BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0523c Length=131 Score E Sequences producing significant alignments: (Bits) Value gi|308375186|ref|ZP_07667958.1| hypothetical protein TMGG_03537 ... 265 1e-69 gi|15839917|ref|NP_334954.1| hypothetical protein MT0545 [Mycoba... 265 1e-69 gi|15607663|ref|NP_215037.1| hypothetical protein Rv0523c [Mycob... 265 2e-69 gi|340625550|ref|YP_004744002.1| hypothetical protein MCAN_05261... 263 5e-69 gi|296168233|ref|ZP_06850206.1| conserved hypothetical protein [... 221 3e-56 gi|333989161|ref|YP_004521775.1| hypothetical protein JDM601_052... 209 1e-52 gi|41410116|ref|NP_962952.1| hypothetical protein MAP4018c [Myco... 207 6e-52 gi|254777061|ref|ZP_05218577.1| hypothetical protein MaviaA2_206... 206 1e-51 gi|342858969|ref|ZP_08715623.1| hypothetical protein MCOL_08833 ... 206 1e-51 gi|254818918|ref|ZP_05223919.1| hypothetical protein MintA_03281... 206 1e-51 gi|240171267|ref|ZP_04749926.1| hypothetical protein MkanA1_1828... 202 1e-50 gi|120401874|ref|YP_951703.1| hypothetical protein Mvan_0859 [My... 188 3e-46 gi|118468773|ref|YP_885369.1| hypothetical protein MSMEG_0967 [M... 172 2e-41 gi|169631059|ref|YP_001704708.1| hypothetical protein MAB_3980 [... 164 5e-39 gi|296165663|ref|ZP_06848183.1| conserved hypothetical protein [... 147 4e-34 gi|343928527|ref|ZP_08767974.1| hypothetical protein GOALK_118_0... 133 1e-29 gi|333989160|ref|YP_004521774.1| hypothetical protein JDM601_052... 120 5e-26 gi|108801174|ref|YP_641371.1| hypothetical protein Mmcs_4210 [My... 119 1e-25 gi|315443044|ref|YP_004075923.1| hypothetical protein Mspyr1_141... 113 8e-24 gi|118472950|ref|YP_889619.1| hypothetical protein MSMEG_5376 [M... 113 8e-24 gi|108801183|ref|YP_641380.1| hypothetical protein Mmcs_4219 [My... 113 9e-24 gi|126437017|ref|YP_001072708.1| hypothetical protein Mjls_4446 ... 112 2e-23 gi|145222579|ref|YP_001133257.1| hypothetical protein Mflv_1991 ... 111 3e-23 gi|317507060|ref|ZP_07964823.1| hypothetical protein HMPREF9336_... 110 7e-23 gi|342857425|ref|ZP_08714081.1| hypothetical protein MCOL_01075 ... 108 2e-22 gi|118471013|ref|YP_885368.1| hypothetical protein MSMEG_0966 [M... 101 4e-20 gi|111017866|ref|YP_700838.1| hypothetical protein RHA1_ro00847 ... 97.4 6e-19 gi|326382027|ref|ZP_08203720.1| hypothetical protein SCNU_03747 ... 91.7 3e-17 gi|226359999|ref|YP_002777777.1| hypothetical protein ROP_05850 ... 90.9 6e-17 gi|332669334|ref|YP_004452342.1| hypothetical protein Celf_0815 ... 89.7 1e-16 gi|340532683|gb|AEK47888.1| hypothetical protein RAM_47115 [Amyc... 89.7 1e-16 gi|300790987|ref|YP_003771278.1| hypothetical protein AMED_9187 ... 89.7 1e-16 gi|302531194|ref|ZP_07283536.1| conserved hypothetical protein [... 89.0 2e-16 gi|333919535|ref|YP_004493116.1| hypothetical protein AS9A_1867 ... 88.2 4e-16 gi|54025146|ref|YP_119388.1| hypothetical protein nfa31770 [Noca... 83.6 8e-15 gi|262201791|ref|YP_003272999.1| hypothetical protein Gbro_1850 ... 83.2 1e-14 gi|126433722|ref|YP_001069413.1| hypothetical protein Mjls_1116 ... 81.3 4e-14 gi|336178954|ref|YP_004584329.1| hypothetical protein FsymDg_309... 81.3 5e-14 gi|296139220|ref|YP_003646463.1| hypothetical protein Tpau_1500 ... 78.2 4e-13 gi|317126731|ref|YP_004100843.1| hypothetical protein Intca_3644... 77.4 6e-13 gi|108798061|ref|YP_638258.1| hypothetical protein Mmcs_1088 [My... 76.6 1e-12 gi|118469799|ref|YP_887518.1| hypothetical protein MSMEG_3204 [M... 72.8 2e-11 gi|240168722|ref|ZP_04747381.1| hypothetical protein MkanA1_0537... 72.8 2e-11 gi|254818685|ref|ZP_05223686.1| hypothetical protein MintA_02114... 71.6 4e-11 gi|296166586|ref|ZP_06849016.1| conserved hypothetical protein [... 71.2 5e-11 gi|345003791|ref|YP_004806645.1| hypothetical protein SACTE_6333... 71.2 5e-11 gi|183983386|ref|YP_001851677.1| hypothetical protein MMAR_3396 ... 70.5 8e-11 gi|271965394|ref|YP_003339590.1| hypothetical protein Sros_3931 ... 68.9 3e-10 gi|169629756|ref|YP_001703405.1| hypothetical protein MAB_2671 [... 67.8 5e-10 gi|298247761|ref|ZP_06971566.1| hypothetical protein Krac_5312 [... 67.4 8e-10 >gi|308375186|ref|ZP_07667958.1| hypothetical protein TMGG_03537 [Mycobacterium tuberculosis SUMu007] gi|308347173|gb|EFP36024.1| hypothetical protein TMGG_03537 [Mycobacterium tuberculosis SUMu007] Length=133 Score = 265 bits (678), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 131/131 (100%), Positives = 131/131 (100%), Gaps = 0/131 (0%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV Sbjct 3 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 62 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP Sbjct 63 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 122 Query 121 FDEAVLLTKAD 131 FDEAVLLTKAD Sbjct 123 FDEAVLLTKAD 133 >gi|15839917|ref|NP_334954.1| hypothetical protein MT0545 [Mycobacterium tuberculosis CDC1551] gi|253797455|ref|YP_003030456.1| hypothetical protein TBMG_00530 [Mycobacterium tuberculosis KZN 1435] gi|254230869|ref|ZP_04924196.1| conserved hypothetical protein [Mycobacterium tuberculosis C] 29 more sequence titles Length=134 Score = 265 bits (678), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 131/131 (100%), Positives = 131/131 (100%), Gaps = 0/131 (0%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV Sbjct 4 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 63 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP Sbjct 64 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 123 Query 121 FDEAVLLTKAD 131 FDEAVLLTKAD Sbjct 124 FDEAVLLTKAD 134 >gi|15607663|ref|NP_215037.1| hypothetical protein Rv0523c [Mycobacterium tuberculosis H37Rv] gi|31791705|ref|NP_854198.1| hypothetical protein Mb0536c [Mycobacterium bovis AF2122/97] gi|121636441|ref|YP_976664.1| hypothetical protein BCG_0566c [Mycobacterium bovis BCG str. Pasteur 1173P2] 44 more sequence titles Length=131 Score = 265 bits (677), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 131/131 (100%), Positives = 131/131 (100%), Gaps = 0/131 (0%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV Sbjct 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP Sbjct 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 Query 121 FDEAVLLTKAD 131 FDEAVLLTKAD Sbjct 121 FDEAVLLTKAD 131 >gi|340625550|ref|YP_004744002.1| hypothetical protein MCAN_05261 [Mycobacterium canettii CIPT 140010059] gi|340003740|emb|CCC42866.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=131 Score = 263 bits (673), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 130/131 (99%), Positives = 131/131 (100%), Gaps = 0/131 (0%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV Sbjct 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP Sbjct 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 Query 121 FDEAVLLTKAD 131 FDEAVLLTKA+ Sbjct 121 FDEAVLLTKAN 131 >gi|296168233|ref|ZP_06850206.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896805|gb|EFG76436.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=142 Score = 221 bits (563), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 105/131 (81%), Positives = 120/131 (92%), Gaps = 0/131 (0%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 MQ+PQ LARFNR+VTNP+QRLWAGWLP FAI+EHVGRRSGKPYRTP+NVFSADVDG+ GV Sbjct 12 MQMPQALARFNRHVTNPVQRLWAGWLPPFAIVEHVGRRSGKPYRTPVNVFSADVDGKPGV 71 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 AILLTYGP+RDWLKN+TAAGGGRMRR GK FG+A+PR +TKAEAA +VS RP+FARLP Sbjct 72 AILLTYGPDRDWLKNLTAAGGGRMRRNGKGFGIADPRVVTKAEAAEHVSGGARPIFARLP 131 Query 121 FDEAVLLTKAD 131 F++AVLLTK D Sbjct 132 FEDAVLLTKTD 142 >gi|333989161|ref|YP_004521775.1| hypothetical protein JDM601_0521 [Mycobacterium sp. JDM601] gi|333485129|gb|AEF34521.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=134 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 101/131 (78%), Positives = 115/131 (88%), Gaps = 0/131 (0%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 MQLPQ LARFNR+VTNPIQR+WAGW P+F ILEHVGRRSGKPYRTPL+VFS DGR GV Sbjct 4 MQLPQRLARFNRHVTNPIQRMWAGWAPSFGILEHVGRRSGKPYRTPLSVFSTLDDGRPGV 63 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 AILLTYGP+RDWLKNI AAGGGRMRR+GKTF V+NP+ +TKAEAA +V R + VFARLP Sbjct 64 AILLTYGPDRDWLKNIIAAGGGRMRRHGKTFAVSNPQVVTKAEAAQHVRGRAQAVFARLP 123 Query 121 FDEAVLLTKAD 131 F++AVLLT+ D Sbjct 124 FEQAVLLTRLD 134 >gi|41410116|ref|NP_962952.1| hypothetical protein MAP4018c [Mycobacterium avium subsp. paratuberculosis K-10] gi|118463706|ref|YP_883752.1| hypothetical protein MAV_4623 [Mycobacterium avium 104] gi|41398949|gb|AAS06568.1| hypothetical protein MAP_4018c [Mycobacterium avium subsp. paratuberculosis K-10] gi|118164993|gb|ABK65890.1| conserved hypothetical protein [Mycobacterium avium 104] Length=142 Score = 207 bits (526), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 99/129 (77%), Positives = 116/129 (90%), Gaps = 0/129 (0%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 MQLPQ LARFNR+VTNPIQR+WAGWLP F I+EHVGRRSGKPYRTP+N+FSADVDG+ GV Sbjct 12 MQLPQGLARFNRHVTNPIQRMWAGWLPPFGIVEHVGRRSGKPYRTPVNLFSADVDGKPGV 71 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 AILLTYGP+RDWLKN+TAAGGGR+R GKTFGVA+PR ++KAEAA ++ R VFARLP Sbjct 72 AILLTYGPDRDWLKNLTAAGGGRIRSRGKTFGVADPRVVSKAEAASHLRPGVRGVFARLP 131 Query 121 FDEAVLLTK 129 F++AVLLT+ Sbjct 132 FEQAVLLTR 140 >gi|254777061|ref|ZP_05218577.1| hypothetical protein MaviaA2_20669 [Mycobacterium avium subsp. avium ATCC 25291] gi|336460506|gb|EGO39401.1| deazaflavin-dependent nitroreductase family protein [Mycobacterium avium subsp. paratuberculosis S397] Length=131 Score = 206 bits (524), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 99/129 (77%), Positives = 116/129 (90%), Gaps = 0/129 (0%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 MQLPQ LARFNR+VTNPIQR+WAGWLP F I+EHVGRRSGKPYRTP+N+FSADVDG+ GV Sbjct 1 MQLPQGLARFNRHVTNPIQRMWAGWLPPFGIVEHVGRRSGKPYRTPVNLFSADVDGKPGV 60 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 AILLTYGP+RDWLKN+TAAGGGR+R GKTFGVA+PR ++KAEAA ++ R VFARLP Sbjct 61 AILLTYGPDRDWLKNLTAAGGGRIRSRGKTFGVADPRVVSKAEAASHLRPGVRGVFARLP 120 Query 121 FDEAVLLTK 129 F++AVLLT+ Sbjct 121 FEQAVLLTR 129 >gi|342858969|ref|ZP_08715623.1| hypothetical protein MCOL_08833 [Mycobacterium colombiense CECT 3035] gi|342133210|gb|EGT86413.1| hypothetical protein MCOL_08833 [Mycobacterium colombiense CECT 3035] Length=131 Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 96/129 (75%), Positives = 115/129 (90%), Gaps = 0/129 (0%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 MQLPQ LARFNR+VTNPIQR+WAGWLP+F I+EHVGRRSGKPYRTP+NVF+ DV+G+ GV Sbjct 1 MQLPQGLARFNRHVTNPIQRMWAGWLPSFGIVEHVGRRSGKPYRTPVNVFTTDVEGKPGV 60 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 AILLTYGP+RDWLKN+ AAGGGR+R GK FG+A+PR +TK EAA +V+ R R VFARLP Sbjct 61 AILLTYGPDRDWLKNLKAAGGGRLRSKGKEFGIADPRVVTKDEAAAHVTRRARAVFARLP 120 Query 121 FDEAVLLTK 129 F++AVLLT+ Sbjct 121 FEQAVLLTR 129 >gi|254818918|ref|ZP_05223919.1| hypothetical protein MintA_03281 [Mycobacterium intracellulare ATCC 13950] Length=131 Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 99/128 (78%), Positives = 114/128 (90%), Gaps = 0/128 (0%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 MQLPQ LARFNR+VTNPIQR+WAGWLP+F ILEHVGRRSGKPYRTP+NVF +VDG+ GV Sbjct 1 MQLPQGLARFNRHVTNPIQRMWAGWLPSFGILEHVGRRSGKPYRTPVNVFRTEVDGKPGV 60 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 AILLTYGP+RDWLKN+TAAGGGR+R GKT GVA+PR ++KAEAA +VS R VFARLP Sbjct 61 AILLTYGPDRDWLKNLTAAGGGRLRTRGKTVGVADPRVVSKAEAAAHVSRGVRRVFARLP 120 Query 121 FDEAVLLT 128 F++AVLLT Sbjct 121 FEQAVLLT 128 >gi|240171267|ref|ZP_04749926.1| hypothetical protein MkanA1_18281 [Mycobacterium kansasii ATCC 12478] Length=131 Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 93/131 (71%), Positives = 111/131 (85%), Gaps = 0/131 (0%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 MQ PQ LARFNR+VTNPIQR+WAGWLP FA +EHVGRRSGKPYRTP+N F A VDG+ GV Sbjct 1 MQFPQRLARFNRHVTNPIQRMWAGWLPPFATIEHVGRRSGKPYRTPVNAFEATVDGKPGV 60 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 A++LTYGP+RDWLKN+ AAGGGRMRR KTFG+ +PR ++ AEAAP V++ WRP+FARLP Sbjct 61 AVVLTYGPDRDWLKNLRAAGGGRMRRRAKTFGITDPRVVSMAEAAPQVTAGWRPIFARLP 120 Query 121 FDEAVLLTKAD 131 F+ AVL T+ Sbjct 121 FESAVLFTRTS 131 >gi|120401874|ref|YP_951703.1| hypothetical protein Mvan_0859 [Mycobacterium vanbaalenii PYR-1] gi|119954692|gb|ABM11697.1| hypothetical protein Mvan_0859 [Mycobacterium vanbaalenii PYR-1] Length=126 Score = 188 bits (477), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 95/131 (73%), Positives = 106/131 (81%), Gaps = 6/131 (4%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFS-ADVDGRAG 59 MQLPQWLARFNR+VTNPIQRLWAGW P ILEH GR+SGK YRTPL VFS AD G Sbjct 1 MQLPQWLARFNRHVTNPIQRLWAGWAPTMGILEHAGRKSGKRYRTPLTVFSTAD-----G 55 Query 60 VAILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARL 119 VAILLTYGP+RDWLKN+ AAGGG MRRYG+TF V +PR +TKAEAAP V+ RPVFA L Sbjct 56 VAILLTYGPDRDWLKNVVAAGGGTMRRYGRTFAVRDPRVMTKAEAAPLVTGVMRPVFALL 115 Query 120 PFDEAVLLTKA 130 PF++AVLL + Sbjct 116 PFEQAVLLDRG 126 >gi|118468773|ref|YP_885369.1| hypothetical protein MSMEG_0967 [Mycobacterium smegmatis str. MC2 155] gi|118170060|gb|ABK70956.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=126 Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 86/130 (67%), Positives = 99/130 (77%), Gaps = 4/130 (3%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 MQLPQWLARFNR+VTNPIQR+WAGW P F ILEHVGR+SGK YRTPL+VF D GV Sbjct 1 MQLPQWLARFNRHVTNPIQRIWAGWAPTFGILEHVGRKSGKHYRTPLSVFGTD----EGV 56 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 AILLTYGP+RDWLKN+TAAG MRR+GKT V +PR + + EA V R V ARLP Sbjct 57 AILLTYGPDRDWLKNLTAAGTADMRRHGKTIRVTDPRVVPRDEAVARVRGPIRKVLARLP 116 Query 121 FDEAVLLTKA 130 F++AVLL + Sbjct 117 FEQAVLLRRV 126 >gi|169631059|ref|YP_001704708.1| hypothetical protein MAB_3980 [Mycobacterium abscessus ATCC 19977] gi|169243026|emb|CAM64054.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=123 Score = 164 bits (414), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 82/130 (64%), Positives = 100/130 (77%), Gaps = 7/130 (5%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 MQ+PQ +ARFN+YVTNP+QRLWAGW P+FAI+EH GR+SGK +RTP+ F+ GV Sbjct 1 MQIPQSVARFNKYVTNPVQRLWAGWAPSFAIIEHKGRKSGKEFRTPVTAFTTP----DGV 56 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 AILLTYGP+RDWLKN+ AAGGGR+ R GKT V NPR +++ EAA V SR F RLP Sbjct 57 AILLTYGPDRDWLKNLQAAGGGRVVRRGKTHDVVNPRVVSRDEAATLVKSR---AFGRLP 113 Query 121 FDEAVLLTKA 130 F++AVLLT A Sbjct 114 FEQAVLLTYA 123 >gi|296165663|ref|ZP_06848183.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898980|gb|EFG78466.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=131 Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 72/131 (55%), Positives = 92/131 (71%), Gaps = 5/131 (3%) Query 2 QLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGVA 61 Q P+W AR+NR VTN I RLWAGW+PA +L HVGR+SGK YRTPLN+F G+A Sbjct 5 QFPRWYARWNRLVTNKIVRLWAGWVPAMGLLTHVGRKSGKRYRTPLNIFPTG----EGLA 60 Query 62 ILLTYGP-NRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 + L YGP + +WLKN+TAAG ++ YGKT V +P +TKA+A P V SRWRP++AR P Sbjct 61 VFLPYGPAHTEWLKNVTAAGSAEIQHYGKTITVTDPHVVTKADAQPLVVSRWRPIYARAP 120 Query 121 FDEAVLLTKAD 131 F E +LL + Sbjct 121 FAEVLLLKTGN 131 >gi|343928527|ref|ZP_08767974.1| hypothetical protein GOALK_118_00180 [Gordonia alkanivorans NBRC 16433] gi|343761538|dbj|GAA14900.1| hypothetical protein GOALK_118_00180 [Gordonia alkanivorans NBRC 16433] Length=129 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 69/130 (54%), Positives = 87/130 (67%), Gaps = 4/130 (3%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 M+ PQW AR+NR+ TN + RLWAGW+P+ ILEH GR SG PYRTPL VF GV Sbjct 1 MRFPQWYARWNRFATNKLVRLWAGWMPSMGILEHRGRTSGTPYRTPLLVFPIP----DGV 56 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 AIL+ YGP W KN+ AAG ++R G+ + V +PR TK AA V +RP++A +P Sbjct 57 AILVGYGPGTQWRKNLVAAGSATLQRNGRRYTVTSPRSSTKKAAAGSVRWPYRPLYAVVP 116 Query 121 FDEAVLLTKA 130 FDEA+LLT A Sbjct 117 FDEAILLTTA 126 >gi|333989160|ref|YP_004521774.1| hypothetical protein JDM601_0520 [Mycobacterium sp. JDM601] gi|333485128|gb|AEF34520.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=126 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 65/131 (50%), Positives = 85/131 (65%), Gaps = 6/131 (4%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVF-SADVDGRAG 59 MQ + ARFNR VTNP+ R +GW+P ++I+EH GRRSG YRTP+++F +AD G Sbjct 1 MQFSERRARFNRVVTNPLFRPISGWVPMWSIIEHTGRRSGATYRTPVSMFHTAD-----G 55 Query 60 VAILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARL 119 VA+LL YG RDW+KN+ AA GGR + GKTF V NPR + EAA + S WR + R Sbjct 56 VAVLLPYGTGRDWVKNLQAANGGRAKMGGKTFAVTNPRVVPTGEAAGLLKSPWRQLLGRA 115 Query 120 PFDEAVLLTKA 130 +LL +A Sbjct 116 GVAHTLLLDRA 126 >gi|108801174|ref|YP_641371.1| hypothetical protein Mmcs_4210 [Mycobacterium sp. MCS] gi|119870306|ref|YP_940258.1| hypothetical protein Mkms_4276 [Mycobacterium sp. KMS] gi|126437008|ref|YP_001072699.1| hypothetical protein Mjls_4437 [Mycobacterium sp. JLS] gi|108771593|gb|ABG10315.1| hypothetical protein Mmcs_4210 [Mycobacterium sp. MCS] gi|119696395|gb|ABL93468.1| Mycobacterium tuberculosis paralogous family 11 [Mycobacterium sp. KMS] gi|126236808|gb|ABO00209.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=131 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 61/127 (49%), Positives = 82/127 (65%), Gaps = 4/127 (3%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 M++P+ +A FN+ VTNP+ R WLP LEHVGR+SGK YRTPL VF + G Sbjct 1 MRVPRRIAEFNKRVTNPVARTITPWLPGLGTLEHVGRKSGKRYRTPLLVF----ETHDGY 56 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 AIL+ YGP DWLKN+ A G +R+ G+ + NPR ++KAEAA V+ R R ++ P Sbjct 57 AILIGYGPQTDWLKNVLAGGPTVLRKRGRAVALVNPRVVSKAEAAALVTPRSRLLYRAFP 116 Query 121 FDEAVLL 127 ++EA LL Sbjct 117 YNEAALL 123 >gi|315443044|ref|YP_004075923.1| hypothetical protein Mspyr1_14140 [Mycobacterium sp. Spyr1] gi|315261347|gb|ADT98088.1| conserved hypothetical protein TIGR00026 [Mycobacterium sp. Spyr1] Length=129 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 61/126 (49%), Positives = 81/126 (65%), Gaps = 6/126 (4%) Query 3 LPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVF-SADVDGRAGVA 61 +P+ +A FNR VTNP R WLP LEHVGR+SG+PYRTPL VF +AD G A Sbjct 1 MPRRVAEFNRRVTNPAARSLTPWLPNLGTLEHVGRKSGRPYRTPLLVFETAD-----GYA 55 Query 62 ILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLPF 121 IL+ YG DW+KN+ A G + + G+ + +PR ++KAEAAP V +R RP + P+ Sbjct 56 ILIGYGLQTDWVKNVLAGGPTVLHKRGRAVVLTDPRVVSKAEAAPLVVARARPFYRLFPY 115 Query 122 DEAVLL 127 +EA LL Sbjct 116 NEAALL 121 >gi|118472950|ref|YP_889619.1| hypothetical protein MSMEG_5376 [Mycobacterium smegmatis str. MC2 155] gi|118174237|gb|ABK75133.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=131 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 60/127 (48%), Positives = 78/127 (62%), Gaps = 4/127 (3%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 M+ P+ +A FN+ TNP R WLP LEHVGR+SGK YRTPL VF + G Sbjct 1 MRAPRQVAEFNKRFTNPAARAITPWLPYLGTLEHVGRKSGKCYRTPLLVF----ETHDGY 56 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 AIL+ YGP DWLKN+ A G + + G+ + NPR ++KAEAA V+ R R ++ P Sbjct 57 AILVGYGPQTDWLKNVLAGGQTVLHKRGRAIALGNPRVVSKAEAAALVAPRSRWLYRVFP 116 Query 121 FDEAVLL 127 +DEA LL Sbjct 117 YDEATLL 123 >gi|108801183|ref|YP_641380.1| hypothetical protein Mmcs_4219 [Mycobacterium sp. MCS] gi|119870315|ref|YP_940267.1| hypothetical protein Mkms_4285 [Mycobacterium sp. KMS] gi|108771602|gb|ABG10324.1| hypothetical protein Mmcs_4219 [Mycobacterium sp. MCS] gi|119696404|gb|ABL93477.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=131 Score = 113 bits (283), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 62/132 (47%), Positives = 82/132 (63%), Gaps = 5/132 (3%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 M++P+ +ARFNR VTNP R WLP LEHVGR+SGK YRTPL VF + G Sbjct 1 MRMPRRVARFNRRVTNPAARAITPWLPNLGTLEHVGRKSGKRYRTPLLVFPTE----EGY 56 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 AIL+ YG DW+KN+ A G + + G+ + NPR + KAEAA V+ R R + P Sbjct 57 AILIGYGLQTDWVKNVLAGGSTVLHKRGRAVTLTNPRVVDKAEAAALVAPRSRLFYRAFP 116 Query 121 FDE-AVLLTKAD 131 ++E A+LLT+ D Sbjct 117 YNEAALLLTRVD 128 >gi|126437017|ref|YP_001072708.1| hypothetical protein Mjls_4446 [Mycobacterium sp. JLS] gi|126236817|gb|ABO00218.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=131 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 63/132 (48%), Positives = 82/132 (63%), Gaps = 5/132 (3%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 M++P+ +A+FNR VTNP R WLP LEHVGR+SGK YRTPL VF + G Sbjct 1 MRMPRGVAQFNRRVTNPAARAITPWLPNLGTLEHVGRKSGKRYRTPLLVFPTE----EGY 56 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 AIL+ YG DWLKN+ A G + + G + NPR + KAEAA V+ R R + P Sbjct 57 AILVGYGLQTDWLKNVLAGGPTVLHKRGHAVTLTNPRVVDKAEAAALVAPRSRLFYRAFP 116 Query 121 FDE-AVLLTKAD 131 ++E A+LLT+AD Sbjct 117 YNEAALLLTRAD 128 >gi|145222579|ref|YP_001133257.1| hypothetical protein Mflv_1991 [Mycobacterium gilvum PYR-GCK] gi|145215065|gb|ABP44469.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=129 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 62/130 (48%), Positives = 83/130 (64%), Gaps = 7/130 (5%) Query 3 LPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVF-SADVDGRAGVA 61 +P+ +A FNR VTNP + WLP LEHVGR+S + YRTPL VF +AD G A Sbjct 1 MPRRVAEFNRRVTNPATKSLTPWLPNLGTLEHVGRKSARRYRTPLLVFETAD-----GYA 55 Query 62 ILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLPF 121 IL+ YGP DW+KN+ A G + + G+ + +PR ++KAEAAP V +R RP + P+ Sbjct 56 ILIGYGPQTDWVKNVLAGGPTVLHKRGRAVVLTDPRVVSKAEAAPLVVARARPFYRLFPY 115 Query 122 DE-AVLLTKA 130 DE A+LLT A Sbjct 116 DEGALLLTDA 125 >gi|317507060|ref|ZP_07964823.1| hypothetical protein HMPREF9336_01194 [Segniliparus rugosus ATCC BAA-974] gi|316254635|gb|EFV13942.1| hypothetical protein HMPREF9336_01194 [Segniliparus rugosus ATCC BAA-974] Length=124 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 55/104 (53%), Positives = 66/104 (64%), Gaps = 4/104 (3%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 MQLPQWLAR NR VTNP+ W P F ++H GR SGK Y TP+ +FSA Sbjct 1 MQLPQWLARMNRRVTNPVLGAITPWAPLFGTIKHKGRSSGKTYSTPVTLFSAP----ESF 56 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEA 104 ++LTYGP+RDWLKN+ AA GG + GKT + PR L KAEA Sbjct 57 VVILTYGPDRDWLKNLAAAKGGEVVHLGKTVSIGPPRVLPKAEA 100 >gi|342857425|ref|ZP_08714081.1| hypothetical protein MCOL_01075 [Mycobacterium colombiense CECT 3035] gi|342134758|gb|EGT87924.1| hypothetical protein MCOL_01075 [Mycobacterium colombiense CECT 3035] Length=131 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 63/132 (48%), Positives = 79/132 (60%), Gaps = 5/132 (3%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 M++P+ +A FNR VTNP R WLP LEHVGR+SGK YRTPL VF R G Sbjct 1 MRVPRAVANFNRRVTNPAARSITPWLPGQGTLEHVGRKSGKRYRTPLLVFPT----RDGF 56 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 IL+ YG DWLKN+ A G + + GK +ANPR L+KAEAA V+ + P Sbjct 57 VILIGYGLKSDWLKNVFAGGQALLHKRGKGIALANPRLLSKAEAATLVTGPSGVFYRLFP 116 Query 121 FDEAVL-LTKAD 131 ++EA L LTK + Sbjct 117 YNEAALVLTKVN 128 >gi|118471013|ref|YP_885368.1| hypothetical protein MSMEG_0966 [Mycobacterium smegmatis str. MC2 155] gi|118172300|gb|ABK73196.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=127 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 60/132 (46%), Positives = 80/132 (61%), Gaps = 6/132 (4%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFS-ADVDGRAG 59 M L ARFNR V N I R +G + ++++EH+GRRSG YRTP+ +F AD G Sbjct 1 MLLADERARFNRRVINRIVRPLSGRVAMWSLIEHLGRRSGTVYRTPVTMFRVAD-----G 55 Query 60 VAILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARL 119 VAILL YG +RDW++N+ AA GGR G+TF V +PR + AE P + WR V RL Sbjct 56 VAILLPYGEDRDWVRNLFAARGGRAVMNGETFEVTDPRIVPTAEVVPRLGRPWRAVVGRL 115 Query 120 PFDEAVLLTKAD 131 A++L + D Sbjct 116 RTPSALVLRRTD 127 >gi|111017866|ref|YP_700838.1| hypothetical protein RHA1_ro00847 [Rhodococcus jostii RHA1] gi|110817396|gb|ABG92680.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=125 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 52/102 (51%), Positives = 67/102 (66%), Gaps = 4/102 (3%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 M LP+ +ARFNR VTN + R A LP FA++EH GRRSGKPYRTP+NVF VDGR Sbjct 1 MALPRSVARFNRVVTNQVSRHVATILPGFAMVEHRGRRSGKPYRTPVNVFV--VDGRYRF 58 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKA 102 A LTYG DW++N+ AAGG + +T + +P +T + Sbjct 59 A--LTYGAQSDWVRNVVAAGGCTIVTRRRTVHLTDPSVVTDS 98 >gi|326382027|ref|ZP_08203720.1| hypothetical protein SCNU_03747 [Gordonia neofelifaecis NRRL B-59395] gi|326199453|gb|EGD56634.1| hypothetical protein SCNU_03747 [Gordonia neofelifaecis NRRL B-59395] Length=124 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 47/99 (48%), Positives = 64/99 (65%), Gaps = 4/99 (4%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 M++P +AR N+YVTNPIQ LWA L +A++EH+GR+S + YRTP+ F DGR + Sbjct 1 MKVPHVVARINKYVTNPIQGLWADRLAPWAVVEHIGRKSNRQYRTPVLAFVD--DGR--I 56 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRL 99 +I L YG DW+KN+ AAG + R GK +A R L Sbjct 57 SIALNYGTESDWVKNVLAAGEFTLIREGKPLAIAGARIL 95 >gi|226359999|ref|YP_002777777.1| hypothetical protein ROP_05850 [Rhodococcus opacus B4] gi|226238484|dbj|BAH48832.1| hypothetical protein [Rhodococcus opacus B4] Length=125 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 49/97 (51%), Positives = 63/97 (65%), Gaps = 4/97 (4%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 M LP+ +ARFNR VTN + R A LP FA++EH GR+SGK Y TP+NVF VDGR Sbjct 1 MALPRSIARFNRVVTNRVSRHVASILPGFAMVEHRGRKSGKSYHTPVNVFV--VDGRYRF 58 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPR 97 A LTYG DW++N+ AAGG + +T + +PR Sbjct 59 A--LTYGARSDWVRNVVAAGGCTIVTRRRTVHLTDPR 93 >gi|332669334|ref|YP_004452342.1| hypothetical protein Celf_0815 [Cellulomonas fimi ATCC 484] gi|332338372|gb|AEE44955.1| hypothetical protein Celf_0815 [Cellulomonas fimi ATCC 484] Length=141 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/127 (41%), Positives = 67/127 (53%), Gaps = 4/127 (3%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 M +P W+ R NR VTNP+ + +P A L HVGR SG+ YRTP+ F R GV Sbjct 1 MPIPMWVTRVNRRVTNPVLGAVSDRVPPLATLHHVGRTSGRRYRTPVMAFRT----RRGV 56 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 + LTYGP+ WL N+ AAGG R+ + G+ + +P RL A V R L Sbjct 57 VVALTYGPHVQWLSNVDAAGGARLVQRGRVLVLDDPVRLRGDAGARLVPRVVRLALRALH 116 Query 121 FDEAVLL 127 DE V L Sbjct 117 VDEFVEL 123 >gi|340532683|gb|AEK47888.1| hypothetical protein RAM_47115 [Amycolatopsis mediterranei S699] Length=125 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/129 (41%), Positives = 70/129 (55%), Gaps = 5/129 (3%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 M LP+ LARFNR VTN I + GW P F +L H GR+SG+ YRTPLNVF G Sbjct 1 MVLPKGLARFNRVVTNRINKHVVGWAPGFGLLVHKGRKSGREYRTPLNVFRTG----DGF 56 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 + LTYGP+ DW+KN+ AA + K + V +P L E+ + + R L Sbjct 57 VVALTYGPDTDWVKNVLAAESCTIITQRKNYRVHSP-ELVHDESRRAMPTPVRQFLGLLN 115 Query 121 FDEAVLLTK 129 + +LL + Sbjct 116 VHDFLLLKR 124 >gi|300790987|ref|YP_003771278.1| hypothetical protein AMED_9187 [Amycolatopsis mediterranei U32] gi|299800501|gb|ADJ50876.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] Length=128 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/129 (41%), Positives = 70/129 (55%), Gaps = 5/129 (3%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 M LP+ LARFNR VTN I + GW P F +L H GR+SG+ YRTPLNVF G Sbjct 4 MVLPKGLARFNRVVTNRINKHVVGWAPGFGLLVHKGRKSGREYRTPLNVFRTG----DGF 59 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 + LTYGP+ DW+KN+ AA + K + V +P L E+ + + R L Sbjct 60 VVALTYGPDTDWVKNVLAAESCTIITQRKNYRVHSP-ELVHDESRRAMPTPVRQFLGLLN 118 Query 121 FDEAVLLTK 129 + +LL + Sbjct 119 VHDFLLLKR 127 >gi|302531194|ref|ZP_07283536.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302440089|gb|EFL11905.1| conserved hypothetical protein [Streptomyces sp. AA4] Length=125 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 44/97 (46%), Positives = 64/97 (66%), Gaps = 6/97 (6%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVF-SADVDGRAG 59 M LP+ LARFNR VTN + + +A LP F ++ H GR+SG+ +RTPLN+F +AD G Sbjct 1 MVLPERLARFNRVVTNRVTKPFADKLPGFGVIVHRGRKSGREFRTPLNIFRTAD-----G 55 Query 60 VAILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANP 96 + LTYGP+ DW++N+ AAG + G+ + V +P Sbjct 56 FVVALTYGPDTDWVRNVLAAGEAEVLTRGRKYRVRDP 92 >gi|333919535|ref|YP_004493116.1| hypothetical protein AS9A_1867 [Amycolicicoccus subflavus DQS3-9A1] gi|333481756|gb|AEF40316.1| hypothetical protein AS9A_1867 [Amycolicicoccus subflavus DQS3-9A1] Length=126 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 52/119 (44%), Positives = 64/119 (54%), Gaps = 9/119 (7%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 M P LARFNR+VTN + L AG +P + I+ H GRRSG Y+TP+NVF DG G Sbjct 1 MPFPVVLARFNRHVTNRLAMLAAGRVPGYGIVVHKGRRSGNVYQTPVNVFP---DGSGGY 57 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARL 119 I LTYG DW++N+ AAG + G + NP T W P FARL Sbjct 58 RIALTYGTGSDWVQNVLAAGECTLETRGTAVTLVNPVVETDRRYG------WAPPFARL 110 >gi|54025146|ref|YP_119388.1| hypothetical protein nfa31770 [Nocardia farcinica IFM 10152] gi|54016654|dbj|BAD58024.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=131 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 53/121 (44%), Positives = 69/121 (58%), Gaps = 7/121 (5%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 M LP+ LA NR++TNP R AG +P A++ H GRRSG+ Y TP+ F+ DG Sbjct 1 MVLPRSLATLNRHLTNPAARPVAGRVPPAAVVVHRGRRSGRTYETPVLAFA---DGPV-Y 56 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAA---PYVSSRWRPVFA 117 I LTYGP DWLKN+ AAG +RR G+T + +P + AA P V R + A Sbjct 57 RIALTYGPGVDWLKNVRAAGRFELRRTGRTLTLVDPEVIEDPAAAWAPPVVRQVLRAIGA 116 Query 118 R 118 R Sbjct 117 R 117 >gi|262201791|ref|YP_003272999.1| hypothetical protein Gbro_1850 [Gordonia bronchialis DSM 43247] gi|262085138|gb|ACY21106.1| hypothetical protein Gbro_1850 [Gordonia bronchialis DSM 43247] Length=124 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 44/97 (46%), Positives = 64/97 (66%), Gaps = 4/97 (4%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 M++P +AR N+ VTNPIQR+WA L +A++EHVGR+SG+ Y P+ + V G + Sbjct 1 MKIPAVVARINKKVTNPIQRMWAPRLAPYAMVEHVGRKSGRKYSNPVLAW---VQGDR-L 56 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPR 97 AI+LTYG + DW++N+ AAG + R K + V PR Sbjct 57 AIVLTYGRHTDWVRNVQAAGSFGLVRKSKHYTVTGPR 93 >gi|126433722|ref|YP_001069413.1| hypothetical protein Mjls_1116 [Mycobacterium sp. JLS] gi|126233522|gb|ABN96922.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=142 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 51/122 (42%), Positives = 69/122 (57%), Gaps = 5/122 (4%) Query 10 FNRYVTNPIQRLWAGWLPAFA-ILEHVGRRSGKPYRTPLNVFSADVDGRAGVAILLTYGP 68 FN+YV NP+ RL AG +A ++ H GRRSGK Y TP+ V DG I L YG Sbjct 16 FNKYVLNPVMRLPAGRKHWYASVIRHTGRRSGKTYTTPV-VAEQVADG---FVIPLPYGT 71 Query 69 NRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLPFDEAVLLT 128 + DWL+N+ AG + G+T V +P+ + A AAP++S+R R F R + V LT Sbjct 72 DVDWLRNVVTAGRATIVSGGRTVEVVDPQVIDAATAAPHLSARRRRTFERFGIERFVRLT 131 Query 129 KA 130 A Sbjct 132 AA 133 >gi|336178954|ref|YP_004584329.1| hypothetical protein FsymDg_3098 [Frankia symbiont of Datisca glomerata] gi|334859934|gb|AEH10408.1| hypothetical protein FsymDg_3098 [Frankia symbiont of Datisca glomerata] Length=139 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 44/127 (35%), Positives = 68/127 (54%), Gaps = 5/127 (3%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 M LP+W+A NR TN + A LP F ++ H GR+SG+ YRTP+NVF +D G Sbjct 1 MPLPKWIASANRRATNRVTGPAATRLPGFGVIVHRGRQSGREYRTPVNVFGSD----GGY 56 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 + LTYG + DW++N+ AAGG + + +P + ++ V + RPV + Sbjct 57 VVALTYGSDSDWVRNVLAAGGCVLEHRNHREELGSP-HIVHDDSRSQVPAPLRPVLGAIG 115 Query 121 FDEAVLL 127 + + L Sbjct 116 VSDFLTL 122 >gi|296139220|ref|YP_003646463.1| hypothetical protein Tpau_1500 [Tsukamurella paurometabola DSM 20162] gi|296027354|gb|ADG78124.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=158 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 42/106 (40%), Positives = 62/106 (59%), Gaps = 4/106 (3%) Query 9 RFNRYVTNPIQRLWAGWLPAF-AILEHVGRRSGKPYRTPLNVFSADVDGRAGVAILLTYG 67 RFNR VTNP+ A + ++ HVGR+SGK Y+TP++ F G + + L YG Sbjct 39 RFNRAVTNPLAVGDAEKEDSTRTVVRHVGRKSGKAYQTPVDAFET---GSDTLIVALPYG 95 Query 68 PNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWR 113 P DW++NITAAGG + R+G+ F V+ PR + A+ + + R Sbjct 96 PGTDWVRNITAAGGADVLRHGREFAVSAPRVVATADVVDRLPASLR 141 >gi|317126731|ref|YP_004100843.1| hypothetical protein Intca_3644 [Intrasporangium calvum DSM 43043] gi|315590819|gb|ADU50116.1| hypothetical protein Intca_3644 [Intrasporangium calvum DSM 43043] Length=133 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 52/118 (45%), Positives = 63/118 (54%), Gaps = 9/118 (7%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAG- 59 M +P ++ FN+ TN AG P F LEHVGRR+G YR PL V R G Sbjct 1 MPIPHFVTGFNKRYTNRALVHLAGRGP-FVELEHVGRRTGAVYRVPL------VALRHGE 53 Query 60 -VAILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVF 116 V I LTYGPN DWLKN+ AAGGGRM + + PRRL A+ + RP+ Sbjct 54 RVTIALTYGPNVDWLKNLRAAGGGRMHLGTRLLQLGPPRRLPTADGLQRMPRVARPIL 111 >gi|108798061|ref|YP_638258.1| hypothetical protein Mmcs_1088 [Mycobacterium sp. MCS] gi|119867157|ref|YP_937109.1| hypothetical protein Mkms_1105 [Mycobacterium sp. KMS] gi|108768480|gb|ABG07202.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119693246|gb|ABL90319.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=142 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/122 (41%), Positives = 67/122 (55%), Gaps = 5/122 (4%) Query 10 FNRYVTNPIQRLWAGWLPAFA-ILEHVGRRSGKPYRTPLNVFSADVDGRAGVAILLTYGP 68 FN+YV NP+ RL AG +A ++ H G RSGK Y TP+ V DG I L YG Sbjct 16 FNKYVLNPVMRLPAGRKHWYASVIRHTGCRSGKTYTTPV-VAEQVADG---FVIPLPYGT 71 Query 69 NRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLPFDEAVLLT 128 + DWL+N+ AG + G+T V +P+ + A AAP++S+R R F R + V L Sbjct 72 DVDWLRNVVTAGRATIVSGGRTVEVVDPQVIDAATAAPHLSARRRRTFERFGIERFVRLM 131 Query 129 KA 130 A Sbjct 132 AA 133 >gi|118469799|ref|YP_887518.1| hypothetical protein MSMEG_3204 [Mycobacterium smegmatis str. MC2 155] gi|118171086|gb|ABK71982.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=122 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/128 (34%), Positives = 65/128 (51%), Gaps = 10/128 (7%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 M P WL R NP+ A LP F +++H GR+SG+ Y T +N + D Sbjct 1 MLFPPWLERLQLKYVNPVMTPVAKRLPGFTVIKHRGRKSGRAYETVVNSYRKD----NVF 56 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 A++L +G +W+KN+ AAGG ++ +G+ F + NPR L P + P ARL Sbjct 57 AVILAHG-KTNWVKNVLAAGGAEVKVFGREFEITNPRILPAGSDDPSL-----PRIARLS 110 Query 121 FDEAVLLT 128 +A +L Sbjct 111 ARKAGILV 118 >gi|240168722|ref|ZP_04747381.1| hypothetical protein MkanA1_05375 [Mycobacterium kansasii ATCC 12478] Length=133 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/96 (40%), Positives = 56/96 (59%), Gaps = 4/96 (4%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 M P+W+AR N+ N + R A W P + ++ H GR+SG+ +RTPL VF D G Sbjct 1 MPAPRWVARANKIGLNRVTRYIAPWAPGWGVVIHRGRKSGRVFRTPLWVFRRD----NGF 56 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANP 96 I LTYGP DW++N+ AAGG ++ + + + P Sbjct 57 VIALTYGPGTDWVRNVLAAGGCELQTRRRHYQLGAP 92 >gi|254818685|ref|ZP_05223686.1| hypothetical protein MintA_02114 [Mycobacterium intracellulare ATCC 13950] Length=133 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/96 (40%), Positives = 55/96 (58%), Gaps = 4/96 (4%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 M P+W+AR N+ N + A W P +AI+ H GR+SG+ +RTPL F R G Sbjct 1 MPAPRWVARANKIGLNRFTKYIAPWAPGWAIVVHRGRKSGRTFRTPLWAFRR----RNGF 56 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANP 96 I LTYGP DW++N+ AAGG ++ + + + P Sbjct 57 VIALTYGPETDWVRNVLAAGGCELQTRRRRYQLGAP 92 >gi|296166586|ref|ZP_06849016.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898072|gb|EFG77648.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=140 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 47/118 (40%), Positives = 63/118 (54%), Gaps = 9/118 (7%) Query 11 NRYVTNPIQRLWAG---WLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGVAILLTYG 67 N+Y+ NP+ AG W A +EH GRRSGK Y TP+ V DG I L YG Sbjct 21 NKYLLNPLMLRLAGRKNWYAA--AIEHTGRRSGKVYTTPV-VAERTTDG---FLIPLPYG 74 Query 68 PNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLPFDEAV 125 + DWL+N+ AAG + +G+T+ V P + AEA P VS+ R F R+ + V Sbjct 75 TDVDWLQNLRAAGRATISSHGETYQVVQPEIVDAAEALPMVSASRRRTFERVGIEAYV 132 >gi|345003791|ref|YP_004806645.1| hypothetical protein SACTE_6333 [Streptomyces sp. SirexAA-E] gi|344319417|gb|AEN14105.1| conserved hypothetical protein [Streptomyces sp. SirexAA-E] Length=133 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 44/131 (34%), Positives = 65/131 (50%), Gaps = 5/131 (3%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 M +P+ +ARFNR V N +P F + H GR+SG+ Y TP+ +F D + Sbjct 1 MPIPRRVARFNRRVANRFVGPVLSRMPGFGRVHHRGRKSGRVYSTPVKLFRRGAD----I 56 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEAAPYVSSRWRPVFARLP 120 + L YGP DW+KN+ AAGG + G + NP T + + + R V +R+ Sbjct 57 VVTLPYGPGSDWVKNVLAAGGCEITTRGHRIHLDNPVVFTD-DGRTAMPALTRAVLSRVG 115 Query 121 FDEAVLLTKAD 131 E + LT A Sbjct 116 ATEFLALTPAS 126 >gi|183983386|ref|YP_001851677.1| hypothetical protein MMAR_3396 [Mycobacterium marinum M] gi|183176712|gb|ACC41822.1| conserved hypothetical protein [Mycobacterium marinum M] Length=133 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 36/96 (38%), Positives = 55/96 (58%), Gaps = 4/96 (4%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 M P+W+A+ N+ N + A W P +A++ H GR+SG+ +RTPL F R G Sbjct 1 MPAPRWVAKANKISLNRFTKYVAPWAPGWAVVVHRGRKSGRTFRTPLWAFHR----RNGF 56 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANP 96 I LTYG + DW+KN+ AAGG + + + + +P Sbjct 57 VIALTYGTSSDWVKNVLAAGGCELETRRRRYQLGDP 92 >gi|271965394|ref|YP_003339590.1| hypothetical protein Sros_3931 [Streptosporangium roseum DSM 43021] gi|270508569|gb|ACZ86847.1| hypothetical protein Sros_3931 [Streptosporangium roseum DSM 43021] Length=124 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/104 (39%), Positives = 53/104 (51%), Gaps = 8/104 (7%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAGV 60 M +P+W N+ V NP W +L HVGR SG YRTPL+ D G Sbjct 1 MPMPRWWGHVNKRVFNPRAIASGTW----PVLTHVGRVSGTTYRTPLDAHPVD----GGY 52 Query 61 AILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEA 104 +L YG DW++N+ AA G R+R G+ +A PR + K EA Sbjct 53 LFVLVYGSRSDWVQNVLAANGARLRVDGREVELAAPRLVGKDEA 96 >gi|169629756|ref|YP_001703405.1| hypothetical protein MAB_2671 [Mycobacterium abscessus ATCC 19977] gi|169241723|emb|CAM62751.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=124 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 44/121 (37%), Positives = 62/121 (52%), Gaps = 10/121 (8%) Query 1 MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRSGKPYRTPLNVFSADVDGRAG- 59 M LP+WL R NP+ A +LP+FA + H GR SG Y T +N F R G Sbjct 1 MLLPEWLERAQIKYINPLMAPIARFLPSFATVTHYGRTSGTKYETTVNAF------RKGN 54 Query 60 -VAILLTYGPNRDWLKNITAAGGGRMRRY-GKTFGVANPRRLTKAEAAPYVSSRWRPVFA 117 V+I L +G +W KN+ AAGG + + G+ V NPR + + + P ++ R V Sbjct 55 VVSIALIHGKT-NWTKNVIAAGGADITLFGGRQIHVVNPRIVEQGQGDPALTRATRQVNK 113 Query 118 R 118 R Sbjct 114 R 114 >gi|298247761|ref|ZP_06971566.1| hypothetical protein Krac_5312 [Ktedonobacter racemifer DSM 44963] gi|297550420|gb|EFH84286.1| hypothetical protein Krac_5312 [Ktedonobacter racemifer DSM 44963] Length=142 Score = 67.4 bits (163), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/105 (41%), Positives = 56/105 (54%), Gaps = 7/105 (6%) Query 2 QLPQWLARFNRYVTNPIQRLWAGWLP--AFAILEHVGRRSGKPYRTPLNVFSADVDGRAG 59 P + FN+YVTN + R A LP FA+L HVGRRSGK Y + V+ + G Sbjct 1 MFPDRIRVFNKYVTNRVLRGLA-ILPFGPFALLRHVGRRSGKSYEIVIMVWPLN----EG 55 Query 60 VAILLTYGPNRDWLKNITAAGGGRMRRYGKTFGVANPRRLTKAEA 104 I LTYGP DW +N+ AAGG + + K + + NP L A Sbjct 56 FVIALTYGPKVDWYRNVQAAGGCTVFWHRKYYTLENPETLDTETA 100 Lambda K H 0.324 0.139 0.453 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 131523520100 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40