BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0491
Length=227
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607632|ref|NP_215005.1| two component sensory transduction ... 449 1e-124
gi|15839882|ref|NP_334919.1| DNA-binding response regulator RegX... 449 1e-124
gi|121636407|ref|YP_976630.1| two component sensory transduction... 447 4e-124
gi|158429258|pdb|2OQR|A Chain A, The Structure Of The Response R... 447 7e-124
gi|224988879|ref|YP_002643566.1| two component sensory transduct... 444 3e-123
gi|41410081|ref|NP_962917.1| RegX3 [Mycobacterium avium subsp. p... 444 3e-123
gi|118619653|ref|YP_907985.1| two component sensory transduction... 444 5e-123
gi|254821074|ref|ZP_05226075.1| DNA-binding response regulator [... 443 9e-123
gi|296168092|ref|ZP_06850158.1| DNA-binding response regulator [... 443 1e-122
gi|342859008|ref|ZP_08715662.1| DNA-binding response regulator [... 443 1e-122
gi|240173513|ref|ZP_04752171.1| two-component sensory transducti... 439 1e-121
gi|120401846|ref|YP_951675.1| two component transcriptional regu... 425 3e-117
gi|254230838|ref|ZP_04924165.1| two component sensory transducti... 424 4e-117
gi|108797641|ref|YP_637838.1| two component transcriptional regu... 423 9e-117
gi|315442360|ref|YP_004075239.1| response regulator with CheY-li... 422 2e-116
gi|145220688|ref|YP_001131366.1| two component transcriptional r... 421 5e-116
gi|169631126|ref|YP_001704775.1| sensory transduction protein Re... 416 1e-114
gi|333989119|ref|YP_004521733.1| two-component sensory transduct... 408 4e-112
gi|18202894|sp|Q9F868.1|REGX3_MYCS2 RecName: Full=Sensory transd... 404 5e-111
gi|111019061|ref|YP_702033.1| response regulator, two-component ... 400 6e-110
gi|325674080|ref|ZP_08153770.1| DNA-binding response regulator [... 399 1e-109
gi|226305111|ref|YP_002765069.1| two-component response regulato... 398 3e-109
gi|54027160|ref|YP_121402.1| putative two-component system respo... 397 6e-109
gi|296138387|ref|YP_003645630.1| winged helix family two compone... 397 7e-109
gi|118470709|ref|YP_885340.1| DNA-binding response regulator Reg... 397 9e-109
gi|312141110|ref|YP_004008446.1| two component system response r... 392 2e-107
gi|289748982|ref|ZP_06508360.1| two component system sensor prot... 392 3e-107
gi|262200993|ref|YP_003272201.1| response regulator receiver [Go... 389 2e-106
gi|333918302|ref|YP_004491883.1| Two-component response regulato... 388 3e-106
gi|317507256|ref|ZP_07965002.1| response regulator receiver doma... 383 1e-104
gi|296394042|ref|YP_003658926.1| transcriptional regulator [Segn... 383 1e-104
gi|256380732|ref|YP_003104392.1| winged helix family two compone... 382 2e-104
gi|134103391|ref|YP_001109052.1| two-component response regulato... 375 3e-102
gi|325000981|ref|ZP_08122093.1| two component transcriptional re... 375 3e-102
gi|296118440|ref|ZP_06837019.1| DNA-binding response regulator R... 375 3e-102
gi|300782393|ref|YP_003762684.1| two-component system response r... 374 8e-102
gi|302523820|ref|ZP_07276162.1| phosphate regulon transcriptiona... 374 9e-102
gi|257054346|ref|YP_003132178.1| response regulator with CheY-li... 373 1e-101
gi|15828317|ref|NP_302580.1| two-component system response regul... 372 2e-101
gi|343925947|ref|ZP_08765462.1| two-component response regulator... 369 1e-100
gi|319949621|ref|ZP_08023661.1| two-component response regulator... 368 3e-100
gi|326383061|ref|ZP_08204750.1| response regulator receiver [Gor... 367 5e-100
gi|38233005|ref|NP_938772.1| putative two component system respo... 367 7e-100
gi|258655036|ref|YP_003204192.1| winged helix family two compone... 365 3e-99
gi|227505097|ref|ZP_03935146.1| response regulator [Corynebacter... 365 4e-99
gi|300857676|ref|YP_003782659.1| two-component system transcript... 363 1e-98
gi|337289923|ref|YP_004628944.1| two-component system transcript... 360 8e-98
gi|227832117|ref|YP_002833824.1| two-component system response r... 359 2e-97
gi|331699380|ref|YP_004335619.1| winged helix family two compone... 358 4e-97
gi|227541629|ref|ZP_03971678.1| response regulator [Corynebacter... 356 1e-96
>gi|15607632|ref|NP_215005.1| two component sensory transduction protein RegX3 [Mycobacterium
tuberculosis H37Rv]
gi|31791671|ref|NP_854164.1| two component sensory transduction protein RegX3 [Mycobacterium
bovis AF2122/97]
gi|148660258|ref|YP_001281781.1| two component sensory transduction protein RegX3 [Mycobacterium
tuberculosis H37Ra]
54 more sequence titles
Length=227
Score = 449 bits (1155), Expect = 1e-124, Method: Compositional matrix adjust.
Identities = 227/227 (100%), Positives = 227/227 (100%), Gaps = 0/227 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG
Sbjct 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG
Sbjct 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
Query 121 DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID
Sbjct 121 DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
Query 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
Sbjct 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
>gi|15839882|ref|NP_334919.1| DNA-binding response regulator RegX3 [Mycobacterium tuberculosis
CDC1551]
gi|308231563|ref|ZP_07412927.2| two component system sensor protein regX3 [Mycobacterium tuberculosis
SUMu001]
gi|308370423|ref|ZP_07421449.2| putative response regulator receiver domain protein [Mycobacterium
tuberculosis SUMu003]
14 more sequence titles
Length=230
Score = 449 bits (1155), Expect = 1e-124, Method: Compositional matrix adjust.
Identities = 227/227 (100%), Positives = 227/227 (100%), Gaps = 0/227 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG
Sbjct 4 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 63
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG
Sbjct 64 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 123
Query 121 DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID
Sbjct 124 DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 183
Query 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
Sbjct 184 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 230
>gi|121636407|ref|YP_976630.1| two component sensory transduction protein RegX3 [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|2190436|emb|CAA73956.1| RegX3 [Mycobacterium bovis BCG]
gi|121492054|emb|CAL70517.1| Two component sensory transduction protein regX3 (probably luxR-family)
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|341600423|emb|CCC63093.1| Two component sensory transduction protein regX3 (probably luxR-family)
[Mycobacterium bovis BCG str. Moreau RDJ]
Length=227
Score = 447 bits (1151), Expect = 4e-124, Method: Compositional matrix adjust.
Identities = 226/227 (99%), Positives = 226/227 (99%), Gaps = 0/227 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MTSVLIVEDEESLADPL FLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG
Sbjct 1 MTSVLIVEDEESLADPLTFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG
Sbjct 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
Query 121 DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID
Sbjct 121 DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
Query 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
Sbjct 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
>gi|158429258|pdb|2OQR|A Chain A, The Structure Of The Response Regulator Regx3 From Mycobacterium
Tuberculosis
Length=230
Score = 447 bits (1149), Expect = 7e-124, Method: Compositional matrix adjust.
Identities = 226/226 (100%), Positives = 226/226 (100%), Gaps = 0/226 (0%)
Query 2 TSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGT 61
TSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGT
Sbjct 5 TSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGT 64
Query 62 DVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD 121
DVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD
Sbjct 65 DVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD 124
Query 122 DDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDR 181
DDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDR
Sbjct 125 DDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDR 184
Query 182 VWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
VWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
Sbjct 185 VWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 230
>gi|224988879|ref|YP_002643566.1| two component sensory transduction protein [Mycobacterium bovis
BCG str. Tokyo 172]
gi|224771992|dbj|BAH24798.1| two component sensory transduction protein [Mycobacterium bovis
BCG str. Tokyo 172]
Length=227
Score = 444 bits (1143), Expect = 3e-123, Method: Compositional matrix adjust.
Identities = 225/227 (99%), Positives = 225/227 (99%), Gaps = 0/227 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MTSVLIVEDEESLADPL FLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG
Sbjct 1 MTSVLIVEDEESLADPLTFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG
Sbjct 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
Query 121 DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID
Sbjct 121 DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
Query 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTV GLGYKLEG
Sbjct 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVCGLGYKLEG 227
>gi|41410081|ref|NP_962917.1| RegX3 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118466224|ref|YP_883789.1| DNA-binding response regulator [Mycobacterium avium 104]
gi|254777097|ref|ZP_05218613.1| DNA-binding response regulator [Mycobacterium avium subsp. avium
ATCC 25291]
gi|41398914|gb|AAS06533.1| RegX3 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118167511|gb|ABK68408.1| DNA-binding response regulator [Mycobacterium avium 104]
gi|336460462|gb|EGO39358.1| response regulator with CheY-like receiver domain-containing
protein [Mycobacterium avium subsp. paratuberculosis S397]
Length=227
Score = 444 bits (1143), Expect = 3e-123, Method: Compositional matrix adjust.
Identities = 225/227 (99%), Positives = 226/227 (99%), Gaps = 0/227 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDG AALAEFDRAGADIVLLDLMLPGMSG
Sbjct 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGSAALAEFDRAGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG
Sbjct 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
Query 121 DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
DDDSE+SDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID
Sbjct 121 DDDSEISDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
Query 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
Sbjct 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
>gi|118619653|ref|YP_907985.1| two component sensory transduction protein RegX3 [Mycobacterium
ulcerans Agy99]
gi|183980840|ref|YP_001849131.1| two-component sensory transduction protein RegX3 [Mycobacterium
marinum M]
gi|118571763|gb|ABL06514.1| two component sensory transduction protein RegX3 [Mycobacterium
ulcerans Agy99]
gi|183174166|gb|ACC39276.1| two-component sensory transduction protein RegX3 [Mycobacterium
marinum M]
Length=227
Score = 444 bits (1142), Expect = 5e-123, Method: Compositional matrix adjust.
Identities = 224/227 (99%), Positives = 226/227 (99%), Gaps = 0/227 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDR+GADIVLLDLMLPGMSG
Sbjct 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRSGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG
Sbjct 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
Query 121 DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
DDDSE+SDGVLESGPVRMDVERHVVSVNGD ITLPLKEFDLLEYLMRNSGRVLTRGQLID
Sbjct 121 DDDSEVSDGVLESGPVRMDVERHVVSVNGDAITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
Query 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
Sbjct 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
>gi|254821074|ref|ZP_05226075.1| DNA-binding response regulator [Mycobacterium intracellulare
ATCC 13950]
Length=227
Score = 443 bits (1139), Expect = 9e-123, Method: Compositional matrix adjust.
Identities = 224/227 (99%), Positives = 226/227 (99%), Gaps = 0/227 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDG AALAEFDRAGADIVLLDLMLPGMSG
Sbjct 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGSAALAEFDRAGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG
Sbjct 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
Query 121 DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
+DDSE+SDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID
Sbjct 121 EDDSEISDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
Query 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
Sbjct 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
>gi|296168092|ref|ZP_06850158.1| DNA-binding response regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896899|gb|EFG76527.1| DNA-binding response regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=227
Score = 443 bits (1139), Expect = 1e-122, Method: Compositional matrix adjust.
Identities = 224/227 (99%), Positives = 225/227 (99%), Gaps = 0/227 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDG AALAEFDR GADIVLLDLMLPGMSG
Sbjct 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGQAALAEFDRGGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG
Sbjct 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
Query 121 DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
DDDSE+SDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID
Sbjct 121 DDDSEISDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
Query 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
Sbjct 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
>gi|342859008|ref|ZP_08715662.1| DNA-binding response regulator [Mycobacterium colombiense CECT
3035]
gi|342133249|gb|EGT86452.1| DNA-binding response regulator [Mycobacterium colombiense CECT
3035]
Length=227
Score = 443 bits (1139), Expect = 1e-122, Method: Compositional matrix adjust.
Identities = 224/227 (99%), Positives = 225/227 (99%), Gaps = 0/227 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDG AALAEFDR GADIVLLDLMLPGMSG
Sbjct 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGSAALAEFDRGGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG
Sbjct 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
Query 121 DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
DDDSE+SDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID
Sbjct 121 DDDSEISDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
Query 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
Sbjct 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
>gi|240173513|ref|ZP_04752171.1| two-component sensory transduction protein RegX3 [Mycobacterium
kansasii ATCC 12478]
Length=227
Score = 439 bits (1129), Expect = 1e-121, Method: Compositional matrix adjust.
Identities = 220/227 (97%), Positives = 225/227 (99%), Gaps = 0/227 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MT+VLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDR+GADIVLLDLMLPGMSG
Sbjct 1 MTNVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRSGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG
Sbjct 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
Query 121 DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
DDD+E SDG+LESGPVRMDVERHVVSVNG+ ITLPLKEFDLLEYLMRNSGRVLTRGQLID
Sbjct 121 DDDAESSDGILESGPVRMDVERHVVSVNGEVITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
Query 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
Sbjct 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
>gi|120401846|ref|YP_951675.1| two component transcriptional regulator [Mycobacterium vanbaalenii
PYR-1]
gi|119954664|gb|ABM11669.1| two component transcriptional regulator, winged helix family
[Mycobacterium vanbaalenii PYR-1]
Length=228
Score = 425 bits (1092), Expect = 3e-117, Method: Compositional matrix adjust.
Identities = 215/228 (95%), Positives = 222/228 (98%), Gaps = 1/228 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MTSVLIVEDEESLADPLAFLLRKEGFEATVV DGP+ALAEF+RAGADIVLLDLMLPGMSG
Sbjct 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVADGPSALAEFERAGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLR+RSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRG
Sbjct 61 TDVCKQLRSRSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGS 120
Query 121 D-DDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLI 179
D DD+ + DGVLE+GPVRMDVERHVVSVNG +ITLPLKEFDLLEYLMRNSGRVLTRGQLI
Sbjct 121 DADDAGIGDGVLEAGPVRMDVERHVVSVNGQSITLPLKEFDLLEYLMRNSGRVLTRGQLI 180
Query 180 DRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
DRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
Sbjct 181 DRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 228
>gi|254230838|ref|ZP_04924165.1| two component sensory transduction protein regX3 [Mycobacterium
tuberculosis C]
gi|124599897|gb|EAY58907.1| two component sensory transduction protein regX3 [Mycobacterium
tuberculosis C]
Length=250
Score = 424 bits (1091), Expect = 4e-117, Method: Compositional matrix adjust.
Identities = 215/215 (100%), Positives = 215/215 (100%), Gaps = 0/215 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG
Sbjct 4 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 63
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG
Sbjct 64 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 123
Query 121 DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID
Sbjct 124 DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 183
Query 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHL 215
RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHL
Sbjct 184 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHL 218
>gi|108797641|ref|YP_637838.1| two component transcriptional regulator [Mycobacterium sp. MCS]
gi|119866728|ref|YP_936680.1| two component transcriptional regulator [Mycobacterium sp. KMS]
gi|126433265|ref|YP_001068956.1| two component transcriptional regulator [Mycobacterium sp. JLS]
gi|108768060|gb|ABG06782.1| two component transcriptional regulator, winged helix family
[Mycobacterium sp. MCS]
gi|119692817|gb|ABL89890.1| two component transcriptional regulator, winged helix family
[Mycobacterium sp. KMS]
gi|126233065|gb|ABN96465.1| two component transcriptional regulator, winged helix family
[Mycobacterium sp. JLS]
Length=228
Score = 423 bits (1088), Expect = 9e-117, Method: Compositional matrix adjust.
Identities = 216/228 (95%), Positives = 220/228 (97%), Gaps = 1/228 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MTSVLIVEDEESLADPLAFLLRKEGFE TVV DGP+ALAEFDRAGADIVLLDLMLPGMSG
Sbjct 1 MTSVLIVEDEESLADPLAFLLRKEGFETTVVADGPSALAEFDRAGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRG
Sbjct 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGT 120
Query 121 D-DDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLI 179
D DD + DGVLE+GPVRMDVERHVVSVNG +ITLPLKEFDLLEYLMRNSGRVLTRGQLI
Sbjct 121 DVDDPGVPDGVLEAGPVRMDVERHVVSVNGQSITLPLKEFDLLEYLMRNSGRVLTRGQLI 180
Query 180 DRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
DRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
Sbjct 181 DRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 228
>gi|315442360|ref|YP_004075239.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Mycobacterium sp. Spyr1]
gi|315260663|gb|ADT97404.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Mycobacterium sp. Spyr1]
Length=228
Score = 422 bits (1084), Expect = 2e-116, Method: Compositional matrix adjust.
Identities = 214/228 (94%), Positives = 221/228 (97%), Gaps = 1/228 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MTSVLIVEDEESLADPLAFLLRKEGFE TVVTDGP+ALAEF+RAGADIVLLDLMLPGMSG
Sbjct 1 MTSVLIVEDEESLADPLAFLLRKEGFETTVVTDGPSALAEFERAGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLR+RSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRG
Sbjct 61 TDVCKQLRSRSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGA 120
Query 121 D-DDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLI 179
D DD ++DGVLE+GPVRMDVERHVVSVNG ITLPLKEFDLLEYLMRNSGRVLTRGQLI
Sbjct 121 DTDDVGVADGVLEAGPVRMDVERHVVSVNGSPITLPLKEFDLLEYLMRNSGRVLTRGQLI 180
Query 180 DRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
DRVWGADYVGDTKTLDVHVKRLRSKIE+DPANPVHLVTVRGLGYKLEG
Sbjct 181 DRVWGADYVGDTKTLDVHVKRLRSKIESDPANPVHLVTVRGLGYKLEG 228
>gi|145220688|ref|YP_001131366.1| two component transcriptional regulator [Mycobacterium gilvum
PYR-GCK]
gi|145213174|gb|ABP42578.1| two component transcriptional regulator, winged helix family
[Mycobacterium gilvum PYR-GCK]
Length=228
Score = 421 bits (1081), Expect = 5e-116, Method: Compositional matrix adjust.
Identities = 214/228 (94%), Positives = 221/228 (97%), Gaps = 1/228 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MTSVLIVEDEESLADPLAFLLRKEGFE TVVTDGP+ALAEF+RAGADIVLLDLMLPGMSG
Sbjct 1 MTSVLIVEDEESLADPLAFLLRKEGFETTVVTDGPSALAEFERAGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLR+RSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRG
Sbjct 61 TDVCKQLRSRSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGA 120
Query 121 D-DDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLI 179
D DD ++DGVLE+GPVRMDVERHVVSVNG ITLPLKEFDLLEYLMRNSGRVLTRGQLI
Sbjct 121 DADDLGVADGVLEAGPVRMDVERHVVSVNGAPITLPLKEFDLLEYLMRNSGRVLTRGQLI 180
Query 180 DRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
DRVWGADYVGDTKTLDVHVKRLRSKIE+DPANPVHLVTVRGLGYKLEG
Sbjct 181 DRVWGADYVGDTKTLDVHVKRLRSKIESDPANPVHLVTVRGLGYKLEG 228
>gi|169631126|ref|YP_001704775.1| sensory transduction protein RegX3 [Mycobacterium abscessus ATCC
19977]
gi|169243093|emb|CAM64121.1| Sensory transduction protein RegX3 [Mycobacterium abscessus]
Length=228
Score = 416 bits (1069), Expect = 1e-114, Method: Compositional matrix adjust.
Identities = 209/228 (92%), Positives = 219/228 (97%), Gaps = 1/228 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MTSVLIVEDE+SLADPLAFLLRKEGFEAT+V DGP+ALAEF+RAGADIVLLDLMLPGMSG
Sbjct 1 MTSVLIVEDEDSLADPLAFLLRKEGFEATIVNDGPSALAEFERAGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLRA+SSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRG
Sbjct 61 TDVCKQLRAKSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGS 120
Query 121 DDDSEMS-DGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLI 179
D + S DGVLE+GPVRMDV+RH VSVNG+ ITLPLKEFDLLEYL+RNSGRVLTRGQLI
Sbjct 121 DSEETASGDGVLEAGPVRMDVDRHTVSVNGEAITLPLKEFDLLEYLIRNSGRVLTRGQLI 180
Query 180 DRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
DRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
Sbjct 181 DRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 228
>gi|333989119|ref|YP_004521733.1| two-component sensory transduction protein RegX3 [Mycobacterium
sp. JDM601]
gi|333485087|gb|AEF34479.1| two-component sensory transduction protein RegX3 [Mycobacterium
sp. JDM601]
Length=227
Score = 408 bits (1048), Expect = 4e-112, Method: Compositional matrix adjust.
Identities = 214/227 (95%), Positives = 220/227 (97%), Gaps = 0/227 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MT VLIVEDEESLADPLAFLLRKEGFEATVVTDG AALAEFDR+GADIVLLDLMLPGMSG
Sbjct 1 MTHVLIVEDEESLADPLAFLLRKEGFEATVVTDGTAALAEFDRSGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG
Sbjct 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
Query 121 DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
DD+ + +GVLESGPVRMDVERHVV VNG+ ITLPLKEFDLLEYLMRN+GRVLTRGQLID
Sbjct 121 DDEGGVGEGVLESGPVRMDVERHVVMVNGEQITLPLKEFDLLEYLMRNTGRVLTRGQLID 180
Query 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
Sbjct 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
>gi|18202894|sp|Q9F868.1|REGX3_MYCS2 RecName: Full=Sensory transduction protein regX3
gi|9964001|gb|AAG09797.1|AF258346_2 response regulator RegX3 [Mycobacterium smegmatis str. MC2 155]
Length=228
Score = 404 bits (1038), Expect = 5e-111, Method: Compositional matrix adjust.
Identities = 212/228 (93%), Positives = 219/228 (97%), Gaps = 1/228 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MTSVLIVEDEESLADPLAFLLRKEGFEATVV DGP+ALAEF+R+GADIVLLDLMLPGMSG
Sbjct 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVGDGPSALAEFERSGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRR-G 119
TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRR
Sbjct 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGA 120
Query 120 GDDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLI 179
+DD+ DGVLE+GPVRMDVERHVVSVNG+ ITLPLKEFDLLEYLMRNSGRVLTRGQLI
Sbjct 121 DNDDAGADDGVLEAGPVRMDVERHVVSVNGEPITLPLKEFDLLEYLMRNSGRVLTRGQLI 180
Query 180 DRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
DRVWGADYVGDTKTLDVHVKRLRSKIE DPANPVHLVTVRGLGYKLEG
Sbjct 181 DRVWGADYVGDTKTLDVHVKRLRSKIEEDPANPVHLVTVRGLGYKLEG 228
>gi|111019061|ref|YP_702033.1| response regulator, two-component system [Rhodococcus jostii
RHA1]
gi|226361154|ref|YP_002778932.1| two-component response regulator RegX3 [Rhodococcus opacus B4]
gi|110818591|gb|ABG93875.1| response regulator, two-component system [Rhodococcus jostii
RHA1]
gi|226239639|dbj|BAH49987.1| two-component response regulator RegX3 [Rhodococcus opacus B4]
Length=229
Score = 400 bits (1029), Expect = 6e-110, Method: Compositional matrix adjust.
Identities = 202/229 (89%), Positives = 213/229 (94%), Gaps = 2/229 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MTSVLIVEDEESLADPLAFLLRKEGFE T+V DGP+ALAEFDRAGADIVLLDLMLPGMSG
Sbjct 1 MTSVLIVEDEESLADPLAFLLRKEGFETTIVGDGPSALAEFDRAGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLR+RS VPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRG
Sbjct 61 TDVCKQLRSRSGVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGV 120
Query 121 DDDSEMSD--GVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQL 178
D + +++ VLE+GPVRMDVERHVV VNG+ +TLPLKEFDLLEYL+RNSGRVLTRGQL
Sbjct 121 DSELDVAQDSAVLEAGPVRMDVERHVVQVNGEAVTLPLKEFDLLEYLLRNSGRVLTRGQL 180
Query 179 IDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
IDRVWGADYVGDTKTLDVHVKRLRSKIE DPA P HLVTVRGLGYKLE
Sbjct 181 IDRVWGADYVGDTKTLDVHVKRLRSKIETDPAKPEHLVTVRGLGYKLEA 229
>gi|325674080|ref|ZP_08153770.1| DNA-binding response regulator [Rhodococcus equi ATCC 33707]
gi|325555345|gb|EGD25017.1| DNA-binding response regulator [Rhodococcus equi ATCC 33707]
Length=229
Score = 399 bits (1026), Expect = 1e-109, Method: Compositional matrix adjust.
Identities = 200/228 (88%), Positives = 215/228 (95%), Gaps = 2/228 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MTSVLIVEDEESLADPLAFLLRKEGFE TVV DGP+ALAEF+R+GADIVLLD+MLPGMSG
Sbjct 1 MTSVLIVEDEESLADPLAFLLRKEGFETTVVGDGPSALAEFERSGADIVLLDVMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLRA+SSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRG
Sbjct 61 TDVCKQLRAKSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGA 120
Query 121 DDD--SEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQL 178
D++ +++ DGVL +GPVRMDVERH+V VNGD +TLPLKEFDLLEYL+RNSGRVLTRGQL
Sbjct 121 DNEAATDVDDGVLAAGPVRMDVERHLVHVNGDPVTLPLKEFDLLEYLLRNSGRVLTRGQL 180
Query 179 IDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE 226
IDRVWGADYVGDTKTLDVHVKRLR+KIE DP P HLVTVRGLGYKLE
Sbjct 181 IDRVWGADYVGDTKTLDVHVKRLRAKIEGDPGKPKHLVTVRGLGYKLE 228
>gi|226305111|ref|YP_002765069.1| two-component response regulator RegX3 [Rhodococcus erythropolis
PR4]
gi|229490687|ref|ZP_04384525.1| response regulator, two-component system [Rhodococcus erythropolis
SK121]
gi|226184226|dbj|BAH32330.1| two-component response regulator RegX3 [Rhodococcus erythropolis
PR4]
gi|229322507|gb|EEN88290.1| response regulator, two-component system [Rhodococcus erythropolis
SK121]
Length=229
Score = 398 bits (1023), Expect = 3e-109, Method: Compositional matrix adjust.
Identities = 199/229 (87%), Positives = 216/229 (95%), Gaps = 2/229 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MTSVLIVEDEESLADPLAFLLRKEGFE T+V DGP+ALAEFDR+GADIVLLDLMLPGMSG
Sbjct 1 MTSVLIVEDEESLADPLAFLLRKEGFETTIVNDGPSALAEFDRSGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCK LR+RS VPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRG
Sbjct 61 TDVCKALRSRSGVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGV 120
Query 121 DDDSEMS--DGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQL 178
+++++++ +GVLE+GPVRMDVERHVV V G+ +TLPLKEFDLLEYL+RNSGRVLTRGQL
Sbjct 121 ENEADLASDNGVLEAGPVRMDVERHVVQVAGNPVTLPLKEFDLLEYLLRNSGRVLTRGQL 180
Query 179 IDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
IDRVWGADYVGDTKTLDVHVKRLRSKIE+DPA P HLVTVRGLGYKLE
Sbjct 181 IDRVWGADYVGDTKTLDVHVKRLRSKIESDPAKPEHLVTVRGLGYKLEA 229
>gi|54027160|ref|YP_121402.1| putative two-component system response regulator [Nocardia farcinica
IFM 10152]
gi|54018668|dbj|BAD60038.1| putative two-component system response regulator [Nocardia farcinica
IFM 10152]
Length=229
Score = 397 bits (1020), Expect = 6e-109, Method: Compositional matrix adjust.
Identities = 203/228 (90%), Positives = 209/228 (92%), Gaps = 2/228 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MTSVLIVEDEESLADPLAFLLRKEGFE TVV DGP+ALAEFDR+GADIVLLDLMLPGMSG
Sbjct 1 MTSVLIVEDEESLADPLAFLLRKEGFEVTVVGDGPSALAEFDRSGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLR RS VPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRG
Sbjct 61 TDVCKQLRTRSGVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGA 120
Query 121 DD--DSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQL 178
D D GVLE+GPVRMDV+RH V VNG +TLPLKEFDLLEYL+RNSGRVLTRGQL
Sbjct 121 GDELDGNGESGVLEAGPVRMDVDRHTVMVNGKPVTLPLKEFDLLEYLLRNSGRVLTRGQL 180
Query 179 IDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE 226
IDRVWGADYVGDTKTLDVHVKRLRSKIEADPA P HLVTVRGLGYKLE
Sbjct 181 IDRVWGADYVGDTKTLDVHVKRLRSKIEADPAKPEHLVTVRGLGYKLE 228
>gi|296138387|ref|YP_003645630.1| winged helix family two component transcriptional regulator [Tsukamurella
paurometabola DSM 20162]
gi|296026521|gb|ADG77291.1| two component transcriptional regulator, winged helix family
[Tsukamurella paurometabola DSM 20162]
Length=229
Score = 397 bits (1020), Expect = 7e-109, Method: Compositional matrix adjust.
Identities = 204/228 (90%), Positives = 209/228 (92%), Gaps = 2/228 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MT VLIVEDEESLADPLAFLLRKEGFE TVVTDG AL FD AGADIVLLDLMLPGMSG
Sbjct 1 MTHVLIVEDEESLADPLAFLLRKEGFETTVVTDGAEALRHFDSAGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRG
Sbjct 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGA 120
Query 121 DD--DSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQL 178
D + DGVLE GPVRMDVERHVV+V G+ +TLPLKEFDLLEYL+RNSGRVLTRGQL
Sbjct 121 DTAGGEGLDDGVLEGGPVRMDVERHVVTVAGEAVTLPLKEFDLLEYLLRNSGRVLTRGQL 180
Query 179 IDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE 226
IDRVWGADYVGDTKTLDVHVKRLRSKIEADPANP HLVTVRGLGYKLE
Sbjct 181 IDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPKHLVTVRGLGYKLE 228
>gi|118470709|ref|YP_885340.1| DNA-binding response regulator RegX3 [Mycobacterium smegmatis
str. MC2 155]
gi|118171996|gb|ABK72892.1| DNA-binding response regulator RegX3 [Mycobacterium smegmatis
str. MC2 155]
Length=225
Score = 397 bits (1019), Expect = 9e-109, Method: Compositional matrix adjust.
Identities = 208/225 (93%), Positives = 216/225 (96%), Gaps = 1/225 (0%)
Query 4 VLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDV 63
+LIVEDEESLADPLAFLLRKEGFEATVV DGP+ALAEF+R+GADIVLLDLMLPGMSGTDV
Sbjct 1 MLIVEDEESLADPLAFLLRKEGFEATVVGDGPSALAEFERSGADIVLLDLMLPGMSGTDV 60
Query 64 CKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRR-GGDD 122
CKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRR +D
Sbjct 61 CKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGADND 120
Query 123 DSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRV 182
D+ DGVLE+GPVRMDVERHVVSVNG+ ITLPLKEFDLLEYLMRNSGRVLTRGQLIDRV
Sbjct 121 DAGADDGVLEAGPVRMDVERHVVSVNGEPITLPLKEFDLLEYLMRNSGRVLTRGQLIDRV 180
Query 183 WGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
WGADYVGDTKTLDVHVKRLRSKIE DPANPVHLVTVRGLGYKLEG
Sbjct 181 WGADYVGDTKTLDVHVKRLRSKIEEDPANPVHLVTVRGLGYKLEG 225
>gi|312141110|ref|YP_004008446.1| two component system response regulator [Rhodococcus equi 103S]
gi|311890449|emb|CBH49767.1| two component system response regulator [Rhodococcus equi 103S]
Length=226
Score = 392 bits (1007), Expect = 2e-107, Method: Compositional matrix adjust.
Identities = 196/225 (88%), Positives = 212/225 (95%), Gaps = 2/225 (0%)
Query 4 VLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDV 63
+LIVEDEESLADPLAFLLRKEGFE TVV DGP+ALAEF+R+GADIVLLD+MLPGMSGTDV
Sbjct 1 MLIVEDEESLADPLAFLLRKEGFETTVVGDGPSALAEFERSGADIVLLDVMLPGMSGTDV 60
Query 64 CKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDDD 123
CKQLRA+SSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRG D++
Sbjct 61 CKQLRAKSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGADNE 120
Query 124 --SEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDR 181
+++ DGVL +GPVRMDVERH+V VNGD +TLPLKEFDLLEYL+RNSGRVLTRGQLIDR
Sbjct 121 AATDVDDGVLAAGPVRMDVERHLVHVNGDPVTLPLKEFDLLEYLLRNSGRVLTRGQLIDR 180
Query 182 VWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE 226
VWGADYVGDTKTLDVHVKRLR+KIE DP P HLVTVRGLGYKLE
Sbjct 181 VWGADYVGDTKTLDVHVKRLRAKIEGDPGKPKHLVTVRGLGYKLE 225
>gi|289748982|ref|ZP_06508360.1| two component system sensor protein regX3 [Mycobacterium tuberculosis
T92]
gi|289689569|gb|EFD56998.1| two component system sensor protein regX3 [Mycobacterium tuberculosis
T92]
Length=198
Score = 392 bits (1006), Expect = 3e-107, Method: Compositional matrix adjust.
Identities = 197/198 (99%), Positives = 198/198 (100%), Gaps = 0/198 (0%)
Query 30 VVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVV 89
+VTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVV
Sbjct 1 MVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVV 60
Query 90 GLELGADDYVTKPYSARELIARIRAVLRRGGDDDSEMSDGVLESGPVRMDVERHVVSVNG 149
GLELGADDYVTKPYSARELIARIRAVLRRGGDDDSEMSDGVLESGPVRMDVERHVVSVNG
Sbjct 61 GLELGADDYVTKPYSARELIARIRAVLRRGGDDDSEMSDGVLESGPVRMDVERHVVSVNG 120
Query 150 DTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADP 209
DTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADP
Sbjct 121 DTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADP 180
Query 210 ANPVHLVTVRGLGYKLEG 227
ANPVHLVTVRGLGYKLEG
Sbjct 181 ANPVHLVTVRGLGYKLEG 198
>gi|262200993|ref|YP_003272201.1| response regulator receiver [Gordonia bronchialis DSM 43247]
gi|262084340|gb|ACY20308.1| response regulator receiver [Gordonia bronchialis DSM 43247]
Length=228
Score = 389 bits (999), Expect = 2e-106, Method: Compositional matrix adjust.
Identities = 194/228 (86%), Positives = 209/228 (92%), Gaps = 1/228 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MT VLIVEDEESLADPLAFLLRKEGFEA+VV DG AL+ FDR DIVLLDLMLPGMSG
Sbjct 1 MTHVLIVEDEESLADPLAFLLRKEGFEASVVNDGAQALSTFDRVSPDIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
T++CK LR RSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG
Sbjct 61 TEICKALRTRSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
Query 121 D-DDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLI 179
D + ++ G+LE+GPVRMDVERH+V+VNG+ ITLPLKEFDLLEYL+RN+GRVLTRGQLI
Sbjct 121 DLAEEDLDIGILEAGPVRMDVERHIVAVNGEQITLPLKEFDLLEYLLRNAGRVLTRGQLI 180
Query 180 DRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
DRVWGADYVGDTKTLDVHVKRLRSKIE DPANP HL+TVRGLGYKLE
Sbjct 181 DRVWGADYVGDTKTLDVHVKRLRSKIEPDPANPKHLITVRGLGYKLEA 228
>gi|333918302|ref|YP_004491883.1| Two-component response regulator RegX3 [Amycolicicoccus subflavus
DQS3-9A1]
gi|333480523|gb|AEF39083.1| Two-component response regulator RegX3 [Amycolicicoccus subflavus
DQS3-9A1]
Length=228
Score = 388 bits (997), Expect = 3e-106, Method: Compositional matrix adjust.
Identities = 195/227 (86%), Positives = 211/227 (93%), Gaps = 1/227 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MTSVLIVEDEESLADPLAFLLRKEGFE T+ DGPAAL FD AGADIVLLD+MLPGMSG
Sbjct 1 MTSVLIVEDEESLADPLAFLLRKEGFEVTIAADGPAALDSFDNAGADIVLLDIMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
T+VCKQLRARS+VPVIMVTARDSEIDKVVGLE+GADDYVTKPYS+RELIARIRAVLRRG
Sbjct 61 TEVCKQLRARSTVPVIMVTARDSEIDKVVGLEIGADDYVTKPYSSRELIARIRAVLRRGV 120
Query 121 DDDSEMS-DGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLI 179
+ ++E S D VLE+GPVRMDV+RH+V V+G ++TLPLKEFDLLEYL+RNSGRVLTRGQLI
Sbjct 121 EPEAEPSGDTVLEAGPVRMDVDRHIVQVSGASVTLPLKEFDLLEYLLRNSGRVLTRGQLI 180
Query 180 DRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE 226
DRVWGADYVGDTKTLDVHVKRLRSKIE DPA P HLVTVRGLGYKLE
Sbjct 181 DRVWGADYVGDTKTLDVHVKRLRSKIELDPAKPRHLVTVRGLGYKLE 227
>gi|317507256|ref|ZP_07965002.1| response regulator receiver domain-containing protein [Segniliparus
rugosus ATCC BAA-974]
gi|316254450|gb|EFV13774.1| response regulator receiver domain-containing protein [Segniliparus
rugosus ATCC BAA-974]
Length=228
Score = 383 bits (983), Expect = 1e-104, Method: Compositional matrix adjust.
Identities = 193/228 (85%), Positives = 204/228 (90%), Gaps = 1/228 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MT VLIVEDEESLADPLAFLLRKEGFE + DGP AL EFDR GADIVLLDLMLPGM G
Sbjct 1 MTRVLIVEDEESLADPLAFLLRKEGFETVIAGDGPTALTEFDRTGADIVLLDLMLPGMGG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
DVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSAREL ARIRAVLRRG
Sbjct 61 NDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELTARIRAVLRRGQ 120
Query 121 DDDSEMS-DGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLI 179
+ +SE S DG LE+GP+++DV+RH+VSV+G +TLPLKEFDLLEYLMRN GRVLTRGQLI
Sbjct 121 EAESETSLDGALEAGPIKLDVDRHLVSVHGKQVTLPLKEFDLLEYLMRNRGRVLTRGQLI 180
Query 180 DRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
DRVWGADYVGDTKTLDVHVKRLRSKIE DPA P LVTVRGLGYKLE
Sbjct 181 DRVWGADYVGDTKTLDVHVKRLRSKIEDDPAKPERLVTVRGLGYKLEA 228
>gi|296394042|ref|YP_003658926.1| transcriptional regulator [Segniliparus rotundus DSM 44985]
gi|296181189|gb|ADG98095.1| two component transcriptional regulator, winged helix family
[Segniliparus rotundus DSM 44985]
Length=228
Score = 383 bits (983), Expect = 1e-104, Method: Compositional matrix adjust.
Identities = 194/228 (86%), Positives = 206/228 (91%), Gaps = 1/228 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MT VLIVEDEESLADPLAFLLRKEGFE + DGPAAL EFDR+GADIVLLDLMLPGM G
Sbjct 1 MTRVLIVEDEESLADPLAFLLRKEGFETVIAGDGPAALTEFDRSGADIVLLDLMLPGMGG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
DVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSAREL ARIRAVLRRG
Sbjct 61 NDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELTARIRAVLRRGQ 120
Query 121 DDDSEMS-DGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLI 179
+ DSE S +GVLE+GP+++DV+RH+VSV+ +TLPLKEFDLLEYLMRN GRVLTRGQLI
Sbjct 121 EADSETSAEGVLEAGPIKLDVDRHLVSVHSKHVTLPLKEFDLLEYLMRNRGRVLTRGQLI 180
Query 180 DRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
DRVWGADYVGDTKTLDVHVKRLRSKIE DPA P LVTVRGLGYKLE
Sbjct 181 DRVWGADYVGDTKTLDVHVKRLRSKIEDDPAKPDRLVTVRGLGYKLEA 228
>gi|256380732|ref|YP_003104392.1| winged helix family two component transcriptional regulator [Actinosynnema
mirum DSM 43827]
gi|255925035|gb|ACU40546.1| two component transcriptional regulator, winged helix family
[Actinosynnema mirum DSM 43827]
Length=226
Score = 382 bits (980), Expect = 2e-104, Method: Compositional matrix adjust.
Identities = 192/226 (85%), Positives = 203/226 (90%), Gaps = 1/226 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MT VLIVEDEES ADPLAFLLRKEGF A + GP AL EFDR GADIVLLDLMLPGMSG
Sbjct 1 MTRVLIVEDEESFADPLAFLLRKEGFTAALAATGPEALEEFDRNGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLR RS+VPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG
Sbjct 61 TDVCKQLRQRSAVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
Query 121 DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
+ + E+ VLE+GPVRMDVERHVV+VNG+ + LPLKEFDLLEYL+RN GRVLTRGQLID
Sbjct 121 ESE-ELLPQVLEAGPVRMDVERHVVTVNGEEVALPLKEFDLLEYLLRNVGRVLTRGQLID 179
Query 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE 226
RVWGADYVGDTKTLDVHVKRLRSK+E DPA P HLVTVRGLGYK E
Sbjct 180 RVWGADYVGDTKTLDVHVKRLRSKVEPDPATPRHLVTVRGLGYKFE 225
>gi|134103391|ref|YP_001109052.1| two-component response regulator [Saccharopolyspora erythraea
NRRL 2338]
gi|291004390|ref|ZP_06562363.1| two-component response regulator [Saccharopolyspora erythraea
NRRL 2338]
gi|133916014|emb|CAM06127.1| two-component response regulator [Saccharopolyspora erythraea
NRRL 2338]
Length=226
Score = 375 bits (963), Expect = 3e-102, Method: Compositional matrix adjust.
Identities = 190/226 (85%), Positives = 204/226 (91%), Gaps = 1/226 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MT VLIVEDEES ADPLAFLLRKEGF A V T G AL EFDR GADIVLLDLMLPGMSG
Sbjct 1 MTRVLIVEDEESFADPLAFLLRKEGFTAAVATTGQEALEEFDRNGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLR RS+VPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIAR+RAVLRRGG
Sbjct 61 TDVCKQLRQRSAVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARVRAVLRRGG 120
Query 121 DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
+ + +M VLE+GPVRMDVERHVV+V+G+ ++LPLKEFDLLEYL+RN GRVLTRGQLID
Sbjct 121 EAE-DMLPQVLEAGPVRMDVERHVVTVSGEEVSLPLKEFDLLEYLLRNVGRVLTRGQLID 179
Query 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE 226
RVWGADYVGDTKTLDVHVKRLRSK+E DPA P +LVTVRGLGYK E
Sbjct 180 RVWGADYVGDTKTLDVHVKRLRSKLEPDPAEPRYLVTVRGLGYKFE 225
>gi|325000981|ref|ZP_08122093.1| two component transcriptional regulator, winged helix family
protein [Pseudonocardia sp. P1]
Length=229
Score = 375 bits (962), Expect = 3e-102, Method: Compositional matrix adjust.
Identities = 187/228 (83%), Positives = 204/228 (90%), Gaps = 2/228 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MT VLIVEDEES ADPLAF+LRKEGF V +G AL+EFDR GADIVLLDLMLPGMSG
Sbjct 1 MTRVLIVEDEESFADPLAFMLRKEGFTTAVAANGNDALSEFDRNGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCK LR+RS+VPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIAR+RAVLRRGG
Sbjct 61 TDVCKALRSRSAVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARVRAVLRRGG 120
Query 121 D--DDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQL 178
+ ++E +G+LE+GPVRMDVERHVVSVNGD + LPLKEFDLLEYL+RN GRVLTR QL
Sbjct 121 EATGETESGNGILEAGPVRMDVERHVVSVNGDDVPLPLKEFDLLEYLLRNVGRVLTRAQL 180
Query 179 IDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE 226
IDRVWGADYVGDTKTLDVHVKRLRSK+E DP+ P HLVTVRGLGYK +
Sbjct 181 IDRVWGADYVGDTKTLDVHVKRLRSKVEDDPSTPKHLVTVRGLGYKFD 228
>gi|296118440|ref|ZP_06837019.1| DNA-binding response regulator RegX3 [Corynebacterium ammoniagenes
DSM 20306]
gi|295968581|gb|EFG81827.1| DNA-binding response regulator RegX3 [Corynebacterium ammoniagenes
DSM 20306]
Length=230
Score = 375 bits (962), Expect = 3e-102, Method: Compositional matrix adjust.
Identities = 188/229 (83%), Positives = 204/229 (90%), Gaps = 3/229 (1%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MT++LIVEDEESLADPLAFLLRKEGFE V DG ALAEF+R DIVLLDLMLPGMSG
Sbjct 1 MTTILIVEDEESLADPLAFLLRKEGFEPIVAHDGKTALAEFERHDVDIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLRA SSVPVIMVTARDSEIDKVVGLELGADDYVTKPYS+RELIARIRAVLRRGG
Sbjct 61 TDVCKQLRATSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSSRELIARIRAVLRRGG 120
Query 121 DD---DSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQ 177
+ D E D +LE G VRMDVERH VSV+G+ +++PLKEFDLLEYL+RN+GRVLTRGQ
Sbjct 121 EAAEVDEEFEDQILEGGRVRMDVERHTVSVDGEPVSMPLKEFDLLEYLLRNTGRVLTRGQ 180
Query 178 LIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE 226
LIDR+WGADYVGDTKTLDVHVKRLRSKIEA+P+ P HLVTVRGLGYK E
Sbjct 181 LIDRIWGADYVGDTKTLDVHVKRLRSKIEAEPSRPQHLVTVRGLGYKYE 229
>gi|300782393|ref|YP_003762684.1| two-component system response regulator [Amycolatopsis mediterranei
U32]
gi|299791907|gb|ADJ42282.1| two-component system response regulator [Amycolatopsis mediterranei
U32]
gi|340523760|gb|AEK38965.1| two-component system response regulator [Amycolatopsis mediterranei
S699]
Length=229
Score = 374 bits (959), Expect = 8e-102, Method: Compositional matrix adjust.
Identities = 191/228 (84%), Positives = 203/228 (90%), Gaps = 2/228 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MT VLIVEDEES ADPLAFLLRKEGF A V G AAL EFDR GADIVLLDLMLPGMSG
Sbjct 1 MTRVLIVEDEESFADPLAFLLRKEGFTAAVAGTGQAALEEFDRNGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLR RS+VPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIAR+RAVLRRGG
Sbjct 61 TDVCKQLRQRSAVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARVRAVLRRGG 120
Query 121 DDDS--EMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQL 178
+ S E++ VL +GPVRMDVERHVV+V+G ++LPLKEFDLLEYL+RN GRVLTRGQL
Sbjct 121 EPGSEGELAPLVLSAGPVRMDVERHVVTVDGADVSLPLKEFDLLEYLLRNVGRVLTRGQL 180
Query 179 IDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE 226
IDRVWGADYVGDTKTLDVHVKRLRSKIE DP +P HLVTVRGLGYK E
Sbjct 181 IDRVWGADYVGDTKTLDVHVKRLRSKIEPDPGSPRHLVTVRGLGYKFE 228
>gi|302523820|ref|ZP_07276162.1| phosphate regulon transcriptional regulatory protein PhoB [Streptomyces
sp. AA4]
gi|302432715|gb|EFL04531.1| phosphate regulon transcriptional regulatory protein PhoB [Streptomyces
sp. AA4]
Length=229
Score = 374 bits (959), Expect = 9e-102, Method: Compositional matrix adjust.
Identities = 190/228 (84%), Positives = 202/228 (89%), Gaps = 2/228 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MT VLIVEDEES ADPLAFLLRKEGF A V G AL EFDR GADIVLLDLMLPGMSG
Sbjct 1 MTRVLIVEDEESFADPLAFLLRKEGFTAAVAVTGQQALEEFDRNGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLR RS+VPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIAR+RAVLRRGG
Sbjct 61 TDVCKQLRQRSAVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARVRAVLRRGG 120
Query 121 D--DDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQL 178
+ D E++ VL +GPVRMDVERHVV+V+G ++LPLKEFDLLEYL+RN GRVLTRGQL
Sbjct 121 EPGSDGELAPLVLSAGPVRMDVERHVVTVDGGEVSLPLKEFDLLEYLLRNVGRVLTRGQL 180
Query 179 IDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE 226
IDRVWGADYVGDTKTLDVHVKRLRSKIE DP +P HLVTVRGLGYK E
Sbjct 181 IDRVWGADYVGDTKTLDVHVKRLRSKIEPDPGSPRHLVTVRGLGYKFE 228
>gi|257054346|ref|YP_003132178.1| response regulator with CheY-like receiver domain-containing
protein and winged-helix DNA-binding domain-containing protein
[Saccharomonospora viridis DSM 43017]
gi|256584218|gb|ACU95351.1| response regulator with CheY-like receiver domain protein and
winged-helix DNA-binding domain protein [Saccharomonospora
viridis DSM 43017]
Length=229
Score = 373 bits (958), Expect = 1e-101, Method: Compositional matrix adjust.
Identities = 189/228 (83%), Positives = 200/228 (88%), Gaps = 2/228 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MT VLIVEDEES ADPLAFLLRKEGF A + TDG AL EFDR GADIVLLDLMLPGMSG
Sbjct 1 MTRVLIVEDEESFADPLAFLLRKEGFTAAIATDGQQALEEFDRNGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVC++LR RSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIAR+RAVLRRGG
Sbjct 61 TDVCRELRQRSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARVRAVLRRGG 120
Query 121 DD--DSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQL 178
D DS+ VL GPVRMDVERHVV+VNG + LPLKEFDLLEYL+RN GRVLTR QL
Sbjct 121 DSSGDSQQEQTVLIGGPVRMDVERHVVTVNGTEVPLPLKEFDLLEYLLRNVGRVLTRNQL 180
Query 179 IDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE 226
IDRVWGADYVGDTKTLDVHVKRLRSKIE +P +P +LVTVRGLGYK E
Sbjct 181 IDRVWGADYVGDTKTLDVHVKRLRSKIEPEPGSPRYLVTVRGLGYKFE 228
>gi|15828317|ref|NP_302580.1| two-component system response regulator [Mycobacterium leprae
TN]
gi|221230794|ref|YP_002504210.1| putative two-component system response regulator [Mycobacterium
leprae Br4923]
gi|1731206|sp|P54884.1|REGX3_MYCLE RecName: Full=Sensory transduction protein regX3
gi|467058|gb|AAA17242.1| phoP [Mycobacterium leprae]
gi|13094010|emb|CAC31956.1| probable two-component system response regulator [Mycobacterium
leprae]
gi|219933901|emb|CAR72538.1| probable two-component system response regulator [Mycobacterium
leprae Br4923]
Length=198
Score = 372 bits (955), Expect = 2e-101, Method: Compositional matrix adjust.
Identities = 188/197 (96%), Positives = 192/197 (98%), Gaps = 0/197 (0%)
Query 30 VVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVV 89
+VTDGPAALAEFDR+GADIVLLDLMLPGMSGTDV KQLR RSSVPVIMVTARDSEIDKVV
Sbjct 1 MVTDGPAALAEFDRSGADIVLLDLMLPGMSGTDVYKQLRVRSSVPVIMVTARDSEIDKVV 60
Query 90 GLELGADDYVTKPYSARELIARIRAVLRRGGDDDSEMSDGVLESGPVRMDVERHVVSVNG 149
GLELGADDYVTKPYSARELIARIRAVLRRGGDDDSE+SDGVLESGP+RMDVERHVVSVNG
Sbjct 61 GLELGADDYVTKPYSARELIARIRAVLRRGGDDDSEISDGVLESGPLRMDVERHVVSVNG 120
Query 150 DTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADP 209
ITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWG DYVGDTKTLDVHVKRLRSKIEADP
Sbjct 121 YAITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGVDYVGDTKTLDVHVKRLRSKIEADP 180
Query 210 ANPVHLVTVRGLGYKLE 226
ANPVHLVTVRGLGYKLE
Sbjct 181 ANPVHLVTVRGLGYKLE 197
>gi|343925947|ref|ZP_08765462.1| two-component response regulator RegX3 [Gordonia alkanivorans
NBRC 16433]
gi|343764298|dbj|GAA12388.1| two-component response regulator RegX3 [Gordonia alkanivorans
NBRC 16433]
Length=228
Score = 369 bits (948), Expect = 1e-100, Method: Compositional matrix adjust.
Identities = 188/228 (83%), Positives = 205/228 (90%), Gaps = 1/228 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MT VLIVEDEESLADPLAFLLRKEGFEA++V DG AL FDR DIVLLDLMLPGMSG
Sbjct 1 MTHVLIVEDEESLADPLAFLLRKEGFEASIVNDGAQALPAFDRVSPDIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRR-G 119
T++CK LRARS+VPVIMVTARD+EIDKVVGLELGADDYVTKPYSARELIARIRAVLRR
Sbjct 61 TEICKALRARSNVPVIMVTARDTEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGA 120
Query 120 GDDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLI 179
D ++ GV+E+GPVRMDVERH V+VNG+ ITLPLKEFDLLEYL+RN+GRVLTRGQLI
Sbjct 121 DAGDDDLDLGVVEAGPVRMDVERHTVAVNGEPITLPLKEFDLLEYLLRNAGRVLTRGQLI 180
Query 180 DRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
DRVWGADYVGDTKTLDVHVKRLRSKIE DPA+P HL+TVRGLGYK+E
Sbjct 181 DRVWGADYVGDTKTLDVHVKRLRSKIEPDPASPKHLITVRGLGYKIEA 228
>gi|319949621|ref|ZP_08023661.1| two-component response regulator RegX3 [Dietzia cinnamea P4]
gi|319436708|gb|EFV91788.1| two-component response regulator RegX3 [Dietzia cinnamea P4]
Length=229
Score = 368 bits (945), Expect = 3e-100, Method: Compositional matrix adjust.
Identities = 190/228 (84%), Positives = 202/228 (89%), Gaps = 2/228 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MT VLIVEDE+SLADPLAFLLRKEGFE V DGP+AL F+ GADIVLLDLMLPGMSG
Sbjct 1 MTRVLIVEDEDSLADPLAFLLRKEGFEVGVAGDGPSALESFESEGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCK+LR SSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRG
Sbjct 61 TDVCKRLRMTSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGA 120
Query 121 DDDSEMSD--GVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQL 178
+ ++E + GVLESGPVRMD+ERH V V G +TLPLKEFDLLEYL+RNSGRVLTRGQL
Sbjct 121 EAEAEPVEEIGVLESGPVRMDIERHTVMVRGAAVTLPLKEFDLLEYLLRNSGRVLTRGQL 180
Query 179 IDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE 226
IDRVWG+DYVGDTKTLDVHVKRLRSKIE DP PVHLVTVRGLGYK E
Sbjct 181 IDRVWGSDYVGDTKTLDVHVKRLRSKIETDPGKPVHLVTVRGLGYKFE 228
>gi|326383061|ref|ZP_08204750.1| response regulator receiver [Gordonia neofelifaecis NRRL B-59395]
gi|326198197|gb|EGD55382.1| response regulator receiver [Gordonia neofelifaecis NRRL B-59395]
Length=229
Score = 367 bits (943), Expect = 5e-100, Method: Compositional matrix adjust.
Identities = 182/228 (80%), Positives = 203/228 (90%), Gaps = 2/228 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MT VLIVEDEESLADPLAFLLRKEGFEA++V DG A++ F+R DIVLLDLMLPG+SG
Sbjct 1 MTHVLIVEDEESLADPLAFLLRKEGFEASIVNDGSEAVSTFERVNPDIVLLDLMLPGVSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
T++CK +RA+S+VPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG
Sbjct 61 TEICKTIRAKSAVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
Query 121 --DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQL 178
DD + + GV+E GPVRMDV+RH V+V G +TLPLKEFDLLEYL+RNSGRVLTR QL
Sbjct 121 VVADDEDAAIGVVEVGPVRMDVQRHTVTVAGTEVTLPLKEFDLLEYLLRNSGRVLTRSQL 180
Query 179 IDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE 226
IDRVWGADYVGDTKTLDVHVKRLRSK+E DP+ P HL+TVRGLGYK E
Sbjct 181 IDRVWGADYVGDTKTLDVHVKRLRSKVEPDPSQPRHLITVRGLGYKFE 228
>gi|38233005|ref|NP_938772.1| putative two component system response regulator [Corynebacterium
diphtheriae NCTC 13129]
gi|38199264|emb|CAE48895.1| Putative two component system response regulator [Corynebacterium
diphtheriae]
Length=226
Score = 367 bits (942), Expect = 7e-100, Method: Compositional matrix adjust.
Identities = 183/226 (81%), Positives = 203/226 (90%), Gaps = 1/226 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MTS+L+VEDEESLADPLAFLLRKEGF+ + DGP+AL EFDR DIVLLDLMLPGMSG
Sbjct 1 MTSILLVEDEESLADPLAFLLRKEGFDVVIAGDGPSALVEFDRNAIDIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCK+LRA SSVPVIMVTARDSEIDKVVGLELGADDYVTKPYS+RELIARIRAVLRRGG
Sbjct 61 TDVCKRLRAVSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSSRELIARIRAVLRRGG 120
Query 121 DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
+ E SD +L SG + MDVERH V+V+G+ I++PLKEFDLLEYLMRNSGRVLTRGQLID
Sbjct 121 ETIEE-SDEILGSGRIHMDVERHTVTVDGEEISMPLKEFDLLEYLMRNSGRVLTRGQLID 179
Query 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE 226
RVWGADYVGDTKTLDVH+KRLRSKIE +P+ P H++TVRGLGYK E
Sbjct 180 RVWGADYVGDTKTLDVHIKRLRSKIEPEPSAPCHVITVRGLGYKYE 225
>gi|258655036|ref|YP_003204192.1| winged helix family two component transcriptional regulator [Nakamurella
multipartita DSM 44233]
gi|258558261|gb|ACV81203.1| two component transcriptional regulator, winged helix family
[Nakamurella multipartita DSM 44233]
Length=226
Score = 365 bits (937), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 184/227 (82%), Positives = 201/227 (89%), Gaps = 1/227 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MT VLIVEDEES+A+PLAFLLRKEGF + T+GP AL FDR GADIVLLDLMLPGMSG
Sbjct 1 MTRVLIVEDEESMAEPLAFLLRKEGFSTEIATNGPDALETFDRVGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
T+VCKQLR R +VPVIMVTA+DSEIDKVVGLELGADDY+TKPYS RELIARIRAVLRRG
Sbjct 61 TEVCKQLRGRGAVPVIMVTAKDSEIDKVVGLELGADDYITKPYSTRELIARIRAVLRRGA 120
Query 121 DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
D D S VL++GPVRMDV+RHVVSV+G +LPLKEFDLLEYL+RN+GRVLTRGQLID
Sbjct 121 DADDAHSP-VLQAGPVRMDVDRHVVSVHGVPTSLPLKEFDLLEYLIRNAGRVLTRGQLID 179
Query 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
RVWGADYVGDTKTLDVHVKRLR+KIE DPA P +LVTVRGLGYKLE
Sbjct 180 RVWGADYVGDTKTLDVHVKRLRAKIEPDPAEPRYLVTVRGLGYKLEA 226
>gi|227505097|ref|ZP_03935146.1| response regulator [Corynebacterium striatum ATCC 6940]
gi|227198300|gb|EEI78348.1| response regulator [Corynebacterium striatum ATCC 6940]
Length=232
Score = 365 bits (936), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 180/231 (78%), Positives = 203/231 (88%), Gaps = 5/231 (2%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MT++LIVEDEESLADPLAFLLRKEGF+ + +DGP AL +F DIVLLDLMLPGMSG
Sbjct 1 MTNILIVEDEESLADPLAFLLRKEGFDVILASDGPTALEQFANNTVDIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLRA SSVPVIMVT+RDSEIDKVVGLELGADDYVTKPYS+RELIARIRAVLRRG
Sbjct 61 TDVCKQLRATSSVPVIMVTSRDSEIDKVVGLELGADDYVTKPYSSRELIARIRAVLRRGH 120
Query 121 DDDSE-----MSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTR 175
D +E + + +LE G VRMDVERH+V V+G+ +++PLKEFDLLEYL+RN+GRVLTR
Sbjct 121 DVSAESQEEGLEEQILEGGRVRMDVERHIVMVDGEEVSMPLKEFDLLEYLLRNAGRVLTR 180
Query 176 GQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE 226
GQLIDR+WGADYVGDTKTLDVHVKRLRSKIEA+P+ P HLVTVRGLGYK E
Sbjct 181 GQLIDRIWGADYVGDTKTLDVHVKRLRSKIEAEPSRPQHLVTVRGLGYKFE 231
>gi|300857676|ref|YP_003782659.1| two-component system transcriptional regulatory protein [Corynebacterium
pseudotuberculosis FRC41]
gi|300685130|gb|ADK28052.1| two-component system transcriptional regulatory protein [Corynebacterium
pseudotuberculosis FRC41]
gi|302205415|gb|ADL09757.1| Sensory transduction protein regX3 [Corynebacterium pseudotuberculosis
C231]
gi|302329969|gb|ADL20163.1| Sensory transduction protein regX3 [Corynebacterium pseudotuberculosis
1002]
gi|308275653|gb|ADO25552.1| Putative two component system response regulator [Corynebacterium
pseudotuberculosis I19]
gi|341824079|gb|AEK91600.1| Sensory transduction protein regX3 [Corynebacterium pseudotuberculosis
PAT10]
Length=231
Score = 363 bits (932), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 184/230 (80%), Positives = 200/230 (87%), Gaps = 4/230 (1%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
M ++L+VEDEESLADPLAFLLRKEGFE V DGP AL EF++ DIVLLDLMLPGMSG
Sbjct 1 MITILLVEDEESLADPLAFLLRKEGFEVVVAGDGPTALVEFEKNDIDIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCK+LR SSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG
Sbjct 61 TDVCKRLRKVSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
Query 121 D----DDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRG 176
+ D E D +L G VRMDVERH V+V G+ I++PLKEFDLLEYLMRNSGRVLTRG
Sbjct 121 EPQVADYEEEGDDILGGGRVRMDVERHTVTVAGENISMPLKEFDLLEYLMRNSGRVLTRG 180
Query 177 QLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE 226
QLIDR+WGADYVGDTKTLDVHVKRLRSKIE +P++P HLVTVRGLGYK E
Sbjct 181 QLIDRIWGADYVGDTKTLDVHVKRLRSKIEEEPSSPKHLVTVRGLGYKFE 230
>gi|337289923|ref|YP_004628944.1| two-component system transcriptional regulator [Corynebacterium
ulcerans BR-AD22]
gi|334696046|gb|AEG80843.1| two-component system transcriptional regulatory protein [Corynebacterium
ulcerans 809]
gi|334698229|gb|AEG83025.1| two-component system transcriptional regulatory protein [Corynebacterium
ulcerans BR-AD22]
Length=231
Score = 360 bits (924), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 183/230 (80%), Positives = 200/230 (87%), Gaps = 4/230 (1%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
M ++L+VEDEESLADPLAFLLRKEGFE V DGP AL EF++ DIVLLDLMLPGMSG
Sbjct 1 MITILLVEDEESLADPLAFLLRKEGFEVVVAGDGPTALVEFEKNDIDIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCK+LR SSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG
Sbjct 61 TDVCKRLRKVSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
Query 121 D----DDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRG 176
+ D E D +L VRMDVERH V+V G++I++PLKEFDLLEYLMRNSGRVLTRG
Sbjct 121 EQQVADYEEDGDDILGGDRVRMDVERHTVTVAGESISMPLKEFDLLEYLMRNSGRVLTRG 180
Query 177 QLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE 226
QLIDR+WGADYVGDTKTLDVHVKRLRSKIE +P++P HLVTVRGLGYK E
Sbjct 181 QLIDRIWGADYVGDTKTLDVHVKRLRSKIEEEPSSPKHLVTVRGLGYKFE 230
>gi|227832117|ref|YP_002833824.1| two-component system response regulator [Corynebacterium aurimucosum
ATCC 700975]
gi|262184032|ref|ZP_06043453.1| two-component system response regulator [Corynebacterium aurimucosum
ATCC 700975]
gi|227453133|gb|ACP31886.1| two-component system response regulator [Corynebacterium aurimucosum
ATCC 700975]
Length=232
Score = 359 bits (921), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 180/232 (78%), Positives = 199/232 (86%), Gaps = 5/232 (2%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MT++LIVEDEESLADPLAFLLRKEGF+ + DGP+AL +F DIVLLDLMLPGMSG
Sbjct 1 MTTILIVEDEESLADPLAFLLRKEGFDVLLAPDGPSALEQFAANNVDIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVCKQLR SSVPVIMVTARDSEIDKVVGLELGADDYVTKPYS+RELIARIRAVLRRG
Sbjct 61 TDVCKQLRTTSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSSRELIARIRAVLRRGQ 120
Query 121 DDDSEMS-----DGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTR 175
D SE + + +LE G VRMDVERH V V G+ +++PLKEFDLLEYL+RN+GRVLTR
Sbjct 121 DASSEHAEEEPDEQILEGGRVRMDVERHTVLVAGEPVSMPLKEFDLLEYLLRNAGRVLTR 180
Query 176 GQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
GQLIDR+WGADYVGDTKTLDVHVKRLRSKIEA+P+ P LVTVRGLGYK E
Sbjct 181 GQLIDRIWGADYVGDTKTLDVHVKRLRSKIEAEPSRPQQLVTVRGLGYKFEA 232
>gi|331699380|ref|YP_004335619.1| winged helix family two component transcriptional regulator [Pseudonocardia
dioxanivorans CB1190]
gi|326954069|gb|AEA27766.1| two component transcriptional regulator, winged helix family
[Pseudonocardia dioxanivorans CB1190]
Length=229
Score = 358 bits (918), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 187/229 (82%), Positives = 201/229 (88%), Gaps = 2/229 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
MT VLIVEDEES ADPLAFLLRKEGF A V T G +AL EFDR GADIVLLDLMLPGMSG
Sbjct 1 MTRVLIVEDEESFADPLAFLLRKEGFTAAVATTGQSALEEFDRNGADIVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRR-- 118
TDVC+ LR+RS+VPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRR
Sbjct 61 TDVCRSLRSRSAVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
Query 119 GGDDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQL 178
G ++E GVLE+GPVRMDV+RHVVSV G + LPLKEFDLLEYL+RN GRVLTRGQL
Sbjct 121 EGGAEAEGGGGVLEAGPVRMDVDRHVVSVGGADVPLPLKEFDLLEYLLRNVGRVLTRGQL 180
Query 179 IDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
IDRVWGADYVGDTKTLDVHVKRLRSK+E DP+ P HL+TVRGLGYK +
Sbjct 181 IDRVWGADYVGDTKTLDVHVKRLRSKVEVDPSVPRHLITVRGLGYKFDA 229
>gi|227541629|ref|ZP_03971678.1| response regulator [Corynebacterium glucuronolyticum ATCC 51866]
gi|227182597|gb|EEI63569.1| response regulator [Corynebacterium glucuronolyticum ATCC 51866]
Length=227
Score = 356 bits (914), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 172/227 (76%), Positives = 201/227 (89%), Gaps = 0/227 (0%)
Query 1 MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60
M +VLIVEDE SLA+PLAFLL+KEGF+A + TDG AL EF++ D+VLLDLMLPGMSG
Sbjct 1 MATVLIVEDELSLAEPLAFLLKKEGFDAIIATDGRTALVEFNKNDIDLVLLDLMLPGMSG 60
Query 61 TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG 120
TDVC++LR S+VPVIMVTARD+E+DKV+GLELGADDYVTKPYS+RELIARIRAVLRRGG
Sbjct 61 TDVCRRLRQVSTVPVIMVTARDTELDKVLGLELGADDYVTKPYSSRELIARIRAVLRRGG 120
Query 121 DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID 180
D D ++D +LE G V +DVERH+V+V+G + +PLKEFDLLEYL+RN+GRVLTRGQLID
Sbjct 121 DSDGSVADQILEGGRVSLDVERHIVTVDGQQVAMPLKEFDLLEYLLRNAGRVLTRGQLID 180
Query 181 RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227
RVWGADYVGDTKTLDVHVKRLRSKIEA+P++P LVTVRGLGYK E
Sbjct 181 RVWGADYVGDTKTLDVHVKRLRSKIEAEPSHPTQLVTVRGLGYKFEA 227
Lambda K H
0.319 0.138 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 291076174136
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40