BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0478
Length=224
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607619|ref|NP_214992.1| deoxyribose-phosphate aldolase [Myc... 427 7e-118
gi|340625504|ref|YP_004743956.1| putative deoxyribose-phosphate ... 426 2e-117
gi|240169861|ref|ZP_04748520.1| deoxyribose-phosphate aldolase [... 335 2e-90
gi|118619641|ref|YP_907973.1| deoxyribose-phosphate aldolase [My... 333 1e-89
gi|15828326|ref|NP_302589.1| deoxyribose-phosphate aldolase [Myc... 329 1e-88
gi|254819806|ref|ZP_05224807.1| deoxyribose-phosphate aldolase [... 319 2e-85
gi|118464952|ref|YP_883800.1| deoxyribose-phosphate aldolase [My... 309 2e-82
gi|41410069|ref|NP_962905.1| deoxyribose-phosphate aldolase [Myc... 309 2e-82
gi|299689368|pdb|3NG3|A Chain A, Crystal Structure Of Deoxyribos... 309 2e-82
gi|254777109|ref|ZP_05218625.1| deoxyribose-phosphate aldolase [... 308 4e-82
gi|342859020|ref|ZP_08715674.1| deoxyribose-phosphate aldolase [... 291 6e-77
gi|301016068|pdb|3NDO|A Chain A, Crystal Structure Of Deoxyribos... 284 5e-75
gi|118471242|ref|YP_885325.1| deoxyribose-phosphate aldolase [My... 284 7e-75
gi|296168080|ref|ZP_06850146.1| deoxyribose-phosphate aldolase [... 272 3e-71
gi|332671358|ref|YP_004454366.1| deoxyribose-phosphate aldolase ... 259 3e-67
gi|169631156|ref|YP_001704805.1| deoxyribose-phosphate aldolase ... 259 3e-67
gi|120401826|ref|YP_951655.1| deoxyribose-phosphate aldolase [My... 256 2e-66
gi|184201536|ref|YP_001855743.1| deoxyribose-phosphate aldolase ... 253 1e-65
gi|226361179|ref|YP_002778957.1| deoxyribose-phosphate aldolase ... 252 2e-65
gi|111019087|ref|YP_702059.1| deoxyribose-phosphate aldolase [Rh... 252 3e-65
gi|226305082|ref|YP_002765040.1| deoxyribose-phosphate aldolase ... 250 8e-65
gi|126433250|ref|YP_001068941.1| deoxyribose-phosphate aldolase ... 248 5e-64
gi|333989106|ref|YP_004521720.1| deoxyribose-phosphate aldolase ... 248 6e-64
gi|108797626|ref|YP_637823.1| deoxyribose-phosphate aldolase [My... 248 6e-64
gi|145220703|ref|YP_001131381.1| deoxyribose-phosphate aldolase ... 246 2e-63
gi|229490184|ref|ZP_04384031.1| deoxyribose-phosphate aldolase [... 246 2e-63
gi|269955803|ref|YP_003325592.1| deoxyribose-phosphate aldolase ... 245 4e-63
gi|227497383|ref|ZP_03927615.1| deoxyribose-phosphate aldolase [... 244 8e-63
gi|336321610|ref|YP_004601578.1| deoxyribose-phosphate aldolase ... 244 9e-63
gi|329945945|ref|ZP_08293632.1| deoxyribose-phosphate aldolase [... 241 8e-62
gi|256378744|ref|YP_003102404.1| deoxyribose-phosphate aldolase ... 241 8e-62
gi|256832070|ref|YP_003160797.1| deoxyribose-phosphate aldolase ... 240 1e-61
gi|237785967|ref|YP_002906672.1| phosphomannomutase [Corynebacte... 240 1e-61
gi|320532985|ref|ZP_08033736.1| deoxyribose-phosphate aldolase [... 239 2e-61
gi|326774160|ref|ZP_08233442.1| deoxyribose-phosphate aldolase [... 237 8e-61
gi|312141141|ref|YP_004008477.1| deoxyribose-phosphate aldolase ... 237 9e-61
gi|343522186|ref|ZP_08759152.1| deoxyribose-phosphate aldolase [... 237 1e-60
gi|227541220|ref|ZP_03971269.1| deoxyribose-phosphate aldolase [... 237 1e-60
gi|262200788|ref|YP_003271996.1| deoxyribose-phosphate aldolase ... 236 1e-60
gi|54027177|ref|YP_121419.1| deoxyribose-phosphate aldolase [Noc... 236 2e-60
gi|325674037|ref|ZP_08153727.1| deoxyribose-phosphate aldolase [... 235 5e-60
gi|296128883|ref|YP_003636133.1| deoxyribose-phosphate aldolase ... 234 5e-60
gi|269795849|ref|YP_003315304.1| deoxyribose-phosphate aldolase ... 233 1e-59
gi|227487492|ref|ZP_03917808.1| deoxyribose-phosphate aldolase [... 233 2e-59
gi|326384033|ref|ZP_08205716.1| deoxyribose-phosphate aldolase [... 232 4e-59
gi|325068238|ref|ZP_08126911.1| deoxyribose-phosphate aldolase [... 231 5e-59
gi|333918289|ref|YP_004491870.1| deoxyribose-phosphate aldolase ... 231 6e-59
gi|260907497|ref|ZP_05915819.1| Deoxyribose-phosphate aldolase [... 231 9e-59
gi|23009149|ref|ZP_00050306.1| COG0274: Deoxyribose-phosphate al... 229 2e-58
gi|227494895|ref|ZP_03925211.1| deoxyribose-phosphate aldolase [... 227 8e-58
>gi|15607619|ref|NP_214992.1| deoxyribose-phosphate aldolase [Mycobacterium tuberculosis H37Rv]
gi|15839868|ref|NP_334905.1| deoxyribose-phosphate aldolase [Mycobacterium tuberculosis CDC1551]
gi|31791658|ref|NP_854151.1| deoxyribose-phosphate aldolase [Mycobacterium bovis AF2122/97]
83 more sequence titles
Length=224
Score = 427 bits (1097), Expect = 7e-118, Method: Compositional matrix adjust.
Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)
Query 1 VLGQPTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVR 60
+LGQPTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVR
Sbjct 1 MLGQPTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVR 60
Query 61 VAAVTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAA 120
VAAVTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAA
Sbjct 61 VAAVTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAA 120
Query 121 AGAVLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAE 180
AGAVLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAE
Sbjct 121 AGAVLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAE 180
Query 181 TVGPRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
TVGPRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS
Sbjct 181 TVGPRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
>gi|340625504|ref|YP_004743956.1| putative deoxyribose-phosphate aldolase DEOC [Mycobacterium canettii
CIPT 140010059]
gi|340003694|emb|CCC42818.1| putative deoxyribose-phosphate aldolase DEOC (phosphodeoxyriboaldolase)
(deoxyriboaldolase) [Mycobacterium canettii CIPT
140010059]
Length=224
Score = 426 bits (1094), Expect = 2e-117, Method: Compositional matrix adjust.
Identities = 222/224 (99%), Positives = 223/224 (99%), Gaps = 0/224 (0%)
Query 1 VLGQPTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVR 60
+LGQPTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVR
Sbjct 1 MLGQPTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVR 60
Query 61 VAAVTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAA 120
VAAVTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAA
Sbjct 61 VAAVTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAA 120
Query 121 AGAVLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAE 180
AGAVLKVIVESAVLLGQSNAHTLVDACR AEDAGADFVKTSTGCHPAGGATVRAVELMAE
Sbjct 121 AGAVLKVIVESAVLLGQSNAHTLVDACRVAEDAGADFVKTSTGCHPAGGATVRAVELMAE 180
Query 181 TVGPRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
TVGPRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS
Sbjct 181 TVGPRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
>gi|240169861|ref|ZP_04748520.1| deoxyribose-phosphate aldolase [Mycobacterium kansasii ATCC 12478]
Length=229
Score = 335 bits (860), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 184/225 (82%), Positives = 196/225 (88%), Gaps = 3/225 (1%)
Query 3 GQPTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVP---VAVQAGGV 59
G PTR QLAALVDHTLLKPE T ADVAALV EAAELGVYAVCVSPSMVP A+ AGGV
Sbjct 3 GPPTRRQLAALVDHTLLKPEATAADVAALVGEAAELGVYAVCVSPSMVPAARTALGAGGV 62
Query 60 RVAAVTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAA 119
R+AAVTGFPSGKH+S+VKAHEAA A+ASGA EIDMVIDIGAAL GD+DAVR+DIEAVRAA
Sbjct 63 RIAAVTGFPSGKHLSAVKAHEAALAVASGAVEIDMVIDIGAALAGDLDAVRTDIEAVRAA 122
Query 120 AAGAVLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMA 179
AGAVLKVIVESAVLL ++ H L CR AE AGADFVKTSTG HP GGATV AV LMA
Sbjct 123 TAGAVLKVIVESAVLLDRAGEHLLRAVCRVAEGAGADFVKTSTGFHPGGGATVAAVALMA 182
Query 180 ETVGPRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
+TVG RLGVKASGGIRTAA+AVAML AGATRLGLSGTR+VLDGLS
Sbjct 183 DTVGGRLGVKASGGIRTAAEAVAMLRAGATRLGLSGTRSVLDGLS 227
>gi|118619641|ref|YP_907973.1| deoxyribose-phosphate aldolase [Mycobacterium ulcerans Agy99]
gi|183980827|ref|YP_001849118.1| deoxyribose-phosphate aldolase DeoC [Mycobacterium marinum M]
gi|229487695|sp|A0PVY3.1|DEOC_MYCUA RecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; AltName:
Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase;
Short=Deoxyriboaldolase
gi|238690955|sp|B2HQU3.1|DEOC_MYCMM RecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; AltName:
Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase;
Short=Deoxyriboaldolase
gi|118571751|gb|ABL06502.1| deoxyribose-phosphate aldolase DeoC [Mycobacterium ulcerans Agy99]
gi|183174153|gb|ACC39263.1| deoxyribose-phosphate aldolase DeoC [Mycobacterium marinum M]
Length=226
Score = 333 bits (853), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 176/221 (80%), Positives = 192/221 (87%), Gaps = 0/221 (0%)
Query 3 GQPTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVA 62
GQPTR Q+AALVDHTLLKPE T ADV ALVAEAA+LGVYAVCVSPSMVP AV AGGVRVA
Sbjct 3 GQPTRDQVAALVDHTLLKPEATAADVVALVAEAADLGVYAVCVSPSMVPAAVSAGGVRVA 62
Query 63 AVTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAG 122
V GFPSGKH S++KAHEAA A+A GA E+DMVID+GAAL G +DAVRSDIEAVR A +G
Sbjct 63 TVAGFPSGKHASAIKAHEAALAVACGAVEVDMVIDVGAALAGHLDAVRSDIEAVRCATSG 122
Query 123 AVLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETV 182
AVLKVIVESA LLG ++ TL+ CR AEDAGADFVKTSTG HPAGGA+ RAVE+MA V
Sbjct 123 AVLKVIVESAALLGLADESTLIGVCRVAEDAGADFVKTSTGFHPAGGASTRAVEVMASAV 182
Query 183 GPRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
G RLGVKASGGIRTA DAVAML+AGATRLGLSGTRAVL+GL
Sbjct 183 GGRLGVKASGGIRTATDAVAMLSAGATRLGLSGTRAVLEGL 223
>gi|15828326|ref|NP_302589.1| deoxyribose-phosphate aldolase [Mycobacterium leprae TN]
gi|221230803|ref|YP_002504219.1| deoxyribose-phosphate aldolase [Mycobacterium leprae Br4923]
gi|13878464|sp|Q9CB45.1|DEOC_MYCLE RecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; AltName:
Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase;
Short=Deoxyriboaldolase
gi|254772447|sp|B8ZT93.1|DEOC_MYCLB RecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; AltName:
Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase;
Short=Deoxyriboaldolase
gi|13094019|emb|CAC31968.1| deoxyribose-phosphate aldolase [Mycobacterium leprae]
gi|219933910|emb|CAR72550.1| deoxyribose-phosphate aldolase [Mycobacterium leprae Br4923]
Length=226
Score = 329 bits (844), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 176/224 (79%), Positives = 190/224 (85%), Gaps = 2/224 (0%)
Query 3 GQPTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAG--GVR 60
GQPTR QLAALVDHTLLK E T ADVAALVAEA ELGVYAVCVSPSMVP AV+AG G+R
Sbjct 3 GQPTRKQLAALVDHTLLKSEATHADVAALVAEAVELGVYAVCVSPSMVPAAVEAGAGGLR 62
Query 61 VAAVTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAA 120
VA V GFPSG+HVS VKA EA A+ASGA+EIDMVI +GAAL GD+DAVRSDIE VR+A
Sbjct 63 VATVVGFPSGEHVSIVKAQEAVQAVASGATEIDMVIAVGAALAGDLDAVRSDIEMVRSAI 122
Query 121 AGAVLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAE 180
AG VLKVIVESAVLLGQ+N TL + C AE AGADFVKTSTG HPAGGA+VRAV LM E
Sbjct 123 AGVVLKVIVESAVLLGQANERTLAEVCHVAEAAGADFVKTSTGFHPAGGASVRAVTLMTE 182
Query 181 TVGPRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
VG RLGVKASGGIRTA DA+A+L+AGATRLGLS TR VLDGLS
Sbjct 183 AVGGRLGVKASGGIRTAVDAIALLDAGATRLGLSSTREVLDGLS 226
>gi|254819806|ref|ZP_05224807.1| deoxyribose-phosphate aldolase [Mycobacterium intracellulare
ATCC 13950]
Length=225
Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 180/222 (82%), Positives = 194/222 (88%), Gaps = 1/222 (0%)
Query 3 GQPTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAG-GVRV 61
G PTRA+LAA VDHTLLKPE T ADV ALVAEAAELGVYAVCVSPSMVPVAV AG GVRV
Sbjct 3 GHPTRAELAAFVDHTLLKPEATAADVTALVAEAAELGVYAVCVSPSMVPVAVHAGAGVRV 62
Query 62 AAVTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAA 121
A+V GFPSGKHVS+VKAHEAA A+ASGA E+DMVID+GAAL GD+DAVRSDI+AVR A
Sbjct 63 ASVAGFPSGKHVSAVKAHEAALAVASGACEVDMVIDVGAALAGDVDAVRSDIQAVRDAVG 122
Query 122 GAVLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAET 181
GAVLKVIVES+ LL ++ TL CRAAEDAGADFVKTSTG HP GGA+ RAV LMAET
Sbjct 123 GAVLKVIVESSALLALADERTLARVCRAAEDAGADFVKTSTGFHPTGGASARAVALMAET 182
Query 182 VGPRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
VG RLGVKASGGIRTAADA+AML+AGATRLGLSGTR VLDGL
Sbjct 183 VGGRLGVKASGGIRTAADALAMLDAGATRLGLSGTRGVLDGL 224
>gi|118464952|ref|YP_883800.1| deoxyribose-phosphate aldolase [Mycobacterium avium 104]
gi|166198559|sp|A0QLL2.1|DEOC_MYCA1 RecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; AltName:
Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase;
Short=Deoxyriboaldolase
gi|118166239|gb|ABK67136.1| deoxyribose-phosphate aldolase [Mycobacterium avium 104]
Length=223
Score = 309 bits (792), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 181/220 (83%), Positives = 195/220 (89%), Gaps = 1/220 (0%)
Query 5 PTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAG-GVRVAA 63
PTRAQLAA VDHTLLKPE T ADVAALV EAAELGVYAVCVSP MVP AVQAG GVRVA+
Sbjct 3 PTRAQLAAFVDHTLLKPEATAADVAALVTEAAELGVYAVCVSPPMVPAAVQAGAGVRVAS 62
Query 64 VTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGA 123
V GFPSGKHVS+VKAHEAA A+ASGA+EIDMVID+GAAL GD+D VR+DI AVR A GA
Sbjct 63 VAGFPSGKHVSAVKAHEAALAVASGAAEIDMVIDVGAALAGDLDGVRADIAAVRGAVGGA 122
Query 124 VLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVG 183
VLKVIVES+ LL ++ HTLV CRAAEDAGADFVKTSTG HP+GGA+VRAV LMAE VG
Sbjct 123 VLKVIVESSALLALADEHTLVRVCRAAEDAGADFVKTSTGFHPSGGASVRAVALMAEAVG 182
Query 184 PRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
RLGVKASGGIRTAADA+AML+AGATRLGLSGTRAVLDGL
Sbjct 183 GRLGVKASGGIRTAADALAMLDAGATRLGLSGTRAVLDGL 222
>gi|41410069|ref|NP_962905.1| deoxyribose-phosphate aldolase [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|81413075|sp|Q73SV2.1|DEOC_MYCPA RecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; AltName:
Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase;
Short=Deoxyriboaldolase
gi|41398902|gb|AAS06521.1| DeoC [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336460414|gb|EGO39312.1| deoxyribose-phosphate aldolase [Mycobacterium avium subsp. paratuberculosis
S397]
Length=223
Score = 309 bits (791), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 181/220 (83%), Positives = 195/220 (89%), Gaps = 1/220 (0%)
Query 5 PTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAG-GVRVAA 63
PTRAQLAA VDHTLLKPE T ADVAALV EAAELGVYAVCVSP+MVP AVQAG GVRVA+
Sbjct 3 PTRAQLAAFVDHTLLKPEATAADVAALVTEAAELGVYAVCVSPTMVPAAVQAGAGVRVAS 62
Query 64 VTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGA 123
V GFPSGKHVS+VKAHEAA A+ASGA+EIDMVID+GAAL GD+D VR+DI AVR A GA
Sbjct 63 VAGFPSGKHVSAVKAHEAALAVASGAAEIDMVIDVGAALAGDLDGVRADIAAVRDAVGGA 122
Query 124 VLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVG 183
VLKVIVES+ LL ++ HTLV CRAAEDAGADFVKTSTG HP GGA+VRAV LMAE VG
Sbjct 123 VLKVIVESSALLALADEHTLVRVCRAAEDAGADFVKTSTGFHPTGGASVRAVALMAEAVG 182
Query 184 PRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
RLGVKASGGIRTAADA+AML+AGATRLGLSGTRAVLDGL
Sbjct 183 GRLGVKASGGIRTAADALAMLDAGATRLGLSGTRAVLDGL 222
>gi|299689368|pdb|3NG3|A Chain A, Crystal Structure Of Deoxyribose Phosphate Aldolase
From Mycobacterium Avium 104 In A Schiff Base With An Unknown
Aldehyde
gi|299689369|pdb|3NG3|B Chain B, Crystal Structure Of Deoxyribose Phosphate Aldolase
From Mycobacterium Avium 104 In A Schiff Base With An Unknown
Aldehyde
gi|299689370|pdb|3NG3|C Chain C, Crystal Structure Of Deoxyribose Phosphate Aldolase
From Mycobacterium Avium 104 In A Schiff Base With An Unknown
Aldehyde
gi|299689371|pdb|3NG3|D Chain D, Crystal Structure Of Deoxyribose Phosphate Aldolase
From Mycobacterium Avium 104 In A Schiff Base With An Unknown
Aldehyde
Length=227
Score = 309 bits (791), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 181/220 (83%), Positives = 195/220 (89%), Gaps = 1/220 (0%)
Query 5 PTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAG-GVRVAA 63
PTRAQLAA VDHTLLKPE T ADVAALV EAAELGVYAVCVSP MVP AVQAG GVRVA+
Sbjct 7 PTRAQLAAFVDHTLLKPEATAADVAALVTEAAELGVYAVCVSPPMVPAAVQAGAGVRVAS 66
Query 64 VTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGA 123
V GFPSGKHVS+VKAHEAA A+ASGA+EIDMVID+GAAL GD+D VR+DI AVR A GA
Sbjct 67 VAGFPSGKHVSAVKAHEAALAVASGAAEIDMVIDVGAALAGDLDGVRADIAAVRGAVGGA 126
Query 124 VLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVG 183
VLKVIVES+ LL ++ HTLV CRAAEDAGADFVKTSTG HP+GGA+VRAV LMAE VG
Sbjct 127 VLKVIVESSALLALADEHTLVRVCRAAEDAGADFVKTSTGFHPSGGASVRAVALMAEAVG 186
Query 184 PRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
RLGVKASGGIRTAADA+AML+AGATRLGLSGTRAVLDGL
Sbjct 187 GRLGVKASGGIRTAADALAMLDAGATRLGLSGTRAVLDGL 226
>gi|254777109|ref|ZP_05218625.1| deoxyribose-phosphate aldolase [Mycobacterium avium subsp. avium
ATCC 25291]
Length=223
Score = 308 bits (788), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 181/220 (83%), Positives = 194/220 (89%), Gaps = 1/220 (0%)
Query 5 PTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAG-GVRVAA 63
PTRAQLAA VDHTLLKPE T ADVAALV EAAELGVYAVCVSP MVPVAVQAG GVRVA+
Sbjct 3 PTRAQLAAFVDHTLLKPEATAADVAALVTEAAELGVYAVCVSPPMVPVAVQAGAGVRVAS 62
Query 64 VTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGA 123
V GFPSGKHV +VKAHEAA A+ASGA+EIDMVID+GAAL GD+D VR+DI AVR A GA
Sbjct 63 VAGFPSGKHVPAVKAHEAALAVASGAAEIDMVIDVGAALAGDLDGVRADIAAVRGAVGGA 122
Query 124 VLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVG 183
VLKVIVES+ LL ++ HTLV CRAAEDAGADFVKTSTG HP GGA+VRAV LMAE VG
Sbjct 123 VLKVIVESSALLALADEHTLVRVCRAAEDAGADFVKTSTGFHPTGGASVRAVALMAEAVG 182
Query 184 PRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
RLGVKASGGIRTAADA+AML+AGATRLGLSGTRAVLDGL
Sbjct 183 GRLGVKASGGIRTAADALAMLDAGATRLGLSGTRAVLDGL 222
>gi|342859020|ref|ZP_08715674.1| deoxyribose-phosphate aldolase [Mycobacterium colombiense CECT
3035]
gi|342133261|gb|EGT86464.1| deoxyribose-phosphate aldolase [Mycobacterium colombiense CECT
3035]
Length=216
Score = 291 bits (744), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 170/215 (80%), Positives = 186/215 (87%), Gaps = 1/215 (0%)
Query 10 LAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAG-GVRVAAVTGFP 68
+AA VDHTLLKPE T ADVAALVAEAA LGVYAVCVSPSMVPVAV+AG GVRVA+V GFP
Sbjct 1 MAAFVDHTLLKPEATDADVAALVAEAAALGVYAVCVSPSMVPVAVRAGSGVRVASVAGFP 60
Query 69 SGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGAVLKVI 128
SGKH+ +VKAHEAA A+ASGA EIDMVID+GAAL GD++AVRSD+ AVR A GAVLKVI
Sbjct 61 SGKHLPAVKAHEAALAVASGACEIDMVIDVGAALAGDLEAVRSDVHAVRGAIGGAVLKVI 120
Query 129 VESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGPRLGV 188
VESA LL ++ TL CRAAED GADFVKTSTG HPAGGA+VRAV +MAE VG RLGV
Sbjct 121 VESAALLALADEPTLAQVCRAAEDGGADFVKTSTGFHPAGGASVRAVAVMAEAVGGRLGV 180
Query 189 KASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
KASGGIRTA DA+AML+AGATRLGLSGTR VLDGL
Sbjct 181 KASGGIRTAEDALAMLDAGATRLGLSGTRGVLDGL 215
>gi|301016068|pdb|3NDO|A Chain A, Crystal Structure Of Deoxyribose Phosphate Aldolase
From Mycobacterium Smegmatis
gi|301016069|pdb|3NDO|B Chain B, Crystal Structure Of Deoxyribose Phosphate Aldolase
From Mycobacterium Smegmatis
Length=231
Score = 284 bits (727), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 156/220 (71%), Positives = 176/220 (80%), Gaps = 2/220 (0%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVA--VQAGGVRVAA 63
TRAQ+AALVDHTLLKPE T +DV ALV EAA+LGV+AVCVSP +V VA V G+ +AA
Sbjct 9 TRAQVAALVDHTLLKPEATPSDVTALVDEAADLGVFAVCVSPPLVSVAAGVAPSGLAIAA 68
Query 64 VTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGA 123
V GFPSGKHV +KA EA A+A+GA+EIDMVID+GAAL GD+DAV +DI AVR A A
Sbjct 69 VAGFPSGKHVPGIKATEAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAA 128
Query 124 VLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVG 183
LKVIVESA LL S L D CR A DAGADFVKTSTG HP+GGA+V+AVE+MA TVG
Sbjct 129 TLKVIVESAALLEFSGEPLLADVCRVARDAGADFVKTSTGFHPSGGASVQAVEIMARTVG 188
Query 184 PRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
RLGVKASGGIRTA A AML+AGATRLGLSG+RAVLDG
Sbjct 189 ERLGVKASGGIRTAEQAAAMLDAGATRLGLSGSRAVLDGF 228
>gi|118471242|ref|YP_885325.1| deoxyribose-phosphate aldolase [Mycobacterium smegmatis str.
MC2 155]
gi|118172529|gb|ABK73425.1| deoxyribose-phosphate aldolase [Mycobacterium smegmatis str.
MC2 155]
Length=227
Score = 284 bits (727), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 156/220 (71%), Positives = 176/220 (80%), Gaps = 2/220 (0%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVA--VQAGGVRVAA 63
TRAQ+AALVDHTLLKPE T +DV ALV EAA+LGV+AVCVSP +V VA V G+ +AA
Sbjct 5 TRAQVAALVDHTLLKPEATPSDVTALVDEAADLGVFAVCVSPPLVSVAAGVAPSGLAIAA 64
Query 64 VTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGA 123
V GFPSGKHV +KA EA A+A+GA+EIDMVID+GAAL GD+DAV +DI AVR A A
Sbjct 65 VAGFPSGKHVPGIKATEAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAA 124
Query 124 VLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVG 183
LKVIVESA LL S L D CR A DAGADFVKTSTG HP+GGA+V+AVE+MA TVG
Sbjct 125 TLKVIVESAALLEFSGEPLLADVCRVARDAGADFVKTSTGFHPSGGASVQAVEIMARTVG 184
Query 184 PRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
RLGVKASGGIRTA A AML+AGATRLGLSG+RAVLDG
Sbjct 185 ERLGVKASGGIRTAEQAAAMLDAGATRLGLSGSRAVLDGF 224
>gi|296168080|ref|ZP_06850146.1| deoxyribose-phosphate aldolase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896887|gb|EFG76515.1| deoxyribose-phosphate aldolase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=224
Score = 272 bits (695), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 177/220 (81%), Positives = 198/220 (90%), Gaps = 0/220 (0%)
Query 4 QPTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAA 63
+PTR+QLAA+VDHTLLKPE T ADVAALVAEAAELGVYAVCVSPSMVPVAV+AGG VA+
Sbjct 4 KPTRSQLAAMVDHTLLKPEATEADVAALVAEAAELGVYAVCVSPSMVPVAVRAGGPPVAS 63
Query 64 VTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGA 123
V GFPSGKH+S+VKAHEA A+A+GA+E+DMVIDIGAAL GD++AVR+DI AVRAAA A
Sbjct 64 VAGFPSGKHLSAVKAHEAGQAVAAGAAEVDMVIDIGAALAGDLEAVRADIAAVRAAAPDA 123
Query 124 VLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVG 183
VLKVIVESAVLL ++ TLV CRAAEDAGADFVKTSTG HPAGGA+VRAV +M++TVG
Sbjct 124 VLKVIVESAVLLSGTDESTLVQVCRAAEDAGADFVKTSTGFHPAGGASVRAVAVMSQTVG 183
Query 184 PRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
RLGVKASGGIRTAA AVAML+AGATRLGLSGTRAVLD L
Sbjct 184 GRLGVKASGGIRTAAAAVAMLDAGATRLGLSGTRAVLDEL 223
>gi|332671358|ref|YP_004454366.1| deoxyribose-phosphate aldolase [Cellulomonas fimi ATCC 484]
gi|332340396|gb|AEE46979.1| deoxyribose-phosphate aldolase [Cellulomonas fimi ATCC 484]
Length=231
Score = 259 bits (661), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/219 (70%), Positives = 167/219 (77%), Gaps = 6/219 (2%)
Query 8 AQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAG-GVRVAAVTG 66
A LA LVDHTLLKPE T ADV ALV EAA LGVY+VCVSPS +P+ A G+ VA V G
Sbjct 12 AGLARLVDHTLLKPEATVADVQALVEEAARLGVYSVCVSPSFLPLDTSAAPGLHVATVCG 71
Query 67 FPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAG-AVL 125
FPSGKH S VKA EAA ++ GA E+DMVID+GAA+ G DAV +DI AVRAA G VL
Sbjct 72 FPSGKHHSDVKAAEAARSVRDGADEVDMVIDVGAAIEGRFDAVEADIAAVRAATPGDVVL 131
Query 126 KVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGPR 185
KVI+ESA L + +V C AAE AGADFVKTSTG HPAGGATV AVELMA TVG R
Sbjct 132 KVIIESAALTDEQ----VVAVCEAAERAGADFVKTSTGFHPAGGATVHAVELMARTVGGR 187
Query 186 LGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
LGVKASGGIRT+ADAVAM+ AGATRLGLSGT AVL GL
Sbjct 188 LGVKASGGIRTSADAVAMVQAGATRLGLSGTAAVLAGLE 226
>gi|169631156|ref|YP_001704805.1| deoxyribose-phosphate aldolase DeoC [Mycobacterium abscessus
ATCC 19977]
gi|169243123|emb|CAM64151.1| Deoxyribose-phosphate aldolase (DeoC) [Mycobacterium abscessus]
Length=218
Score = 259 bits (661), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 154/217 (71%), Positives = 172/217 (80%), Gaps = 2/217 (0%)
Query 10 LAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVR--VAAVTGF 67
+AAL+DHTLLKPE T DV ALVAEA +LGV AVCVSPSM+PV + G R VA V GF
Sbjct 1 MAALIDHTLLKPEATPEDVRALVAEAVDLGVLAVCVSPSMLPVLLPEGVERLLVAGVVGF 60
Query 68 PSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGAVLKV 127
PSGKH+SSVKAHEAA A+A+GA EIDMVID+GAA+ GD AV+ DIEAVR A A LKV
Sbjct 61 PSGKHLSSVKAHEAALAVAAGAHEIDMVIDVGAAVGGDFGAVQGDIEAVRRAVPAATLKV 120
Query 128 IVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGPRLG 187
I+ESA LL +S + ACRA+E AGADFVKTSTG HPAGGATV AV +MAETVG RL
Sbjct 121 IIESAALLERSGPEAVRAACRASEAAGADFVKTSTGFHPAGGATVEAVRIMAETVGDRLQ 180
Query 188 VKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
VKASGGIRTA DA AML AGATRLGLSG+R VLDG +
Sbjct 181 VKASGGIRTARDAAAMLEAGATRLGLSGSRIVLDGFA 217
>gi|120401826|ref|YP_951655.1| deoxyribose-phosphate aldolase [Mycobacterium vanbaalenii PYR-1]
gi|119954644|gb|ABM11649.1| deoxyribose-phosphate aldolase [Mycobacterium vanbaalenii PYR-1]
Length=225
Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 158/223 (71%), Positives = 181/223 (82%), Gaps = 1/223 (0%)
Query 2 LGQPTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVP-VAVQAGGVR 60
+G +RA++AALVDHTLLKPE T AD+ ALV EAAELGVYA+CVSP+ V V++ A
Sbjct 1 MGSYSRARVAALVDHTLLKPEATEADIEALVTEAAELGVYAICVSPTFVAAVSLLAPDAT 60
Query 61 VAAVTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAA 120
VA+V GFPSGKHVS++KA EA A+ +GA E+DMVID+G AL G++ AVRSDI AVRAAA
Sbjct 61 VASVVGFPSGKHVSAIKAEEARLAVEAGAREVDMVIDVGCALAGELGAVRSDIAAVRAAA 120
Query 121 AGAVLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAE 180
AVLKVIVESA +L S LVD CR AEDAGADFVKTSTG HP+GGA+VRAVELMA
Sbjct 121 PEAVLKVIVESAAILQISGEPLLVDICRVAEDAGADFVKTSTGFHPSGGASVRAVELMAG 180
Query 181 TVGPRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
VG RLGVKASGGIR+AADA AML+AGATRLGLSGTRAVL G
Sbjct 181 AVGGRLGVKASGGIRSAADAAAMLDAGATRLGLSGTRAVLAGF 223
>gi|184201536|ref|YP_001855743.1| deoxyribose-phosphate aldolase [Kocuria rhizophila DC2201]
gi|238689201|sp|B2GG36.1|DEOC_KOCRD RecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; AltName:
Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase;
Short=Deoxyriboaldolase
gi|183581766|dbj|BAG30237.1| deoxyribose-phosphate aldolase [Kocuria rhizophila DC2201]
Length=218
Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/219 (66%), Positives = 168/219 (77%), Gaps = 6/219 (2%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAAVT 65
TRA+LAA+VDHTLLKPE+T VA L EA ELG Y++CVSPS + V + G V++A V
Sbjct 3 TRAELAAMVDHTLLKPESTAEQVAELAREAGELGTYSICVSPSRLDVELPEG-VKLATVC 61
Query 66 GFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAG-AV 124
GFPSG H S VKA EAA ++A GA E+DMVI++G A+ GD D VR DIEAVRAA V
Sbjct 62 GFPSGAHPSEVKAVEAADSVAQGADEVDMVINLGLAMDGDWDGVREDIEAVRAACPEPTV 121
Query 125 LKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGP 184
LKVI+ESA L + +V AC+AAE AGADFVKTSTG HPAGGA+V AV LMA+TVG
Sbjct 122 LKVIIESAAL----SDEQIVAACQAAEVAGADFVKTSTGFHPAGGASVEAVRLMAQTVGD 177
Query 185 RLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
RLGVKASGGIRT A+AM+ AGATRLGLSGTR+VL+GL
Sbjct 178 RLGVKASGGIRTTEAALAMVEAGATRLGLSGTRSVLEGL 216
>gi|226361179|ref|YP_002778957.1| deoxyribose-phosphate aldolase [Rhodococcus opacus B4]
gi|226239664|dbj|BAH50012.1| deoxyribose-phosphate aldolase [Rhodococcus opacus B4]
Length=221
Score = 252 bits (644), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/219 (67%), Positives = 169/219 (78%), Gaps = 7/219 (3%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAAVT 65
TR+Q+A LVDHTLLKPE T DV AL+ EA LGV AVCVSPSM+PV +A G+ AAV
Sbjct 7 TRSQVADLVDHTLLKPEATTDDVTALIDEARALGVLAVCVSPSMLPV--RAPGLVTAAVV 64
Query 66 GFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGA-V 124
GFPSGKH S VK EA A+ GA EIDMVIDIGAA+ GD +AV +D+ VR A + V
Sbjct 65 GFPSGKHHSLVKGAEARLAVDQGAQEIDMVIDIGAAVAGDFNAVLADVLTVREAVGDSTV 124
Query 125 LKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGP 184
LKVI+E+A L ++ +V+ACRAAE AGA+FVKTSTG HPAGGATV AV LMA+TVG
Sbjct 125 LKVILETAALSDEA----IVEACRAAERAGANFVKTSTGFHPAGGATVEAVRLMAQTVGG 180
Query 185 RLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
R+GVKASGGIRTA A+ M+ AGATRLGLSGTRAVLDGL
Sbjct 181 RMGVKASGGIRTAQAALEMIAAGATRLGLSGTRAVLDGL 219
>gi|111019087|ref|YP_702059.1| deoxyribose-phosphate aldolase [Rhodococcus jostii RHA1]
gi|110818617|gb|ABG93901.1| deoxyribose-phosphate aldolase [Rhodococcus jostii RHA1]
Length=238
Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 147/219 (68%), Positives = 168/219 (77%), Gaps = 7/219 (3%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAAVT 65
TR+Q+A LVDHTLLKPE T DV AL+AEA LGV AVCVSPSM+PV +A G+ AAV
Sbjct 24 TRSQVADLVDHTLLKPEATTDDVTALIAEARSLGVLAVCVSPSMLPV--KAPGLVTAAVV 81
Query 66 GFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAG-AV 124
GFPSGKH S VK EA A+ GA EIDMVIDIGAA+ GD +AV +D+ VR A V
Sbjct 82 GFPSGKHHSLVKGAEARLAVDQGAQEIDMVIDIGAAVAGDFNAVLADVLTVREAVGDHTV 141
Query 125 LKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGP 184
LKVI+E+A L ++ +V+ACRAAE AGA+FVKTSTG HPAGGATV AV LMA TVG
Sbjct 142 LKVILETAALSDEA----IVEACRAAERAGANFVKTSTGFHPAGGATVEAVRLMAHTVGG 197
Query 185 RLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
R+GVKASGGIRTA A+ M+ AGATRLGLSGTRAVLDGL
Sbjct 198 RIGVKASGGIRTAQAALDMIAAGATRLGLSGTRAVLDGL 236
>gi|226305082|ref|YP_002765040.1| deoxyribose-phosphate aldolase [Rhodococcus erythropolis PR4]
gi|226184197|dbj|BAH32301.1| deoxyribose-phosphate aldolase [Rhodococcus erythropolis PR4]
Length=221
Score = 250 bits (639), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 144/220 (66%), Positives = 169/220 (77%), Gaps = 7/220 (3%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAAVT 65
TR+Q+AA+VDHTLLKPE T ADV AL+ EA LGV AVCVSPSM+P+ +A G+ AAV
Sbjct 7 TRSQVAAMVDHTLLKPEATAADVTALIDEARSLGVLAVCVSPSMLPI--RADGLVTAAVV 64
Query 66 GFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAA-AAGAV 124
GFPSGKH S VK EA A+ GA+EIDMVID+GAA+ GD AV +DI VR A A+
Sbjct 65 GFPSGKHHSLVKGAEARLAVDQGATEIDMVIDVGAAVAGDYSAVLADILTVREAMGESAI 124
Query 125 LKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGP 184
LKVI+E+A L ++ +V+ CRAA AGA+FVKTSTG HPAGGATV AVELMA TVGP
Sbjct 125 LKVILETAALSDEA----IVECCRAAVRAGANFVKTSTGFHPAGGATVEAVELMARTVGP 180
Query 185 RLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
+GVKASGGIRT A+ M+ AGATRLGLSGTRAVLDGL+
Sbjct 181 GVGVKASGGIRTTQAALDMIAAGATRLGLSGTRAVLDGLT 220
>gi|126433250|ref|YP_001068941.1| deoxyribose-phosphate aldolase [Mycobacterium sp. JLS]
gi|126233050|gb|ABN96450.1| deoxyribose-phosphate aldolase [Mycobacterium sp. JLS]
Length=226
Score = 248 bits (633), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 150/226 (67%), Positives = 172/226 (77%), Gaps = 3/226 (1%)
Query 2 LGQPTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQ--AGGV 59
+G TR ++A LVDHTLLKPE DV ALV EA LGVYA CVSPSMVP AV+
Sbjct 1 MGGWTRERVAGLVDHTLLKPEAGEGDVEALVEEAEALGVYAACVSPSMVPAAVRMRPFST 60
Query 60 RVAAVTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAA 119
++AAV GFPSGKH+ +VKAHEAA A+A+GA EIDMVID+GAAL GDIDAVR+DI AVRAA
Sbjct 61 KIAAVVGFPSGKHLPAVKAHEAALAVAAGADEIDMVIDVGAALAGDIDAVRADIAAVRAA 120
Query 120 -AAGAVLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELM 178
+LKVIVESA LL LVD C AA+ GA++VKTSTG HP GGA+ AVE+M
Sbjct 121 IGERTLLKVIVESAALLELGGRDVLVDTCLAAKAVGAEYVKTSTGFHPLGGASAGAVEIM 180
Query 179 AETVGPRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
VGP++ VKASGGIRTAADA+AML+AGATRLGLS TRAVLD L
Sbjct 181 VAAVGPQVEVKASGGIRTAADAIAMLDAGATRLGLSATRAVLDDLD 226
>gi|333989106|ref|YP_004521720.1| deoxyribose-phosphate aldolase DeoC [Mycobacterium sp. JDM601]
gi|333485074|gb|AEF34466.1| deoxyribose-phosphate aldolase DeoC [Mycobacterium sp. JDM601]
Length=227
Score = 248 bits (632), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 159/219 (73%), Positives = 179/219 (82%), Gaps = 2/219 (0%)
Query 7 RAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAG--GVRVAAV 64
RA++A LVDHTLL+PE T V ALVAEAAELGV AVCVSPSMV +A A GVR+AAV
Sbjct 8 RARVAELVDHTLLQPEATTQQVVALVAEAAELGVAAVCVSPSMVAIAAAANPVGVRIAAV 67
Query 65 TGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGAV 124
GFPSGKH+ VKA +AA A+A+GA+EIDMVID+GAA+ GD AV +D+ VRAAA AV
Sbjct 68 AGFPSGKHLPVVKAQDAALAVAAGAAEIDMVIDVGAAVAGDFAAVGADVGTVRAAAPDAV 127
Query 125 LKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGP 184
LKVIVESA LL + TLV ACRAA DAGADFVKTSTG HP GGA+VRAV LMA+TVG
Sbjct 128 LKVIVESAALLELAGEATLVAACRAAADAGADFVKTSTGFHPTGGASVRAVRLMADTVGG 187
Query 185 RLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
LGVKASGGIR+A DA+AML+AGATRLGLSGTRAVLDGL
Sbjct 188 SLGVKASGGIRSADDALAMLDAGATRLGLSGTRAVLDGL 226
>gi|108797626|ref|YP_637823.1| deoxyribose-phosphate aldolase [Mycobacterium sp. MCS]
gi|119866713|ref|YP_936665.1| deoxyribose-phosphate aldolase [Mycobacterium sp. KMS]
gi|108768045|gb|ABG06767.1| deoxyribose-phosphate aldolase [Mycobacterium sp. MCS]
gi|119692802|gb|ABL89875.1| deoxyribose-phosphate aldolase [Mycobacterium sp. KMS]
Length=226
Score = 248 bits (632), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 150/226 (67%), Positives = 172/226 (77%), Gaps = 3/226 (1%)
Query 2 LGQPTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVP--VAVQAGGV 59
+G TR ++A LVDHTLLKPE DV ALV EA LGVYA CVSPSMVP V V+
Sbjct 1 MGGWTRERVAGLVDHTLLKPEAGEGDVEALVEEAEALGVYAACVSPSMVPAAVRVRPFST 60
Query 60 RVAAVTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAA 119
++AAV GFPSGKH+ +VKAHEAA A+A+GA EIDMVID+GAAL GDIDAVR+DI AVRAA
Sbjct 61 KIAAVVGFPSGKHLPAVKAHEAALAVAAGADEIDMVIDVGAALAGDIDAVRADIAAVRAA 120
Query 120 -AAGAVLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELM 178
+LKVIVESA LL LVD C AA+ GA++VKTSTG HP GGA+ AVE+M
Sbjct 121 IGERTLLKVIVESAALLELGGRDVLVDTCLAAKAVGAEYVKTSTGFHPLGGASAGAVEIM 180
Query 179 AETVGPRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
VGP++ VKASGGIRTAADA+AML+AGATRLGLS TRAVLD L
Sbjct 181 VAAVGPQVEVKASGGIRTAADAIAMLDAGATRLGLSATRAVLDDLD 226
>gi|145220703|ref|YP_001131381.1| deoxyribose-phosphate aldolase [Mycobacterium gilvum PYR-GCK]
gi|315442345|ref|YP_004075224.1| deoxyribose-phosphate aldolase [Mycobacterium sp. Spyr1]
gi|145213189|gb|ABP42593.1| deoxyribose-phosphate aldolase [Mycobacterium gilvum PYR-GCK]
gi|315260648|gb|ADT97389.1| deoxyribose-phosphate aldolase [Mycobacterium sp. Spyr1]
Length=225
Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/223 (70%), Positives = 174/223 (79%), Gaps = 1/223 (0%)
Query 2 LGQPTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGV-R 60
+G TRAQ+AALVDHTLLKPE T AD+ A+VAEA L V A+CVSP+ V
Sbjct 1 MGSYTRAQVAALVDHTLLKPEATEADIEAVVAEALALEVKAICVSPTFVAAVASLAPAAT 60
Query 61 VAAVTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAA 120
VA+V GFPSGKH+SSVKA EA AA A+GA+EIDMVID+GAAL G +DAVR+DI AVRAAA
Sbjct 61 VASVVGFPSGKHLSSVKAAEAHAAAAAGAAEIDMVIDVGAALAGQLDAVRADIAAVRAAA 120
Query 121 AGAVLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAE 180
VLKVIVESA LL L+D CR AEDAGA+FVKTSTG HP+GGA+ RAVELMA
Sbjct 121 PETVLKVIVESAALLEFGGQPILLDVCRIAEDAGAEFVKTSTGFHPSGGASPRAVELMAG 180
Query 181 TVGPRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
VG RLGVKASGGIRTAA A ML+AGATRLGLSGTRAVLDGL
Sbjct 181 AVGGRLGVKASGGIRTAAAATEMLDAGATRLGLSGTRAVLDGL 223
>gi|229490184|ref|ZP_04384031.1| deoxyribose-phosphate aldolase [Rhodococcus erythropolis SK121]
gi|229322932|gb|EEN88706.1| deoxyribose-phosphate aldolase [Rhodococcus erythropolis SK121]
Length=243
Score = 246 bits (628), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/220 (65%), Positives = 168/220 (77%), Gaps = 7/220 (3%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAAVT 65
TR+Q+AA+VDHTLLKPE T ADV AL+ EA LGV AVCVSPSM+P+ +A G+ AAV
Sbjct 29 TRSQVAAMVDHTLLKPEATAADVTALIDEARSLGVLAVCVSPSMLPI--RAEGLLTAAVV 86
Query 66 GFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAA-GAV 124
GFPSGKH S VK EA A+ GA+EIDMVID+GAA+ GD AV +DI VR A A+
Sbjct 87 GFPSGKHHSLVKGAEARLAVDQGAAEIDMVIDVGAAVAGDYSAVLADILTVREAMGESAI 146
Query 125 LKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGP 184
LKVI+E+A L ++ +V+ CRAA AGA+FVKTSTG HPAGGATV AV LMA TVGP
Sbjct 147 LKVILETAALSDEA----IVECCRAAVRAGANFVKTSTGFHPAGGATVEAVALMARTVGP 202
Query 185 RLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
+GVKASGGIRT A+ M+ AGATRLGLSG+RAVLDGL+
Sbjct 203 GVGVKASGGIRTTQAALDMIAAGATRLGLSGSRAVLDGLA 242
>gi|269955803|ref|YP_003325592.1| deoxyribose-phosphate aldolase [Xylanimonas cellulosilytica DSM
15894]
gi|269304484|gb|ACZ30034.1| deoxyribose-phosphate aldolase [Xylanimonas cellulosilytica DSM
15894]
Length=236
Score = 245 bits (625), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 139/218 (64%), Positives = 165/218 (76%), Gaps = 7/218 (3%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQ--AGGVRVAA 63
T A+LA+ +DHTLLKPE T ADV ALV E A LGV++VCVSP+ VP+AV AG ++VA
Sbjct 8 TPAELASFIDHTLLKPEATDADVVALVEEGARLGVFSVCVSPTFVPLAVARAAGRLKVAT 67
Query 64 VTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAG- 122
V GFPSGKHVSSVKA EAA ++A GA E+DMVID+GAA D +AV +DI AVR A G
Sbjct 68 VCGFPSGKHVSSVKAAEAARSIADGADEVDMVIDVGAAKAADFEAVEADIAAVRTAVPGD 127
Query 123 AVLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETV 182
+LKVI+ES+ L + +V CRAAE AGAD+VKTSTG HP GGATV V LMA+TV
Sbjct 128 RLLKVIIESSAL----DDDEIVAVCRAAEAAGADYVKTSTGFHPTGGATVHTVTLMADTV 183
Query 183 GPRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVL 220
RLGVKASGGIRT ADA+A + AGATRLG+SG +VL
Sbjct 184 NGRLGVKASGGIRTLADALAAIEAGATRLGMSGAASVL 221
>gi|227497383|ref|ZP_03927615.1| deoxyribose-phosphate aldolase [Actinomyces urogenitalis DSM
15434]
gi|226833254|gb|EEH65637.1| deoxyribose-phosphate aldolase [Actinomyces urogenitalis DSM
15434]
Length=217
Score = 244 bits (622), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 134/219 (62%), Positives = 164/219 (75%), Gaps = 5/219 (2%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAAVT 65
TRA++AA++DHTLLKPE T VAAL+A+ AELGVY+VCVSP+ +PV V G + VA V
Sbjct 3 TRAEIAAIIDHTLLKPEATGEQVAALIAQGAELGVYSVCVSPNQLPVQVPQG-LHVATVC 61
Query 66 GFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGAVL 125
GFPSG H +SVKA EAA ++A GA E+DMV+++ D D V +DI AV+ A A+L
Sbjct 62 GFPSGAHATSVKAAEAADSVAKGAQEVDMVVNLKLVKEHDFDGVEADIRAVKEAVGQALL 121
Query 126 KVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGPR 185
KVI+ESA L + +V CRA+E AGADFVKTSTG HPAGGA+V AVELM TVG R
Sbjct 122 KVIIESAALTDEE----IVAVCRASERAGADFVKTSTGFHPAGGASVHAVELMRATVGDR 177
Query 186 LGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
LGVKASGGIR AA AVAM+ AGA+RLG+S T A+L+GL
Sbjct 178 LGVKASGGIRDAATAVAMVKAGASRLGVSSTAAILEGLE 216
>gi|336321610|ref|YP_004601578.1| deoxyribose-phosphate aldolase [Cellvibrio gilvus ATCC 13127]
gi|336105191|gb|AEI13010.1| deoxyribose-phosphate aldolase [Cellvibrio gilvus ATCC 13127]
Length=226
Score = 244 bits (622), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 149/218 (69%), Positives = 170/218 (78%), Gaps = 6/218 (2%)
Query 8 AQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAAVTGF 67
A LA VDHTLLKPE TRADV ALVAEAAELG Y++C+SPS +PV V AG + VA V GF
Sbjct 9 AALAKFVDHTLLKPEATRADVEALVAEAAELGTYSICISPSFLPVEVPAG-LEVATVCGF 67
Query 68 PSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGA-VLK 126
PSGKH S VKA EAA ++A GA+E+DMVID+GAA G V++DI AVRAA VLK
Sbjct 68 PSGKHHSDVKAAEAARSVADGATEVDMVIDVGAAKEGRFADVQADIAAVRAAVPAPTVLK 127
Query 127 VIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGPRL 186
VI+ESA L + H +V+ CRAA AGADFVKTSTG HPAGGATV AV +MA+TVG RL
Sbjct 128 VIIESAAL----SDHEIVEVCRAAAAAGADFVKTSTGFHPAGGATVHAVRIMADTVGGRL 183
Query 187 GVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
GVKASGGIRT+ADA+AM+ AGATRLGLSGT AVL GL
Sbjct 184 GVKASGGIRTSADALAMIAAGATRLGLSGTAAVLAGLE 221
>gi|329945945|ref|ZP_08293632.1| deoxyribose-phosphate aldolase [Actinomyces sp. oral taxon 170
str. F0386]
gi|328528393|gb|EGF55371.1| deoxyribose-phosphate aldolase [Actinomyces sp. oral taxon 170
str. F0386]
Length=218
Score = 241 bits (614), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 138/219 (64%), Positives = 161/219 (74%), Gaps = 5/219 (2%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAAVT 65
TRAQ+A+LVDHTLLKPE T V ALV EAA LG Y+VCVSPS++P+ + + +A V
Sbjct 3 TRAQIASLVDHTLLKPEATATQVDALVVEAAALGAYSVCVSPSLLPLELP-DNLHLATVC 61
Query 66 GFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGAVL 125
GFPSG H +SVKA EAA A+ GA EIDMV+++ D DAV +DI VR A GAVL
Sbjct 62 GFPSGAHATSVKAAEAADAVVKGAEEIDMVVNLRLIKEDDFDAVEADIRGVREACRGAVL 121
Query 126 KVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGPR 185
KVI+ESA L +V +CRAAE AGADFVKTSTG HPAGGA+ AV LM TVG R
Sbjct 122 KVIIESAALTDGE----IVASCRAAEAAGADFVKTSTGFHPAGGASAHAVALMRATVGDR 177
Query 186 LGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
LGVKASGGIRTAADA+AM+ AGA RLGLS + AVL+GLS
Sbjct 178 LGVKASGGIRTAADALAMVEAGANRLGLSASAAVLEGLS 216
>gi|256378744|ref|YP_003102404.1| deoxyribose-phosphate aldolase [Actinosynnema mirum DSM 43827]
gi|255923047|gb|ACU38558.1| deoxyribose-phosphate aldolase [Actinosynnema mirum DSM 43827]
Length=221
Score = 241 bits (614), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 133/215 (62%), Positives = 160/215 (75%), Gaps = 5/215 (2%)
Query 9 QLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAG-GVRVAAVTGF 67
LA+++DHTLLKPE TRADVA V E ELG Y+VCVSP+M+P+ + G ++VAAV GF
Sbjct 3 DLASVIDHTLLKPEATRADVARFVQEGVELGAYSVCVSPNMLPLDLPEGASIKVAAVCGF 62
Query 68 PSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGAVLKV 127
PSGKH S++KA EA+ A+A GA EIDMVID+GAA+ G V +D+ AVR A GAVLKV
Sbjct 63 PSGKHASAIKALEASRAVAQGADEIDMVIDVGAAVEGRFADVEADVRAVREAVPGAVLKV 122
Query 128 IVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGPRLG 187
I+ESA L + +V C AA A ADFVKTSTG HP GGAT AV LMA TVGP +G
Sbjct 123 IIESAALTDEQ----IVAVCEAAVRAEADFVKTSTGFHPTGGATAHAVALMARTVGPNVG 178
Query 188 VKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDG 222
VKASGGIRTA A M+ AGATRLG+SGTRA+++G
Sbjct 179 VKASGGIRTAEAAREMIAAGATRLGVSGTRALVEG 213
>gi|256832070|ref|YP_003160797.1| deoxyribose-phosphate aldolase [Jonesia denitrificans DSM 20603]
gi|256685601|gb|ACV08494.1| deoxyribose-phosphate aldolase [Jonesia denitrificans DSM 20603]
Length=236
Score = 240 bits (612), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/220 (63%), Positives = 163/220 (75%), Gaps = 6/220 (2%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGG-VRVAAV 64
T A +A++VDHTLLKPE+T ADVAAL+ EA LGV+++CVSPS++PV + G ++VA V
Sbjct 6 TAASVASMVDHTLLKPESTPADVAALIDEAVSLGVFSICVSPSLLPVKIPEGSELKVATV 65
Query 65 TGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVR-AAAAGA 123
GFPSG H VKA E A A+ GA EIDMVI++GA GD + V DI AVR AA A
Sbjct 66 VGFPSGAHHPEVKAAETARAVTDGAHEIDMVINLGAVKSGDWELVERDIRAVRDAAPAPV 125
Query 124 VLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVG 183
VLKVI+ESA L + +V AC A+E AGADFVKTSTG H GGA+V AV LMA TVG
Sbjct 126 VLKVIIESAALTDEE----IVAACEASERAGADFVKTSTGFHSTGGASVHAVRLMAHTVG 181
Query 184 PRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
RLGVKASGGIRT A+AM++AGATRLGLSGT AVLDG+
Sbjct 182 QRLGVKASGGIRTGDAALAMISAGATRLGLSGTAAVLDGV 221
>gi|237785967|ref|YP_002906672.1| phosphomannomutase [Corynebacterium kroppenstedtii DSM 44385]
gi|237758879|gb|ACR18129.1| Phosphomannomutase [Corynebacterium kroppenstedtii DSM 44385]
Length=850
Score = 240 bits (612), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/220 (60%), Positives = 162/220 (74%), Gaps = 6/220 (2%)
Query 5 PTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAAV 64
P+R ++A++VDHTLLKPE+T +V L+ EA EL Y++CVSPSM+P+ V + VAAV
Sbjct 15 PSRDEVASIVDHTLLKPESTHHNVDELIHEAIELETYSICVSPSMLPITV-PDELHVAAV 73
Query 65 TGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVR-AAAAGA 123
GFPSG H S +KA EA A+ +GA EIDMVI++ AA GD V DI AVR A +
Sbjct 74 CGFPSGAHASEIKAEEARLAVNNGADEIDMVINLAAAAEGDWATVEKDIRAVRDAVPSPT 133
Query 124 VLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVG 183
VLKVI+E+A+L + +V AC AA++AGADFVKTSTG HP+GGA+ A+ LM ETVG
Sbjct 134 VLKVILETALLSDDA----IVAACNAAKNAGADFVKTSTGFHPSGGASAHAIRLMRETVG 189
Query 184 PRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
P +GVKASGGIRTA A+ M+ AGA RLGLSGTRAVLDGL
Sbjct 190 PDMGVKASGGIRTAEKALEMIAAGANRLGLSGTRAVLDGL 229
>gi|320532985|ref|ZP_08033736.1| deoxyribose-phosphate aldolase [Actinomyces sp. oral taxon 171
str. F0337]
gi|320134799|gb|EFW26996.1| deoxyribose-phosphate aldolase [Actinomyces sp. oral taxon 171
str. F0337]
Length=225
Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/218 (66%), Positives = 164/218 (76%), Gaps = 5/218 (2%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAAVT 65
TRAQ+A L+DHTLLKPETT A V AL+AEAA LG Y+VCVSPS++P+ V + VA V
Sbjct 11 TRAQIARLIDHTLLKPETTAAQVDALIAEAAALGTYSVCVSPSLLPLGVP-DTLHVATVC 69
Query 66 GFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGAVL 125
GFPSG H +SVKA EAA ALA GA EIDMV+++ GD +AV +DI VR A GAVL
Sbjct 70 GFPSGAHATSVKAAEAADALAKGAEEIDMVVNLRLVKEGDAEAVEADIRGVREACPGAVL 129
Query 126 KVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGPR 185
KVI+ESA L + +V CRAAE AGADFVKTSTG HPAGGA+ AV LM TVG R
Sbjct 130 KVIIESAALTDEE----IVSTCRAAEAAGADFVKTSTGFHPAGGASTHAVALMRATVGDR 185
Query 186 LGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
LGVKASGGIRTAADA+AM+ AGA RLGLS + AVL+GL
Sbjct 186 LGVKASGGIRTAADALAMVEAGANRLGLSASAAVLEGL 223
>gi|326774160|ref|ZP_08233442.1| deoxyribose-phosphate aldolase [Actinomyces viscosus C505]
gi|326636299|gb|EGE37203.1| deoxyribose-phosphate aldolase [Actinomyces viscosus C505]
Length=217
Score = 237 bits (605), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 140/219 (64%), Positives = 164/219 (75%), Gaps = 5/219 (2%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAAVT 65
TRA++A L+DHTLLKPE T A V AL+AEAA+L Y+VCVSPS++P+ V + VA V
Sbjct 3 TRARIARLIDHTLLKPEATTAQVDALIAEAADLNTYSVCVSPSLLPLEVP-DDLHVATVC 61
Query 66 GFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGAVL 125
GFPSG H +SVKA EAA ALA GA EIDMV+++ GD DAV +DI VR A GAVL
Sbjct 62 GFPSGAHATSVKAAEAADALAKGAEEIDMVVNLRLVKEGDADAVEADIRGVREACRGAVL 121
Query 126 KVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGPR 185
KVI+ESA L + +V CRAAE AGADFVKTSTG HPAGGA+ AV LM TVG R
Sbjct 122 KVIIESAALTDEE----IVSTCRAAEAAGADFVKTSTGFHPAGGASTHAVALMRATVGER 177
Query 186 LGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
LGVKASGGIRTAADA+AM+ AGA RLGLS + AVL+GL+
Sbjct 178 LGVKASGGIRTAADALAMVEAGANRLGLSASAAVLEGLA 216
>gi|312141141|ref|YP_004008477.1| deoxyribose-phosphate aldolase deoc [Rhodococcus equi 103S]
gi|311890480|emb|CBH49798.1| deoxyribose-phosphate aldolase DeoC [Rhodococcus equi 103S]
Length=226
Score = 237 bits (605), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 142/220 (65%), Positives = 170/220 (78%), Gaps = 6/220 (2%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPV-AVQAGGVRVAAV 64
R +A +VDHTLLKPE + AD ALVAEA +LGV AVCVSPSM+P+ + G + +A V
Sbjct 7 NRTFVAGMVDHTLLKPEASDADARALVAEAHDLGVLAVCVSPSMLPLRSADLGDLVLATV 66
Query 65 TGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVR-AAAAGA 123
GFPSGKH S +KA EA A+ GA+EIDMVID+GAA+ G+ +AV +DI AVR A
Sbjct 67 VGFPSGKHHSLIKATEARLAVDQGATEIDMVIDVGAAVAGEYNAVLADILAVRDAVGPEP 126
Query 124 VLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVG 183
VLKVIVESA L + +V+ CRAAE AGA+FVKTSTG HPAGGA+V+AV LMA+TVG
Sbjct 127 VLKVIVESAAL----SDDAIVETCRAAEQAGANFVKTSTGFHPAGGASVQAVRLMADTVG 182
Query 184 PRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
RLGVKASGGIRTA A+A+++AGATRLGLSGTRAVLDGL
Sbjct 183 GRLGVKASGGIRTADAALALIDAGATRLGLSGTRAVLDGL 222
>gi|343522186|ref|ZP_08759152.1| deoxyribose-phosphate aldolase [Actinomyces sp. oral taxon 175
str. F0384]
gi|343401595|gb|EGV14101.1| deoxyribose-phosphate aldolase [Actinomyces sp. oral taxon 175
str. F0384]
Length=217
Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/219 (64%), Positives = 165/219 (76%), Gaps = 5/219 (2%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAAVT 65
TR ++A L+DHTLLKPE T A V AL+AEAA+LG Y+VCVSPS++P+ V + VA V
Sbjct 3 TRDRIARLIDHTLLKPEATVAQVDALIAEAADLGTYSVCVSPSLLPLEVP-DALHVATVC 61
Query 66 GFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGAVL 125
GFPSG H +SVKA EAA ALA GA EIDMV+++ G IDAV +DI VR A GAVL
Sbjct 62 GFPSGAHATSVKAAEAADALAKGAEEIDMVVNLRLVKEGHIDAVEADIRGVREACRGAVL 121
Query 126 KVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGPR 185
KVI+ESA L + +V CRAAE AGADFVKTSTG HPAGGA+ AV LM TVG R
Sbjct 122 KVIIESAALTDEE----IVSTCRAAEAAGADFVKTSTGFHPAGGASTHAVALMRATVGER 177
Query 186 LGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
LGVKASGGIRTAADA+AM+ AGA+RLGLS + AVL+GL+
Sbjct 178 LGVKASGGIRTAADALAMVEAGASRLGLSASAAVLEGLN 216
>gi|227541220|ref|ZP_03971269.1| deoxyribose-phosphate aldolase [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227182993|gb|EEI63965.1| deoxyribose-phosphate aldolase [Corynebacterium glucuronolyticum
ATCC 51866]
Length=215
Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/219 (60%), Positives = 161/219 (74%), Gaps = 5/219 (2%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAAVT 65
R++LA L+DHTLLKPE+TRADV AL AEA LG Y++CVSPSM+PV V V+VA V
Sbjct 2 NRSELAQLIDHTLLKPESTRADVLALAAEAESLGTYSICVSPSMLPVDVPPT-VKVATVI 60
Query 66 GFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGAVL 125
GFPSG ++VK EA A+A GA E+DMV +IG A D + +I AV+ A +L
Sbjct 61 GFPSGAVKTAVKVAEARQAVADGADEVDMVQNIGWAKEHRFDEIADEIAAVKGACGSVLL 120
Query 126 KVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGPR 185
KVI+E+A L + +V+ C+AAE AGADFVKTSTG HPAGGA+V AV LM ETVG R
Sbjct 121 KVILETAALTDEE----IVECCKAAEKAGADFVKTSTGFHPAGGASVHAVSLMKETVGDR 176
Query 186 LGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
LGVKASGGIR A A+AM++AGATRLGLS ++AVLDGL+
Sbjct 177 LGVKASGGIRDAETALAMVSAGATRLGLSSSKAVLDGLA 215
>gi|262200788|ref|YP_003271996.1| deoxyribose-phosphate aldolase [Gordonia bronchialis DSM 43247]
gi|262084135|gb|ACY20103.1| deoxyribose-phosphate aldolase [Gordonia bronchialis DSM 43247]
Length=225
Score = 236 bits (603), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 137/218 (63%), Positives = 160/218 (74%), Gaps = 3/218 (1%)
Query 7 RAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAAVTG 66
R +AA++DHTLLKPE T ADV A +AEAA+LGVYAVCVSPSM+PV AG R V G
Sbjct 8 RGDVAAIIDHTLLKPEATHADVQATLAEAADLGVYAVCVSPSMLPV--DAGTQRTCVVAG 65
Query 67 FPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAG-AVL 125
FPSGKH S VKA EA A+ +GA EIDMVID+GAA+ G D V +DI VR A A A+L
Sbjct 66 FPSGKHHSLVKAAEARLAVDTGADEIDMVIDVGAAVDGRFDEVFADILTVREAVADDALL 125
Query 126 KVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGPR 185
KVI+ESA LL + + + CR A DAGA +VKTSTG HPAGGA+VRAVELM VG
Sbjct 126 KVIIESAALLELAGPDAVTEVCRRAVDAGAAYVKTSTGFHPAGGASVRAVELMRAAVGDT 185
Query 186 LGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
+GVKASGGIRTA A ++ AGA+RLGLS +RAVLDG
Sbjct 186 VGVKASGGIRTAEFAEELIVAGASRLGLSASRAVLDGF 223
>gi|54027177|ref|YP_121419.1| deoxyribose-phosphate aldolase [Nocardia farcinica IFM 10152]
gi|81373070|sp|Q5YP36.1|DEOC_NOCFA RecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; AltName:
Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase;
Short=Deoxyriboaldolase
gi|54018685|dbj|BAD60055.1| putative deoxyribose-phosphate aldolase [Nocardia farcinica IFM
10152]
Length=222
Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/220 (66%), Positives = 168/220 (77%), Gaps = 7/220 (3%)
Query 5 PTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAAV 64
PTRA++AA +DHTLL PE T DVAALVAEA +LGVYAVCVSPSM+PV +A G+ VA V
Sbjct 7 PTRAEVAARIDHTLLAPEATDDDVAALVAEARDLGVYAVCVSPSMLPV--RAPGLVVATV 64
Query 65 TGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAG-A 123
GFPSGKH S VK EA A+ GA+E+DMVID+GAA G+ AV +DI VR A + A
Sbjct 65 AGFPSGKHHSLVKGAEARLAVDQGAAEVDMVIDVGAARAGEYSAVLADIVTVREAISDRA 124
Query 124 VLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVG 183
VLKVI+ESA L ++ +V+ CR AE AGADFVKTSTG HPAGGA+V AV LMAETVG
Sbjct 125 VLKVIIESAALSDEA----IVEVCRVAERAGADFVKTSTGFHPAGGASVHAVRLMAETVG 180
Query 184 PRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
RLG+KASGGIRTAA A +L AGATRLGLS + AVLDG
Sbjct 181 GRLGIKASGGIRTAAAAAELLAAGATRLGLSKSAAVLDGF 220
>gi|325674037|ref|ZP_08153727.1| deoxyribose-phosphate aldolase [Rhodococcus equi ATCC 33707]
gi|325555302|gb|EGD24974.1| deoxyribose-phosphate aldolase [Rhodococcus equi ATCC 33707]
Length=226
Score = 235 bits (599), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 142/220 (65%), Positives = 168/220 (77%), Gaps = 6/220 (2%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPV-AVQAGGVRVAAV 64
R +A +VDHTLLKPE + AD ALVAEA +LGV AVCVSPSM+P+ + G + +A V
Sbjct 7 NRTFVAGMVDHTLLKPEASDADARALVAEAHDLGVLAVCVSPSMLPLRSADLGDLVLATV 66
Query 65 TGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVR-AAAAGA 123
GFPSGKH S +KA EA A+ GA+EIDMVID+GAA+ G+ +AV +DI AVR A
Sbjct 67 VGFPSGKHHSLIKATEARLAVDQGATEIDMVIDVGAAVAGEYNAVLADILAVRDAVGPEP 126
Query 124 VLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVG 183
VLKVIVESA L + +V+ CRAAE AGA+FVKTSTG HPAGGA+V AV LMA TVG
Sbjct 127 VLKVIVESAAL----SDDAIVETCRAAEQAGANFVKTSTGFHPAGGASVHAVRLMAATVG 182
Query 184 PRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
RLGVKASGGIRTA A+A+++AGATRLGLSGTRAVLDGL
Sbjct 183 GRLGVKASGGIRTADAALALIDAGATRLGLSGTRAVLDGL 222
>gi|296128883|ref|YP_003636133.1| deoxyribose-phosphate aldolase [Cellulomonas flavigena DSM 20109]
gi|296020698|gb|ADG73934.1| deoxyribose-phosphate aldolase [Cellulomonas flavigena DSM 20109]
Length=238
Score = 234 bits (598), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 146/221 (67%), Positives = 163/221 (74%), Gaps = 10/221 (4%)
Query 10 LAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAG-----GVRVAAV 64
LA LVDHTLLKPE TRADV ALVAE LG Y+VCVSPS +P+ V G + VA V
Sbjct 17 LARLVDHTLLKPEATRADVEALVAEGVRLGAYSVCVSPSFLPLEVPVGLDGEPDLLVATV 76
Query 65 TGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVR-AAAAGA 123
GFPSGKH S VKA EAA A+ GA E+DMVID+GAA G V +DI AVR A A
Sbjct 77 CGFPSGKHHSEVKAAEAARAVRDGAHEVDMVIDVGAAKEGRFADVAADIAAVRDAVPAPT 136
Query 124 VLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVG 183
VLKVI+ESA L + +V+ CRAAE +GADFVKTSTG HPAGGA+V AV LMA TVG
Sbjct 137 VLKVIIESAAL----SDDEIVEVCRAAEASGADFVKTSTGFHPAGGASVHAVRLMARTVG 192
Query 184 PRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
RLGVKASGG+RTAADAVAM+ AGATRLGLSGT AVL GL+
Sbjct 193 GRLGVKASGGVRTAADAVAMVEAGATRLGLSGTAAVLAGLT 233
>gi|269795849|ref|YP_003315304.1| deoxyribose-phosphate aldolase [Sanguibacter keddieii DSM 10542]
gi|269098034|gb|ACZ22470.1| deoxyribose-phosphate aldolase [Sanguibacter keddieii DSM 10542]
Length=240
Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/220 (66%), Positives = 171/220 (78%), Gaps = 6/220 (2%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGG-VRVAAV 64
+R +LA VDHTLLKPE+T ADVAAL EA+ LG Y++C+SPS +P+A+ AG V++A V
Sbjct 7 SREELAQYVDHTLLKPESTDADVAALAEEASALGTYSICISPSKLPIALPAGSTVKIATV 66
Query 65 TGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAG-A 123
GFPSG H + VKA EAA A+ GA E+DMVI++GA GD V++DIEAVRAAAA
Sbjct 67 CGFPSGSHHAEVKAAEAAHAVLDGAHEVDMVINLGAVKSGDWAQVQADIEAVRAAAAHPT 126
Query 124 VLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVG 183
VLKVI+ESA L +V AC A+E AGADFVKTSTG HPAGGA+V AVELMA TVG
Sbjct 127 VLKVIIESAALTDDE----IVKACEASEAAGADFVKTSTGFHPAGGASVHAVELMARTVG 182
Query 184 PRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
RLGVKASGG+RTAADA+AM+ AGATRLGLSGT AVLDGL
Sbjct 183 GRLGVKASGGVRTAADALAMIAAGATRLGLSGTAAVLDGL 222
>gi|227487492|ref|ZP_03917808.1| deoxyribose-phosphate aldolase [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227092474|gb|EEI27786.1| deoxyribose-phosphate aldolase [Corynebacterium glucuronolyticum
ATCC 51867]
Length=215
Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/218 (61%), Positives = 157/218 (73%), Gaps = 5/218 (2%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAAVT 65
R++LA L+DHTLLKPE+TRADV AL AEA LG Y++CVSPSM+PV V V+VA V
Sbjct 2 NRSELAQLIDHTLLKPESTRADVLALAAEAESLGTYSICVSPSMLPVDVPPT-VKVATVI 60
Query 66 GFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGAVL 125
GFPSG ++VK EA A+A GA E+DMV +IG A D + +I AV+ A +L
Sbjct 61 GFPSGAVKTAVKVAEARQAVADGADEVDMVQNIGWAKEHRFDEIADEIAAVKGACGSVLL 120
Query 126 KVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGPR 185
KVI+E+A L +V C AAE AGADFVKTSTG HPAGGA+V AV LM ETVG R
Sbjct 121 KVILETAALTDSE----IVACCEAAEKAGADFVKTSTGFHPAGGASVHAVSLMKETVGDR 176
Query 186 LGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
LGVKASGGIR A A+AM++AGATRLGLS ++AVLDGL
Sbjct 177 LGVKASGGIRDAETALAMVSAGATRLGLSSSKAVLDGL 214
>gi|326384033|ref|ZP_08205716.1| deoxyribose-phosphate aldolase [Gordonia neofelifaecis NRRL B-59395]
gi|326197193|gb|EGD54384.1| deoxyribose-phosphate aldolase [Gordonia neofelifaecis NRRL B-59395]
Length=225
Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 130/219 (60%), Positives = 154/219 (71%), Gaps = 3/219 (1%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAAVT 65
TRA +AA+VDHTLLKPE TRAD A VAE LG Y++C+SPSM+P+ G + V
Sbjct 7 TRAAVAAMVDHTLLKPEATRADAEATVAEGLRLGAYSICLSPSMLPI--DTGAAKTCVVA 64
Query 66 GFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAA-GAV 124
GFPSGKH S VKA EA A+ +GA E+DMVID+GAA+ G D V +D+ VR A V
Sbjct 65 GFPSGKHHSLVKAAEARLAVDTGADEVDMVIDVGAAVDGRYDEVFADVLTVREAVGRDVV 124
Query 125 LKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGP 184
LKVIVESAVLL + L CR A +AGADFVKTSTG HPAGGA+VRA+E+M VGP
Sbjct 125 LKVIVESAVLLDAAGEDCLTQVCRRAAEAGADFVKTSTGFHPAGGASVRAIEVMRAAVGP 184
Query 185 RLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
+ +KASGGIRTA A ++ AGA RLGLSGTR VL G
Sbjct 185 NVRIKASGGIRTAEFAAELIAAGADRLGLSGTRTVLAGF 223
>gi|325068238|ref|ZP_08126911.1| deoxyribose-phosphate aldolase [Actinomyces oris K20]
Length=217
Score = 231 bits (590), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 140/219 (64%), Positives = 164/219 (75%), Gaps = 5/219 (2%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAAVT 65
TRA++A L+DHTLLKPE T A V AL+AEAA+L Y+VCVSPS++PV V + VA V
Sbjct 3 TRARIARLIDHTLLKPEATTAQVNALIAEAADLNTYSVCVSPSLLPVDVP-DDLHVATVC 61
Query 66 GFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGAVL 125
GFPSG H ++VKA EAA ALA GA EIDMV+++ GD DAV +DI VR A GAVL
Sbjct 62 GFPSGAHATAVKAAEAADALAKGAEEIDMVVNLRLVKEGDADAVEADIHGVREACRGAVL 121
Query 126 KVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGPR 185
KVI+ESA L + +V CRAAE AGADFVKTSTG HPAGGA+ AV LM TVG R
Sbjct 122 KVIIESAALTDEE----IVSTCRAAEAAGADFVKTSTGFHPAGGASTHAVALMRATVGER 177
Query 186 LGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
LGVKASGGIRTAADA+AM+ AGA RLGLS + AVL+GL+
Sbjct 178 LGVKASGGIRTAADALAMVEAGANRLGLSASAAVLEGLA 216
>gi|333918289|ref|YP_004491870.1| deoxyribose-phosphate aldolase [Amycolicicoccus subflavus DQS3-9A1]
gi|333480510|gb|AEF39070.1| Deoxyribose-phosphate aldolase [Amycolicicoccus subflavus DQS3-9A1]
Length=222
Score = 231 bits (589), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 137/220 (63%), Positives = 164/220 (75%), Gaps = 7/220 (3%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAAVT 65
TR+++A+++DHTLLKPE T DV AL++EA ELGV A+CVSPSM+PV +A G+ VA V
Sbjct 8 TRSRVASMIDHTLLKPEATTNDVDALISEAQELGVLAICVSPSMLPV--KAEGLVVATVA 65
Query 66 GFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAA-GAV 124
GFPSGKH S VK EA A+ +GA E+DMVID+G AL GD DAV DI VR A V
Sbjct 66 GFPSGKHQSLVKGVEARMAVEAGAVEVDMVIDVGRALAGDFDAVLQDILIVREAVGMKTV 125
Query 125 LKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGP 184
LKVI+ESA L ++ +V C A AGADFVKTSTG HPAGGATV A+ELMA+TVG
Sbjct 126 LKVIIESAALPDEA----VVRVCEVARTAGADFVKTSTGFHPAGGATVHAIELMAQTVGG 181
Query 185 RLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
+LG+KASGGIRTA A AM+ AGATRLGLS +R VLDG +
Sbjct 182 QLGIKASGGIRTAEAAQAMIAAGATRLGLSSSRGVLDGFA 221
>gi|260907497|ref|ZP_05915819.1| Deoxyribose-phosphate aldolase [Brevibacterium linens BL2]
Length=216
Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 131/219 (60%), Positives = 161/219 (74%), Gaps = 5/219 (2%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAAVT 65
+R+ +AA++DHTLLKPE T ADV ALV+EA ELGV A+CVSPSM+PV + G + VA V
Sbjct 3 SRSDVAAIIDHTLLKPEATPADVEALVSEAKELGVLAICVSPSMLPV-TEPGELVVATVV 61
Query 66 GFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGAVL 125
GFPSG+ +KA EAA A++ GA+E+DMVI+IG A+ GD DAV +DI V A+ A++
Sbjct 62 GFPSGQVKPEIKAAEAARAVSDGAAEVDMVINIGQAIAGDFDAVEADIRGVVDASGSALV 121
Query 126 KVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGPR 185
KVI+ESA L + +VDAC AE AGA FVKTSTG HPAGGA+ AV LM ETVG R
Sbjct 122 KVIIESAAL----SDEQIVDACARAETAGAGFVKTSTGFHPAGGASAHAVALMRETVGDR 177
Query 186 LGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
LGVKASGGIRT A M+ AGA+RLGLSG+ +L LS
Sbjct 178 LGVKASGGIRTVDAAEEMIAAGASRLGLSGSAGILAELS 216
>gi|23009149|ref|ZP_00050306.1| COG0274: Deoxyribose-phosphate aldolase [Magnetospirillum magnetotacticum
MS-1]
Length=241
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/225 (65%), Positives = 165/225 (74%), Gaps = 9/225 (4%)
Query 4 QPTRAQ-LAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPV---AVQAGGV 59
QP A LA VDHTLLKPE T ADVAALV E LGVY+VCVSPSM+P+ + G+
Sbjct 8 QPLDASGLARFVDHTLLKPEATPADVAALVEEGVRLGVYSVCVSPSMLPLDPATTRERGL 67
Query 60 RVAAVTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAA 119
VA V GFPSGKH S VKA EAA ++ GA E+DMVID+GAA G DAVR D+ AVRAA
Sbjct 68 LVATVCGFPSGKHHSDVKAFEAARSVRDGADEVDMVIDVGAAKAGAWDAVRDDVAAVRAA 127
Query 120 AAGA-VLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELM 178
VLKVI+ESA L H +V+ACRA+E AGADFVKTSTG HPAGGA+ AV +M
Sbjct 128 VPADRVLKVIIESAAL----TDHEIVEACRASEAAGADFVKTSTGFHPAGGASTHAVSIM 183
Query 179 AETVGPRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGL 223
AETVG RLGVKASGG+RT ADA+AM+ GATRLGLSGT AVL G
Sbjct 184 AETVGGRLGVKASGGVRTLADALAMIEHGATRLGLSGTAAVLAGF 228
>gi|227494895|ref|ZP_03925211.1| deoxyribose-phosphate aldolase [Actinomyces coleocanis DSM 15436]
gi|226831347|gb|EEH63730.1| deoxyribose-phosphate aldolase [Actinomyces coleocanis DSM 15436]
Length=215
Score = 227 bits (579), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 127/219 (58%), Positives = 159/219 (73%), Gaps = 5/219 (2%)
Query 6 TRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVAVQAGGVRVAAVT 65
+A++A L+DHT+LKPE T ADV ++ EAA+LG ++VCVSP+ +PV+ V VA V
Sbjct 2 NKAEVAKLIDHTILKPEATAADVQRVIDEAADLGTFSVCVSPNQLPVSTP-DHVAVATVC 60
Query 66 GFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGAVL 125
GFPSG H VKA EAA ++A GA E+DMV+++ G+ D V +DI AVR A GA+L
Sbjct 61 GFPSGAHHKEVKAAEAAQSVALGADEVDMVVNLKLVKEGEWDEVEADIRAVRDAIPGALL 120
Query 126 KVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGPR 185
KVI+ESA L + +V C A+E AGADFVKTSTG HPAGGA+V AV LM +TVG R
Sbjct 121 KVIIESAALTDEE----IVACCEASERAGADFVKTSTGFHPAGGASVHAVALMRKTVGDR 176
Query 186 LGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS 224
LGVKASGGIRTAADAVAM+ AGA RLGLS + A+L L+
Sbjct 177 LGVKASGGIRTAADAVAMIEAGANRLGLSASAAILADLA 215
Lambda K H
0.316 0.129 0.353
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 286119069840
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40