BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0513 Length=182 Score E Sequences producing significant alignments: (Bits) Value gi|15607654|ref|NP_215027.1| transmembrane protein [Mycobacteriu... 362 2e-98 gi|167967420|ref|ZP_02549697.1| conserved transmembrane protein ... 360 5e-98 gi|240173364|ref|ZP_04752022.1| transmembrane protein [Mycobacte... 274 4e-72 gi|336460520|gb|EGO39415.1| hypothetical protein MAPs_40370 [Myc... 246 7e-64 gi|118619690|ref|YP_908022.1| transmembrane protein [Mycobacteri... 246 1e-63 gi|41410104|ref|NP_962940.1| hypothetical protein MAP4006 [Mycob... 246 1e-63 gi|183980871|ref|YP_001849162.1| transmembrane protein [Mycobact... 245 2e-63 gi|342858982|ref|ZP_08715636.1| hypothetical protein MCOL_08898 ... 244 4e-63 gi|296168172|ref|ZP_06850193.1| transmembrane protein [Mycobacte... 241 3e-62 gi|254821055|ref|ZP_05226056.1| hypothetical protein MintA_14057... 238 4e-61 gi|254777073|ref|ZP_05218589.1| hypothetical protein MaviaA2_207... 236 8e-61 gi|118463652|ref|YP_883765.1| hypothetical protein MAV_4636 [Myc... 213 7e-54 gi|108797662|ref|YP_637859.1| hypothetical protein Mmcs_0682 [My... 196 9e-49 gi|118470196|ref|YP_885362.1| transmembrane protein [Mycobacteri... 194 7e-48 gi|120401865|ref|YP_951694.1| putative transmembrane protein [My... 192 1e-47 gi|145220668|ref|YP_001131346.1| hypothetical protein Mflv_0062 ... 186 1e-45 gi|315442382|ref|YP_004075261.1| hypothetical protein Mspyr1_072... 186 1e-45 gi|333989150|ref|YP_004521764.1| transmembrane protein [Mycobact... 185 2e-45 gi|84993816|gb|ABC68328.1| OrfA [Mycobacterium fortuitum] 144 4e-33 gi|54027138|ref|YP_121380.1| hypothetical protein nfa51640 [Noca... 140 7e-32 gi|169631066|ref|YP_001704715.1| hypothetical protein MAB_3987c ... 137 9e-31 gi|111019041|ref|YP_702013.1| hypothetical protein RHA1_ro02048 ... 132 3e-29 gi|226361134|ref|YP_002778912.1| hypothetical protein ROP_17200 ... 127 5e-28 gi|343925968|ref|ZP_08765483.1| hypothetical protein GOALK_050_0... 125 3e-27 gi|229490540|ref|ZP_04384378.1| conserved hypothetical protein [... 125 3e-27 gi|326383040|ref|ZP_08204729.1| hypothetical protein SCNU_08886 ... 125 4e-27 gi|226305137|ref|YP_002765095.1| hypothetical protein RER_16480 ... 123 1e-26 gi|325674102|ref|ZP_08153792.1| transmembrane protein [Rhodococc... 114 5e-24 gi|312141087|ref|YP_004008423.1| integral membrane protein [Rhod... 114 6e-24 gi|333918320|ref|YP_004491901.1| hypothetical protein AS9A_0647 ... 109 2e-22 gi|262201016|ref|YP_003272224.1| hypothetical protein Gbro_1020 ... 106 2e-21 gi|296138405|ref|YP_003645648.1| hypothetical protein Tpau_0672 ... 85.1 4e-15 gi|467077|gb|AAA17261.1| B2168_C1_182 [Mycobacterium leprae] 54.7 6e-06 gi|300782419|ref|YP_003762710.1| hypothetical protein AMED_0487 ... 48.9 3e-04 gi|302523843|ref|ZP_07276185.1| predicted protein [Streptomyces ... 40.8 0.092 gi|256380704|ref|YP_003104364.1| hypothetical protein Amir_6721 ... 40.4 0.11 gi|257054367|ref|YP_003132199.1| hypothetical protein Svir_02900... 39.3 0.27 gi|291004416|ref|ZP_06562389.1| hypothetical protein SeryN2_0784... 38.9 0.35 gi|319949909|ref|ZP_08023910.1| hypothetical protein ES5_10427 [... 38.9 0.35 gi|134103365|ref|YP_001109026.1| hypothetical protein SACE_6938 ... 38.5 0.37 gi|255716494|ref|XP_002554528.1| KLTH0F07480p [Lachancea thermot... 37.4 1.0 gi|302818417|ref|XP_002990882.1| hypothetical protein SELMODRAFT... 36.2 1.9 gi|302785077|ref|XP_002974310.1| hypothetical protein SELMODRAFT... 36.2 1.9 >gi|15607654|ref|NP_215027.1| transmembrane protein [Mycobacterium tuberculosis H37Rv] gi|15839906|ref|NP_334943.1| hypothetical protein MT0534 [Mycobacterium tuberculosis CDC1551] gi|31791695|ref|NP_854188.1| transmembrane protein [Mycobacterium bovis AF2122/97] 79 more sequence titles Length=182 Score = 362 bits (928), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 182/182 (100%), Positives = 182/182 (100%), Gaps = 0/182 (0%) Query 1 MTPTGDTKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFV 60 MTPTGDTKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFV Sbjct 1 MTPTGDTKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFV 60 Query 61 ALQVKAARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGE 120 ALQVKAARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGE Sbjct 61 ALQVKAARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGE 120 Query 121 LVGVPRGRVGIGLKLTGGRTAQAWARRHQQLRAALTPLVQERLGPVDSDVADVNGDDAGP 180 LVGVPRGRVGIGLKLTGGRTAQAWARRHQQLRAALTPLVQERLGPVDSDVADVNGDDAGP Sbjct 121 LVGVPRGRVGIGLKLTGGRTAQAWARRHQQLRAALTPLVQERLGPVDSDVADVNGDDAGP 180 Query 181 AR 182 AR Sbjct 181 AR 182 >gi|167967420|ref|ZP_02549697.1| conserved transmembrane protein [Mycobacterium tuberculosis H37Ra] Length=182 Score = 360 bits (924), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 181/182 (99%), Positives = 181/182 (99%), Gaps = 0/182 (0%) Query 1 MTPTGDTKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFV 60 MTPTGDTKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFV Sbjct 1 MTPTGDTKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFV 60 Query 61 ALQVKAARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGE 120 ALQVK ARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGE Sbjct 61 ALQVKXARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGE 120 Query 121 LVGVPRGRVGIGLKLTGGRTAQAWARRHQQLRAALTPLVQERLGPVDSDVADVNGDDAGP 180 LVGVPRGRVGIGLKLTGGRTAQAWARRHQQLRAALTPLVQERLGPVDSDVADVNGDDAGP Sbjct 121 LVGVPRGRVGIGLKLTGGRTAQAWARRHQQLRAALTPLVQERLGPVDSDVADVNGDDAGP 180 Query 181 AR 182 AR Sbjct 181 AR 182 >gi|240173364|ref|ZP_04752022.1| transmembrane protein [Mycobacterium kansasii ATCC 12478] Length=179 Score = 274 bits (700), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 138/182 (76%), Positives = 155/182 (86%), Gaps = 3/182 (1%) Query 1 MTPTGDTKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFV 60 MT +GDTK K LFYEPGASWYW+L GP+AAVS++L+E+S G GVGL+TPAIFLVMVS FV Sbjct 1 MTSSGDTKSKPLFYEPGASWYWLLAGPIAAVSMILIEMSGGGGVGLVTPAIFLVMVSVFV 60 Query 61 ALQVKAARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGE 120 A+QVKAARIHTSVELT DALRQGTETI ++EIVK++PE + E SG+ AKWQSAR LGE Sbjct 61 AVQVKAARIHTSVELTEDALRQGTETILVSEIVKVFPEPENSEASGKPLAKWQSARALGE 120 Query 121 LVGVPRGRVGIGLKLTGGRTAQAWARRHQQLRAALTPLVQERLGPVDSDVADVNGDDAGP 180 LVGVPRGRVGIGLKLTGGRTAQAWARRH+ LRAALTPLV ER+ PV DV D DD G Sbjct 121 LVGVPRGRVGIGLKLTGGRTAQAWARRHRHLRAALTPLVTERVEPVQMDVDD---DDTGS 177 Query 181 AR 182 AR Sbjct 178 AR 179 >gi|336460520|gb|EGO39415.1| hypothetical protein MAPs_40370 [Mycobacterium avium subsp. paratuberculosis S397] Length=186 Score = 246 bits (629), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 120/160 (75%), Positives = 138/160 (87%), Gaps = 0/160 (0%) Query 6 DTKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVK 65 D +PK LFYEPGASW+WV GP +A +++L+EI SGA V L+ PAIFLV+VSAFV LQVK Sbjct 9 DVQPKRLFYEPGASWWWVACGPASAAAMVLIEIWSGAKVSLVVPAIFLVLVSAFVGLQVK 68 Query 66 AARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVGVP 125 AARIH SVELT +ALRQGTETI + EIVK+YPEA+ E SG+E A+WQSAR LGELVGVP Sbjct 69 AARIHVSVELTEEALRQGTETILVREIVKVYPEAENNEASGKELARWQSARALGELVGVP 128 Query 126 RGRVGIGLKLTGGRTAQAWARRHQQLRAALTPLVQERLGP 165 RGR+GIGLKLT GRTAQAWARRH+QLRAALTPLVQER+ P Sbjct 129 RGRIGIGLKLTNGRTAQAWARRHRQLRAALTPLVQERVEP 168 >gi|118619690|ref|YP_908022.1| transmembrane protein [Mycobacterium ulcerans Agy99] gi|118571800|gb|ABL06551.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99] Length=178 Score = 246 bits (628), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 126/183 (69%), Positives = 149/183 (82%), Gaps = 8/183 (4%) Query 1 MTPTGDTKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFV 60 MT G+ PK LFYE GASWYW+L GP +A+S++L+E S+GAG+ LITP IFLV+VS FV Sbjct 1 MTSAGE--PKTLFYESGASWYWLLAGPFSALSLILIEKSTGAGIQLITPVIFLVLVSVFV 58 Query 61 ALQVKAARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGE 120 +QVKAARIHTSVELT ++LRQGTETI ++EIV+++PE + SG+ AKWQSAR LGE Sbjct 59 GIQVKAARIHTSVELTEESLRQGTETILVSEIVRVFPEPENSVASGKSLAKWQSARALGE 118 Query 121 LVGVPRGRVGIGLKLTGGRTAQAWARRHQQLRAALTPLVQERLGP--VDSDVADVNGDDA 178 LVGVPRGRVGIG+KLTGGRTAQAWARRH+ LRAALTPLVQER+GP VD D GDDA Sbjct 119 LVGVPRGRVGIGIKLTGGRTAQAWARRHRHLRAALTPLVQERVGPTQVDRDA----GDDA 174 Query 179 GPA 181 A Sbjct 175 ETA 177 >gi|41410104|ref|NP_962940.1| hypothetical protein MAP4006 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398937|gb|AAS06556.1| hypothetical protein MAP_4006 [Mycobacterium avium subsp. paratuberculosis K-10] Length=198 Score = 246 bits (628), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 120/160 (75%), Positives = 138/160 (87%), Gaps = 0/160 (0%) Query 6 DTKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVK 65 D +PK LFYEPGASW+WV GP +A +++L+EI SGA V L+ PAIFLV+VSAFV LQVK Sbjct 21 DVQPKRLFYEPGASWWWVACGPASAAAMVLIEIWSGAKVSLVVPAIFLVLVSAFVGLQVK 80 Query 66 AARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVGVP 125 AARIH SVELT +ALRQGTETI + EIVK+YPEA+ E SG+E A+WQSAR LGELVGVP Sbjct 81 AARIHVSVELTEEALRQGTETILVREIVKVYPEAENNEASGKELARWQSARALGELVGVP 140 Query 126 RGRVGIGLKLTGGRTAQAWARRHQQLRAALTPLVQERLGP 165 RGR+GIGLKLT GRTAQAWARRH+QLRAALTPLVQER+ P Sbjct 141 RGRIGIGLKLTNGRTAQAWARRHRQLRAALTPLVQERVEP 180 >gi|183980871|ref|YP_001849162.1| transmembrane protein [Mycobacterium marinum M] gi|183174197|gb|ACC39307.1| conserved transmembrane protein [Mycobacterium marinum M] Length=178 Score = 245 bits (626), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 122/174 (71%), Positives = 145/174 (84%), Gaps = 4/174 (2%) Query 1 MTPTGDTKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFV 60 MT G+ PK LFYE GASWYW+L GP +A+S++L+E S+GAG+ LITP IFLV+VS FV Sbjct 1 MTSAGE--PKTLFYESGASWYWLLAGPFSALSLILIEKSTGAGIQLITPVIFLVLVSVFV 58 Query 61 ALQVKAARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGE 120 +QVKAARIHTSVELT ++LRQGTETI ++EIV+++PE + SG+ AKWQSAR LGE Sbjct 59 GIQVKAARIHTSVELTEESLRQGTETILVSEIVRVFPEPENSVASGKSLAKWQSARALGE 118 Query 121 LVGVPRGRVGIGLKLTGGRTAQAWARRHQQLRAALTPLVQERLGP--VDSDVAD 172 LVGVPRGRVGIG+KLTGGRTAQAWARRH+ LRAALTPLVQER+GP VD D D Sbjct 119 LVGVPRGRVGIGIKLTGGRTAQAWARRHRHLRAALTPLVQERVGPTQVDRDAGD 172 >gi|342858982|ref|ZP_08715636.1| hypothetical protein MCOL_08898 [Mycobacterium colombiense CECT 3035] gi|342133223|gb|EGT86426.1| hypothetical protein MCOL_08898 [Mycobacterium colombiense CECT 3035] Length=196 Score = 244 bits (623), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 120/164 (74%), Positives = 141/164 (86%), Gaps = 0/164 (0%) Query 5 GDTKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQV 64 GDT+PK LFYEPGASW+W+ GP AAV+++L+EI SGA V L+ PAIFLV+VSAF+ +QV Sbjct 20 GDTEPKRLFYEPGASWWWLACGPAAAVAMVLIEIWSGAPVSLVVPAIFLVLVSAFLGIQV 79 Query 65 KAARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVGV 124 KAARIH +VELT DALRQGTETI + EIVK+YPE + E SG++ A+WQS+R LGELVGV Sbjct 80 KAARIHVAVELTEDALRQGTETILVREIVKVYPEPENNEASGKDLARWQSSRALGELVGV 139 Query 125 PRGRVGIGLKLTGGRTAQAWARRHQQLRAALTPLVQERLGPVDS 168 PRGRVGIGLKLTG RTAQAWARRH+QLRAALTPLVQER+ P S Sbjct 140 PRGRVGIGLKLTGDRTAQAWARRHRQLRAALTPLVQERVEPTRS 183 >gi|296168172|ref|ZP_06850193.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896850|gb|EFG76479.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=184 Score = 241 bits (616), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 127/181 (71%), Positives = 145/181 (81%), Gaps = 2/181 (1%) Query 1 MTPTGDTKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFV 60 MT KPK LFYEPGASW+W GP+AA S++L+EI SGA V + P IFLV+VS FV Sbjct 5 MTTARGAKPKPLFYEPGASWWWAAWGPVAAGSMILIEIWSGAPVSYLIPVIFLVLVSGFV 64 Query 61 ALQVKAARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGE 120 LQVKAARIH SVELT DALRQGTETI + EI+K+YPEA+ E SG+E A+WQSAR LGE Sbjct 65 GLQVKAARIHVSVELTEDALRQGTETILVREILKVYPEAEHHEASGKELAQWQSARALGE 124 Query 121 LVGVPRGRVGIGLKLTGGRTAQAWARRHQQLRAALTPLVQERLGPVDSDVADVNGDDAGP 180 LVGVPRGR+GIGLKLTG RTAQAWARRH++LRAALTPLVQER+ P SD AD + DD G Sbjct 125 LVGVPRGRIGIGLKLTGNRTAQAWARRHRELRAALTPLVQERVEPAGSD-ADRD-DDTGS 182 Query 181 A 181 A Sbjct 183 A 183 >gi|254821055|ref|ZP_05226056.1| hypothetical protein MintA_14057 [Mycobacterium intracellulare ATCC 13950] Length=176 Score = 238 bits (606), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 115/159 (73%), Positives = 136/159 (86%), Gaps = 0/159 (0%) Query 12 LFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVKAARIHT 71 +FYEPGA+W+WV +GP +A +++L+EI SGA V L+ PAIF V+VSAFV LQVKAARIH Sbjct 1 MFYEPGATWWWVASGPASAAAMVLIEIWSGAKVSLVVPAIFFVLVSAFVGLQVKAARIHV 60 Query 72 SVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVGVPRGRVGI 131 SVELT DALRQGTETI + EIV++YPE + E SG+E A+WQSAR LGELVGVPRGR+GI Sbjct 61 SVELTEDALRQGTETILVREIVRVYPEPENHEASGKELARWQSARALGELVGVPRGRIGI 120 Query 132 GLKLTGGRTAQAWARRHQQLRAALTPLVQERLGPVDSDV 170 GLKLT GRTAQAWARRH+QLRAALTPLVQER+ P +DV Sbjct 121 GLKLTNGRTAQAWARRHRQLRAALTPLVQERVEPTGTDV 159 >gi|254777073|ref|ZP_05218589.1| hypothetical protein MaviaA2_20739 [Mycobacterium avium subsp. avium ATCC 25291] Length=172 Score = 236 bits (603), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 116/154 (76%), Positives = 133/154 (87%), Gaps = 0/154 (0%) Query 12 LFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVKAARIHT 71 +FYEPGASW WV GP +A +++L+EI SGA V L+ PAIFLV+VSAFV LQVKAARIH Sbjct 1 MFYEPGASWGWVACGPASAAAMVLIEIWSGAKVSLVVPAIFLVLVSAFVGLQVKAARIHV 60 Query 72 SVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVGVPRGRVGI 131 SVELT +ALRQGTETI + EIVK+YPEA+ E SG+E A+WQSAR LGELVGVPRGR+GI Sbjct 61 SVELTEEALRQGTETILVREIVKVYPEAENNEASGKELARWQSARALGELVGVPRGRIGI 120 Query 132 GLKLTGGRTAQAWARRHQQLRAALTPLVQERLGP 165 GLKLT GRTAQAWARRH+QLRAALTPLVQER+ P Sbjct 121 GLKLTNGRTAQAWARRHRQLRAALTPLVQERVEP 154 >gi|118463652|ref|YP_883765.1| hypothetical protein MAV_4636 [Mycobacterium avium 104] gi|118164939|gb|ABK65836.1| conserved hypothetical protein [Mycobacterium avium 104] Length=161 Score = 213 bits (543), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 106/141 (76%), Positives = 122/141 (87%), Gaps = 0/141 (0%) Query 25 TGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVKAARIHTSVELTHDALRQGT 84 GP +A +++L+EI SGA V L+ PAIFLV+VSAFV LQVKAARIH SVELT +ALRQGT Sbjct 3 CGPASAAAMVLIEIWSGAKVSLVVPAIFLVLVSAFVGLQVKAARIHVSVELTEEALRQGT 62 Query 85 ETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVGVPRGRVGIGLKLTGGRTAQAW 144 ETI + EIVK+YPEA+ E SG+E A+WQSAR LGELVGVPRGR+GIGLKLT GRTAQAW Sbjct 63 ETILVREIVKVYPEAENNEASGKELARWQSARALGELVGVPRGRIGIGLKLTNGRTAQAW 122 Query 145 ARRHQQLRAALTPLVQERLGP 165 ARRH+QLRAALTPLVQER+ P Sbjct 123 ARRHRQLRAALTPLVQERVEP 143 >gi|108797662|ref|YP_637859.1| hypothetical protein Mmcs_0682 [Mycobacterium sp. MCS] gi|119866749|ref|YP_936701.1| hypothetical protein Mkms_0695 [Mycobacterium sp. KMS] gi|126433286|ref|YP_001068977.1| hypothetical protein Mjls_0675 [Mycobacterium sp. JLS] gi|108768081|gb|ABG06803.1| putative conserved transmembrane protein [Mycobacterium sp. MCS] gi|119692838|gb|ABL89911.1| putative conserved transmembrane protein [Mycobacterium sp. KMS] gi|126233086|gb|ABN96486.1| putative conserved transmembrane protein [Mycobacterium sp. JLS] Length=160 Score = 196 bits (499), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 100/162 (62%), Positives = 121/162 (75%), Gaps = 5/162 (3%) Query 2 TPTGDTKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVA 61 P+GD + LFYEPGASW W+L GP A ++L ++IS+G G+ + P +FLV+VS F+A Sbjct 3 NPSGDPSTERLFYEPGASWAWLLAGPAAGGAMLAIQISAGYGLQPLVPGLFLVLVSGFLA 62 Query 62 LQVKAARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGEL 121 +QVKAARIHTSVELT + LRQG E +L+EIV +YP A G E KWQSAR LGEL Sbjct 63 VQVKAARIHTSVELTPETLRQGAEITKLSEIVAVYPPATGSEMQ-----KWQSARALGEL 117 Query 122 VGVPRGRVGIGLKLTGGRTAQAWARRHQQLRAALTPLVQERL 163 GVPRGR GIGLKL+G RTAQAWARRH LRA LT LV+ER+ Sbjct 118 TGVPRGRTGIGLKLSGSRTAQAWARRHATLRAELTRLVEERV 159 >gi|118470196|ref|YP_885362.1| transmembrane protein [Mycobacterium smegmatis str. MC2 155] gi|118171483|gb|ABK72379.1| putative conserved transmembrane protein [Mycobacterium smegmatis str. MC2 155] Length=164 Score = 194 bits (492), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 100/153 (66%), Positives = 117/153 (77%), Gaps = 5/153 (3%) Query 10 KLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVKAARI 69 ++LFYE GASW W+L+GP+A V + +L+ + G G L P IFLV+VS F+A+Q+KAARI Sbjct 15 EVLFYEQGASWAWLLSGPIAGVGMAILQRTGGYGYDLWIPLIFLVLVSGFIAIQIKAARI 74 Query 70 HTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVGVPRGRV 129 HTSVELT + LRQGTE I + EIV IYPEA SG E KWQSAR LGEL GVPRGR Sbjct 75 HTSVELTRETLRQGTEIISIDEIVDIYPEA-----SGSEVPKWQSARALGELTGVPRGRT 129 Query 130 GIGLKLTGGRTAQAWARRHQQLRAALTPLVQER 162 GIGLKLTG R AQAWARRH+ LRAAL LV+ER Sbjct 130 GIGLKLTGKRVAQAWARRHRTLRAALQQLVEER 162 >gi|120401865|ref|YP_951694.1| putative transmembrane protein [Mycobacterium vanbaalenii PYR-1] gi|119954683|gb|ABM11688.1| putative conserved transmembrane protein [Mycobacterium vanbaalenii PYR-1] Length=169 Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 100/164 (61%), Positives = 124/164 (76%), Gaps = 5/164 (3%) Query 2 TPTGDTKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVA 61 T DT+P+LLFYE GASW WVL GP A ++ ++++S+G G+ + P +F V+VS F+A Sbjct 7 TQPADTQPELLFYEQGASWLWVLAGPAAGAAMAMIQLSAGYGIQWVVPGLFFVLVSGFLA 66 Query 62 LQVKAARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGEL 121 +QVKAARIHTSVELT + LRQGTE EIV++YPEA G ET KWQ AR LGEL Sbjct 67 IQVKAARIHTSVELTTEKLRQGTEVTLTDEIVRVYPEATGSETP-----KWQYARALGEL 121 Query 122 VGVPRGRVGIGLKLTGGRTAQAWARRHQQLRAALTPLVQERLGP 165 GVPRGR GIGL+LT RTAQAWAR+H+QLRAALT L++ER+ P Sbjct 122 TGVPRGRTGIGLRLTNDRTAQAWARKHRQLRAALTNLIEERIPP 165 >gi|145220668|ref|YP_001131346.1| hypothetical protein Mflv_0062 [Mycobacterium gilvum PYR-GCK] gi|145213154|gb|ABP42558.1| putative conserved transmembrane protein [Mycobacterium gilvum PYR-GCK] Length=162 Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 103/162 (64%), Positives = 123/162 (76%), Gaps = 5/162 (3%) Query 4 TGDTKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQ 63 TG P++LF E GASW WVL GP A V++ L++ S G G+ + P +FLV+VS F+A+Q Sbjct 2 TGPRSPEVLFSEQGASWLWVLAGPAAGVAMALIQYSGGYGIQWVVPVLFLVLVSGFLAIQ 61 Query 64 VKAARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVG 123 VKAARIHTSVELT ++LRQGTE IR EIV+IYPEA G ET KWQ AR LGEL G Sbjct 62 VKAARIHTSVELTTESLRQGTELIRTEEIVRIYPEASGSETP-----KWQYARALGELTG 116 Query 124 VPRGRVGIGLKLTGGRTAQAWARRHQQLRAALTPLVQERLGP 165 VPRGR GIG++LT RTAQAWAR+H QLRAALT LV+ER+ P Sbjct 117 VPRGRTGIGVRLTNDRTAQAWARKHHQLRAALTNLVEERIPP 158 >gi|315442382|ref|YP_004075261.1| hypothetical protein Mspyr1_07260 [Mycobacterium sp. Spyr1] gi|315260685|gb|ADT97426.1| hypothetical protein Mspyr1_07260 [Mycobacterium sp. Spyr1] Length=162 Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 103/162 (64%), Positives = 123/162 (76%), Gaps = 5/162 (3%) Query 4 TGDTKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQ 63 TG P++LF E GASW WVL GP A V++ L++ S G G+ + P +FLV+VS F+A+Q Sbjct 2 TGPRAPEVLFSEQGASWLWVLAGPAAGVAMALIQYSGGYGIQWVVPVLFLVLVSGFLAIQ 61 Query 64 VKAARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVG 123 VKAARIHTSVELT ++LRQGTE IR EIV+IYPEA G ET KWQ AR LGEL G Sbjct 62 VKAARIHTSVELTTESLRQGTELIRTEEIVRIYPEASGSETP-----KWQYARALGELTG 116 Query 124 VPRGRVGIGLKLTGGRTAQAWARRHQQLRAALTPLVQERLGP 165 VPRGR GIG++LT RTAQAWAR+H QLRAALT LV+ER+ P Sbjct 117 VPRGRTGIGVRLTNDRTAQAWARKHHQLRAALTNLVEERIPP 158 >gi|333989150|ref|YP_004521764.1| transmembrane protein [Mycobacterium sp. JDM601] gi|333485118|gb|AEF34510.1| transmembrane protein [Mycobacterium sp. JDM601] Length=184 Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 101/175 (58%), Positives = 125/175 (72%), Gaps = 3/175 (1%) Query 3 PTGDTKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVAL 62 PT + P LF+E GASWYWVL GP+A +LL++ S G + PAI + +VS +A+ Sbjct 6 PTAPSAP--LFFECGASWYWVLFGPVAGGLLLLIQNSGGGEFQPVIPAIMMGLVSGMLAI 63 Query 63 QVKAARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGE-EPAKWQSARTLGEL 121 QVKAARIHTSVELT D LRQGTET+R+AEIV IYPEA G+ +P KWQ +R LGEL Sbjct 64 QVKAARIHTSVELTRDTLRQGTETLRIAEIVMIYPEAKRPTGWGKAQPEKWQESRALGEL 123 Query 122 VGVPRGRVGIGLKLTGGRTAQAWARRHQQLRAALTPLVQERLGPVDSDVADVNGD 176 GVPR RVGIGL+L+G RT QAWAR H++LRAALT L+ E + P + DV+ D Sbjct 124 SGVPRRRVGIGLRLSGRRTVQAWARDHRRLRAALTELLPEAIPPGELTRPDVDDD 178 >gi|84993816|gb|ABC68328.1| OrfA [Mycobacterium fortuitum] Length=124 Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 86/127 (68%), Positives = 99/127 (78%), Gaps = 5/127 (3%) Query 36 LEISSGAGVGLITPAIFLVMVSAFVALQVKAARIHTSVELTHDALRQGTETIRLAEIVKI 95 L+ + G G L P +FLV+VS FVA+Q+KAARIHTSVELT + LRQG ETI++ EIV I Sbjct 1 LQKTGGYGHDLWIPIVFLVLVSVFVAIQIKAARIHTSVELTAETLRQGAETIQVDEIVSI 60 Query 96 YPEADGRETSGEEPAKWQSARTLGELVGVPRGRVGIGLKLTGGRTAQAWARRHQQLRAAL 155 YPEA SG E KWQSAR LGEL GVPRGR GIGLKLTG RTAQAWAR+H++LR L Sbjct 61 YPEA-----SGSEVPKWQSARALGELSGVPRGRTGIGLKLTGARTAQAWARKHRRLREVL 115 Query 156 TPLVQER 162 TPLV+ER Sbjct 116 TPLVEER 122 >gi|54027138|ref|YP_121380.1| hypothetical protein nfa51640 [Nocardia farcinica IFM 10152] gi|54018646|dbj|BAD60016.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=181 Score = 140 bits (353), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 82/157 (53%), Positives = 100/157 (64%), Gaps = 3/157 (1%) Query 11 LLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVKAARIH 70 +LF EPGA W V GP+ + +L+LE+ +G V V+V+AFVALQV AAR H Sbjct 9 VLFTEPGARWRAVAYGPVLCLVILVLELVTGGPVHWFALVFCAVLVAAFVALQVYAARTH 68 Query 71 TSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVGVPRGRVG 130 SVELT ALRQGTET+ +A I ++ PE D EE W+SAR LGEL GVPR R G Sbjct 69 VSVELTPSALRQGTETLPVAAIDEVLPERDEDSWDDEE---WESARALGELTGVPRRRKG 125 Query 131 IGLKLTGGRTAQAWARRHQQLRAALTPLVQERLGPVD 167 IGL+L G QAWAR H+ LRAALT + E+ G D Sbjct 126 IGLRLREGGMVQAWARDHRGLRAALTGALAEQAGSAD 162 >gi|169631066|ref|YP_001704715.1| hypothetical protein MAB_3987c [Mycobacterium abscessus ATCC 19977] gi|169243033|emb|CAM64061.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=172 Score = 137 bits (344), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 72/154 (47%), Positives = 101/154 (66%), Gaps = 9/154 (5%) Query 6 DTKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVK 65 + +P+L FYEPG W W+L GPLA + + L++ GV + P I V+V+ FV+LQ+ Sbjct 6 EAEPRL-FYEPGGRWLWLLLGPLAGLIMFGLQVWGRGGVSPVMPLIAAVLVAFFVSLQIY 64 Query 66 AARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVGVP 125 A R+H SVELT LRQG E + +++I +Y + D W+ +R LGEL GVP Sbjct 65 AVRVHASVELTPTELRQGGEILAVSQIRWLYSDDDRH--------IWEESRPLGELTGVP 116 Query 126 RGRVGIGLKLTGGRTAQAWARRHQQLRAALTPLV 159 +GR +GL+LTGGR AQAWA++H++LRAAL LV Sbjct 117 KGRKPVGLRLTGGRRAQAWAKKHEELRAALATLV 150 >gi|111019041|ref|YP_702013.1| hypothetical protein RHA1_ro02048 [Rhodococcus jostii RHA1] gi|110818571|gb|ABG93855.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=160 Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 74/158 (47%), Positives = 103/158 (66%), Gaps = 3/158 (1%) Query 7 TKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVKA 66 ++P +LF EPGA W V GP+ + L++E+ +G V ++F V++S FV +QV A Sbjct 2 SEPAVLFSEPGARWRMVAFGPVFCLIALIIELLTGPVVHWFALSLFAVLLSGFVYVQVVA 61 Query 67 ARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVGVPR 126 AR H SVELT +LRQGTE + + EI+KI P AD E+ ++P W++AR+LGEL VPR Sbjct 62 ARRHASVELTTSSLRQGTEDLPITEILKIMPPADP-ESYEQQP--WETARSLGELSAVPR 118 Query 127 GRVGIGLKLTGGRTAQAWARRHQQLRAALTPLVQERLG 164 R GIGL+L GG QAWA+ + LRA L L+ + G Sbjct 119 RRTGIGLRLRGGALVQAWAKDDEALRAQLESLLAKSAG 156 >gi|226361134|ref|YP_002778912.1| hypothetical protein ROP_17200 [Rhodococcus opacus B4] gi|226239619|dbj|BAH49967.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=166 Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 74/158 (47%), Positives = 101/158 (64%), Gaps = 3/158 (1%) Query 7 TKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVKA 66 ++ +LF EPGA W V GP+ + L++E+ +G V ++F V++S FV +QV A Sbjct 8 SETAVLFSEPGARWRMVAFGPVFCLIALIIELLTGPVVHWFALSLFAVLLSGFVYVQVVA 67 Query 67 ARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVGVPR 126 AR H SVELT +LRQGTE + + EIVKI P AD E+ ++P W++AR+LGEL VPR Sbjct 68 ARRHASVELTTSSLRQGTEDLPITEIVKIMPPADP-ESYEQQP--WETARSLGELSAVPR 124 Query 127 GRVGIGLKLTGGRTAQAWARRHQQLRAALTPLVQERLG 164 R GIGL+L GG QAWA+ LRA L L+ + G Sbjct 125 RRKGIGLRLRGGALVQAWAKDDVALRAQLESLLAKSAG 162 >gi|343925968|ref|ZP_08765483.1| hypothetical protein GOALK_050_02640 [Gordonia alkanivorans NBRC 16433] gi|343764319|dbj|GAA12409.1| hypothetical protein GOALK_050_02640 [Gordonia alkanivorans NBRC 16433] Length=213 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 73/147 (50%), Positives = 93/147 (64%), Gaps = 5/147 (3%) Query 10 KLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVKAARI 69 ++LFYEPG S + VL GP+ ++VL++EI+ V IFLV++ F +QV AAR Sbjct 30 EVLFYEPGGSRWVVLIGPVLVLAVLIMEIAGPGQVHWPVLIIFLVILFGFSLVQVTAARR 89 Query 70 HTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVGVPRGRV 129 H SVELT LRQG T LA+I KIYP A+ T P W+SA LGEL GVPR R Sbjct 90 HVSVELTETTLRQGAVTTPLADIEKIYP-ANNSPT----PEDWESAPALGELHGVPRRRK 144 Query 130 GIGLKLTGGRTAQAWARRHQQLRAALT 156 G+G++LT G AQAWAR + R+ LT Sbjct 145 GVGVRLTSGNLAQAWARDVEVFRSELT 171 >gi|229490540|ref|ZP_04384378.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229322360|gb|EEN88143.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=171 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 69/152 (46%), Positives = 98/152 (65%), Gaps = 3/152 (1%) Query 9 PKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVKAAR 68 P +L+YEPG+ W+ + GP+ + L++E+ +G V A+F V+++ V +QV AAR Sbjct 10 PDVLYYEPGSRWWAIAFGPIFCLIALVIELFTGPVVHWFGLAMFAVILTGLVYVQVIAAR 69 Query 69 IHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGE-EPAKWQSARTLGELVGVPRG 127 H SV LT LRQGTE + + EI +++PE+D E EP W++AR LGEL GVPR Sbjct 70 RHASVLLTATTLRQGTEEVPITEIAEVFPESDDAAYEDEMEP--WETARALGELSGVPRR 127 Query 128 RVGIGLKLTGGRTAQAWARRHQQLRAALTPLV 159 R GIGL+LT G +AWA+ Q LR AL+ +V Sbjct 128 RHGIGLRLTTGGLVRAWAKDDQALREALSQVV 159 >gi|326383040|ref|ZP_08204729.1| hypothetical protein SCNU_08886 [Gordonia neofelifaecis NRRL B-59395] gi|326198176|gb|EGD55361.1| hypothetical protein SCNU_08886 [Gordonia neofelifaecis NRRL B-59395] Length=213 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 71/145 (49%), Positives = 88/145 (61%), Gaps = 5/145 (3%) Query 12 LFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVKAARIHT 71 L YEPG SW+ V GP+ ++ L++EI + IF V++ F LQV AAR H Sbjct 58 LLYEPGGSWWVVAIGPVLIIATLIMEILGKGRIHWEVLTIFGVVLIGFSLLQVIAARQHV 117 Query 72 SVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVGVPRGRVGI 131 S+ LT LR+GTETI +A+IVKI+PE G ET W+SA LGEL VPR R GI Sbjct 118 SMRLTETTLREGTETIEIADIVKIFPENTGPETQ-----DWESAPALGELHAVPRRRKGI 172 Query 132 GLKLTGGRTAQAWARRHQQLRAALT 156 GL+L GR QAWAR +LR LT Sbjct 173 GLRLANGRLVQAWARDVGRLRIELT 197 >gi|226305137|ref|YP_002765095.1| hypothetical protein RER_16480 [Rhodococcus erythropolis PR4] gi|226184252|dbj|BAH32356.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=171 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 68/152 (45%), Positives = 98/152 (65%), Gaps = 3/152 (1%) Query 9 PKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVKAAR 68 P +L+YEPG+ W+ + GP+ + L++E+ +G V A+F V+++ V +QV AAR Sbjct 10 PDVLYYEPGSRWWTIAFGPIFCLIALVIELFTGPVVHWFGLAMFAVVLTGLVYVQVIAAR 69 Query 69 IHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGE-EPAKWQSARTLGELVGVPRG 127 H SV LT LRQGTE + + EI +++PE+D E EP W++AR LGEL GVPR Sbjct 70 RHASVLLTATTLRQGTEEVPITEIAEVFPESDDAAYEDEMEP--WETARALGELSGVPRR 127 Query 128 RVGIGLKLTGGRTAQAWARRHQQLRAALTPLV 159 R GIGL+LT G +AWA+ + LR AL+ +V Sbjct 128 RHGIGLRLTTGGLVRAWAKDDRALREALSQVV 159 >gi|325674102|ref|ZP_08153792.1| transmembrane protein [Rhodococcus equi ATCC 33707] gi|325555367|gb|EGD25039.1| transmembrane protein [Rhodococcus equi ATCC 33707] Length=163 Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 64/138 (47%), Positives = 84/138 (61%), Gaps = 3/138 (2%) Query 12 LFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVKAARIHT 71 LF E GA W V GP+ V L++E+++G V +F +++ V++QV AAR H Sbjct 11 LFLEEGARWRTVAYGPVFCVIALVIELATGPVVHWFALTLFAAILAGIVSVQVAAARRHV 70 Query 72 SVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVGVPRGRVGI 131 SV LT LRQG E + L EI ++ PEAD +EP W+SAR+LGEL VPR R GI Sbjct 71 SVLLTDSLLRQGAEEVSLDEIDEVLPEAD---PYADEPQPWESARSLGELSAVPRRRTGI 127 Query 132 GLKLTGGRTAQAWARRHQ 149 GL+L G AQAWAR + Sbjct 128 GLRLRDGSLAQAWARDDE 145 >gi|312141087|ref|YP_004008423.1| integral membrane protein [Rhodococcus equi 103S] gi|311890426|emb|CBH49744.1| putative integral membrane protein [Rhodococcus equi 103S] Length=189 Score = 114 bits (285), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 64/138 (47%), Positives = 84/138 (61%), Gaps = 3/138 (2%) Query 12 LFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVKAARIHT 71 LF E GA W V GP+ V L++E+++G V +F +++ V++QV AAR H Sbjct 37 LFLEEGARWRTVAYGPVFCVIALVIELATGPVVHWFALTLFAAILAGIVSVQVAAARRHV 96 Query 72 SVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVGVPRGRVGI 131 SV LT LRQG E + L EI ++ PEAD +EP W+SAR+LGEL VPR R GI Sbjct 97 SVLLTDSLLRQGAEEVPLDEIDEVLPEAD---PYADEPQPWESARSLGELSAVPRRRTGI 153 Query 132 GLKLTGGRTAQAWARRHQ 149 GL+L G AQAWAR + Sbjct 154 GLRLRDGSLAQAWARDDE 171 >gi|333918320|ref|YP_004491901.1| hypothetical protein AS9A_0647 [Amycolicicoccus subflavus DQS3-9A1] gi|333480541|gb|AEF39101.1| hypothetical protein AS9A_0647 [Amycolicicoccus subflavus DQS3-9A1] Length=153 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/148 (46%), Positives = 85/148 (58%), Gaps = 5/148 (3%) Query 13 FYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVKAARIHTS 72 F+EPGA W +L GP+ ++ EI G V + + +++A V QV A R H Sbjct 7 FFEPGAQWRALLFGPVFCTVGIVSEIFLGGPVHWVGWLVAAALLTAVVGWQVYAGRTHLR 66 Query 73 VELTHDALRQGTETIRLAEIVKIYP-EADGRETSGEEPAKWQSARTLGELVGVPRGRVGI 131 VELT LRQG ET+ L EI ++ P E R +G+ WQ AR LGEL GVPR R G+ Sbjct 67 VELTPHYLRQGEETLALEEIAELLPPEGTDRWGAGD----WQMARALGELHGVPRRRTGV 122 Query 132 GLKLTGGRTAQAWARRHQQLRAALTPLV 159 GL+L G QAWAR H LRAAL L+ Sbjct 123 GLRLQSGSIVQAWARDHHTLRAALQRLL 150 >gi|262201016|ref|YP_003272224.1| hypothetical protein Gbro_1020 [Gordonia bronchialis DSM 43247] gi|262084363|gb|ACY20331.1| hypothetical protein Gbro_1020 [Gordonia bronchialis DSM 43247] Length=149 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 62/134 (47%), Positives = 79/134 (59%), Gaps = 5/134 (3%) Query 23 VLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVKAARIHTSVELTHDALRQ 82 V+ GPL ++VL+LE + V IFLV++ F +QV AAR H SVELT LRQ Sbjct 2 VMIGPLLVIAVLVLEATGPGSVHWPVLMIFLVVLLGFSVVQVTAARRHVSVELTETTLRQ 61 Query 83 GTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVGVPRGRVGIGLKLTGGRTAQ 142 G + IRL EI KI+P P W+SA LGEL GVPR R G+G++L+ G AQ Sbjct 62 GAKRIRLDEIEKIFP-----PNHDPTPQDWESAPALGELHGVPRRRKGVGVRLSSGALAQ 116 Query 143 AWARRHQQLRAALT 156 AWAR + R+ L Sbjct 117 AWARDVEAFRSELN 130 >gi|296138405|ref|YP_003645648.1| hypothetical protein Tpau_0672 [Tsukamurella paurometabola DSM 20162] gi|296026539|gb|ADG77309.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=155 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 55/143 (39%), Positives = 77/143 (54%), Gaps = 10/143 (6%) Query 12 LFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSA----FVALQVKAA 67 L+ E G S W+ P+ ++V+ ++ G +G + +++ FV LQV A Sbjct 4 LYSERGLSRVWLFIAPVLTIAVI---VTQGVVIGEWSDWWMWLLLGGLSQLFVWLQVTAG 60 Query 68 RIHTSVELTHDALRQGTETIRLAEIVKIYP---EADGRETSGEEPAKWQSARTLGELVGV 124 R H SV LT + LR G E+I + EI +I P ++ EE W SAR +G+L V Sbjct 61 RTHVSVALTPEELRCGEESIPVDEIAEILPGKMPDHPKKAKPEEFPSWSSARVMGKLQTV 120 Query 125 PRGRVGIGLKLTGGRTAQAWARR 147 PR R G+GLKLT G T QAWAR Sbjct 121 PRRRYGMGLKLTDGSTVQAWARN 143 >gi|467077|gb|AAA17261.1| B2168_C1_182 [Mycobacterium leprae] Length=103 Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 47/106 (45%), Positives = 61/106 (58%), Gaps = 5/106 (4%) Query 1 MTPTGDTKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFV 60 MT + K LFYE GA+W + + SGA + L+ IFLV+VS FV Sbjct 1 MTAKTEANRKPLFYESGANW---IGTSGSGGRDFHWHFGSGAPMQLVVLLIFLVLVSWFV 57 Query 61 ALQVKAARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSG 106 LQVK A+I +SVE T+ AL +G ETI +AEIVKI + RE +G Sbjct 58 GLQVKPAQIQSSVEPTYGALCRGVETILVAEIVKIL--SGNREFTG 101 >gi|300782419|ref|YP_003762710.1| hypothetical protein AMED_0487 [Amycolatopsis mediterranei U32] gi|299791933|gb|ADJ42308.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340523787|gb|AEK38992.1| hypothetical protein RAM_02500 [Amycolatopsis mediterranei S699] Length=148 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 49/152 (33%), Positives = 72/152 (48%), Gaps = 17/152 (11%) Query 12 LFYEPGASWYWVLTGPLAAVSVLLLEISSGA---GVGLITPAIFLVMVSAFVALQVKAAR 68 L+ E G SW + GPL A+ L E+++G GVG + L +++ V A R Sbjct 5 LYAESGVSWAAIGWGPLFALVGALAELATGGPVHGVGWLMVGFALAVITL---PWVYARR 61 Query 69 IHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVGVPRGR 128 S+E+T + LRQG E + A+I ++ T P AR LG VPR Sbjct 62 RFLSLEVTTEQLRQGREQVPAAQIAEV--------TDVGTPV---GARVLGGGWSVPRKY 110 Query 129 VGIGLKLTGGRTAQAWARRHQQLRAALTPLVQ 160 + +KL G AWA+ + L+ AL LV+ Sbjct 111 DSLPVKLADGTVVLAWAKDVEALQDALDRLVR 142 >gi|302523843|ref|ZP_07276185.1| predicted protein [Streptomyces sp. AA4] gi|302432738|gb|EFL04554.1| predicted protein [Streptomyces sp. AA4] Length=156 Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust. Identities = 43/149 (29%), Positives = 66/149 (45%), Gaps = 11/149 (7%) Query 10 KLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVKAARI 69 + L+ E G W ++ GPL A+ L E+++G ++ + + V A R Sbjct 4 RTLYSEAGVGWSALIWGPLFALLGALAELATGGPTHVVGWVLIGAALCGLTLPWVYARRR 63 Query 70 HTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVGVPRGRV 129 S+E+T + LRQG ET+ I + T P R LG VPR Sbjct 64 FLSLEVTTEGLRQGRETLAAERIASV--------TDVGAPV---GTRVLGGGWSVPRKYD 112 Query 130 GIGLKLTGGRTAQAWARRHQQLRAALTPL 158 + ++LT G AWAR + L++AL L Sbjct 113 ELPVELTDGTVVLAWARDVEALKSALAEL 141 >gi|256380704|ref|YP_003104364.1| hypothetical protein Amir_6721 [Actinosynnema mirum DSM 43827] gi|255925007|gb|ACU40518.1| hypothetical protein Amir_6721 [Actinosynnema mirum DSM 43827] Length=147 Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust. Identities = 45/149 (31%), Positives = 69/149 (47%), Gaps = 12/149 (8%) Query 12 LFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVKAARIHT 71 L+ E GA+W+ + GP A++ +E +G L + +V++ A+ V+ R Sbjct 6 LYSERGATWWPLAWGPAFALAGFAVEALTGGAHPLFWLVVAVVLLLP-TAVWVQGRRRVL 64 Query 72 SVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVGVPRGRVGI 131 V LT AL QG E + + +I E G EP AR LG +PRG + Sbjct 65 GVRLTPVALHQGREELPVRDIA---------EVRGVEPRA--GARVLGGGWTLPRGAEPV 113 Query 132 GLKLTGGRTAQAWARRHQQLRAALTPLVQ 160 ++L+ G A WAR L AL L++ Sbjct 114 PVRLSDGTVALGWARDRAALTEALDRLLR 142 >gi|257054367|ref|YP_003132199.1| hypothetical protein Svir_02900 [Saccharomonospora viridis DSM 43017] gi|256584239|gb|ACU95372.1| hypothetical protein Svir_02900 [Saccharomonospora viridis DSM 43017] Length=130 Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust. Identities = 42/137 (31%), Positives = 56/137 (41%), Gaps = 11/137 (8%) Query 26 GPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVKAARIHTSVELTHDALRQGTE 85 GPL A + E+ SG V V + A AL V A R S +T L QG E Sbjct 4 GPLFAFVGYVGELLSGGRVNTTLWLSVGVGLFALTALWVYARRRFLSTRVTDTELWQGGE 63 Query 86 TIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVGVPRGRVGIGLKLTGGRTAQAWA 145 + + I + E P AR LG + VPR + L+L AWA Sbjct 64 RLAVDRITAV--------DDVEAP---PGARVLGGGLSVPRKFAEVPLRLDDDTVVLAWA 112 Query 146 RRHQQLRAALTPLVQER 162 R LR AL ++++R Sbjct 113 RDGDALREALRSVLRDR 129 >gi|291004416|ref|ZP_06562389.1| hypothetical protein SeryN2_07842 [Saccharopolyspora erythraea NRRL 2338] Length=145 Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust. Identities = 48/155 (31%), Positives = 71/155 (46%), Gaps = 12/155 (7%) Query 7 TKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVKA 66 T+P +L+ E GASW+ VL GP A+ + +E+ + L+ + ++A + V Sbjct 2 TEP-VLYAERGASWWPVLWGPAFALVGVAVELLTPGPRHLVAWLLLAGALAAAATVWVYG 60 Query 67 ARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVGVPR 126 R SV LT L G E + E+ +I D G AR LG P+ Sbjct 61 RRKVCSVRLTPTNLAVGREVL---EVERIAAATDVGAPVG--------ARVLGGGWTAPK 109 Query 127 GRVGIGLKLTGGRTAQAWARRHQQLRAALTPLVQE 161 G + L+LT R AWAR + L AL L++E Sbjct 110 GTGEVPLRLTDDRVVLAWARDPESLVTALRRLLRE 144 >gi|319949909|ref|ZP_08023910.1| hypothetical protein ES5_10427 [Dietzia cinnamea P4] gi|319436424|gb|EFV91543.1| hypothetical protein ES5_10427 [Dietzia cinnamea P4] Length=116 Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust. Identities = 25/87 (29%), Positives = 40/87 (46%), Gaps = 0/87 (0%) Query 11 LLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVKAARIH 70 +L+ E G SW W+L P + E+ +GA V + + V + + + A R+H Sbjct 21 ILYAEDGWSWAWILAAPAFCAAAAAFELITGAPVHWMMLTVCAVASALCHGVMIAATRVH 80 Query 71 TSVELTHDALRQGTETIRLAEIVKIYP 97 V LT QGTE + + I + P Sbjct 81 GRVRLTPQVYIQGTEELGVDRIDAVLP 107 >gi|134103365|ref|YP_001109026.1| hypothetical protein SACE_6938 [Saccharopolyspora erythraea NRRL 2338] gi|133915988|emb|CAM06101.1| hypothetical protein SACE_6938 [Saccharopolyspora erythraea NRRL 2338] Length=147 Score = 38.5 bits (88), Expect = 0.37, Method: Compositional matrix adjust. Identities = 48/155 (31%), Positives = 71/155 (46%), Gaps = 12/155 (7%) Query 7 TKPKLLFYEPGASWYWVLTGPLAAVSVLLLEISSGAGVGLITPAIFLVMVSAFVALQVKA 66 T+P +L+ E GASW+ VL GP A+ + +E+ + L+ + ++A + V Sbjct 4 TEP-VLYAERGASWWPVLWGPAFALVGVAVELLTPGPRHLVAWLLLAGALAAAATVWVYG 62 Query 67 ARIHTSVELTHDALRQGTETIRLAEIVKIYPEADGRETSGEEPAKWQSARTLGELVGVPR 126 R SV LT L G E + E+ +I D G AR LG P+ Sbjct 63 RRKVCSVRLTPTNLAVGREVL---EVERIAAATDVGAPVG--------ARVLGGGWTAPK 111 Query 127 GRVGIGLKLTGGRTAQAWARRHQQLRAALTPLVQE 161 G + L+LT R AWAR + L AL L++E Sbjct 112 GTGEVPLRLTDDRVVLAWARDPESLVTALRRLLRE 146 >gi|255716494|ref|XP_002554528.1| KLTH0F07480p [Lachancea thermotolerans] gi|238935911|emb|CAR24091.1| KLTH0F07480p [Lachancea thermotolerans] Length=1412 Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 31/144 (22%), Positives = 57/144 (40%), Gaps = 37/144 (25%) Query 35 LLEISSGAGVGLITPAIFLVMVSAFVALQVKAARIHTSV-ELTHDALRQGTETIRLAEIV 93 + + +G+G++ P VS +++ +K A + S EL+HDAL++ T R Sbjct 739 ICSVPQASGIGILDPLRLKPKVSREISVDLKLASVTQSPRELSHDALQESTCVSR----- 793 Query 94 KIYPEADGRETSGEEPAKWQSARTLGELVGVPRGRVGIGLKLTGGRTAQAWARRHQQLRA 153 +AD + EEPA R Q Sbjct 794 ----DADANTDNSEEPAS---------------------------RETNILTVEKNQPEE 822 Query 154 ALTPLVQERLGPVDSDVADVNGDD 177 +TP+ ++R+ V+ + D++GD+ Sbjct 823 PMTPVKEKRVASVNLSLPDISGDN 846 >gi|302818417|ref|XP_002990882.1| hypothetical protein SELMODRAFT_132356 [Selaginella moellendorffii] gi|300141443|gb|EFJ08155.1| hypothetical protein SELMODRAFT_132356 [Selaginella moellendorffii] Length=315 Score = 36.2 bits (82), Expect = 1.9, Method: Compositional matrix adjust. Identities = 17/44 (39%), Positives = 26/44 (60%), Gaps = 0/44 (0%) Query 95 IYPEADGRETSGEEPAKWQSARTLGELVGVPRGRVGIGLKLTGG 138 Y AD + SG E ++W S++ L E+ + +G + IGL L GG Sbjct 127 FYDCADCFDLSGPERSRWVSSKELDEIFSLAKGGIRIGLDLGGG 170 >gi|302785077|ref|XP_002974310.1| hypothetical protein SELMODRAFT_101023 [Selaginella moellendorffii] gi|300157908|gb|EFJ24532.1| hypothetical protein SELMODRAFT_101023 [Selaginella moellendorffii] Length=315 Score = 36.2 bits (82), Expect = 1.9, Method: Compositional matrix adjust. Identities = 17/44 (39%), Positives = 26/44 (60%), Gaps = 0/44 (0%) Query 95 IYPEADGRETSGEEPAKWQSARTLGELVGVPRGRVGIGLKLTGG 138 Y AD + SG E ++W S++ L E+ + +G + IGL L GG Sbjct 127 FYDCADCFDLSGPERSRWVSSKELDEIFSLAKGGIRIGLDLGGG 170 Lambda K H 0.317 0.135 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 164464225230 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40