BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0479c Length=348 Score E Sequences producing significant alignments: (Bits) Value gi|15607620|ref|NP_214993.1| hypothetical protein Rv0479c [Mycob... 704 0.0 gi|289441861|ref|ZP_06431605.1| conserved membrane protein [Myco... 702 0.0 gi|289573066|ref|ZP_06453293.1| conserved membrane protein [Myco... 702 0.0 gi|340625505|ref|YP_004743957.1| hypothetical protein MCAN_04791... 696 0.0 gi|289744186|ref|ZP_06503564.1| conserved hypothetical protein [... 604 6e-171 gi|339293527|gb|AEJ45638.1| hypothetical protein CCDC5079_0448 [... 502 3e-140 gi|183980828|ref|YP_001849119.1| hypothetical protein MMAR_0804 ... 485 6e-135 gi|289744187|ref|ZP_06503565.1| conserved hypothetical protein [... 475 4e-132 gi|118619642|ref|YP_907974.1| hypothetical protein MUL_4547 [Myc... 432 3e-119 gi|41410070|ref|NP_962906.1| hypothetical protein MAP3972c [Myco... 408 9e-112 gi|118466216|ref|YP_883799.1| hypothetical protein MAV_4671 [Myc... 404 9e-111 gi|296168081|ref|ZP_06850147.1| conserved hypothetical protein [... 387 2e-105 gi|254819807|ref|ZP_05224808.1| hypothetical protein MintA_07779... 384 1e-104 gi|254777108|ref|ZP_05218624.1| hypothetical protein MaviaA2_209... 382 4e-104 gi|342859019|ref|ZP_08715673.1| hypothetical protein MCOL_09083 ... 382 6e-104 gi|336460413|gb|EGO39311.1| hypothetical protein MAPs_40770 [Myc... 381 7e-104 gi|240169862|ref|ZP_04748521.1| hypothetical protein MkanA1_1114... 367 1e-99 gi|15828325|ref|NP_302588.1| hypothetical protein ML2450 [Mycoba... 362 4e-98 gi|120401827|ref|YP_951656.1| hypothetical protein Mvan_0812 [My... 264 2e-68 gi|333989108|ref|YP_004521722.1| hypothetical protein JDM601_046... 261 2e-67 gi|296164616|ref|ZP_06847183.1| conserved hypothetical protein [... 260 3e-67 gi|118469907|ref|YP_885326.1| hypothetical protein MSMEG_0923 [M... 258 7e-67 gi|145220702|ref|YP_001131380.1| hypothetical protein Mflv_0096 ... 250 3e-64 gi|108797627|ref|YP_637824.1| hypothetical protein Mmcs_0647 [My... 246 3e-63 gi|8439570|gb|AAF74996.1|AF143402_1 putative multicopper oxidase... 237 2e-60 gi|333989107|ref|YP_004521721.1| hypothetical protein JDM601_046... 226 5e-57 gi|118473918|ref|YP_886468.1| hypothetical protein MSMEG_2110 [M... 216 4e-54 gi|120402920|ref|YP_952749.1| hypothetical protein Mvan_1923 [My... 199 5e-49 gi|315445385|ref|YP_004078264.1| hypothetical protein Mspyr1_383... 198 1e-48 gi|145225014|ref|YP_001135692.1| hypothetical protein Mflv_4435 ... 197 2e-48 gi|169631155|ref|YP_001704804.1| hypothetical protein MAB_4077 [... 139 8e-31 gi|111019086|ref|YP_702058.1| hypothetical protein RHA1_ro02093 ... 102 1e-19 gi|226361178|ref|YP_002778956.1| hypothetical protein ROP_17640 ... 99.0 1e-18 gi|54027176|ref|YP_121418.1| hypothetical protein nfa52020 [Noca... 97.1 4e-18 gi|226305083|ref|YP_002765041.1| hypothetical protein RER_15940 ... 87.0 4e-15 gi|312141140|ref|YP_004008476.1| hypothetical protein REQ_38090 ... 86.3 8e-15 gi|229490187|ref|ZP_04384034.1| putative secreted protein [Rhodo... 84.0 4e-14 gi|333918290|ref|YP_004491871.1| hypothetical protein AS9A_0617 ... 83.6 5e-14 gi|343925762|ref|ZP_08765277.1| hypothetical protein GOALK_050_0... 50.1 5e-04 gi|319948847|ref|ZP_08022962.1| hypothetical protein ES5_05650 [... 48.9 0.001 gi|326384034|ref|ZP_08205717.1| hypothetical protein SCNU_13914 ... 47.0 0.005 gi|172039888|ref|YP_001799602.1| hypothetical protein cur_0208 [... 46.6 0.006 gi|317508732|ref|ZP_07966385.1| hypothetical protein HMPREF9336_... 46.6 0.007 gi|38232994|ref|NP_938761.1| hypothetical protein DIP0378 [Coryn... 45.1 0.018 gi|227505616|ref|ZP_03935665.1| conserved hypothetical protein [... 40.0 0.51 gi|296393896|ref|YP_003658780.1| hypothetical protein Srot_1486 ... 37.4 3.8 >gi|15607620|ref|NP_214993.1| hypothetical protein Rv0479c [Mycobacterium tuberculosis H37Rv] gi|15839869|ref|NP_334906.1| hypothetical protein MT0497 [Mycobacterium tuberculosis CDC1551] gi|31791659|ref|NP_854152.1| hypothetical protein Mb0489c [Mycobacterium bovis AF2122/97] 68 more sequence titles Length=348 Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/348 (99%), Positives = 348/348 (100%), Gaps = 0/348 (0%) Query 1 VTNPQGPPNDPSPWARPGDQGPLARPPASSEASTGRLRPGEPAGHIQEPVSPPTQPEQQP 60 +TNPQGPPNDPSPWARPGDQGPLARPPASSEASTGRLRPGEPAGHIQEPVSPPTQPEQQP Sbjct 1 MTNPQGPPNDPSPWARPGDQGPLARPPASSEASTGRLRPGEPAGHIQEPVSPPTQPEQQP 60 Query 61 QTEHLAASHAHTRRSGRQAAHQAWDPTGLLAAQEEEPAAVKTKRRARRDPLTVFLVLIIV 120 QTEHLAASHAHTRRSGRQAAHQAWDPTGLLAAQEEEPAAVKTKRRARRDPLTVFLVLIIV Sbjct 61 QTEHLAASHAHTRRSGRQAAHQAWDPTGLLAAQEEEPAAVKTKRRARRDPLTVFLVLIIV 120 Query 121 FSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVE 180 FSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVE Sbjct 121 FSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVE 180 Query 181 TAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGA 240 TAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGA Sbjct 181 TAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGA 240 Query 241 FVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNE 300 FVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNE Sbjct 241 FVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNE 300 Query 301 FTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI 348 FTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI Sbjct 301 FTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI 348 >gi|289441861|ref|ZP_06431605.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289568399|ref|ZP_06448626.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289748969|ref|ZP_06508347.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289752511|ref|ZP_06511889.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289414780|gb|EFD12020.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289542152|gb|EFD45801.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289689556|gb|EFD56985.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289693098|gb|EFD60527.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length=348 Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/348 (99%), Positives = 347/348 (99%), Gaps = 0/348 (0%) Query 1 VTNPQGPPNDPSPWARPGDQGPLARPPASSEASTGRLRPGEPAGHIQEPVSPPTQPEQQP 60 +TNPQGPPNDPSPWARPGDQGPLARPPASSEASTGRLRPGEPAGHIQEPVSPPTQPEQQP Sbjct 1 MTNPQGPPNDPSPWARPGDQGPLARPPASSEASTGRLRPGEPAGHIQEPVSPPTQPEQQP 60 Query 61 QTEHLAASHAHTRRSGRQAAHQAWDPTGLLAAQEEEPAAVKTKRRARRDPLTVFLVLIIV 120 QTEHLAASHAHTRRSGRQAAHQAWDPTGLLA QEEEPAAVKTKRRARRDPLTVFLVLIIV Sbjct 61 QTEHLAASHAHTRRSGRQAAHQAWDPTGLLAEQEEEPAAVKTKRRARRDPLTVFLVLIIV 120 Query 121 FSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVE 180 FSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVE Sbjct 121 FSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVE 180 Query 181 TAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGA 240 TAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGA Sbjct 181 TAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGA 240 Query 241 FVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNE 300 FVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNE Sbjct 241 FVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNE 300 Query 301 FTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI 348 FTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI Sbjct 301 FTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI 348 >gi|289573066|ref|ZP_06453293.1| conserved membrane protein [Mycobacterium tuberculosis K85] gi|289537497|gb|EFD42075.1| conserved membrane protein [Mycobacterium tuberculosis K85] Length=348 Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/348 (99%), Positives = 347/348 (99%), Gaps = 0/348 (0%) Query 1 VTNPQGPPNDPSPWARPGDQGPLARPPASSEASTGRLRPGEPAGHIQEPVSPPTQPEQQP 60 +TNPQGPPNDPSPWARPGDQGPLARPPASSEASTGRLRPGEPAGHIQEPVSPPTQPEQQP Sbjct 1 MTNPQGPPNDPSPWARPGDQGPLARPPASSEASTGRLRPGEPAGHIQEPVSPPTQPEQQP 60 Query 61 QTEHLAASHAHTRRSGRQAAHQAWDPTGLLAAQEEEPAAVKTKRRARRDPLTVFLVLIIV 120 QTEHLAASHA TRRSGRQAAHQAWDPTGLLAAQEEEPAAVKTKRRARRDPLTVFLVLIIV Sbjct 61 QTEHLAASHARTRRSGRQAAHQAWDPTGLLAAQEEEPAAVKTKRRARRDPLTVFLVLIIV 120 Query 121 FSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVE 180 FSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVE Sbjct 121 FSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVE 180 Query 181 TAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGA 240 TAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGA Sbjct 181 TAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGA 240 Query 241 FVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNE 300 FVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNE Sbjct 241 FVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNE 300 Query 301 FTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI 348 FTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI Sbjct 301 FTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI 348 >gi|340625505|ref|YP_004743957.1| hypothetical protein MCAN_04791 [Mycobacterium canettii CIPT 140010059] gi|340003695|emb|CCC42819.1| putative conserved membrane protein [Mycobacterium canettii CIPT 140010059] Length=350 Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/350 (99%), Positives = 347/350 (99%), Gaps = 2/350 (0%) Query 1 VTNPQGPPNDPSPWARPGDQGPLARPPASSEASTGRLRPGEPAGHIQEPVSPPTQPEQQP 60 +TNPQGPP DPSPWARPGDQGPLARPPASSEASTGRLRPGEPAGHIQEPVSPPTQPEQQP Sbjct 1 MTNPQGPPYDPSPWARPGDQGPLARPPASSEASTGRLRPGEPAGHIQEPVSPPTQPEQQP 60 Query 61 --QTEHLAASHAHTRRSGRQAAHQAWDPTGLLAAQEEEPAAVKTKRRARRDPLTVFLVLI 118 QTEHLAASHAHTRRSGRQAAHQAWDPTGLLAAQEEEPAAVKTKRRARRDPLTVFLVLI Sbjct 61 EPQTEHLAASHAHTRRSGRQAAHQAWDPTGLLAAQEEEPAAVKTKRRARRDPLTVFLVLI 120 Query 119 IVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNIS 178 IVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNIS Sbjct 121 IVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNIS 180 Query 179 VETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPIL 238 VETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPIL Sbjct 181 VETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPIL 240 Query 239 GAFVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTL 298 GAFVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTL Sbjct 241 GAFVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTL 300 Query 299 NEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI 348 NEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI Sbjct 301 NEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI 350 >gi|289744186|ref|ZP_06503564.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289684714|gb|EFD52202.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] Length=299 Score = 604 bits (1558), Expect = 6e-171, Method: Compositional matrix adjust. Identities = 298/299 (99%), Positives = 299/299 (100%), Gaps = 0/299 (0%) Query 50 VSPPTQPEQQPQTEHLAASHAHTRRSGRQAAHQAWDPTGLLAAQEEEPAAVKTKRRARRD 109 +SPPTQPEQQPQTEHLAASHAHTRRSGRQAAHQAWDPTGLLAAQEEEPAAVKTKRRARRD Sbjct 1 MSPPTQPEQQPQTEHLAASHAHTRRSGRQAAHQAWDPTGLLAAQEEEPAAVKTKRRARRD 60 Query 110 PLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQV 169 PLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQV Sbjct 61 PLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQV 120 Query 170 ATRHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKE 229 ATRHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKE Sbjct 121 ATRHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKE 180 Query 230 SVQNAIPILGAFVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSL 289 SVQNAIPILGAFVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSL Sbjct 181 SVQNAIPILGAFVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSL 240 Query 290 PKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI 348 PKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI Sbjct 241 PKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI 299 >gi|339293527|gb|AEJ45638.1| hypothetical protein CCDC5079_0448 [Mycobacterium tuberculosis CCDC5079] gi|339297168|gb|AEJ49278.1| hypothetical protein CCDC5180_0441 [Mycobacterium tuberculosis CCDC5180] Length=249 Score = 502 bits (1293), Expect = 3e-140, Method: Compositional matrix adjust. Identities = 248/249 (99%), Positives = 249/249 (100%), Gaps = 0/249 (0%) Query 100 VKTKRRARRDPLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASF 159 +KTKRRARRDPLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASF Sbjct 1 MKTKRRARRDPLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASF 60 Query 160 GVAPLLLWQVATRHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDAT 219 GVAPLLLWQVATRHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDAT Sbjct 61 GVAPLLLWQVATRHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDAT 120 Query 220 ITWSSEGIKESVQNAIPILGAFVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQI 279 ITWSSEGIKESVQNAIPILGAFVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQI Sbjct 121 ITWSSEGIKESVQNAIPILGAFVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQI 180 Query 280 INFNTLGFSLPKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTG 339 INFNTLGFSLPKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTG Sbjct 181 INFNTLGFSLPKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTG 240 Query 340 IQNPCFSHI 348 IQNPCFSHI Sbjct 241 IQNPCFSHI 249 >gi|183980828|ref|YP_001849119.1| hypothetical protein MMAR_0804 [Mycobacterium marinum M] gi|183174154|gb|ACC39264.1| conserved membrane protein [Mycobacterium marinum M] Length=348 Score = 485 bits (1248), Expect = 6e-135, Method: Compositional matrix adjust. Identities = 244/351 (70%), Positives = 292/351 (84%), Gaps = 6/351 (1%) Query 1 VTNPQGPPND-PSPWARPGDQGPLARPPASSEASTGRLRPGEPAGHIQEPVSPPTQPEQQ 59 +TNPQGPPN+ PS W+RP +QGPL RPP+ + S G R GEPA QEP PT Sbjct 1 MTNPQGPPNEGPSTWSRPSNQGPLGRPPSPVDPSGGPFRSGEPANPQQEP---PTMAGIG 57 Query 60 PQ-TEHLAASHAHTRR-SGRQAAHQAWDPTGLLAAQEEEPAAVKTKRRARRDPLTVFLVL 117 PQ TE +AAS+A +RR + T +A EEEP A KRR+RRDPL++FL+L Sbjct 58 PQQTEPIAASNADSRRPESTSPPASSASKTTSVATPEEEPLAGTRKRRSRRDPLSIFLIL 117 Query 118 IIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNI 177 IIVFSLVLAG+I ELYARHVAN KVA AVAC VKD+ATASFGVAPLLLWQ+ATRHFTNI Sbjct 118 IIVFSLVLAGVIASELYARHVANGKVAAAVACEVKDKATASFGVAPLLLWQLATRHFTNI 177 Query 178 SVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPI 237 +VETAGNQ+RDAKGM+++++IQ+V LK+TPNS GT+GALDATI+W+S+GIKESVQNAIPI Sbjct 178 TVETAGNQVRDAKGMKLRISIQDVHLKSTPNSAGTLGALDATISWTSDGIKESVQNAIPI 237 Query 238 LGAFVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQST 297 LG FVT+SVVTHPADGT+ELKG+LN+I A+P+V+GKGLELQI++FNTLGFSLPKE VQST Sbjct 238 LGEFVTNSVVTHPADGTIELKGMLNDIIARPVVSGKGLELQIVSFNTLGFSLPKEAVQST 297 Query 298 LNEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI 348 LN+FT+ LT+NYPLGIHADSVQVT+TGVVS FSTR+A IPTG QNPCF+++ Sbjct 298 LNDFTADLTRNYPLGIHADSVQVTTTGVVSHFSTRNATIPTGSQNPCFANL 348 >gi|289744187|ref|ZP_06503565.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289684715|gb|EFD52203.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] Length=237 Score = 475 bits (1223), Expect = 4e-132, Method: Compositional matrix adjust. Identities = 234/234 (100%), Positives = 234/234 (100%), Gaps = 0/234 (0%) Query 1 VTNPQGPPNDPSPWARPGDQGPLARPPASSEASTGRLRPGEPAGHIQEPVSPPTQPEQQP 60 VTNPQGPPNDPSPWARPGDQGPLARPPASSEASTGRLRPGEPAGHIQEPVSPPTQPEQQP Sbjct 4 VTNPQGPPNDPSPWARPGDQGPLARPPASSEASTGRLRPGEPAGHIQEPVSPPTQPEQQP 63 Query 61 QTEHLAASHAHTRRSGRQAAHQAWDPTGLLAAQEEEPAAVKTKRRARRDPLTVFLVLIIV 120 QTEHLAASHAHTRRSGRQAAHQAWDPTGLLAAQEEEPAAVKTKRRARRDPLTVFLVLIIV Sbjct 64 QTEHLAASHAHTRRSGRQAAHQAWDPTGLLAAQEEEPAAVKTKRRARRDPLTVFLVLIIV 123 Query 121 FSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVE 180 FSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVE Sbjct 124 FSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVE 183 Query 181 TAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNA 234 TAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNA Sbjct 184 TAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNA 237 >gi|118619642|ref|YP_907974.1| hypothetical protein MUL_4547 [Mycobacterium ulcerans Agy99] gi|118571752|gb|ABL06503.1| conserved membrane protein [Mycobacterium ulcerans Agy99] Length=296 Score = 432 bits (1112), Expect = 3e-119, Method: Compositional matrix adjust. Identities = 209/289 (73%), Positives = 252/289 (88%), Gaps = 1/289 (0%) Query 61 QTEHLAASHAHTRR-SGRQAAHQAWDPTGLLAAQEEEPAAVKTKRRARRDPLTVFLVLII 119 QTE +AAS+A +RR + T +A EEEP A KRR+RRDPL++FL+L+I Sbjct 8 QTEPIAASNADSRRPESTSPPASSASKTTSVATPEEEPLAGTRKRRSRRDPLSIFLILVI 67 Query 120 VFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISV 179 VFSLVLAG+I ELYARHVAN KVA AVAC VKD+ATASFGVAPLLLWQ+ATRHFTNI+V Sbjct 68 VFSLVLAGVIASELYARHVANGKVAAAVACEVKDKATASFGVAPLLLWQLATRHFTNITV 127 Query 180 ETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILG 239 ETAGNQ+RDAKGM+++++IQ+V LK+TPNS GT+GALDATI+W+S+GIKESVQ AIPILG Sbjct 128 ETAGNQVRDAKGMKLRISIQDVHLKSTPNSAGTLGALDATISWTSDGIKESVQKAIPILG 187 Query 240 AFVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLN 299 FVT+SVVTHPADGT+ELKG+LN+I A+P+V+GKGLELQI++FNTLGFSLPKE VQSTLN Sbjct 188 EFVTNSVVTHPADGTIELKGMLNDIIARPVVSGKGLELQIVSFNTLGFSLPKEAVQSTLN 247 Query 300 EFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI 348 +FT+ LT+NYPLGIHADSVQVT+TGVVS FSTR+A IPTG QNPCF+++ Sbjct 248 DFTADLTRNYPLGIHADSVQVTTTGVVSHFSTRNATIPTGSQNPCFANL 296 >gi|41410070|ref|NP_962906.1| hypothetical protein MAP3972c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398903|gb|AAS06522.1| hypothetical protein MAP_3972c [Mycobacterium avium subsp. paratuberculosis K-10] Length=352 Score = 408 bits (1048), Expect = 9e-112, Method: Compositional matrix adjust. Identities = 210/355 (60%), Positives = 264/355 (75%), Gaps = 10/355 (2%) Query 1 VTNPQGPPN-DPSPWARPGDQGPLARPPASSEASTGRLR---PGEPAGHIQEPVSPPTQP 56 +TNPQGPPN DPS W RP +QGP +PP +E T R+ PG+ G + P P Sbjct 1 MTNPQGPPNQDPSTWGRPANQGPYGQPP--TERPTERINTGGPGQAPGQVPPPPPAPAP- 57 Query 57 EQQPQTEHLAASHAHTRRSGRQAAHQAWDPTG--LLAAQEEEPAAVKTKRRARRDPLTVF 114 QTE A ++ G L A + K KRR RDP++V Sbjct 58 PPPGQTERFGAPRPQMQQPGYPPPPTPPAGPTERLATAPNPDNGPAKKKRRFLRDPVSVL 117 Query 115 LVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHF 174 L+ IIVF+L++AG IG ELY RHVA++KVAQAVAC VKDQATASFGV PL+LWQ AT+H+ Sbjct 118 LIFIIVFALLIAGFIGAELYVRHVADTKVAQAVACEVKDQATASFGVTPLMLWQQATKHY 177 Query 175 TNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNA 234 TNISV+TAGN IRDAKGM++ + I +VRLK+ NS+GTIGALDATI W+++GIK+SVQNA Sbjct 178 TNISVQTAGNNIRDAKGMKLSININDVRLKDNGNSKGTIGALDATIDWTTDGIKQSVQNA 237 Query 235 IPILGAFVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETV 294 IP+LG FVT++V THPADGT+ELKG+L+NITAKP+++G GL+LQI++FN LGF++PKE+V Sbjct 238 IPVLGPFVTNTVTTHPADGTIELKGMLDNITAKPVISGTGLQLQIVSFNALGFTMPKESV 297 Query 295 QSTLNEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQN-PCFSHI 348 QSTL++FTS+LTKNYPLGIHADSVQVT GV S FSTR+AAIPTG N PCF+++ Sbjct 298 QSTLDDFTSNLTKNYPLGIHADSVQVTDKGVTSHFSTRNAAIPTGNNNDPCFANL 352 >gi|118466216|ref|YP_883799.1| hypothetical protein MAV_4671 [Mycobacterium avium 104] gi|118167503|gb|ABK68400.1| conserved hypothetical protein [Mycobacterium avium 104] Length=352 Score = 404 bits (1039), Expect = 9e-111, Method: Compositional matrix adjust. Identities = 208/355 (59%), Positives = 262/355 (74%), Gaps = 10/355 (2%) Query 1 VTNPQGPPN-DPSPWARPGDQGPLARPPASSEASTGRLR---PGEPAGHIQEPVSPPTQP 56 +TNPQGPP DPS W RP +QGP +PP +E T R+ PG+ G + P P Sbjct 1 MTNPQGPPKQDPSTWGRPANQGPYGQPP--TERPTERINTGGPGQAPGQVPPPPPAPAP- 57 Query 57 EQQPQTEHLAASHAHTRRSGRQAAHQAWDPTG--LLAAQEEEPAAVKTKRRARRDPLTVF 114 QTE ++ G L A + K KRR RDP++V Sbjct 58 PPPGQTERFGTPRPQMQQPGYPPPPTPPAGPTERLATAPNPDNGPAKKKRRFLRDPVSVL 117 Query 115 LVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHF 174 L+ IIVF+L++AG IG ELY RHVA++KVAQAVAC VKDQATASFGV PL+LWQ AT+H+ Sbjct 118 LIFIIVFALIIAGFIGAELYVRHVADTKVAQAVACEVKDQATASFGVTPLMLWQQATKHY 177 Query 175 TNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNA 234 TNISV+TAGN IRDAKGM++ + I +VRLK+ NS+GTIGALDATI W+++GIK+SVQNA Sbjct 178 TNISVQTAGNNIRDAKGMKLSININDVRLKDNGNSKGTIGALDATIDWTTDGIKQSVQNA 237 Query 235 IPILGAFVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETV 294 IP+LG FVT++V THPADGT+ELKG+L+NITAKP+++G GL+LQI++FN LGF++PKE+V Sbjct 238 IPVLGPFVTNTVTTHPADGTIELKGMLDNITAKPVISGTGLQLQIVSFNALGFTMPKESV 297 Query 295 QSTLNEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQN-PCFSHI 348 QSTL++FTS+LTKNYPLGIHADSVQVT GV S FSTR+AAIPTG N PCF+++ Sbjct 298 QSTLDDFTSNLTKNYPLGIHADSVQVTDKGVTSHFSTRNAAIPTGNNNDPCFANL 352 >gi|296168081|ref|ZP_06850147.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896888|gb|EFG76516.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=281 Score = 387 bits (993), Expect = 2e-105, Method: Compositional matrix adjust. Identities = 181/255 (71%), Positives = 224/255 (88%), Gaps = 1/255 (0%) Query 95 EEPAAVKTKRRARRDPLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQ 154 EEPA K KRR RDPL++ LV IIV LV+AGL+G ELY RHVANSKVA+AVAC VKD+ Sbjct 27 EEPAPEKKKRRFLRDPLSILLVCIIVVCLVIAGLVGAELYVRHVANSKVAEAVACEVKDK 86 Query 155 ATASFGVAPLLLWQVATRHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIG 214 ATASFGVAPL+LWQ T+H+TNISV+TAGNQIRDAKGM++ L I++V+LK+T NS+GTIG Sbjct 87 ATASFGVAPLMLWQQLTKHYTNISVQTAGNQIRDAKGMKLNLNIRDVQLKSTANSKGTIG 146 Query 215 ALDATITWSSEGIKESVQNAIPILGAFVTSSVVTHPADGTVELKGLLNNITAKPIVAGKG 274 +LDATITW+S+GIKESVQNAIP+LG FVT++V THPADGT+ELKG+L+ +T KP+V+G G Sbjct 147 SLDATITWTSDGIKESVQNAIPVLGPFVTNTVTTHPADGTIELKGMLDALTTKPVVSGTG 206 Query 275 LELQIINFNTLGFSLPKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDA 334 L+LQI++FN LGF++PKE+VQSTL++FTS TKNYPLGIHADSVQVT +GV S FSTR+A Sbjct 207 LQLQIVSFNALGFTMPKESVQSTLDDFTSQFTKNYPLGIHADSVQVTDSGVTSHFSTRNA 266 Query 335 AIPTGIQN-PCFSHI 348 +IPTG N PCF+++ Sbjct 267 SIPTGKNNDPCFANL 281 >gi|254819807|ref|ZP_05224808.1| hypothetical protein MintA_07779 [Mycobacterium intracellulare ATCC 13950] Length=280 Score = 384 bits (986), Expect = 1e-104, Method: Compositional matrix adjust. Identities = 177/249 (72%), Positives = 221/249 (89%), Gaps = 1/249 (0%) Query 101 KTKRRARRDPLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFG 160 K KRR RDP++V L+ IIVF+L++AGLIG ELY RHVA++KVA+AVAC VKDQATASFG Sbjct 32 KKKRRFGRDPVSVLLIFIIVFALIIAGLIGAELYVRHVADTKVAEAVACEVKDQATASFG 91 Query 161 VAPLLLWQVATRHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATI 220 V PL+LWQ AT+H+TNISV+TAGN IRDAKGM++ L I +VR+K+T NS+GTIG+LDATI Sbjct 92 VTPLMLWQQATKHYTNISVQTAGNNIRDAKGMKLSLNINDVRIKDTANSKGTIGSLDATI 151 Query 221 TWSSEGIKESVQNAIPILGAFVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQII 280 +W+S+GIKESVQNAIP+LG FVT++V THPADGT+ELKG+L+NITAKP+V G GL+LQI+ Sbjct 152 SWTSDGIKESVQNAIPVLGPFVTNTVTTHPADGTIELKGMLDNITAKPVVEGTGLKLQIV 211 Query 281 NFNTLGFSLPKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGI 340 +FN LGF++PKE+VQSTL++FTS+LTKNYPLGIHADSVQVT GV S FSTR+A+IP G Sbjct 212 SFNALGFTMPKESVQSTLDDFTSNLTKNYPLGIHADSVQVTDKGVTSHFSTRNASIPAGD 271 Query 341 -QNPCFSHI 348 NPCF+++ Sbjct 272 NNNPCFANL 280 >gi|254777108|ref|ZP_05218624.1| hypothetical protein MaviaA2_20914 [Mycobacterium avium subsp. avium ATCC 25291] Length=280 Score = 382 bits (982), Expect = 4e-104, Method: Compositional matrix adjust. Identities = 176/249 (71%), Positives = 220/249 (89%), Gaps = 1/249 (0%) Query 101 KTKRRARRDPLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFG 160 K KRR RDP++V L+ IIVF+L++AG IG ELY RHVA++KVAQAVAC VKDQATASFG Sbjct 32 KKKRRFLRDPVSVLLIFIIVFALIIAGFIGAELYVRHVADTKVAQAVACEVKDQATASFG 91 Query 161 VAPLLLWQVATRHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATI 220 V PL+LWQ AT+H+TNISV+TAGN IRDAKGM++ + I +VRLK+ NS+GTIGALDATI Sbjct 92 VTPLMLWQQATKHYTNISVQTAGNNIRDAKGMKLSININDVRLKDNGNSKGTIGALDATI 151 Query 221 TWSSEGIKESVQNAIPILGAFVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQII 280 W+++GIK+SVQNAIP+LG FVT++V THPADGT+ELKG+L+NITAKP+++G GL+LQI+ Sbjct 152 DWTTDGIKQSVQNAIPVLGPFVTNTVTTHPADGTIELKGMLDNITAKPVISGTGLQLQIV 211 Query 281 NFNTLGFSLPKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGI 340 +FN LGF++PKE+VQSTL++FTS+LTKNYPLGIHADSVQVT GV S FSTR+AAIPTG Sbjct 212 SFNALGFTMPKESVQSTLDDFTSNLTKNYPLGIHADSVQVTDKGVTSHFSTRNAAIPTGN 271 Query 341 QN-PCFSHI 348 N PCF+++ Sbjct 272 NNDPCFANL 280 >gi|342859019|ref|ZP_08715673.1| hypothetical protein MCOL_09083 [Mycobacterium colombiense CECT 3035] gi|342133260|gb|EGT86463.1| hypothetical protein MCOL_09083 [Mycobacterium colombiense CECT 3035] Length=283 Score = 382 bits (980), Expect = 6e-104, Method: Compositional matrix adjust. Identities = 175/259 (68%), Positives = 223/259 (87%), Gaps = 3/259 (1%) Query 93 QEEEPAAVKTKRRARRDPLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVK 152 +++ + K KRR RDP++V L+ IIVF+L++AGLIG ELY RHVA+SKVA+AVAC VK Sbjct 25 NDDDATSGKKKRRFGRDPVSVLLIFIIVFALIIAGLIGAELYVRHVADSKVAEAVACEVK 84 Query 153 DQATASFGVAPLLLWQVATRHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGT 212 DQATASFGV PL+LWQ AT+H+TNISV+TAGN IRDAKGM++ + I +VRLK+T NS+GT Sbjct 85 DQATASFGVTPLMLWQQATKHYTNISVQTAGNNIRDAKGMKLSININDVRLKDTDNSKGT 144 Query 213 IGALDATITWSSEGIKESVQNAIPILGAFVTSSVVTHPADGTVELKGLLNNITAKPIVAG 272 +G+LDATI W+S+GIK+SVQNAIP+LG FVT++V THPADGT+ELKG+L+NITAKP+V+G Sbjct 145 VGSLDATIDWTSDGIKQSVQNAIPVLGPFVTNTVTTHPADGTIELKGMLDNITAKPVVSG 204 Query 273 KGLELQIINFNTLGFSLPKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTR 332 GL+LQI++FN LGF++PKE+VQSTL++FTS+LTKNYPLGIHADSVQVT GV S FSTR Sbjct 205 TGLQLQIVSFNALGFTMPKESVQSTLDDFTSNLTKNYPLGIHADSVQVTDKGVTSHFSTR 264 Query 333 DAAIPTGIQN---PCFSHI 348 +A IP N PCF+++ Sbjct 265 NATIPKDSSNNNDPCFANL 283 >gi|336460413|gb|EGO39311.1| hypothetical protein MAPs_40770 [Mycobacterium avium subsp. paratuberculosis S397] Length=280 Score = 381 bits (979), Expect = 7e-104, Method: Compositional matrix adjust. Identities = 176/249 (71%), Positives = 220/249 (89%), Gaps = 1/249 (0%) Query 101 KTKRRARRDPLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFG 160 K KRR RDP++V L+ IIVF+L++AG IG ELY RHVA++KVAQAVAC VKDQATASFG Sbjct 32 KKKRRFLRDPVSVLLIFIIVFALLIAGFIGAELYVRHVADTKVAQAVACEVKDQATASFG 91 Query 161 VAPLLLWQVATRHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATI 220 V PL+LWQ AT+H+TNISV+TAGN IRDAKGM++ + I +VRLK+ NS+GTIGALDATI Sbjct 92 VTPLMLWQQATKHYTNISVQTAGNNIRDAKGMKLSININDVRLKDNGNSKGTIGALDATI 151 Query 221 TWSSEGIKESVQNAIPILGAFVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQII 280 W+++GIK+SVQNAIP+LG FVT++V THPADGT+ELKG+L+NITAKP+++G GL+LQI+ Sbjct 152 DWTTDGIKQSVQNAIPVLGPFVTNTVTTHPADGTIELKGMLDNITAKPVISGTGLQLQIV 211 Query 281 NFNTLGFSLPKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGI 340 +FN LGF++PKE+VQSTL++FTS+LTKNYPLGIHADSVQVT GV S FSTR+AAIPTG Sbjct 212 SFNALGFTMPKESVQSTLDDFTSNLTKNYPLGIHADSVQVTDKGVTSHFSTRNAAIPTGN 271 Query 341 QN-PCFSHI 348 N PCF+++ Sbjct 272 NNDPCFANL 280 >gi|240169862|ref|ZP_04748521.1| hypothetical protein MkanA1_11142 [Mycobacterium kansasii ATCC 12478] Length=287 Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 172/257 (67%), Positives = 219/257 (86%), Gaps = 1/257 (0%) Query 93 QEEEPAAVKTKRRARRDPLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVK 152 + E AA K KRR RRDPL++FL+LIIVFSLV+AGLIG ELY RH ANSK+A+AVAC VK Sbjct 31 DDAESAAPKRKRRWRRDPLSIFLILIIVFSLVVAGLIGAELYVRHEANSKIAEAVACEVK 90 Query 153 DQATASFGVAPLLLWQVATRHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGT 212 D+A+ASFGVAPL+LWQ+AT+HFTNI+ ETAGNQ+RDAKGM++++ I++V+L++TPNS+GT Sbjct 91 DKASASFGVAPLVLWQLATKHFTNITAETAGNQVRDAKGMKLQINIRDVQLRDTPNSQGT 150 Query 213 IGALDATITWSSEGIKESVQNAIPILGAFVTSSVVTHPADGTVELKGLLNNITAKPIVAG 272 +GALDAT+TW+SEGIKES QNAIP+LG FV+++V THP DGTVE+KG L+NI KP V G Sbjct 151 VGALDATVTWTSEGIKESFQNAIPVLGPFVSNTVTTHPRDGTVEMKGFLDNIVVKPRVTG 210 Query 273 KGLELQIINFNTLGFSLPKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTR 332 L+L I FN LGF+LPKE+VQS +++F S LTK++PLGIH DSVQVT TGVV+ STR Sbjct 211 NQLQLPIETFNALGFTLPKESVQSMIDDFFSKLTKDFPLGIHWDSVQVTDTGVVAHLSTR 270 Query 333 DAAIPT-GIQNPCFSHI 348 +A IP G Q+PCF+++ Sbjct 271 NATIPAGGEQDPCFANL 287 >gi|15828325|ref|NP_302588.1| hypothetical protein ML2450 [Mycobacterium leprae TN] gi|221230802|ref|YP_002504218.1| putative secreted protein [Mycobacterium leprae Br4923] gi|13094018|emb|CAC31967.1| possible secreted protein [Mycobacterium leprae] gi|219933909|emb|CAR72549.1| possible secreted protein [Mycobacterium leprae Br4923] Length=245 Score = 362 bits (930), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 170/243 (70%), Positives = 211/243 (87%), Gaps = 2/243 (0%) Query 108 RDPLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLW 167 RDPL + L+LIIV +LV++GLIG EL+ARH ANSKVA+ V C +KDQATA FGV PLLLW Sbjct 3 RDPLAIVLILIIVVALVISGLIGAELFARHTANSKVARVVTCEIKDQATAKFGVTPLLLW 62 Query 168 QVATRHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGI 227 Q AT+HFTNISVETAGNQIRDAKGM+I + IQNV++++TP SRGTIG LDA ITWSS+GI Sbjct 63 QFATQHFTNISVETAGNQIRDAKGMKIAIDIQNVQIRDTPTSRGTIGVLDAIITWSSDGI 122 Query 228 KESVQNAIPILGAFVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGF 287 ++SVQN+IP+LG VT+SV THP +GT+ELKG+LN+I AKP+V+ GL+LQI++FNTLGF Sbjct 123 RQSVQNSIPVLGGVVTTSVTTHPTNGTIELKGMLNDIVAKPVVSNGGLQLQIVSFNTLGF 182 Query 288 SLPKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIP--TGIQNPCF 345 SLPKETVQ TL++FT++LTKNYPLGIHAD+V+VTSTGV S FS R+ IP TG Q+PCF Sbjct 183 SLPKETVQFTLDDFTTNLTKNYPLGIHADNVEVTSTGVTSHFSARNTNIPNSTGGQDPCF 242 Query 346 SHI 348 +++ Sbjct 243 ANL 245 >gi|120401827|ref|YP_951656.1| hypothetical protein Mvan_0812 [Mycobacterium vanbaalenii PYR-1] gi|119954645|gb|ABM11650.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=290 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 128/224 (58%), Positives = 172/224 (77%), Gaps = 1/224 (0%) Query 125 LAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVETAGN 184 AGL+G ELYAR+ A++ VA V CVV+D ATASFGV P L Q + H+TNI +ETAGN Sbjct 68 FAGLLGAELYARNRADTVVAGTVECVVQDDATASFGVLPPFLMQHVSGHYTNIRIETAGN 127 Query 185 QIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGAFVTS 244 Q+RDAKGM++ L I +VRL+++P S GTIG+L A ITWS+EGIK+++Q AIP++G+FVT Sbjct 128 QVRDAKGMKVDLDINDVRLEDSPTSSGTIGSLVAHITWSAEGIKQTIQGAIPLVGSFVT- 186 Query 245 SVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNEFTSS 304 V T+P DGTVEL+G L +ITA+P VA G+ L++ LGF+LP+E VQ L+ FTS Sbjct 187 GVTTNPNDGTVELEGALGSITARPEVADGGIALRVQQVTGLGFTLPREAVQPALDAFTSE 246 Query 305 LTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI 348 LT++YP+ I ADSV+VT +GVVS+FSTR+A+IP +PCF+ + Sbjct 247 LTQDYPMDIRADSVEVTDSGVVSQFSTRNASIPKQTDDPCFAGL 290 >gi|333989108|ref|YP_004521722.1| hypothetical protein JDM601_0468 [Mycobacterium sp. JDM601] gi|333485076|gb|AEF34468.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=303 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 134/247 (55%), Positives = 173/247 (71%), Gaps = 5/247 (2%) Query 105 RARRDPLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPL 164 R RDPL + L+ + V +L LAGLIG EL AR +A++KVA+A CVV D+AT SFGV P Sbjct 59 RLLRDPLALVLIFVTVIALALAGLIGAELIARRIADNKVAKATECVVHDKATVSFGVTPP 118 Query 165 LLWQVATRHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSS 224 LWQ T ++TNIS+ TAGNQ++DAK M L I +V L T +S+GTIGALDAT+TW S Sbjct 119 FLWQHFTGNYTNISIHTAGNQVKDAKQMTADLNISDVDLHGTGDSKGTIGALDATLTWPS 178 Query 225 EGIKESVQNAIPILGAFVTSSVVTHPADGTVELKGL--LNNITAKPIVAGKGLELQIINF 282 GIKE+VQ+ +P+LG V S + T+ DGTVELKG L + KP V GL L++ Sbjct 179 AGIKETVQSMVPLLGNLV-SDLKTNAQDGTVELKGAFGLATVVVKPEVVNGGLSLKVQKL 237 Query 283 NTLG-FSLPKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQ 341 LG +LP+E++Q L+ F LTK YPLG+ ADS+QVT TGVV+RFS+RDAAIP Sbjct 238 TGLGALTLPRESIQPELDRFARELTKRYPLGVRADSIQVTDTGVVARFSSRDAAIPRS-D 296 Query 342 NPCFSHI 348 +PCF+H+ Sbjct 297 DPCFAHL 303 >gi|296164616|ref|ZP_06847183.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900035|gb|EFG79474.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=241 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 125/239 (53%), Positives = 171/239 (72%), Gaps = 5/239 (2%) Query 115 LVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHF 174 LVL V ++LA +G EL+ RH+A SKVA AVAC V+D AT SF P +LWQ + + Sbjct 3 LVLATVLVVILAAAVGAELFLRHLAGSKVASAVACEVQDSATVSFASTPPMLWQYFSGRY 62 Query 175 TNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNA 234 +ISV+TAGNQ+R AKGM++ + I+++ L + NS+GTIGAL+ TITWSS+GIK+S+Q+A Sbjct 63 PDISVQTAGNQVRSAKGMKVNINIKDLHLSDANNSKGTIGALNGTITWSSDGIKQSIQDA 122 Query 235 IPILGAFVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETV 294 IP+LG+FVTS V T+P DGT++LKGLL++ T KP +A GL LQ++N LG + + V Sbjct 123 IPVLGSFVTSQVTTNPGDGTIQLKGLLDSATVKPQIANNGLSLQVVNLTALGSKMSTDKV 182 Query 295 QSTLNEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNP-----CFSHI 348 Q+ L+ TS T+NYPLGIHAD+V+VT TGV + FST +A IP + CFS + Sbjct 183 QTNLDNLTSKATQNYPLGIHADNVKVTDTGVEATFSTTNATIPAASSSSQTGQDCFSGV 241 >gi|118469907|ref|YP_885326.1| hypothetical protein MSMEG_0923 [Mycobacterium smegmatis str. MC2 155] gi|118171194|gb|ABK72090.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=311 Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 125/225 (56%), Positives = 174/225 (78%), Gaps = 3/225 (1%) Query 126 AGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVETAGNQ 185 AG++GGELYAR+ A+S VA V+CVV+D ASF P L Q + H+TNI++ETAGNQ Sbjct 88 AGVLGGELYARNRADSIVAGIVSCVVEDDVKASFDPLPPFLLQHMSGHYTNINIETAGNQ 147 Query 186 IRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAI--PILGAFVT 243 IR+AKGM++ L I++VRL++TP S GT+G+L+A ITWS+EGI+++V + + P +G+ + Sbjct 148 IREAKGMKVALDIRDVRLEDTPTSTGTVGSLNADITWSTEGIRQTVADMVQLPFIGSAI- 206 Query 244 SSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNEFTS 303 S V T+P+ GT+ELKGL+ ITA+P V KGL LQI + +G S P+ET+Q L+ FTS Sbjct 207 SDVKTNPSAGTIELKGLIGTITARPRVVNKGLSLQITELSAIGLSWPRETLQPILDSFTS 266 Query 304 SLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI 348 LT+NYP+GIHADSVQVT +GVV+RFST++AA+P G ++PCF+ I Sbjct 267 QLTENYPMGIHADSVQVTDSGVVARFSTQNAAMPKGEEDPCFAGI 311 >gi|145220702|ref|YP_001131380.1| hypothetical protein Mflv_0096 [Mycobacterium gilvum PYR-GCK] gi|315442346|ref|YP_004075225.1| hypothetical protein Mspyr1_06870 [Mycobacterium sp. Spyr1] gi|145213188|gb|ABP42592.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315260649|gb|ADT97390.1| hypothetical protein Mspyr1_06870 [Mycobacterium sp. Spyr1] Length=285 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 133/258 (52%), Positives = 188/258 (73%), Gaps = 2/258 (0%) Query 91 AAQEEEPAAVKTKRRARRDPLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACV 150 A Q++ K KR DP++V LV++IV +LV AGL+G ELYAR+ A++ VA + CV Sbjct 30 APQDDSSLPAKLKR-IFSDPVSVVLVVVIVLALVFAGLLGTELYARNRADTVVAGTIECV 88 Query 151 VKDQATASFGVAPLLLWQVATRHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSR 210 V+D ATASFGV P L Q + H+ NI +ETAGNQ+RDAKGM++ + I +VRL+++ S Sbjct 89 VQDDATASFGVMPPFLLQHLSGHYDNIRIETAGNQVRDAKGMKLNIDINDVRLEDSATSS 148 Query 211 GTIGALDATITWSSEGIKESVQNAIPILGAFVTSSVVTHPADGTVELKGLLNNITAKPIV 270 G+IG+L A I+WS+EGI+E++Q AIP++G+FV ++V T GT+EL+G L +ITAKP+V Sbjct 149 GSIGSLVANISWSTEGIRETIQGAIPLVGSFV-NAVTTDAGAGTIELEGALGSITAKPVV 207 Query 271 AGKGLELQIINFNTLGFSLPKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGVVSRFS 330 GL LQ+ LGF+LP+E VQ L+ FT LT++YP+ I ADSV+VT +GVVS+FS Sbjct 208 VNGGLSLQVQQVTGLGFTLPREAVQPALDAFTERLTQDYPMDIRADSVEVTDSGVVSQFS 267 Query 331 TRDAAIPTGIQNPCFSHI 348 T +A+IP Q+PCF+ + Sbjct 268 TSNASIPKSQQDPCFAGL 285 >gi|108797627|ref|YP_637824.1| hypothetical protein Mmcs_0647 [Mycobacterium sp. MCS] gi|119866714|ref|YP_936666.1| hypothetical protein Mkms_0660 [Mycobacterium sp. KMS] gi|126433251|ref|YP_001068942.1| hypothetical protein Mjls_0640 [Mycobacterium sp. JLS] gi|108768046|gb|ABG06768.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119692803|gb|ABL89876.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126233051|gb|ABN96451.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=290 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 132/240 (55%), Positives = 183/240 (77%), Gaps = 1/240 (0%) Query 109 DPLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQ 168 DPL++ L ++IV +L AGL+GGELYAR+ A+ V++ V+CVV+D+ATASFG P L Q Sbjct 52 DPLSIVLAVVIVVALTAAGLLGGELYARNRADDVVSRVVSCVVEDEATASFGAMPPFLLQ 111 Query 169 VATRHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIK 228 T H+TNI +ETAGNQIRDAKGM++ + IQ+VRL++T NS GTIG+L A ITWSSEGI Sbjct 112 HMTGHYTNIDIETAGNQIRDAKGMKVGIDIQDVRLEDTANSSGTIGSLAANITWSSEGIT 171 Query 229 ESVQNAIPILGAFVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFS 288 ++VQ+AIP+ G+F+ + V T+P+ GT+EL+G L +I AKP V+ G+ LQ+ + LGF+ Sbjct 172 QTVQDAIPLFGSFL-NGVSTNPSAGTIELEGALGSIVAKPQVSNGGITLQVQQLSGLGFT 230 Query 289 LPKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI 348 LP+E VQ L+ FTS LT+NYP+ I A SV+VT TGV + FST++A IP ++PCF+ + Sbjct 231 LPREAVQPALDAFTSGLTQNYPMDIKAQSVEVTDTGVTALFSTQNAEIPKSGEDPCFNGL 290 >gi|8439570|gb|AAF74996.1|AF143402_1 putative multicopper oxidase [Mycobacterium avium] Length=149 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 107/149 (72%), Positives = 134/149 (90%), Gaps = 0/149 (0%) Query 122 SLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVET 181 +L++AG IG ELY RHVA++KVAQAVAC VKDQATASFGV PL+LWQ AT+H+TNISV+T Sbjct 1 ALIIAGFIGAELYVRHVADTKVAQAVACEVKDQATASFGVTPLMLWQQATKHYTNISVQT 60 Query 182 AGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGAF 241 AGN IRDAKGM++ + I +VRLK+ NS+GTIGALDATI W+++GIK+SVQNAIP+LG F Sbjct 61 AGNNIRDAKGMKLSININDVRLKDNGNSKGTIGALDATIDWTTDGIKQSVQNAIPVLGPF 120 Query 242 VTSSVVTHPADGTVELKGLLNNITAKPIV 270 VT++V THPADGT+ELKG+L+NITAKP++ Sbjct 121 VTNTVTTHPADGTIELKGMLDNITAKPVI 149 >gi|333989107|ref|YP_004521721.1| hypothetical protein JDM601_0467 [Mycobacterium sp. JDM601] gi|333485075|gb|AEF34467.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=255 Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 110/220 (50%), Positives = 148/220 (68%), Gaps = 0/220 (0%) Query 129 IGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVETAGNQIRD 188 GG+ YA H A S VA AV C D AT SF P +L Q + +ISV+TAGNQIR Sbjct 36 FGGQAYATHRAKSLVADAVQCEADDSATVSFASDPPVLAQYLRGDYPHISVQTAGNQIRK 95 Query 189 AKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGAFVTSSVVT 248 AKGMQ+ L I++V ++ + +S+GTIG+LD TITW ++GIK+S+Q+ +P++G+ VT V T Sbjct 96 AKGMQLDLDIRDVHVQKSADSKGTIGSLDGTITWPADGIKQSIQDVVPVIGSIVTGKVST 155 Query 249 HPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNEFTSSLTKN 308 PA GTVELKGLLN T KP + GL L++++ LG L ETVQ L++ T +T + Sbjct 156 DPAAGTVELKGLLNRATVKPQIVDNGLHLEVVDLEALGKDLDSETVQRNLDDLTGKVTGD 215 Query 309 YPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI 348 PLGIH DS QVT +GVV +FSTR+A IP + CF+ + Sbjct 216 LPLGIHIDSSQVTDSGVVVKFSTRNATIPASSSSQCFARL 255 >gi|118473918|ref|YP_886468.1| hypothetical protein MSMEG_2110 [Mycobacterium smegmatis str. MC2 155] gi|118175205|gb|ABK76101.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=326 Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 112/223 (51%), Positives = 156/223 (70%), Gaps = 5/223 (2%) Query 127 GLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVETAGNQI 186 GL G ELYARH A + + CVV+D AT SFGV P LWQ T H+TNISV+TAG Q+ Sbjct 108 GLAGAELYARHRAGTLLVAVAECVVEDNATVSFGVNPPFLWQHITGHYTNISVQTAGRQV 167 Query 187 RDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGAFVTSSV 246 + A+GM +T++++RL+ T +S+GTIG+L AT++W+SEGIK++V +P +G+ VT V Sbjct 168 QAAEGMTADVTLKDIRLQGTADSKGTIGSLTATLSWTSEGIKDTVAANLPGVGSLVT-GV 226 Query 247 VTHPADGTVELKGLLNN-ITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNEFTSSL 305 T A GT+ L+ +N +TA+P+V L L++++ T FS KETVQ LN T+ L Sbjct 227 STDAAAGTLTLEAAGDNRVTARPVVTDGDLTLEVLDV-TGPFS--KETVQDALNGLTTKL 283 Query 306 TKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI 348 +NYPLGIHADSV VT TG+V RFS++DA+IP +PCF+ + Sbjct 284 NENYPLGIHADSVAVTDTGLVGRFSSQDASIPNDEADPCFARL 326 >gi|120402920|ref|YP_952749.1| hypothetical protein Mvan_1923 [Mycobacterium vanbaalenii PYR-1] gi|119955738|gb|ABM12743.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=328 Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 108/237 (46%), Positives = 157/237 (67%), Gaps = 4/237 (1%) Query 112 TVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVAT 171 TV L+ IIV ++++ G+ G ELYARH A+ + CVV+D AT S+GV P LWQ T Sbjct 96 TVPLLAIIVVAVLVGGVAGAELYARHRADDVLVGIAECVVQDGATISYGVNPPFLWQHLT 155 Query 172 RHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESV 231 +TNI+V TAG++++ A GM +T+++VRL+++ S+G IG+L AT+TW S+GIK++V Sbjct 156 GRYTNITVHTAGDRVQSADGMTADVTLEDVRLQDSATSKGAIGSLRATLTWRSDGIKDTV 215 Query 232 QNAIPILGAFVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPK 291 +P +GA +T V T PA GT+ L ++TAKP+V L L++++ + PK Sbjct 216 AANLPGVGALIT-GVRTDPAAGTLVLDAGSASVTAKPVVVEGDLNLEVLD---VAGPFPK 271 Query 292 ETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI 348 E VQS L++ T L NYPLGIHAD V+VT GVV FS++DA+IP N CF+ + Sbjct 272 EAVQSALDDLTKKLNDNYPLGIHADGVEVTDAGVVGTFSSQDASIPREDTNACFARL 328 >gi|315445385|ref|YP_004078264.1| hypothetical protein Mspyr1_38350 [Mycobacterium sp. Spyr1] gi|315263688|gb|ADU00430.1| hypothetical protein Mspyr1_38350 [Mycobacterium sp. Spyr1] Length=294 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 97/215 (46%), Positives = 141/215 (66%), Gaps = 4/215 (1%) Query 134 YARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVETAGNQIRDAKGMQ 193 YARH A++ + CVV+D T S+GV P LWQ T +TNISV TAG++++ A GM Sbjct 84 YARHRADAVLVGIAECVVEDGTTISYGVNPPFLWQHITGRYTNISVRTAGDRVQSADGMT 143 Query 194 IKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGAFVTSSVVTHPADG 253 +T+++VRL + +S+G IGALDAT+TW++ GIK++V +P +GA VT V T P+ G Sbjct 144 ADVTLEDVRLSGSGDSKGAIGALDATLTWTAAGIKDTVAANLPGVGALVT-DVTTDPSAG 202 Query 254 TVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNEFTSSLTKNYPLGI 313 T+E+ ++ AKP+V L +++++ PK+ VQS L++ T L NYPLGI Sbjct 203 TLEMAAGSASVIAKPVVVKGNLNVEVLDVTG---PFPKDAVQSALDDLTRKLNDNYPLGI 259 Query 314 HADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI 348 ADSV+VT VV FS+RDA+IP G +PCF+ + Sbjct 260 RADSVEVTDAAVVGSFSSRDASIPDGESDPCFARL 294 >gi|145225014|ref|YP_001135692.1| hypothetical protein Mflv_4435 [Mycobacterium gilvum PYR-GCK] gi|145217500|gb|ABP46904.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=303 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 98/215 (46%), Positives = 141/215 (66%), Gaps = 4/215 (1%) Query 134 YARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVETAGNQIRDAKGMQ 193 YARH A++ + CVV+D T S+GV P LWQ T +TNISV TAG++++ A GM Sbjct 93 YARHRADAVLVGIAECVVEDGTTISYGVNPPFLWQHITGRYTNISVRTAGDRVQSADGMT 152 Query 194 IKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGAFVTSSVVTHPADG 253 +T+++VRL + +S+GTIGAL AT+TW++ GIK++V +P +GA VT V T P+ G Sbjct 153 ADVTLEDVRLSGSGDSKGTIGALHATLTWTAAGIKDTVAANLPGVGALVT-DVTTDPSAG 211 Query 254 TVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNEFTSSLTKNYPLGI 313 T+E+ ++ AKP+V L L++++ PK+ VQS L++ T L NYPLGI Sbjct 212 TLEMAAGSASVIAKPVVVEGNLNLEVLDVTG---PFPKDAVQSALDDLTRKLNDNYPLGI 268 Query 314 HADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI 348 ADSV+VT VV FS+RDA+IP G +PCF+ + Sbjct 269 RADSVEVTDAAVVGSFSSRDASIPDGESDPCFARL 303 >gi|169631155|ref|YP_001704804.1| hypothetical protein MAB_4077 [Mycobacterium abscessus ATCC 19977] gi|169243122|emb|CAM64150.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=313 Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 86/224 (39%), Positives = 130/224 (59%), Gaps = 10/224 (4%) Query 130 GGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVETAGNQIRDA 189 G ELYAR +S+V A +C+V+D ATASFG PL+L Q H ++++TAGNQI A Sbjct 93 GIELYARQRTSSEVNAATSCLVQDGATASFGPMPLVL-QYLGDHIDKLTIKTAGNQIAQA 151 Query 190 KGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIP-ILGAFVTSSVVT 248 K M + +T+++V LK T +S GTIG LD ++W + GI ES + +P +LG+ V T Sbjct 152 KKMTVAITVRDVSLKKTADSLGTIGRLDVEVSWPTAGITESARALVPGMLGSMV-GDATT 210 Query 249 HPADGTVELK--GLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNEFTSSLT 306 + + G V L G L IT KP++ + LQ N + LP+E +Q L+ F+ L Sbjct 211 NESTGEVTLSAAGGLAQITTKPVIKDGMVTLQSENVSAF-IGLPREIIQPALDTFSKGLV 269 Query 307 -KNYPLGIHADSVQVTSTGVVSRFSTRDAAI-PTGIQNPCFSHI 348 YP+G+ A V+VT+ G+ + S+ + + PT PC ++ Sbjct 270 GGQYPMGLKAQEVKVTNDGITVKLSSTNQPMKPT--NEPCLQNL 311 >gi|111019086|ref|YP_702058.1| hypothetical protein RHA1_ro02093 [Rhodococcus jostii RHA1] gi|110818616|gb|ABG93900.1| possible secreted protein [Rhodococcus jostii RHA1] Length=255 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 65/216 (31%), Positives = 115/216 (54%), Gaps = 8/216 (3%) Query 113 VFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATR 172 V ++ ++V + ++A L+GGELY R+ + +A + Q P+LL Q + Sbjct 14 VLVISLVVIAALVAVLVGGELYVRNRVKTCMADQFESQLGSQVDVGLSWKPVLL-QSVDK 72 Query 173 HFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQ 232 + I++++ + A+GMQ+ + ++R++NT +S GTIG+ DA ITWS+ GI ++Q Sbjct 73 NVPYITIDSDDTKFGPAQGMQVHAQVNDIRIENTADSSGTIGSSDADITWSTAGILATLQ 132 Query 233 NAIPILGAFVTSSVVTHPADGTVELK---GLLNNITAKPIVAGKGLELQIINFNTLGFSL 289 G+ + S V + GT+ L ++T KP V ++++ + LGF L Sbjct 133 Q--QAFGSLI-SGVTADSSAGTLRFSVGPAGLADLTVKPGVVNGTVKVETVGAEILGFGL 189 Query 290 PKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGV 325 P + V + TSSL + YPLG+ S++VT + Sbjct 190 PTDLVDGVVQTLTSSL-QTYPLGMQPTSLKVTDDAI 224 >gi|226361178|ref|YP_002778956.1| hypothetical protein ROP_17640 [Rhodococcus opacus B4] gi|226239663|dbj|BAH50011.1| hypothetical protein [Rhodococcus opacus B4] Length=242 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/216 (30%), Positives = 115/216 (54%), Gaps = 8/216 (3%) Query 113 VFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATR 172 + ++ ++V + ++A L+GGEL+ RH + +A + Q P+LL Q + Sbjct 1 MLVISLVVIAALVAVLVGGELFVRHRVKTCMADQFESQLGSQVDVGLSWKPVLL-QSVDK 59 Query 173 HFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQ 232 + I++++ + A+GMQ+ + ++R++NT +S GTIG+ DA +TWS+ GI ++Q Sbjct 60 NVPYITIDSDDTKFGPAQGMQVHAQVNDIRIENTADSSGTIGSSDADVTWSTAGILATLQ 119 Query 233 NAIPILGAFVTSSVVTHPADGTVELK---GLLNNITAKPIVAGKGLELQIINFNTLGFSL 289 G+ + S V + GT++ L ++T KP V +++ + LGF L Sbjct 120 Q--QAFGSLI-SGVTADSSAGTLKFSVGPAGLADLTVKPEVVNGTVKVDTVGAAILGFGL 176 Query 290 PKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGV 325 P + V + TSSL + YPLG+ S++VT + Sbjct 177 PTDLVDGVVQILTSSL-QTYPLGMQPTSLKVTDDAI 211 >gi|54027176|ref|YP_121418.1| hypothetical protein nfa52020 [Nocardia farcinica IFM 10152] gi|54018684|dbj|BAD60054.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=240 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 60/229 (27%), Positives = 123/229 (54%), Gaps = 15/229 (6%) Query 97 PAAVKTKRRARRDPLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQAT 156 PAA + RR T+ + L +V +L++ L+ GE YARH + ++ + + Sbjct 6 PAAPRVSRR------TLVIALAVVATLLVTALVAGEAYARHAVSKCISSQFEQEMGSKID 59 Query 157 ASFGVAPLLLWQVATRHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGAL 216 FG PLL+ + + ++++V++ ++ A GM + T ++V + + GT+G+ Sbjct 60 VGFGAKPLLITWLHGK-VSSVTVDSKDDKFGPAVGMNVHATFRDVEVADNGKG-GTVGSS 117 Query 217 DATITWSSEGIKESVQNAIPILGAFVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLE 276 +A +TWS++GI++++ + + + S V+ T+++ G L + +P V ++ Sbjct 118 EADVTWSNDGIEQTLAGMVSGVRSSAASDVI------TLDVLGGLAQLQVRPQVRDGAVD 171 Query 277 LQIINFNTLGFSLPKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGV 325 +Q ++ LG LP + V ++ FT SL ++YP+G+ A ++VT G+ Sbjct 172 VQTMSAEVLGIGLPTDLVAGIVDVFTESL-QSYPMGLRATEIEVTDNGI 219 >gi|226305083|ref|YP_002765041.1| hypothetical protein RER_15940 [Rhodococcus erythropolis PR4] gi|226184198|dbj|BAH32302.1| hypothetical protein RER_15940 [Rhodococcus erythropolis PR4] Length=272 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 61/217 (29%), Positives = 105/217 (49%), Gaps = 10/217 (4%) Query 113 VFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATR 172 V ++L++V ++++A L+GGELY R+ + +A + Q P+LL Q + Sbjct 30 VLVILLVVIAVLVAALVGGELYVRNQVKTCMADQFQSELGSQVDVGLSWKPVLL-QAVDK 88 Query 173 HFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQ 232 IS+++ + A GMQ+ + ++ L+ + + GTIG+ A +TWS+ GI ++Q Sbjct 89 KVPYISIDSDDSSFGPATGMQVHAKVNDINLQPSAGNSGTIGSSSADVTWSTAGILATLQ 148 Query 233 NAIPILGAFVTSSVVTHPADGTVELK----GLLNNITAKPIVAGKGLELQIINFNTLGFS 288 G V S V + GT+ G L +T KP V +++Q + LG Sbjct 149 E--QTFGGLV-SGVTADSSAGTLAFDVGPVG-LAKLTVKPTVTNGVVDVQTVGAEILGLG 204 Query 289 LPKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGV 325 LP + V + T SL + YPL + + VT + Sbjct 205 LPTDLVDGIVQTLTDSL-QTYPLDMKPTKLTVTDDAI 240 >gi|312141140|ref|YP_004008476.1| hypothetical protein REQ_38090 [Rhodococcus equi 103S] gi|325674038|ref|ZP_08153728.1| hypothetical protein HMPREF0724_11510 [Rhodococcus equi ATCC 33707] gi|311890479|emb|CBH49797.1| putative secreted protein [Rhodococcus equi 103S] gi|325555303|gb|EGD24975.1| hypothetical protein HMPREF0724_11510 [Rhodococcus equi ATCC 33707] Length=245 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 55/197 (28%), Positives = 105/197 (54%), Gaps = 6/197 (3%) Query 130 GGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVETAGNQIRDA 189 GGEL+ R A S + + S P+LL Q+ ++ + +++ G+ A Sbjct 29 GGELFLRQRATSCMESQFESQLGSPVDVSLSWKPVLL-QMTGKNVPYVEIDSKGSAFGPA 87 Query 190 KGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGAFVTSSVVTH 249 +GM+++ ++++ ++ +S GTIG+ A +TWS++GI ++Q A P LG +T +V Sbjct 88 QGMEVRARANDIKITDSADSSGTIGSSSADVTWSTDGILATLQ-AQP-LGGMIT-AVTAD 144 Query 250 PADGTVELK-GLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNEFTSSLTKN 308 P GT+++ G ++T +P V ++++ ++ LG LP V + T L + Sbjct 145 PTAGTLKVSVGGFADMTVQPKVQDGKIDVETVSAAILGLGLPTALVDGIVQALTDGL-QQ 203 Query 309 YPLGIHADSVQVTSTGV 325 YPLG+ ++ VT +G+ Sbjct 204 YPLGMEPTALTVTDSGI 220 >gi|229490187|ref|ZP_04384034.1| putative secreted protein [Rhodococcus erythropolis SK121] gi|229322935|gb|EEN88709.1| putative secreted protein [Rhodococcus erythropolis SK121] Length=256 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 59/217 (28%), Positives = 104/217 (48%), Gaps = 10/217 (4%) Query 113 VFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATR 172 V ++L++V ++++A L+GGELY R+ + +A + Q P+LL Q + Sbjct 14 VLIILLVVIAVLVAALVGGELYVRNQVKTCMADQFQSELGSQVDVGLSWKPVLL-QAVDK 72 Query 173 HFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQ 232 IS+++ + A GMQ+ + ++ L+ + + GT+G+ A +TWS+ GI ++Q Sbjct 73 KVPYISIDSDDSSFGPATGMQVHAKVNDINLQPSAGNSGTVGSSSADVTWSTAGILATLQ 132 Query 233 NAIPILGAFVTSSVVTHPADGTVELK----GLLNNITAKPIVAGKGLELQIINFNTLGFS 288 G V S V + GT+ G L +T KP V +++Q + LG Sbjct 133 EQ--TFGGLV-SGVTADSSAGTLAFDVGPVG-LAKLTVKPTVTNGVVDVQTVGAEILGLG 188 Query 289 LPKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGV 325 LP + V + SL + YPL + + VT + Sbjct 189 LPTDLVDGIVQTLIDSL-QTYPLDMKPTKLTVTDDAI 224 >gi|333918290|ref|YP_004491871.1| hypothetical protein AS9A_0617 [Amycolicicoccus subflavus DQS3-9A1] gi|333480511|gb|AEF39071.1| hypothetical protein AS9A_0617 [Amycolicicoccus subflavus DQS3-9A1] Length=255 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 59/203 (30%), Positives = 102/203 (51%), Gaps = 7/203 (3%) Query 129 IGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVETAGNQIRD 188 +G ELY R+ + +AQ+++ + + P+L+ Q+ + V T GN++ D Sbjct 38 VGSELYLRNRVSDCMAQSMSESIGSDVEVTMSRKPMLM-QMVDGKTPWVEVSTTGNRLGD 96 Query 189 AKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGAFVTSSVVT 248 A GM + L + V+ N + T+ + A I WSS+GI ++Q IL V +SV Sbjct 97 ADGMHMDLRLNGVQTFNDGDIATTVESSAADIRWSSQGILATLQQQ-GILA--VVTSVEP 153 Query 249 HPADGT--VELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNEFTSSLT 306 PAD T +++ G + +T P + + + L++ N LG +P+E QS + L Sbjct 154 RPADQTLAIQIVGAILGVTVAPTIQNEAISLEVTEANLLGIGIPRELPQSIIQTIGDGL- 212 Query 307 KNYPLGIHADSVQVTSTGVVSRF 329 ++PLG+ + VTS G+ R Sbjct 213 ADFPLGMKPTDMTVTSEGIEVRL 235 >gi|343925762|ref|ZP_08765277.1| hypothetical protein GOALK_050_00570 [Gordonia alkanivorans NBRC 16433] gi|343764113|dbj|GAA12203.1| hypothetical protein GOALK_050_00570 [Gordonia alkanivorans NBRC 16433] Length=393 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 50/252 (20%), Positives = 101/252 (41%), Gaps = 26/252 (10%) Query 104 RRARRDPLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAP 163 R++R V L I V LV+ G +G ELY R+ + + ++ + + + S P Sbjct 134 RKSRSTKKIVALSAIAVLLLVVIGAVGSELYLRNKVTNCLEESFSGLTGVPTSVSLSRKP 193 Query 164 LLLWQVATRHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNS----RGT------- 212 ++L + + + D +G+++ + + N RG Sbjct 194 IILQGSGDVPYVQVDTKDG----SDPQGVRLHMRADGISGDNNSTDIRSLRGDGFIPYER 249 Query 213 IGALDATITWSSEGIKESVQNAIPILGAFVTSSVVTHPADGTVELKGLLN--------NI 264 I L + G + + A P+ + + ADGT E++ + Sbjct 250 IVELSKESAPAGAGGQSTGNGASPV---GSVEEITGNAADGTFEVQAGFPVMFFSVPVSA 306 Query 265 TAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTG 324 T KP++ G +E +++ + L F +P + Q +++ T+S + + D ++VT TG Sbjct 307 TIKPVLTGGRVEFEVVKASALVFGIPPDFAQQIVDQITTSALGPFFDEVQVDQLKVTDTG 366 Query 325 VVSRFSTRDAAI 336 + S D + Sbjct 367 LEFAISGSDVQL 378 >gi|319948847|ref|ZP_08022962.1| hypothetical protein ES5_05650 [Dietzia cinnamea P4] gi|319437491|gb|EFV92496.1| hypothetical protein ES5_05650 [Dietzia cinnamea P4] Length=246 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 57/218 (27%), Positives = 92/218 (43%), Gaps = 17/218 (7%) Query 130 GGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVETAGNQIRDA 189 G EL R+ + + + G P+LL V T ++ + T G A Sbjct 31 GLELGMRNAIKDNLRDEITTTLGSTPEVDLGPQPVLLSYV-TGALGSVRISTDGVPAEGA 89 Query 190 KG--MQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQN------AIPILGAF 241 G I +T + VR + SR I +L T S E + E+ ++ +LG Sbjct 90 TGPVPAIDITAEGVRSEG-ETSR--IDSLTGTAFVSDETMAEAARSQGAGGMGDSLLGGL 146 Query 242 V-TSSVVTHPADGT--VELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTL 298 + +V+ PA GT V + GL + ++ G LE+ + LGF LP E + T+ Sbjct 147 IQVQDIVSDPASGTLRVSISGLAEAVVTPRLIDGD-LEMDPQQASVLGFQLPSEILGGTV 205 Query 299 NEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAI 336 + S+L + P GI V+V G+ F+ RD + Sbjct 206 SMMDSAL-ADLPEGIELTGVRVVDGGMTVDFAGRDVVL 242 >gi|326384034|ref|ZP_08205717.1| hypothetical protein SCNU_13914 [Gordonia neofelifaecis NRRL B-59395] gi|326197194|gb|EGD54385.1| hypothetical protein SCNU_13914 [Gordonia neofelifaecis NRRL B-59395] Length=392 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 52/240 (22%), Positives = 95/240 (40%), Gaps = 26/240 (10%) Query 105 RARRDPLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPL 164 R R T+ L+ V L++ +G ELY RH + + + + S P+ Sbjct 145 RKRGRGRTIGLIAAAVVLLIVIAGVGSELYIRHKVTNCLQTSFENLTGTGTDVSVSRKPM 204 Query 165 LLWQV-ATRHFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWS 223 LL + + + GN MQ+ + R + GT+ +LD Sbjct 205 LLTMMDGDVPWVQVDTTGGGNDT-----MQL-----HARAEGISTDGGTVKSLDGNGFLP 254 Query 224 SEGIK--ESVQNAIPILGAFVTSSVVTHPADGTVELKGLLN--------NITAKPIVAGK 273 E IK S +N P + S+ P GT++++ + +T KP++ Sbjct 255 YERIKTMSSGENGSPAI-----ESIPADPKAGTLKIETTVTVAILPVPATVTLKPVLKDG 309 Query 274 GLELQIINFNTLGFSLPKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRD 333 + ++ + L F LPK+ Q +++ T+++ I + V TG+ FS +D Sbjct 310 AVSFEVEDATALVFGLPKDFAQPIVDQVTNAMFGPLFKQIKVTKLDVGQTGIDFAFSGQD 369 >gi|172039888|ref|YP_001799602.1| hypothetical protein cur_0208 [Corynebacterium urealyticum DSM 7109] gi|171851192|emb|CAQ04168.1| hypothetical protein cu0208 [Corynebacterium urealyticum DSM 7109] Length=329 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 55/242 (23%), Positives = 99/242 (41%), Gaps = 22/242 (9%) Query 104 RRARRDPLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAP 163 + + P + +++IIV L L G Y +H + + +A + S G P Sbjct 23 EKKSKAPKVLAIIVIIVLLLALIAEFGARWYIKHEIKNSLTEASNSRTVEDPKVSLGTTP 82 Query 164 LLLWQVATRHFTNISVETAGN-----QIRD-----AKGM-QIKLTIQNVRLKNTPNSRGT 212 +LL V R ++ VE + + D GM + +T + + + TP Sbjct 83 VLLGLV-QRSLPHLEVEVPSSIDVSYEDNDPNRPVVTGMPRTHITGKKLSMGETPQDM-R 140 Query 213 IGALDATITWSSEGIK------ESVQNAIPILGAFV-TSSVVTHPADGTVELK--GLLNN 263 G L E +K +S Q+ +L + + VV +P D T+E++ G L + Sbjct 141 FGELTVDAELPKEVMKAEMIANQSGQSDDDLLNSLLQVDDVVPNPQDQTLEVQFSGGLAS 200 Query 264 ITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNEFTSSLTKNYPLGIHADSVQVTST 323 I P + L +++ G LP ++ S+ +N P G+ A V+VT+ Sbjct 201 IVMSPKIEKGQLTMEVSAVKVFGQELPDVLAEALGGAVEQSVEQNTPGGLEARDVRVTNN 260 Query 324 GV 325 G+ Sbjct 261 GL 262 >gi|317508732|ref|ZP_07966385.1| hypothetical protein HMPREF9336_02757 [Segniliparus rugosus ATCC BAA-974] gi|316252980|gb|EFV12397.1| hypothetical protein HMPREF9336_02757 [Segniliparus rugosus ATCC BAA-974] Length=447 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 55/252 (22%), Positives = 104/252 (42%), Gaps = 54/252 (21%) Query 133 LYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVETAGN-------- 184 L ARH+ +A V+ +A + + LL + +SV+ + Sbjct 199 LVARHLLAVCADEAAENVLHTKAKVDYDHSKFLLASLLDHEIPYLSVDAKNSAVDKYDRN 258 Query 185 ---QIRDA-KGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESV--------- 231 Q+++A KG+ I +++V + G++G + +TW++EGI++++ Sbjct 259 GEVQLKEAIKGLDIIAHLEDVHVT---KGGGSVGHMTTQVTWTAEGIRQTLANRDLKDPG 315 Query 232 QNAIPILGAFVTSSVVTHPADG--TVELKGLLNNITAKPIV-----AGKGLELQI----- 279 Q PI +SV P +++ G + + A+ ++ K LQI Sbjct 316 QTESPITS---VNSVKLDPEHNQFDIDVNGKIGILQARAVIIVQPEVDKQHNLQIRIKSI 372 Query 280 --------INFNTLGF--SLPKETVQSTLNEFTSSLTKNYPLGIHADSVQVTSTGVVSRF 329 I F+ GF S+ + ++ + S YP+G+ A SVQV +V +F Sbjct 373 DLPEAHNFIGFDVSGFANSIARPAIEQVAKKVAS-----YPMGLKAKSVQVKQDSIVFQF 427 Query 330 STRDAAIPTGIQ 341 DA + G + Sbjct 428 YADDAPLVKGTK 439 >gi|38232994|ref|NP_938761.1| hypothetical protein DIP0378 [Corynebacterium diphtheriae NCTC 13129] gi|38199252|emb|CAE48883.1| Putative secreted protein [Corynebacterium diphtheriae] Length=247 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 60/239 (26%), Positives = 109/239 (46%), Gaps = 45/239 (18%) Query 98 AAVKTKRRARRDPLTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATA 157 A V T + +R +++ + LI+V LV+A E R + + ++ ++ + +A+ Sbjct 2 ADVTTTKGSRVGKVSLIIALIVVILLVVA-----EFGLRAMMSQQLKESTSP----EASI 52 Query 158 SFGVAPLLLWQVATRHFTNISVET--AGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGA 215 SFG +PLL+ +AT++ +++++T G R +T++N+ + N S I Sbjct 53 SFGASPLLVG-IATKNLPSVTIDTPEMGESPRS------HITMKNLDIHN---SDAPIAE 102 Query 216 -LDATITWSSEGIKESVQNAIP------------ILGAFVTS-----SVVTHPADGTV-- 255 L T S + ++QN + LG+ + S +V T PA+ T+ Sbjct 103 QLKLETTLSDAYLLAAMQNGLAENTAPKPAAGELDLGSLLQSIVKVTAVTTQPAEKTITI 162 Query 256 ELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNEFTSSLTKNYPLGIH 314 E ++ KP+V L + +N N LGF LP QS + T L+K +H Sbjct 163 EFTNGAASLQLKPVVDNGSLGFEAVNANLLGFDLP----QSVSDALTQQLSKQAGDSLH 217 >gi|227505616|ref|ZP_03935665.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] gi|227197769|gb|EEI77817.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] Length=264 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 47/206 (23%), Positives = 88/206 (43%), Gaps = 25/206 (12%) Query 111 LTVFLVLIIVFSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVA 170 L FL+L++V + IG ++ + V + A+ +++ SFG PL++ + Sbjct 17 LVTFLILVLVAEFGMRWFIGNQMKDQFV---QAAKDEGVETQEEPDVSFGATPLVIGMLG 73 Query 171 TR-----HFTNISVETAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSE 225 + T +++ G +I+ I I+++ L + P G+L A+ + Sbjct 74 GKLSEMNMTTPSTLKIEGTEIKGQPATDIH--IEDMTLSDDP----VAGSLRASTKVPDD 127 Query 226 GIKESVQNAI------PILGAFVTSSVVTHPADGT--VELKGLLNNITAKPIVAGKGLEL 277 + + Q AI + S + + AD VE L N+ +P+ GL + Sbjct 128 FLLATFQKAIAEKSGSDQIANLAVSDITANDADNVLNVEFANGLANLALEPVARDGGLSI 187 Query 278 QIINFNTLGFSLPKE---TVQSTLNE 300 + N + LGF LP+E + S L E Sbjct 188 KAKNASLLGFELPQEATGAISSALQE 213 >gi|296393896|ref|YP_003658780.1| hypothetical protein Srot_1486 [Segniliparus rotundus DSM 44985] gi|296181043|gb|ADG97949.1| hypothetical protein Srot_1486 [Segniliparus rotundus DSM 44985] Length=416 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 44/244 (19%), Positives = 98/244 (41%), Gaps = 39/244 (15%) Query 133 LYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVETAGN-------- 184 + ARH+ +A ++ +A + LL + ++VE + Sbjct 169 VLARHLLAVCAEEAAKNILNTEAKVDYDHNKFLLASLIDHEIPYLAVEAKNSAVDKYNQH 228 Query 185 ---QIRDA-KGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESV--------- 231 ++++A KG+ + + ++ + G++G + A W+++GI++++ Sbjct 229 GQVELKEAIKGLDVSARMDDIHVV---KDGGSVGHMTAQAVWTADGIRQTLANPKLKDPN 285 Query 232 QNAIPILGAFVTSSVVTHPADGTVELKGLLNNITAKPIVAGK-------GLELQIINFNT 284 Q PI + H +V++ G + + A+ ++ K L++ I + + Sbjct 286 QTRSPITSVNAVTLDQLH-NQFSVDVNGTIGVLQARAVIVVKPEIDKQHNLQIHIQSIDL 344 Query 285 LGFSLPKETVQSTLN-------EFTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIP 337 F V +N E + +YP+G+ A SVQV +V +F +A + Sbjct 345 PDFRKIGIDVSGVVNSMARPAIEQVAGKIASYPMGLKAKSVQVKHDSIVFQFYAENAPLV 404 Query 338 TGIQ 341 G + Sbjct 405 KGTK 408 Lambda K H 0.314 0.130 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 642246772544 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40