BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0504c

Length=166
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15607645|ref|NP_215018.1|  hypothetical protein Rv0504c [Mycob...   335    1e-90
gi|289756581|ref|ZP_06515959.1|  conserved hypothetical protein [...   332    9e-90
gi|15828306|ref|NP_302569.1|  hypothetical protein ML2425 [Mycoba...   281    2e-74
gi|342858993|ref|ZP_08715647.1|  hypothetical protein MCOL_08953 ...   272    2e-71
gi|296168160|ref|ZP_06850181.1|  MaoC family dehydratase [Mycobac...   269    1e-70
gi|41410094|ref|NP_962930.1|  hypothetical protein MAP3996c [Myco...   265    2e-69
gi|254821063|ref|ZP_05226064.1|  hypothetical protein MintA_14097...   259    1e-67
gi|183980856|ref|YP_001849147.1|  hypothetical protein MMAR_0832 ...   249    1e-64
gi|118619668|ref|YP_908000.1|  hypothetical protein MUL_4576 [Myc...   247    3e-64
gi|240171909|ref|ZP_04750568.1|  hypothetical protein MkanA1_2152...   246    8e-64
gi|333989140|ref|YP_004521754.1|  hypothetical protein JDM601_050...   244    3e-63
gi|118472344|ref|YP_885351.1|  hypothetical protein MSMEG_0948 [M...   221    3e-56
gi|145220676|ref|YP_001131354.1|  MaoC-like dehydratase [Mycobact...   215    1e-54
gi|108797653|ref|YP_637850.1|  MaoC-like dehydratase [Mycobacteri...   214    2e-54
gi|120401857|ref|YP_951686.1|  MaoC-like dehydratase [Mycobacteri...   214    3e-54
gi|315442372|ref|YP_004075251.1|  acyl dehydratase [Mycobacterium...   213    1e-53
gi|169631075|ref|YP_001704724.1|  hypothetical protein MAB_3996 [...   187    4e-46
gi|15607775|ref|NP_215149.1|  (3R)-hydroxyacyl-ACP dehydratase su...   130    9e-29
gi|145225697|ref|YP_001136375.1|  (3R)-hydroxyacyl-ACP dehydratas...   129    1e-28
gi|169630977|ref|YP_001704626.1|  (3R)-hydroxyacyl-ACP dehydratas...   128    3e-28
gi|148660409|ref|YP_001281932.1|  (3R)-hydroxyacyl-ACP dehydratas...   128    3e-28
gi|315446048|ref|YP_004078927.1|  acyl dehydratase [Mycobacterium...   127    4e-28
gi|108797892|ref|YP_638089.1|  (3R)-hydroxyacyl-ACP dehydratase s...   127    4e-28
gi|126433555|ref|YP_001069246.1|  (3R)-hydroxyacyl-ACP dehydratas...   125    1e-27
gi|254823021|ref|ZP_05228022.1|  (3R)-hydroxyacyl-ACP dehydratase...   125    3e-27
gi|41410205|ref|NP_963041.1|  (3R)-hydroxyacyl-ACP dehydratase su...   125    3e-27
gi|312139230|ref|YP_004006566.1|  dehydrogenase [Rhodococcus equi...   122    1e-26
gi|15828024|ref|NP_302287.1|  (3R)-hydroxyacyl-ACP dehydratase su...   121    3e-26
gi|15607777|ref|NP_215151.1|  (3R)-hydroxyacyl-ACP dehydratase su...   121    4e-26
gi|342858866|ref|ZP_08715520.1|  (3R)-hydroxyacyl-ACP dehydratase...   120    8e-26
gi|336460573|gb|EGO39466.1|  hypothetical protein MAPs_39270 [Myc...   120    9e-26
gi|240169409|ref|ZP_04748068.1|  (3R)-hydroxyacyl-ACP dehydratase...   120    1e-25
gi|120402242|ref|YP_952071.1|  (3R)-hydroxyacyl-ACP dehydratase s...   119    2e-25
gi|15828022|ref|NP_302285.1|  (3R)-hydroxyacyl-ACP dehydratase su...   117    6e-25
gi|296168424|ref|ZP_06850304.1|  (3R)-hydroxyacyl-ACP dehydratase...   117    7e-25
gi|226305202|ref|YP_002765160.1|  beta-hydroxyacyl-[acyl-carrier-...   116    9e-25
gi|229490667|ref|ZP_04384505.1|  MaoC domain protein dehydratase ...   116    1e-24
gi|183980988|ref|YP_001849279.1|  hypothetical protein MMAR_0968 ...   115    2e-24
gi|312141019|ref|YP_004008355.1|  dehydrogenase [Rhodococcus equi...   114    5e-24
gi|240169411|ref|ZP_04748070.1|  (3R)-hydroxyacyl-ACP dehydratase...   114    7e-24
gi|118616510|ref|YP_904842.1|  (3R)-hydroxyacyl-ACP dehydratase s...   112    2e-23
gi|118473876|ref|YP_885728.1|  (3R)-hydroxyacyl-ACP dehydratase s...   112    2e-23
gi|333989298|ref|YP_004521912.1|  (3R)-hydroxyacyl-ACP dehydratas...   110    6e-23
gi|54027092|ref|YP_121334.1|  hypothetical protein nfa51180 [Noca...   108    2e-22
gi|342858864|ref|ZP_08715518.1|  (3R)-hydroxyacyl-ACP dehydratase...   108    2e-22
gi|333989300|ref|YP_004521914.1|  (3R)-hydroxyacyl-ACP dehydratas...   108    3e-22
gi|339293673|gb|AEJ45784.1|  (3R)-hydroxyacyl-ACP dehydratase sub...   107    6e-22
gi|254823019|ref|ZP_05228020.1|  (3R)-hydroxyacyl-ACP dehydratase...   106    9e-22
gi|111018980|ref|YP_701952.1|  hypothetical protein RHA1_ro01984 ...   106    9e-22
gi|336460571|gb|EGO39464.1|  acyl dehydratase [Mycobacterium aviu...   106    1e-21


>gi|15607645|ref|NP_215018.1| hypothetical protein Rv0504c [Mycobacterium tuberculosis H37Rv]
 gi|31791686|ref|NP_854179.1| hypothetical protein Mb0516c [Mycobacterium bovis AF2122/97]
 gi|121636422|ref|YP_976645.1| hypothetical protein BCG_0547c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 77 more sequence titles
 Length=166

 Score =  335 bits (859),  Expect = 1e-90, Method: Compositional matrix adjust.
 Identities = 166/166 (100%), Positives = 166/166 (100%), Gaps = 0/166 (0%)

Query  1    MTVPEEAQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPL  60
            MTVPEEAQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPL
Sbjct  1    MTVPEEAQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPL  60

Query  61   TFLAIAGRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHG  120
            TFLAIAGRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHG
Sbjct  61   TFLAIAGRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHG  120

Query  121  TVLAEIRSEVTDAEGKPVVTSVVTMLGEAAHHEADADATVAAIASI  166
            TVLAEIRSEVTDAEGKPVVTSVVTMLGEAAHHEADADATVAAIASI
Sbjct  121  TVLAEIRSEVTDAEGKPVVTSVVTMLGEAAHHEADADATVAAIASI  166


>gi|289756581|ref|ZP_06515959.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289712145|gb|EFD76157.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length=166

 Score =  332 bits (852),  Expect = 9e-90, Method: Compositional matrix adjust.
 Identities = 165/166 (99%), Positives = 165/166 (99%), Gaps = 0/166 (0%)

Query  1    MTVPEEAQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPL  60
            MTVPEEAQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHP HYSEPDAAAAGYPALVAPL
Sbjct  1    MTVPEEAQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPPHYSEPDAAAAGYPALVAPL  60

Query  61   TFLAIAGRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHG  120
            TFLAIAGRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHG
Sbjct  61   TFLAIAGRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHG  120

Query  121  TVLAEIRSEVTDAEGKPVVTSVVTMLGEAAHHEADADATVAAIASI  166
            TVLAEIRSEVTDAEGKPVVTSVVTMLGEAAHHEADADATVAAIASI
Sbjct  121  TVLAEIRSEVTDAEGKPVVTSVVTMLGEAAHHEADADATVAAIASI  166


>gi|15828306|ref|NP_302569.1| hypothetical protein ML2425 [Mycobacterium leprae TN]
 gi|221230783|ref|YP_002504199.1| hypothetical protein MLBr_02425 [Mycobacterium leprae Br4923]
 gi|1731223|sp|P54879.1|Y2425_MYCLE RecName: Full=UPF0336 protein ML2425
 gi|467070|gb|AAA17254.1| B2168_F2_80 [Mycobacterium leprae]
 gi|13093999|emb|CAC31941.1| conserved hypothetical protein [Mycobacterium leprae]
 gi|219933890|emb|CAR72523.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=166

 Score =  281 bits (720),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 138/166 (84%), Positives = 148/166 (90%), Gaps = 0/166 (0%)

Query  1    MTVPEEAQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPL  60
            MTVP EA+ LIGKHYR  DHF VGREKIREFA+AVKDDHPTHY+E  A  AGYPALVAPL
Sbjct  1    MTVPLEAEGLIGKHYRQLDHFQVGREKIREFAIAVKDDHPTHYNETAAFEAGYPALVAPL  60

Query  61   TFLAIAGRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHG  120
            TFLAIAGRRVQLEIFTKFNIPIN+ARVFHRDQKFRF+R ILA DKLYFDTYLDSVIESHG
Sbjct  61   TFLAIAGRRVQLEIFTKFNIPINVARVFHRDQKFRFYRTILAQDKLYFDTYLDSVIESHG  120

Query  121  TVLAEIRSEVTDAEGKPVVTSVVTMLGEAAHHEADADATVAAIASI  166
            TV+AE+RSEVTD EGK VVTS+VTMLGE A  +A A+ TVAAIASI
Sbjct  121  TVIAEVRSEVTDTEGKAVVTSIVTMLGELARQDATAEETVAAIASI  166


>gi|342858993|ref|ZP_08715647.1| hypothetical protein MCOL_08953 [Mycobacterium colombiense CECT 
3035]
 gi|342133234|gb|EGT86437.1| hypothetical protein MCOL_08953 [Mycobacterium colombiense CECT 
3035]
Length=173

 Score =  272 bits (695),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 131/166 (79%), Positives = 150/166 (91%), Gaps = 1/166 (0%)

Query  1    MTVPEEAQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPL  60
            MTVP+EA+ LIG HYRAPD+F VGREKIREFA A+KDDHP H+ E ++  AGY  +VAPL
Sbjct  1    MTVPKEAEGLIGSHYRAPDYFEVGREKIREFAAAIKDDHPAHFDERESKKAGYSDMVAPL  60

Query  61   TFLAIAGRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHG  120
            TFLAIAGRRVQLEIFTKF+IPINIARV HRDQKF+FHRPILA+D+LYFDTYLDSVIESHG
Sbjct  61   TFLAIAGRRVQLEIFTKFSIPINIARVIHRDQKFKFHRPILAHDRLYFDTYLDSVIESHG  120

Query  121  TVLAEIRSEVTDAEGKPVVTSVVTMLGEAAHHEADADATVAAIASI  166
            TVLAEIRSEVTDA+GKP+VTSVVTMLGE+++ E D +AT AA+ASI
Sbjct  121  TVLAEIRSEVTDADGKPIVTSVVTMLGESSNQE-DVEATAAAVASI  165


>gi|296168160|ref|ZP_06850181.1| MaoC family dehydratase [Mycobacterium parascrofulaceum ATCC 
BAA-614]
 gi|295896838|gb|EFG76467.1| MaoC family dehydratase [Mycobacterium parascrofulaceum ATCC 
BAA-614]
Length=170

 Score =  269 bits (687),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 137/166 (83%), Positives = 156/166 (94%), Gaps = 0/166 (0%)

Query  1    MTVPEEAQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPL  60
            MT+P+ A+ LIG HYRAPD+FLVGREKIREFA+A+KDDHPTH+SE DAAAAGY ALVAP+
Sbjct  1    MTIPKGAEGLIGSHYRAPDYFLVGREKIREFALAIKDDHPTHFSEADAAAAGYDALVAPV  60

Query  61   TFLAIAGRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHG  120
            TFLAIAGRRVQLEIFTKF+IPINIARV HRDQKF+FHRPI+A D+LYFDTYLDSVIESHG
Sbjct  61   TFLAIAGRRVQLEIFTKFSIPINIARVMHRDQKFKFHRPIVAGDRLYFDTYLDSVIESHG  120

Query  121  TVLAEIRSEVTDAEGKPVVTSVVTMLGEAAHHEADADATVAAIASI  166
             V+AEIRSEVTDAEG+PV+TS VTMLGEAA++EAD +ATVAA+ASI
Sbjct  121  AVIAEIRSEVTDAEGQPVITSTVTMLGEAANNEADHEATVAAVASI  166


>gi|41410094|ref|NP_962930.1| hypothetical protein MAP3996c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118467143|ref|YP_883775.1| hypothetical protein MAV_4646 [Mycobacterium avium 104]
 gi|254777084|ref|ZP_05218600.1| hypothetical protein MaviaA2_20794 [Mycobacterium avium subsp. 
avium ATCC 25291]
 gi|88964386|sp|Q73SS7.1|Y3996_MYCPA RecName: Full=UPF0336 protein MAP_3996c
 gi|41398927|gb|AAS06546.1| hypothetical protein MAP_3996c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118168430|gb|ABK69327.1| conserved hypothetical protein [Mycobacterium avium 104]
 gi|336460449|gb|EGO39345.1| MaoC-like protein [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=174

 Score =  265 bits (676),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 126/148 (86%), Positives = 140/148 (95%), Gaps = 0/148 (0%)

Query  1    MTVPEEAQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPL  60
            MTVP+EA+ LIG HYRAPD+F VGREKIREFA+AVKDDHP H+ E ++AAAGYP +VAPL
Sbjct  1    MTVPKEAEGLIGSHYRAPDYFEVGREKIREFALAVKDDHPAHFDESESAAAGYPDMVAPL  60

Query  61   TFLAIAGRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHG  120
            TFLAIAGRRVQLEIFTKF+IPINIARV HRDQKF+FHRPILA+D+LYFDTYLDSVIESHG
Sbjct  61   TFLAIAGRRVQLEIFTKFSIPINIARVIHRDQKFKFHRPILAHDRLYFDTYLDSVIESHG  120

Query  121  TVLAEIRSEVTDAEGKPVVTSVVTMLGE  148
            TVLAEIRSEVTDA+GKP+VTSVVTMLGE
Sbjct  121  TVLAEIRSEVTDADGKPIVTSVVTMLGE  148


>gi|254821063|ref|ZP_05226064.1| hypothetical protein MintA_14097 [Mycobacterium intracellulare 
ATCC 13950]
Length=173

 Score =  259 bits (662),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 123/150 (82%), Positives = 139/150 (93%), Gaps = 0/150 (0%)

Query  1    MTVPEEAQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPL  60
            MTVP+EA+ LIG HYRAPD+F VGREKIREFA+A+KDDHP H+ E ++  AGY  +VAPL
Sbjct  1    MTVPKEAEGLIGSHYRAPDYFEVGREKIREFALAIKDDHPAHFDENESRRAGYTDMVAPL  60

Query  61   TFLAIAGRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHG  120
            TFLAIAGRRVQLEIFTKF+IPINIARV HRDQKF+FHRPILA+D+L+FDTYLDSVIESHG
Sbjct  61   TFLAIAGRRVQLEIFTKFSIPINIARVIHRDQKFKFHRPILAHDRLFFDTYLDSVIESHG  120

Query  121  TVLAEIRSEVTDAEGKPVVTSVVTMLGEAA  150
            TVLAEIRSEVTDA+GKP+VTSVVTMLGEAA
Sbjct  121  TVLAEIRSEVTDADGKPIVTSVVTMLGEAA  150


>gi|183980856|ref|YP_001849147.1| hypothetical protein MMAR_0832 [Mycobacterium marinum M]
 gi|183174182|gb|ACC39292.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=166

 Score =  249 bits (635),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 120/147 (82%), Positives = 131/147 (90%), Gaps = 0/147 (0%)

Query  1    MTVPEEAQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPL  60
            MTVP EA  LIGKHY+APD+F+VGREKIREFA A++D+HP+H  E  AA  GYP LVAPL
Sbjct  1    MTVPPEAAGLIGKHYQAPDYFVVGREKIREFATAIQDEHPSHSDEAAAAELGYPELVAPL  60

Query  61   TFLAIAGRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHG  120
            TFLAIAGRRVQLEIF KFNIPINIARVFHRDQKFRF+RPI+  DKLYF TYLDSV+ESHG
Sbjct  61   TFLAIAGRRVQLEIFNKFNIPINIARVFHRDQKFRFYRPIVTGDKLYFHTYLDSVLESHG  120

Query  121  TVLAEIRSEVTDAEGKPVVTSVVTMLG  147
            TV+AEIRSEVTD EGKPVVTSVVTMLG
Sbjct  121  TVIAEIRSEVTDDEGKPVVTSVVTMLG  147


>gi|118619668|ref|YP_908000.1| hypothetical protein MUL_4576 [Mycobacterium ulcerans Agy99]
 gi|118571778|gb|ABL06529.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=166

 Score =  247 bits (631),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 119/147 (81%), Positives = 130/147 (89%), Gaps = 0/147 (0%)

Query  1    MTVPEEAQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPL  60
            MTVP EA  LIGKHY+APD+F+VGREKIREFA A++D+HP+H  E  A   GYP LVAPL
Sbjct  1    MTVPPEAAGLIGKHYQAPDYFVVGREKIREFATAIQDEHPSHSDEAAATELGYPELVAPL  60

Query  61   TFLAIAGRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHG  120
            TFLAIAGRRVQLEIF KFNIPINIARVFHRDQKFRF+RPI+  DKLYF TYLDSV+ESHG
Sbjct  61   TFLAIAGRRVQLEIFNKFNIPINIARVFHRDQKFRFYRPIVTGDKLYFHTYLDSVLESHG  120

Query  121  TVLAEIRSEVTDAEGKPVVTSVVTMLG  147
            TV+AEIRSEVTD EGKPVVTSVVTMLG
Sbjct  121  TVIAEIRSEVTDDEGKPVVTSVVTMLG  147


>gi|240171909|ref|ZP_04750568.1| hypothetical protein MkanA1_21523 [Mycobacterium kansasii ATCC 
12478]
Length=166

 Score =  246 bits (628),  Expect = 8e-64, Method: Compositional matrix adjust.
 Identities = 122/147 (83%), Positives = 133/147 (91%), Gaps = 0/147 (0%)

Query  1    MTVPEEAQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPL  60
            MTVP+EA+ LIGK+YRAPD+F VGREKIREFA AV D+HP HY +  AA AGYPALVAP 
Sbjct  1    MTVPQEAEGLIGKNYRAPDYFEVGREKIREFAAAVNDEHPAHYDDAAAADAGYPALVAPP  60

Query  61   TFLAIAGRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHG  120
            TFLA+AGRRVQ+EIFTKF+IPINIARVFHRDQKFRFHRPILA DKL+F TYLDSVIESHG
Sbjct  61   TFLAVAGRRVQMEIFTKFSIPINIARVFHRDQKFRFHRPILAGDKLFFHTYLDSVIESHG  120

Query  121  TVLAEIRSEVTDAEGKPVVTSVVTMLG  147
            TVLAEIRSEVTDA+GKPV T VVTMLG
Sbjct  121  TVLAEIRSEVTDADGKPVATGVVTMLG  147


>gi|333989140|ref|YP_004521754.1| hypothetical protein JDM601_0500 [Mycobacterium sp. JDM601]
 gi|333485108|gb|AEF34500.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=175

 Score =  244 bits (623),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 118/167 (71%), Positives = 142/167 (86%), Gaps = 1/167 (0%)

Query  1    MTVPEEAQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPL  60
            M V  E+Q +IG HYR PD+F VGREKIREFA +VKD+HP H+ E  A  AG+P LVA L
Sbjct  1    MAVHTESQGVIGTHYRFPDYFEVGREKIREFARSVKDEHPAHFDEAAATEAGHPGLVASL  60

Query  61   TFLAIAGRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHG  120
            TFLA+AGR+VQLEIF KF+IPINIARV HRDQKF FHRPI+A DKL+FDTYLDSVIESHG
Sbjct  61   TFLAVAGRQVQLEIFDKFDIPINIARVLHRDQKFTFHRPIVAGDKLFFDTYLDSVIESHG  120

Query  121  TVLAEIRSEVTDAEGKPVVTSVVTMLGEAAHHEADAD-ATVAAIASI  166
            TV++E+RSEVTDA+GKPVVTSVVTMLGE+ + +AD + AT+AA+ ++
Sbjct  121  TVVSEVRSEVTDADGKPVVTSVVTMLGESVNQDADTEAATIAALEAM  167


>gi|118472344|ref|YP_885351.1| hypothetical protein MSMEG_0948 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118173631|gb|ABK74527.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=177

 Score =  221 bits (563),  Expect = 3e-56, Method: Compositional matrix adjust.
 Identities = 101/149 (68%), Positives = 121/149 (82%), Gaps = 0/149 (0%)

Query  7    AQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIA  66
            A  +IG HYR PD+F VGREK+REF+ AVKDDHP H+ E  A   G+  L+APLTFLA+A
Sbjct  4    AANIIGTHYRYPDYFEVGREKVREFSAAVKDDHPAHFDEAAAKECGHDNLIAPLTFLAVA  63

Query  67   GRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEI  126
            GRRVQL++F KF++PIN+ RV HRDQK  FHRPI+  DKL+FD+YLDSVIESHGTV+ EI
Sbjct  64   GRRVQLDLFDKFDVPINLERVLHRDQKLIFHRPIVVGDKLWFDSYLDSVIESHGTVICEI  123

Query  127  RSEVTDAEGKPVVTSVVTMLGEAAHHEAD  155
            R+EVTD +GKPV TS+VTMLGEA   EAD
Sbjct  124  RAEVTDDDGKPVATSIVTMLGEAEIDEAD  152


>gi|145220676|ref|YP_001131354.1| MaoC-like dehydratase [Mycobacterium gilvum PYR-GCK]
 gi|145213162|gb|ABP42566.1| MaoC-like dehydratase [Mycobacterium gilvum PYR-GCK]
Length=182

 Score =  215 bits (548),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 103/159 (65%), Positives = 124/159 (78%), Gaps = 1/159 (0%)

Query  7    AQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIA  66
            A  +IG HYR PD+F V REKIREFA AVKD+HP H+ E  A   G+ AL+A LTFLA+A
Sbjct  6    AADIIGTHYRYPDYFQVDREKIREFARAVKDEHPAHHDEDAARECGHDALIASLTFLAVA  65

Query  67   GRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEI  126
            GRRVQ EIF +F++PIN+ RV HRDQK  FHRPILA DKL+FD+YLDSV ESHG VL EI
Sbjct  66   GRRVQQEIFNQFDLPINMERVLHRDQKLVFHRPILAGDKLWFDSYLDSVTESHGAVLTEI  125

Query  127  RSEVTDAEGKPVVTSVVTMLGEAAHHEADADATVAAIAS  165
            R E+TD EG P++TS+VT++GEAA HE +AD   A IA+
Sbjct  126  RGEITDDEGNPIITSIVTVMGEAA-HETEADELTAQIAA  163


>gi|108797653|ref|YP_637850.1| MaoC-like dehydratase [Mycobacterium sp. MCS]
 gi|119866740|ref|YP_936692.1| dehydratase [Mycobacterium sp. KMS]
 gi|126433277|ref|YP_001068968.1| dehydratase [Mycobacterium sp. JLS]
 gi|108768072|gb|ABG06794.1| MaoC-like dehydratase [Mycobacterium sp. MCS]
 gi|119692829|gb|ABL89902.1| MaoC domain protein dehydratase [Mycobacterium sp. KMS]
 gi|126233077|gb|ABN96477.1| MaoC domain protein dehydratase [Mycobacterium sp. JLS]
Length=177

 Score =  214 bits (546),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 101/150 (68%), Positives = 124/150 (83%), Gaps = 1/150 (0%)

Query  7    AQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIA  66
            A+ +IG HYR PD+F V REKIREFA AVKDDHP H+ E  A  +GY AL+A LTFLA+A
Sbjct  4    AEEIIGTHYRYPDYFEVDREKIREFARAVKDDHPAHHDEAAAKESGYDALIASLTFLAVA  63

Query  67   GRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEI  126
            GR+VQ EIF +F++PIN+ RV HRDQK  FHRPI+A DKL+FD+YLDSVIE+HGTV+ E+
Sbjct  64   GRKVQAEIFNQFDVPINMERVLHRDQKITFHRPIVAGDKLFFDSYLDSVIEAHGTVVTEV  123

Query  127  RSEVTDAEGKPVVTSVVTMLGEAAH-HEAD  155
            R EV+D  GKPV+TSVVT++GEAAH +EAD
Sbjct  124  RGEVSDEAGKPVLTSVVTVIGEAAHDNEAD  153


>gi|120401857|ref|YP_951686.1| MaoC-like dehydratase [Mycobacterium vanbaalenii PYR-1]
 gi|119954675|gb|ABM11680.1| MaoC-like dehydratase [Mycobacterium vanbaalenii PYR-1]
Length=180

 Score =  214 bits (545),  Expect = 3e-54, Method: Compositional matrix adjust.
 Identities = 104/159 (66%), Positives = 124/159 (78%), Gaps = 1/159 (0%)

Query  7    AQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIA  66
            A+ +IG HYR PD+F V REKIREFA AVKD+HP HY+E  A   GY ALVA LTFLA+A
Sbjct  4    AEEIIGTHYRYPDYFAVDREKIREFARAVKDEHPAHYTEEAAKEYGYDALVASLTFLAVA  63

Query  67   GRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEI  126
            GRRVQ EIF +F++PIN+ RV HRDQK  FHRPILA DKL+FD+YLDSV ESHG VL EI
Sbjct  64   GRRVQEEIFNQFDLPINMERVLHRDQKLIFHRPILAGDKLWFDSYLDSVTESHGAVLTEI  123

Query  127  RSEVTDAEGKPVVTSVVTMLGEAAHHEADADATVAAIAS  165
            R EVTD  G+PV+TS+VT++GE A  + +AD   A IA+
Sbjct  124  RGEVTDDNGEPVITSIVTVMGE-AESDTEADELTAQIAA  161


>gi|315442372|ref|YP_004075251.1| acyl dehydratase [Mycobacterium sp. Spyr1]
 gi|315260675|gb|ADT97416.1| acyl dehydratase [Mycobacterium sp. Spyr1]
Length=182

 Score =  213 bits (541),  Expect = 1e-53, Method: Compositional matrix adjust.
 Identities = 102/159 (65%), Positives = 124/159 (78%), Gaps = 1/159 (0%)

Query  7    AQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIA  66
            A  +IG HYR PD+F V REKIREFA AVKD+HP H+ E  A   G+ AL+A LTFLA+A
Sbjct  6    AADIIGTHYRYPDYFQVDREKIREFARAVKDEHPAHHDEDAARECGHDALIASLTFLAVA  65

Query  67   GRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEI  126
            GRRVQ EIF +F++PIN+ RV HRDQK  FHRPILA DKL+FD+YLDSV ESHG VL EI
Sbjct  66   GRRVQQEIFNQFDLPINMERVLHRDQKLVFHRPILAGDKLWFDSYLDSVTESHGAVLTEI  125

Query  127  RSEVTDAEGKPVVTSVVTMLGEAAHHEADADATVAAIAS  165
            R E+TD +G P++TSVVT++GEAA H+ +AD   A IA+
Sbjct  126  RGEITDDDGNPILTSVVTVMGEAA-HDTEADELTAQIAA  163


>gi|169631075|ref|YP_001704724.1| hypothetical protein MAB_3996 [Mycobacterium abscessus ATCC 19977]
 gi|169243042|emb|CAM64070.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=155

 Score =  187 bits (476),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 88/148 (60%), Positives = 111/148 (75%), Gaps = 11/148 (7%)

Query  8    QTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAG  67
            Q ++G HYR PD+F VGREK+REFA A+KD+   +             +VAP+TFLA+AG
Sbjct  5    QDIVGTHYRYPDYFEVGREKMREFAAAIKDECEVN-----------SGVVAPITFLAVAG  53

Query  68   RRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIR  127
            RRVQ +IFT+ ++PIN+ARV HRDQK +FHRPI   D+LYFD+YLDSV+ESHG V AE+R
Sbjct  54   RRVQHKIFTEMDLPINVARVLHRDQKLKFHRPIRVGDRLYFDSYLDSVLESHGMVTAEVR  113

Query  128  SEVTDAEGKPVVTSVVTMLGEAAHHEAD  155
            +EVTD  G PV TS+VTM+GEA  HE D
Sbjct  114  AEVTDENGDPVATSIVTMIGEAEGHERD  141


>gi|15607775|ref|NP_215149.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
tuberculosis H37Rv]
 gi|15840038|ref|NP_335075.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
tuberculosis CDC1551]
 gi|31791819|ref|NP_854312.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
bovis AF2122/97]
 76 more sequence titles
 Length=158

 Score =  130 bits (326),  Expect = 9e-29, Method: Compositional matrix adjust.
 Identities = 63/141 (45%), Positives = 88/141 (63%), Gaps = 0/141 (0%)

Query  10   LIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAGRR  69
            ++G HYR PDH+ V REKIRE+AVAV++D   ++ E  AA  GY  L+APLTF+ + G +
Sbjct  7    IVGMHYRYPDHYEVEREKIREYAVAVQNDDAWYFEEDGAAELGYKGLLAPLTFICVFGYK  66

Query  70   VQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIRSE  129
             Q   F   NI    A++   DQ  +F +PI+A DKLY D Y+DSV E+HGT +   ++ 
Sbjct  67   AQAAFFKHANIATAEAQIVQVDQVLKFEKPIVAGDKLYCDVYVDSVREAHGTQIIVTKNI  126

Query  130  VTDAEGKPVVTSVVTMLGEAA  150
            VT+ EG  V  +  T+ G A 
Sbjct  127  VTNEEGDLVQETYTTLAGRAG  147


>gi|145225697|ref|YP_001136375.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
gilvum PYR-GCK]
 gi|145218183|gb|ABP47587.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=159

 Score =  129 bits (324),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 61/140 (44%), Positives = 91/140 (65%), Gaps = 0/140 (0%)

Query  10   LIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAGRR  69
             +G H+R PDH++VGREKIRE+AVAVK+  P  + E  AA  G+ AL+APLTF+++ G +
Sbjct  7    FVGTHFRYPDHYVVGREKIREYAVAVKNSDPAFFDEDAAAELGHDALLAPLTFISVFGYQ  66

Query  70   VQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIRSE  129
             Q  +F   NI I+ A++   DQ  RF RPI A D+LY D ++DS+ ++HGT +   ++ 
Sbjct  67   AQWAMFAANNIGISDAKIVQVDQSLRFVRPIKAGDELYCDVWIDSIRKAHGTDIIVTKNI  126

Query  130  VTDAEGKPVVTSVVTMLGEA  149
            V++  G  V  S  T+ G +
Sbjct  127  VSNGNGDVVQESYTTLAGRS  146


>gi|169630977|ref|YP_001704626.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
abscessus ATCC 19977]
 gi|169242944|emb|CAM63972.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=156

 Score =  128 bits (321),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 66/143 (47%), Positives = 89/143 (63%), Gaps = 0/143 (0%)

Query  7    AQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIA  66
            +Q L+G HYR PDH++VGREKIRE A AVK  HP H+ E  AA  G+ ALVAP TFLA+ 
Sbjct  4    SQDLVGTHYRYPDHYVVGREKIREHAEAVKCHHPAHHDEAGAAELGHSALVAPPTFLAVF  63

Query  67   GRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEI  126
            G   Q   F   NI I   ++   DQ F++ RP+ + D LY D Y+DS+  S GT +  I
Sbjct  64   GYTAQSAFFEDANIGIKDEKIVQVDQAFKYIRPVRSGDTLYCDVYVDSIRRSFGTDIIVI  123

Query  127  RSEVTDAEGKPVVTSVVTMLGEA  149
            ++ +T+ +G+ V  S  T+ G A
Sbjct  124  KNIITNDKGEFVTESYTTLAGRA  146


>gi|148660409|ref|YP_001281932.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
tuberculosis H37Ra]
 gi|307083138|ref|ZP_07492251.1| hypothetical protein TMLG_03389 [Mycobacterium tuberculosis SUMu012]
 gi|148504561|gb|ABQ72370.1| hypothetical protein MRA_0646 [Mycobacterium tuberculosis H37Ra]
 gi|308367145|gb|EFP55996.1| hypothetical protein TMLG_03389 [Mycobacterium tuberculosis SUMu012]
Length=152

 Score =  128 bits (321),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 62/138 (45%), Positives = 87/138 (64%), Gaps = 0/138 (0%)

Query  10   LIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAGRR  69
            ++G HYR PDH+ V REKIRE+AVAV++D   ++ E  AA  GY  L+APLTF+ + G +
Sbjct  7    IVGMHYRYPDHYEVEREKIREYAVAVQNDDAWYFEEDGAAELGYKGLLAPLTFICVFGYK  66

Query  70   VQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIRSE  129
             Q   F   NI    A++   DQ  +F +PI+A DKLY D Y+DSV E+HGT +   ++ 
Sbjct  67   AQAAFFKHANIATAEAQIVQVDQVLKFEKPIVAGDKLYCDVYVDSVREAHGTQIIVTKNI  126

Query  130  VTDAEGKPVVTSVVTMLG  147
            VT+ EG  V  +  T+ G
Sbjct  127  VTNEEGDLVQETYTTLAG  144


>gi|315446048|ref|YP_004078927.1| acyl dehydratase [Mycobacterium sp. Spyr1]
 gi|315264351|gb|ADU01093.1| acyl dehydratase [Mycobacterium sp. Spyr1]
Length=159

 Score =  127 bits (320),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 61/140 (44%), Positives = 91/140 (65%), Gaps = 0/140 (0%)

Query  10   LIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAGRR  69
             +G H+R PDH++VGREKIRE+AVAVK+  P  + E  AA  G+ AL+APLTF+++ G +
Sbjct  7    FVGTHFRYPDHYVVGREKIREYAVAVKNFDPAFFDEDAAAELGHDALLAPLTFISVFGYQ  66

Query  70   VQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIRSE  129
             Q  +F   NI I+ A++   DQ  RF RPI A D+LY D ++DS+ ++HGT +   ++ 
Sbjct  67   AQWAMFAANNIGISDAKIVQVDQSLRFVRPIKAGDELYCDVWIDSIRKAHGTDIIVTKNI  126

Query  130  VTDAEGKPVVTSVVTMLGEA  149
            V++  G  V  S  T+ G +
Sbjct  127  VSNGNGDVVQESYTTLAGRS  146


>gi|108797892|ref|YP_638089.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
sp. MCS]
 gi|119866987|ref|YP_936939.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
sp. KMS]
 gi|108768311|gb|ABG07033.1| conserved hypothetical protein [Mycobacterium sp. MCS]
 gi|119693076|gb|ABL90149.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=159

 Score =  127 bits (320),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 61/139 (44%), Positives = 90/139 (65%), Gaps = 0/139 (0%)

Query  11   IGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAGRRV  70
            +G HYR PDH++VGREKIRE+AVAVK+D    + E  AA  GY AL+APLTF++I G + 
Sbjct  8    VGTHYRHPDHYVVGREKIREYAVAVKNDDAAFFDEKAAADLGYDALLAPLTFISIFGYQA  67

Query  71   QLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIRSEV  130
            QL +F    I I+ A++   DQ  +F RPI+A D L+ D Y+D++ ++HGT +   R+ +
Sbjct  68   QLAMFKANGIAISDAQIVQVDQTLKFIRPIVAGDTLHCDVYIDAIRKAHGTDIITTRNII  127

Query  131  TDAEGKPVVTSVVTMLGEA  149
            ++  G  V     T+ G +
Sbjct  128  SNENGDVVQECYTTLAGRS  146


>gi|126433555|ref|YP_001069246.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
sp. JLS]
 gi|126233355|gb|ABN96755.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=159

 Score =  125 bits (315),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 61/139 (44%), Positives = 88/139 (64%), Gaps = 0/139 (0%)

Query  11   IGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAGRRV  70
            +G HYR PDH++VGREKIRE+AVAVK+D    + E  AA  G   L+APLTF+++ G + 
Sbjct  8    VGTHYRHPDHYVVGREKIREYAVAVKNDDAAFFDEKAAAELGSDTLLAPLTFISVFGYQA  67

Query  71   QLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIRSEV  130
            Q  +F   NI I+ A++   DQ  +F RPI A D LY D Y+DS+ ++HGT +   R+ +
Sbjct  68   QYAMFEANNIAISDAQIVQVDQVLKFVRPIKAGDTLYCDVYIDSIRKAHGTDIITTRNVI  127

Query  131  TDAEGKPVVTSVVTMLGEA  149
            T+ +G  V     T+ G +
Sbjct  128  TNDKGDVVQECYTTLAGRS  146


>gi|254823021|ref|ZP_05228022.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
intracellulare ATCC 13950]
Length=159

 Score =  125 bits (313),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 65/154 (43%), Positives = 91/154 (60%), Gaps = 2/154 (1%)

Query  8    QTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAG  67
            ++++G HYR PDH+ V REKIRE+AVAVK D P ++ E  AA  GY  L APLTF+ + G
Sbjct  5    ESIVGMHYRYPDHYEVEREKIREYAVAVKHDDPAYFEEKAAADLGYSGLPAPLTFVCVFG  64

Query  68   RRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIR  127
               Q   F   N+ +  A++   DQ  +F  P++A DKLY D Y+DSV  SHGT +   +
Sbjct  65   YTAQTAFFKHANVAVQDAQIVQVDQVLKFFAPLVAGDKLYCDVYVDSVRVSHGTQIIVTK  124

Query  128  SEVTDAEGKPVVTSVVTMLGEAAH--HEADADAT  159
            + +T+  G  V  +  T+ G A     E  +DAT
Sbjct  125  NVITNEAGDVVQETYTTLAGRAGEDGEEGFSDAT  158


>gi|41410205|ref|NP_963041.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
avium subsp. paratuberculosis K-10]
 gi|118463130|ref|YP_883660.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
avium 104]
 gi|254776962|ref|ZP_05218478.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
avium subsp. avium ATCC 25291]
 gi|88964652|sp|Q73SG7.1|Y4107_MYCPA RecName: Full=UPF0336 protein MAP_4107
 gi|41399039|gb|AAS06657.1| hypothetical protein MAP_4107 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118164417|gb|ABK65314.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=159

 Score =  125 bits (313),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 64/153 (42%), Positives = 90/153 (59%), Gaps = 2/153 (1%)

Query  9    TLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAGR  68
             L+G HYR PDH+ V REKIRE+AVAV++D   ++ E  A+  GY  L+APLTF+ + G 
Sbjct  6    NLVGMHYRYPDHYEVEREKIREYAVAVQNDDAWYFEEKAASELGYKGLLAPLTFVCVFGY  65

Query  69   RVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIRS  128
              Q   F   NI +  A++   DQ  +F+ P++A DKLY D Y+DSV  SHGT +   ++
Sbjct  66   MAQSSFFKHANIAVKDAQIVQVDQVLKFYAPLVAGDKLYCDVYVDSVRVSHGTQIIVTKN  125

Query  129  EVTDAEGKPVVTSVVTMLGEAAH--HEADADAT  159
             +T+  G  V  +  T+ G A     E   DAT
Sbjct  126  VITNEAGDVVQETYTTLAGRAGEDGEEGFTDAT  158


>gi|312139230|ref|YP_004006566.1| dehydrogenase [Rhodococcus equi 103S]
 gi|325673465|ref|ZP_08153156.1| MaoC like domain protein [Rhodococcus equi ATCC 33707]
 gi|311888569|emb|CBH47881.1| putative dehydrogenase [Rhodococcus equi 103S]
 gi|325555486|gb|EGD25157.1| MaoC like domain protein [Rhodococcus equi ATCC 33707]
Length=177

 Score =  122 bits (307),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 60/144 (42%), Positives = 90/144 (63%), Gaps = 0/144 (0%)

Query  7    AQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIA  66
            A+ L+G  YR PD + VGREK+RE+A AV++ HP HY E  A   G+ ALVAPLTF+++ 
Sbjct  15   AERLVGYSYRMPDFYEVGREKVREYATAVQNAHPAHYDEQAARDLGHSALVAPLTFVSVI  74

Query  67   GRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEI  126
            G   Q  +F +     +++++   DQK  FHRPI A D+L  D  L+S  ++ G+ +   
Sbjct  75   GIIAQKYLFEQIVPGFDLSQILQTDQKLVFHRPIRAGDRLTVDVSLESFRQTAGSDIIVT  134

Query  127  RSEVTDAEGKPVVTSVVTMLGEAA  150
            ++EV D  G PVVT++ T++G   
Sbjct  135  KNEVCDDAGVPVVTTLTTLVGRTG  158


>gi|15828024|ref|NP_302287.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
leprae TN]
 gi|221230501|ref|YP_002503917.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
leprae Br4923]
 gi|115311206|sp|Q9CBJ6.1|Y1910_MYCLE RecName: Full=UPF0336 protein ML1910
 gi|13093577|emb|CAC30864.1| conserved hypothetical protein [Mycobacterium leprae]
 gi|219933608|emb|CAR72006.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=159

 Score =  121 bits (304),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 58/139 (42%), Positives = 87/139 (63%), Gaps = 0/139 (0%)

Query  9    TLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAGR  68
             ++G HYR PDH+ V REKIRE+AVAV+++  +++ E  AA  GY  L+APLTF+ + G 
Sbjct  6    NIVGMHYRYPDHYEVEREKIREYAVAVQNEDTSYFEEDAAAELGYKGLLAPLTFICLFGY  65

Query  69   RVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIRS  128
            + Q   F   NI +   ++   DQ  +F +PI+A DKLY D Y+DS+ E+HGT +   ++
Sbjct  66   KAQSAFFKHANIAVTDQQIVQIDQVLKFVKPIVAGDKLYCDVYVDSMREAHGTQIIVTKN  125

Query  129  EVTDAEGKPVVTSVVTMLG  147
             VT+  G  V  +  T+ G
Sbjct  126  VVTNEVGDIVQETYTTLAG  144


>gi|15607777|ref|NP_215151.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadC [Mycobacterium 
tuberculosis H37Rv]
 gi|15840040|ref|NP_335077.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadC [Mycobacterium 
tuberculosis CDC1551]
 gi|31791821|ref|NP_854314.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadC [Mycobacterium 
bovis AF2122/97]
 75 more sequence titles
 Length=166

 Score =  121 bits (303),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 60/143 (42%), Positives = 88/143 (62%), Gaps = 0/143 (0%)

Query  12   GKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAGRRVQ  71
            G  +R PD+F+VGRE+ REFA AVK DHP  +SE  AA  GY ALVAPLTF+ I  + VQ
Sbjct  9    GMIWRYPDYFIVGREQCREFARAVKCDHPAFFSEEAAADLGYDALVAPLTFVTILAKYVQ  68

Query  72   LEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIRSEVT  131
            L+ F   ++ +   ++   DQ+F FH+P+LA DKL+    + SV E  G  +   R+  T
Sbjct  69   LDFFRHVDVGMETMQIVQVDQRFVFHKPVLAGDKLWARMDIHSVDERFGADIVVTRNLCT  128

Query  132  DAEGKPVVTSVVTMLGEAAHHEA  154
            + +G+ V+ +  T++G+     A
Sbjct  129  NDDGELVMEAYTTLMGQQGDGSA  151


>gi|342858866|ref|ZP_08715520.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
colombiense CECT 3035]
 gi|342133107|gb|EGT86310.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
colombiense CECT 3035]
Length=159

 Score =  120 bits (300),  Expect = 8e-26, Method: Compositional matrix adjust.
 Identities = 61/155 (40%), Positives = 91/155 (59%), Gaps = 2/155 (1%)

Query  7    AQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIA  66
            +++++G HYR PDH+ V REKIRE A AV++D   ++ E  AA  GY  L+APLTF+ + 
Sbjct  4    SESIVGMHYRYPDHYEVEREKIREHATAVQNDDAWYFEEKAAAELGYKGLLAPLTFVCVF  63

Query  67   GRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEI  126
            G + Q   F   NI +  A++   DQ  ++  P++A DKLY D Y+DS+  SHGT +   
Sbjct  64   GYQAQTAFFKYANISVQDAQIVQVDQVLKYFAPLVAGDKLYCDVYVDSMRVSHGTQIIVT  123

Query  127  RSEVTDAEGKPVVTSVVTMLGEAAH--HEADADAT  159
            ++ +T+  G  V  +  T+ G A     E   DAT
Sbjct  124  KNVITNEAGDVVQETYTTLAGRAGEDGEEGFTDAT  158


>gi|336460573|gb|EGO39466.1| hypothetical protein MAPs_39270 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=150

 Score =  120 bits (300),  Expect = 9e-26, Method: Compositional matrix adjust.
 Identities = 62/148 (42%), Positives = 87/148 (59%), Gaps = 2/148 (1%)

Query  14   HYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAGRRVQLE  73
            HYR PDH+ V REKIRE+AVAV++D   ++ E  A+  GY  L+APLTF+ + G   Q  
Sbjct  2    HYRYPDHYEVEREKIREYAVAVQNDDAWYFEEKAASELGYKGLLAPLTFVCVFGYMAQSS  61

Query  74   IFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIRSEVTDA  133
             F   NI +  A++   DQ  +F+ P++A DKLY D Y+DSV  SHGT +   ++ +T+ 
Sbjct  62   FFKHANIAVKDAQIVQVDQVLKFYAPLVAGDKLYCDVYVDSVRVSHGTQIIVTKNVITNE  121

Query  134  EGKPVVTSVVTMLGEAAH--HEADADAT  159
             G  V  +  T+ G A     E   DAT
Sbjct  122  AGDVVQETYTTLAGRAGEDGEEGFTDAT  149


>gi|240169409|ref|ZP_04748068.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
kansasii ATCC 12478]
Length=159

 Score =  120 bits (300),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 58/142 (41%), Positives = 86/142 (61%), Gaps = 0/142 (0%)

Query  9    TLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAGR  68
             ++G HYR PDH+ V REKIRE A AV++D    + E  +A  GY  L+APLTF+ + G 
Sbjct  6    NIVGMHYRYPDHYEVEREKIREHAQAVQNDDAFFFDEKASAELGYDGLLAPLTFICVFGY  65

Query  69   RVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIRS  128
            + Q   F   NI +  A++   DQ  +F +PI+A DKLY D Y+DS+ E+HGT +   ++
Sbjct  66   KAQSAFFKHANIAVQDAQIVQVDQVLKFAKPIVAGDKLYCDVYVDSMREAHGTQIIVTKN  125

Query  129  EVTDAEGKPVVTSVVTMLGEAA  150
             +T+ +G  V  +  T+ G A 
Sbjct  126  IITNEDGDIVQETYTTLAGRAG  147


>gi|120402242|ref|YP_952071.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
vanbaalenii PYR-1]
 gi|119955060|gb|ABM12065.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=159

 Score =  119 bits (297),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 58/140 (42%), Positives = 88/140 (63%), Gaps = 0/140 (0%)

Query  10   LIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAGRR  69
            L+G H+R PDH++VGREKIRE+AVAVK+D    + E  A   GY +L+APLTF+++ G +
Sbjct  7    LVGSHFRYPDHYVVGREKIREYAVAVKNDDAAFFEESVADELGYDSLLAPLTFISVFGYQ  66

Query  70   VQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIRSE  129
             Q  +F   NI +  A++   DQ  +F  PI A D LY D ++DS+ ++HGT +   ++ 
Sbjct  67   AQRAMFEANNIALADAKIVQVDQVLKFVAPIKAGDTLYCDVWVDSIRKAHGTDIIVTKNI  126

Query  130  VTDAEGKPVVTSVVTMLGEA  149
            V+   G+ V  S  T+ G +
Sbjct  127  VSRENGEVVQESYTTLAGRS  146


>gi|15828022|ref|NP_302285.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadC [Mycobacterium 
leprae TN]
 gi|221230499|ref|YP_002503915.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadC [Mycobacterium 
leprae Br4923]
 gi|115311205|sp|Q9CBJ8.1|Y1908_MYCLE RecName: Full=UPF0336 protein ML1908
 gi|13093575|emb|CAC30862.1| conserved hypothetical protein [Mycobacterium leprae]
 gi|219933606|emb|CAR72004.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=166

 Score =  117 bits (293),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 54/143 (38%), Positives = 87/143 (61%), Gaps = 0/143 (0%)

Query  12   GKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAGRRVQ  71
            G  +R  D+F+VGRE+ REFA A+K DHP ++SE  AA  GY A+VAPLTF+ I  + VQ
Sbjct  9    GMVWRYSDYFIVGREQCREFARAIKCDHPAYFSEDAAAELGYDAIVAPLTFVTIFAKYVQ  68

Query  72   LEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIRSEVT  131
            L+ F   ++ +   ++   DQ+F FH+P+L  DKL+    + SV E  G  +   ++  T
Sbjct  69   LDFFRNVDVGMETMQIVQVDQRFVFHKPVLVGDKLWARMDIHSVSERFGADIVVTKNSCT  128

Query  132  DAEGKPVVTSVVTMLGEAAHHEA  154
              +G+ V+ +  T++G+   + +
Sbjct  129  SDDGELVMEAYTTLMGQQGDNSS  151


>gi|296168424|ref|ZP_06850304.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
parascrofulaceum ATCC BAA-614]
 gi|295896718|gb|EFG76353.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
parascrofulaceum ATCC BAA-614]
Length=159

 Score =  117 bits (292),  Expect = 7e-25, Method: Compositional matrix adjust.
 Identities = 61/155 (40%), Positives = 93/155 (60%), Gaps = 2/155 (1%)

Query  7    AQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIA  66
            +++++G HYR PD+++V REKIRE AVAV++D      E  AA  GY  L+APLTF+ + 
Sbjct  4    SESIVGMHYRYPDYYVVEREKIREHAVAVQNDDAAFLEEKAAAELGYDGLLAPLTFICVF  63

Query  67   GRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEI  126
            G + Q   F   N+ ++ A++   DQ  +F+ PI+A DKLY D  +DS+  SHGT +   
Sbjct  64   GYQAQTAFFKYANVAVHDAQIVQVDQVLKFNAPIVAGDKLYCDVSVDSMRISHGTQIIVT  123

Query  127  RSEVTDAEGKPVVTSVVTMLGEAAH--HEADADAT  159
            ++ +T+  G  V  +  T+ G A     E  +DAT
Sbjct  124  KNVITNEAGDVVQETYTTLAGRAGDDGEEGFSDAT  158


>gi|226305202|ref|YP_002765160.1| beta-hydroxyacyl-[acyl-carrier-protein] dehydratase subunit HadA 
[Rhodococcus erythropolis PR4]
 gi|226184317|dbj|BAH32421.1| beta-hydroxyacyl-[acyl-carrier-protein] dehydratase subunit HadA 
[Rhodococcus erythropolis PR4]
Length=184

 Score =  116 bits (291),  Expect = 9e-25, Method: Compositional matrix adjust.
 Identities = 53/140 (38%), Positives = 85/140 (61%), Gaps = 0/140 (0%)

Query  7    AQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIA  66
            A  ++G HYR  D + VGREK+REFA AV+D HP HY E  A   GY  L+AP+TF+AI 
Sbjct  21   AVQMVGHHYRVEDFYEVGREKVREFARAVQDAHPAHYDESAAKGLGYDGLIAPITFVAIV  80

Query  67   GRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEI  126
            G   Q  +F +     +++++   DQ+   H+P+   D+L+ D +LDS  ++ G+ +   
Sbjct  81   GAIAQRRLFEEIVTGYDLSQILQTDQRLVLHKPMQVGDRLFCDVFLDSFRQAAGSDIIVT  140

Query  127  RSEVTDAEGKPVVTSVVTML  146
            ++ +TD   + VVT+  T++
Sbjct  141  KNIITDQNDEAVVTTWTTLV  160


>gi|229490667|ref|ZP_04384505.1| MaoC domain protein dehydratase [Rhodococcus erythropolis SK121]
 gi|229322487|gb|EEN88270.1| MaoC domain protein dehydratase [Rhodococcus erythropolis SK121]
Length=161

 Score =  116 bits (291),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 52/137 (38%), Positives = 84/137 (62%), Gaps = 0/137 (0%)

Query  10   LIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAGRR  69
            ++G HYR  D + VGREK+REFA AV+D HP HY E  A   GY  L+AP+TF+AI G  
Sbjct  1    MVGHHYRVEDFYEVGREKVREFARAVQDAHPAHYDESAAKGLGYDGLIAPITFVAIVGAI  60

Query  70   VQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIRSE  129
             Q  +F +     +++++   DQ+   H+P+   D+L+ D +LDS  ++ G+ +   ++ 
Sbjct  61   AQRRLFEEIVTGYDLSQILQTDQRLVLHKPMQVGDRLFCDVFLDSFRQAAGSDIIVTKNI  120

Query  130  VTDAEGKPVVTSVVTML  146
            +TD   + VVT+  T++
Sbjct  121  ITDQNDEAVVTTWTTLV  137


>gi|183980988|ref|YP_001849279.1| hypothetical protein MMAR_0968 [Mycobacterium marinum M]
 gi|183174314|gb|ACC39424.1| conserved protein [Mycobacterium marinum M]
Length=159

 Score =  115 bits (288),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 56/140 (40%), Positives = 90/140 (65%), Gaps = 0/140 (0%)

Query  8    QTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAG  67
            + ++G H+R PDH++V REKIRE+AVAV +D  + + E  AA  G+  L+APLTF+++ G
Sbjct  5    EDIVGMHFRYPDHYVVEREKIREYAVAVLNDDASFFEEGAAADLGHKGLLAPLTFISVFG  64

Query  68   RRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIR  127
             + Q   F   NI ++  ++   DQ  +F +PI+A D L+ D ++DSV E+HGT +   R
Sbjct  65   YKAQSAFFKHANIGVSDQQIVQVDQVLKFSKPIVAGDILHCDVHVDSVREAHGTQIIVTR  124

Query  128  SEVTDAEGKPVVTSVVTMLG  147
            + VT+  G+ V  ++ T+ G
Sbjct  125  NIVTNEAGEIVQETLTTLAG  144


>gi|312141019|ref|YP_004008355.1| dehydrogenase [Rhodococcus equi 103S]
 gi|325675344|ref|ZP_08155028.1| MaoC like domain protein [Rhodococcus equi ATCC 33707]
 gi|311890358|emb|CBH49676.1| putative dehydrogenase [Rhodococcus equi 103S]
 gi|325553315|gb|EGD22993.1| MaoC like domain protein [Rhodococcus equi ATCC 33707]
Length=182

 Score =  114 bits (285),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 52/144 (37%), Positives = 87/144 (61%), Gaps = 0/144 (0%)

Query  7    AQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIA  66
            A +++G HYR  D + +GREK+RE+A AV D+HP H+ E  A   GY  L+AP TF++I 
Sbjct  19   AASMVGHHYRVSDFYEIGREKVREYARAVLDNHPAHHDEEAAKGLGYDGLIAPPTFVSIV  78

Query  67   GRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEI  126
            G   Q ++F +     +++++   DQ+  FHRP+ A D+L  D YL+S  +  G+ +   
Sbjct  79   GMLAQRKLFEEVVTGYDLSQIMQTDQRLVFHRPLKAGDRLICDVYLESFRQVAGSDIIVT  138

Query  127  RSEVTDAEGKPVVTSVVTMLGEAA  150
            ++ +TD  G+ V T+  T++  + 
Sbjct  139  KNVITDVNGELVQTTWTTLVARSG  162


>gi|240169411|ref|ZP_04748070.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadC [Mycobacterium 
kansasii ATCC 12478]
Length=166

 Score =  114 bits (284),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 53/143 (38%), Positives = 87/143 (61%), Gaps = 0/143 (0%)

Query  12   GKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAGRRVQ  71
            G  +R PD+F+VGRE++R+FA A+K DHP ++ E  AA  GY A+VAP+TF+ I  + VQ
Sbjct  9    GMIWRYPDYFIVGREQLRQFAQAIKCDHPAYFEEDAAAELGYDAIVAPMTFVTILAKLVQ  68

Query  72   LEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIRSEVT  131
            L+ F   +I +   ++   DQ+F F++P+LA DKL+    + SV E  G  +   ++   
Sbjct  69   LDFFRNVDIGMETMQIVQVDQRFVFYKPVLAGDKLWARMDIHSVDERFGADIVVTKNTCH  128

Query  132  DAEGKPVVTSVVTMLGEAAHHEA  154
            +  G+ V+ +  T++G+     A
Sbjct  129  NDNGELVLEAYTTLMGQQGDGSA  151


>gi|118616510|ref|YP_904842.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
ulcerans Agy99]
 gi|118568620|gb|ABL03371.1| conserved protein [Mycobacterium ulcerans Agy99]
Length=159

 Score =  112 bits (280),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 55/140 (40%), Positives = 89/140 (64%), Gaps = 0/140 (0%)

Query  8    QTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAG  67
            + ++G H+R PDH++V REKIRE+AVAV +D  + + E  AA  G+  L+APLTF+++ G
Sbjct  5    EDIVGMHFRYPDHYVVEREKIREYAVAVLNDDASFFEEGAAADLGHKGLLAPLTFISVFG  64

Query  68   RRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIR  127
             + Q   F   NI ++  ++   DQ  +F +PI+A D L+ D ++DSV E+H T +   R
Sbjct  65   YKAQSAFFKHANIGVSDQQIVQVDQVLKFSKPIVAGDILHCDVHVDSVREAHDTQIIVTR  124

Query  128  SEVTDAEGKPVVTSVVTMLG  147
            + VT+  G+ V  ++ T+ G
Sbjct  125  NIVTNEAGEIVQETLTTLAG  144


>gi|118473876|ref|YP_885728.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
smegmatis str. MC2 155]
 gi|118175163|gb|ABK76059.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=158

 Score =  112 bits (279),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 58/147 (40%), Positives = 87/147 (60%), Gaps = 0/147 (0%)

Query  7    AQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIA  66
            +  ++G HYR PD + VGREKIRE A+A+K+D    Y E  AA  G+ AL APLTF+ I 
Sbjct  4    SSKIVGMHYRYPDFYEVGREKIREHALAIKNDETYFYDEDAAAELGHDALPAPLTFICIF  63

Query  67   GRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEI  126
            G + Q   F   +I +  A++   DQ+ +F +PI A D+LY D Y+ +V  +HGT +   
Sbjct  64   GYQAQSAFFDHADIGVREAKIVQVDQELKFFKPIKAGDRLYCDVYVHAVRRAHGTDIIVT  123

Query  127  RSEVTDAEGKPVVTSVVTMLGEAAHHE  153
            ++ +T+  G+ V  +  T+ G A   E
Sbjct  124  KNIITNDAGEIVQEAYTTLAGRAGDGE  150


>gi|333989298|ref|YP_004521912.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
sp. JDM601]
 gi|333485266|gb|AEF34658.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadA [Mycobacterium 
sp. JDM601]
Length=158

 Score =  110 bits (276),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 58/144 (41%), Positives = 83/144 (58%), Gaps = 0/144 (0%)

Query  7    AQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIA  66
            A+ L G HYR PDH+ V REKIRE+A AVK   P  +    AA  GY  L+APLT++++ 
Sbjct  4    AERLAGAHYRYPDHYEVEREKIREYARAVKAVDPASFHLRAAAGLGYDGLLAPLTYISVF  63

Query  67   GRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEI  126
            G +     F    + ++ A++   DQK  FH+PI   D+LY D  ++SV  +HGT +   
Sbjct  64   GHKAISAFFEHVGVAVDDAQIVQVDQKLEFHQPIKEGDRLYCDVSVESVRRAHGTDIIMT  123

Query  127  RSEVTDAEGKPVVTSVVTMLGEAA  150
            R  VT+A G+ V  +  T+ G A 
Sbjct  124  RQVVTNAAGEIVQETYTTLAGRAG  147


>gi|54027092|ref|YP_121334.1| hypothetical protein nfa51180 [Nocardia farcinica IFM 10152]
 gi|54018600|dbj|BAD59970.1| putative dehydratase [Nocardia farcinica IFM 10152]
Length=356

 Score =  108 bits (271),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 53/141 (38%), Positives = 83/141 (59%), Gaps = 0/141 (0%)

Query  10   LIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAGRR  69
            ++G HYR  D++ VGREK+RE+A AV+D HP H+ E  A   GY  LVAPLTF+++ G  
Sbjct  25   MVGHHYRVDDYYEVGREKVREYARAVQDYHPVHWDEDVAQEYGYDGLVAPLTFISLVGIL  84

Query  70   VQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIRSE  129
             Q ++F       +++++   DQ   FHRPI   D+L  D YL S  ++ G  +   ++ 
Sbjct  85   AQRKLFETVVTGYDLSQIMQTDQILEFHRPIKVGDQLTCDVYLHSFRQAFGGDIIVTKNI  144

Query  130  VTDAEGKPVVTSVVTMLGEAA  150
            VT    + V+T+  T++G + 
Sbjct  145  VTAQNDELVLTTYTTLVGRSG  165


>gi|342858864|ref|ZP_08715518.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadC [Mycobacterium 
colombiense CECT 3035]
 gi|342133105|gb|EGT86308.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadC [Mycobacterium 
colombiense CECT 3035]
Length=166

 Score =  108 bits (271),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 54/144 (38%), Positives = 88/144 (62%), Gaps = 0/144 (0%)

Query  12   GKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAGRRVQ  71
            G  +R PD+F+VGRE++R+FA+++K+ HP H+ E  AA  G+ A+VAPLTF  I  + VQ
Sbjct  9    GMIWRYPDYFVVGREQLRQFALSIKNRHPAHFEEDAAAELGHDAIVAPLTFGTIFAKLVQ  68

Query  72   LEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIRSEVT  131
            L+ F   +I +    +   DQ+F F +PI A DKL+    + SV E  G  +   ++  T
Sbjct  69   LDFFRHVDIGMETLVIVQVDQRFVFSKPIKAGDKLWARMDIQSVDERFGADIVVTKNICT  128

Query  132  DAEGKPVVTSVVTMLGEAAHHEAD  155
            +  G+ V+ +  T++G+ A + A+
Sbjct  129  NEHGEVVLEAYTTLMGQYADNSAN  152


>gi|333989300|ref|YP_004521914.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadC [Mycobacterium 
sp. JDM601]
 gi|333485268|gb|AEF34660.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadC [Mycobacterium 
sp. JDM601]
Length=166

 Score =  108 bits (269),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 61/144 (43%), Positives = 81/144 (57%), Gaps = 4/144 (2%)

Query  12   GKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAGRRVQ  71
            G  +R P+ F+VGREKIREFA AVK + P  Y E  AA  GY  L+APLT++AI  + VQ
Sbjct  9    GLIWRYPEPFVVGREKIREFANAVKAEDPACYDEKAAAELGYDGLLAPLTYVAILAKLVQ  68

Query  72   LEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIRSEVT  131
             + F   +      ++   DQ F FHRPI A D LY    + SV E  G  +   R+ +T
Sbjct  69   SDFFRNVDTGYTTMQMVQVDQGFTFHRPIKAGDILYARMEIASVNERFGADIVTTRNILT  128

Query  132  DAEGKPVVTSVVTMLGEAAHHEAD  155
            D +G  V+ +  TM+G    HE D
Sbjct  129  DPDGDVVLEAFTTMMG----HEGD  148


>gi|339293673|gb|AEJ45784.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadC [Mycobacterium 
tuberculosis CCDC5079]
Length=147

 Score =  107 bits (267),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 54/132 (41%), Positives = 80/132 (61%), Gaps = 0/132 (0%)

Query  23   VGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAGRRVQLEIFTKFNIPI  82
            +GRE+ REFA AVK DHP  +SE  AA  GY ALVAPLTF+ I  + VQL+ F   ++ +
Sbjct  1    MGREQCREFARAVKCDHPAFFSEEAAADLGYDALVAPLTFVTILAKYVQLDFFRHVDVGM  60

Query  83   NIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIRSEVTDAEGKPVVTSV  142
               ++   DQ+F FH+P+LA DKL+    + SV E  G  +   R+  T+ +G+ V+ + 
Sbjct  61   ETMQIVQVDQRFVFHKPVLAGDKLWARMDIHSVDERFGADIVVTRNLCTNDDGELVMEAY  120

Query  143  VTMLGEAAHHEA  154
             T++G+     A
Sbjct  121  TTLMGQQGDGSA  132


>gi|254823019|ref|ZP_05228020.1| (3R)-hydroxyacyl-ACP dehydratase subunit HadC [Mycobacterium 
intracellulare ATCC 13950]
Length=166

 Score =  106 bits (265),  Expect = 9e-22, Method: Compositional matrix adjust.
 Identities = 53/144 (37%), Positives = 87/144 (61%), Gaps = 0/144 (0%)

Query  12   GKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAGRRVQ  71
            G  +R PD+F+VGRE++R+FA+++K+ HP H+ E  AA  G+ A++APLTF  I  + VQ
Sbjct  9    GMIWRYPDYFVVGREQLRQFALSIKNRHPAHFEEDAAAELGHDAIIAPLTFGTIFAKLVQ  68

Query  72   LEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIRSEVT  131
            L+ F   +I +    +   DQ+F F +PI A DKL+    + SV E  G  +   ++  T
Sbjct  69   LDFFRHVDIGMETLVIVQVDQRFVFSKPIKAGDKLWARMDIVSVDERFGADIVVTKNICT  128

Query  132  DAEGKPVVTSVVTMLGEAAHHEAD  155
            D   + V+ +  T++G+ A + A+
Sbjct  129  DENDEVVLEAYTTLMGQYADNSAN  152


>gi|111018980|ref|YP_701952.1| hypothetical protein RHA1_ro01984 [Rhodococcus jostii RHA1]
 gi|110818510|gb|ABG93794.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=187

 Score =  106 bits (265),  Expect = 9e-22, Method: Compositional matrix adjust.
 Identities = 52/140 (38%), Positives = 82/140 (59%), Gaps = 0/140 (0%)

Query  7    AQTLIGKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIA  66
            A  ++G HYR  D + VGREK+RE+A AV+D HP H+ E  A   GY  L+APLTF+++ 
Sbjct  24   ALAMVGHHYRVDDFYEVGREKVREYARAVQDWHPAHHDEEAAKGLGYDGLLAPLTFISLV  83

Query  67   GRRVQLEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEI  126
            G   Q  +F +     + +++   DQ+  FH+PI   D+L  D YL+S  +  G+ +   
Sbjct  84   GIIAQGRLFKEIVTGYDPSQILQTDQRLEFHKPIKVGDRLVCDVYLESFRQMGGSDIIVT  143

Query  127  RSEVTDAEGKPVVTSVVTML  146
            ++ VTD   + V T+  T++
Sbjct  144  KNIVTDQYDELVQTTWTTLV  163


>gi|336460571|gb|EGO39464.1| acyl dehydratase [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=167

 Score =  106 bits (265),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 53/137 (39%), Positives = 85/137 (63%), Gaps = 0/137 (0%)

Query  12   GKHYRAPDHFLVGREKIREFAVAVKDDHPTHYSEPDAAAAGYPALVAPLTFLAIAGRRVQ  71
            G  +R PD+F+VGRE++R+FA++VK+ HP H+SE  AA  G+ A++APLTF  I  + VQ
Sbjct  9    GMIWRYPDYFVVGREQLRQFALSVKNRHPAHFSEDAAAELGHDAIIAPLTFATIFAKLVQ  68

Query  72   LEIFTKFNIPINIARVFHRDQKFRFHRPILANDKLYFDTYLDSVIESHGTVLAEIRSEVT  131
            L+ F   +I +    +   DQ+F F +PI A DKL+    + SV E  G  +   ++  T
Sbjct  69   LDFFRHVDIGMETLVIVQVDQRFVFSKPIKAGDKLWARMDIVSVDERFGADIVVTKNICT  128

Query  132  DAEGKPVVTSVVTMLGE  148
            + +G+ V+ +  T+L +
Sbjct  129  NDDGELVLEAYTTLLSQ  145



Lambda     K      H
   0.321    0.135    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 128142534078




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40