALERLRSQ-----QSFEEVSARAEGYVDQAVELTQEALGTVASQTRAVGERAAK  153
            E ALERL+ Q     +  E    R E  V +   L  + LG V    R+ GE+AA+
Sbjct  107  EGALERLQPQVQQARKQAETAQGRVEEVVGEVRVLADDVLGKVTRGARSYGEKAAR  162


>gi|257054326|ref|YP_003132158.1| hypothetical protein Svir_02490 [Saccharomonospora viridis DSM 
43017]
 gi|256584198|gb|ACU95331.1| hypothetical protein Svir_02490 [Saccharomonospora viridis DSM 
43017]
Length=230

 Score = 52.4 bits (124),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 43/134 (33%), Positives = 63/134 (48%), Gaps = 23/134 (17%)

Query  4    NSNIDDIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQED  63
            N+  + ++  LLAALGA  LA   V E ++             ++RV  S     +  ED
Sbjct  14   NTAKEQVRTSLLAALGAGSLAGRAVVETVSK-----------AKTRVSSSSDAAKRNVED  62

Query  64   LPEQLTELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLRSQQSFEEVSARAE  123
            LP +L ELRE+    ELRK  + Y +A    Y+ L   GE         Q+++EV    E
Sbjct  63   LPSELGELRERLDPAELRKTWDEYTDAMVKLYHRLAASGE---------QTWDEV---VE  110

Query  124  GYVDQAVELTQEAL  137
              V + +E  +EAL
Sbjct  111  PQVKRGIEQVEEAL  124


>gi|258651085|ref|YP_003200241.1| hypothetical protein Namu_0841 [Nakamurella multipartita DSM 
44233]
 gi|258554310|gb|ACV77252.1| hypothetical protein Namu_0841 [Nakamurella multipartita DSM 
44233]
Length=394

 Score = 40.0 bits (92),  Expect = 0.17, Method: Compositional matrix adjust.
 Identities = 22/81 (28%), Positives = 40/81 (50%), Gaps = 4/81 (4%)

Query  35   LRERAEETRTDTRSRVEESRARL----TKLQEDLPEQLTELREKFTAEELRKAAEGYLEA  90
            L++RA +  TD    ++   A++     +L  +LP ++ E     T E +R   + Y+E 
Sbjct  145  LQQRAAQIATDVAEEIQTFTAQIPEKANELVAELPRRVAEFTPDLTPETVRDTLDAYIEM  204

Query  91   ATSRYNELVERGEAALERLRS  111
              + Y  L ERG+    ++RS
Sbjct  205  VGTIYESLAERGDKTWSKVRS  225


>gi|326332011|ref|ZP_08198296.1| putative LigA [Nocardioidaceae bacterium Broad-1]
 gi|325950149|gb|EGD42204.1| putative LigA [Nocardioidaceae bacterium Broad-1]
Length=183

 Score = 38.9 bits (89),  Expect = 0.44, Method: Compositional matrix adjust.
 Identities = 32/130 (25%), Positives = 62/130 (48%), Gaps = 26/130 (20%)

Query  13   PLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQEDLPEQLTE--  70
            PL A  G ADLA  TV +  T+L+++ +  R++  +++ ++RA+ T+       Q TE  
Sbjct  12   PLNAVAGVADLAYETVKDFATDLQKKVDGYRSEATTKLTDARAKATEKATAYRTQATEKA  71

Query  71   ------------------LREKFTA--EELRKAAEGYLE----AATSRYNELVERGEAAL  106
                               +E++T   E+L+   +  L+    +AT  Y++L  RGE  +
Sbjct  72   TAAKSTVTGFDPKTLPALAKEQYTVLPEKLKTTVKAKLDETTGSATGTYDKLATRGETFV  131

Query  107  ERLRSQQSFE  116
             + +  ++ E
Sbjct  132  AKFKKSEAVE  141



Lambda     K      H
   0.306    0.120    0.300 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 215040480604




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40