BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0526 Length=216 Score E Sequences producing significant alignments: (Bits) Value gi|308376431|ref|ZP_07668267.1| thioredoxin [Mycobacterium tuber... 436 1e-120 gi|15607666|ref|NP_215040.1| thioredoxin protein [Mycobacterium ... 435 2e-120 gi|339293573|gb|AEJ45684.1| thioredoxin protein [Mycobacterium t... 414 6e-114 gi|308231581|ref|ZP_07412967.2| thioredoxin [Mycobacterium tuber... 410 7e-113 gi|289752562|ref|ZP_06511940.1| thioredoxin protein [Mycobacteri... 389 2e-106 gi|240171274|ref|ZP_04749933.1| putative thioredoxin protein [My... 352 3e-95 gi|41410120|ref|NP_962956.1| hypothetical protein MAP4022 [Mycob... 333 7e-90 gi|118616430|ref|YP_904762.1| thioredoxin protein (thiol-disulfi... 333 1e-89 gi|15828298|ref|NP_302561.1| hypothetical protein ML2412 [Mycoba... 333 1e-89 gi|467053|gb|AAA17237.1| u2168c [Mycobacterium leprae] 333 1e-89 gi|183980893|ref|YP_001849184.1| thioredoxin protein (thiol-disu... 331 3e-89 gi|336460502|gb|EGO39397.1| thiol-disulfide isomerase-like thior... 329 2e-88 gi|296168237|ref|ZP_06850210.1| thioredoxin protein (thiol-disul... 324 5e-87 gi|254818922|ref|ZP_05223923.1| hypothetical protein MintA_03301... 323 1e-86 gi|342858965|ref|ZP_08715619.1| hypothetical protein MCOL_08813 ... 318 4e-85 gi|333989164|ref|YP_004521778.1| thioredoxin protein (thiol-disu... 305 3e-81 gi|108797672|ref|YP_637869.1| redoxin [Mycobacterium sp. MCS] >g... 303 1e-80 gi|118470613|ref|YP_885373.1| hypothetical protein MSMEG_0971 [M... 298 4e-79 gi|119855053|ref|YP_935658.1| redoxin domain-containing protein ... 295 4e-78 gi|120404672|ref|YP_954501.1| redoxin domain-containing protein ... 293 8e-78 gi|145220658|ref|YP_001131336.1| alkyl hydroperoxide reductase/ ... 293 2e-77 gi|315442392|ref|YP_004075271.1| peroxiredoxin [Mycobacterium sp... 292 2e-77 gi|120401881|ref|YP_951710.1| redoxin domain-containing protein ... 291 6e-77 gi|145225977|ref|YP_001136631.1| alkyl hydroperoxide reductase/ ... 290 8e-77 gi|145223399|ref|YP_001134077.1| alkyl hydroperoxide reductase/ ... 288 4e-76 gi|111019028|ref|YP_702000.1| thioredoxin [Rhodococcus jostii RH... 272 2e-71 gi|226361123|ref|YP_002778901.1| cytochrome c biogenesis protein... 270 1e-70 gi|169631055|ref|YP_001704704.1| thioredoxin [Mycobacterium absc... 269 2e-70 gi|54027132|ref|YP_121374.1| putative cytochrome c biogenesis pr... 268 5e-70 gi|325676516|ref|ZP_08156194.1| alkyl hydroperoxide reductase fa... 267 1e-69 gi|226349531|ref|YP_002776645.1| putative thiol-disulfide oxidor... 259 2e-67 gi|54027694|ref|YP_121935.1| putative thioredoxin [Nocardia farc... 257 9e-67 gi|226305157|ref|YP_002765115.1| cytochrome c biogenesis protein... 257 1e-66 gi|226349453|ref|YP_002776567.1| putative thiol-disulfide oxidor... 256 2e-66 gi|312138786|ref|YP_004006122.1| thioredoxin [Rhodococcus equi 1... 255 4e-66 gi|126437054|ref|YP_001072745.1| alkyl hydroperoxide reductase/ ... 253 9e-66 gi|312141074|ref|YP_004008410.1| cytochrome c assembly protein [... 252 3e-65 gi|77454701|ref|YP_345569.1| putative cytochrome c biogenesis pr... 245 3e-63 gi|33867173|ref|NP_898731.1| putative thioredoxin [Rhodococcus e... 244 5e-63 gi|333918039|ref|YP_004491620.1| putative thioredoxin [Amycolici... 241 5e-62 gi|120404217|ref|YP_954046.1| redoxin domain-containing protein ... 230 1e-58 gi|119855132|ref|YP_935737.1| redoxin domain-containing protein ... 225 3e-57 gi|145223456|ref|YP_001134134.1| alkyl hydroperoxide reductase/ ... 222 2e-56 gi|315441666|ref|YP_004074543.1| thiol-disulfide isomerase-like ... 220 1e-55 gi|289568451|ref|ZP_06448678.1| LOW QUALITY PROTEIN: thioredoxin... 217 8e-55 gi|302523852|ref|ZP_07276194.1| thiol-disulfide isomerase/thiore... 211 8e-53 gi|319951350|ref|ZP_08025176.1| thiol-disulfide isomerase/thiore... 197 1e-48 gi|134103360|ref|YP_001109021.1| thiol-disulfide isomerase/thior... 194 9e-48 gi|331699352|ref|YP_004335591.1| alkyl hydroperoxide reductase/ ... 193 2e-47 gi|256380700|ref|YP_003104360.1| alkyl hydroperoxide reductase/ ... 192 4e-47 >gi|308376431|ref|ZP_07668267.1| thioredoxin [Mycobacterium tuberculosis SUMu008] gi|308351122|gb|EFP39973.1| thioredoxin [Mycobacterium tuberculosis SUMu008] Length=222 Score = 436 bits (1120), Expect = 1e-120, Method: Compositional matrix adjust. Identities = 216/216 (100%), Positives = 216/216 (100%), Gaps = 0/216 (0%) Query 1 MQSRATRRSGALTMRRLVIAAAVSALLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPA 60 MQSRATRRSGALTMRRLVIAAAVSALLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPA Sbjct 7 MQSRATRRSGALTMRRLVIAAAVSALLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPA 66 Query 61 SRGRPGPLSGPELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAG 120 SRGRPGPLSGPELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAG Sbjct 67 SRGRPGPLSGPELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAG 126 Query 121 VSFLGIDVRDNNRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQH 180 VSFLGIDVRDNNRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQH Sbjct 127 VSFLGIDVRDNNRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQH 186 Query 181 RVAAVFLRELLAADLQPVVERVAEEEPSGRAPVGAQ 216 RVAAVFLRELLAADLQPVVERVAEEEPSGRAPVGAQ Sbjct 187 RVAAVFLRELLAADLQPVVERVAEEEPSGRAPVGAQ 222 >gi|15607666|ref|NP_215040.1| thioredoxin protein [Mycobacterium tuberculosis H37Rv] gi|15839920|ref|NP_334957.1| hypothetical protein MT0548 [Mycobacterium tuberculosis CDC1551] gi|31791708|ref|NP_854201.1| thioredoxin protein [Mycobacterium bovis AF2122/97] 51 more sequence titles Length=216 Score = 435 bits (1119), Expect = 2e-120, Method: Compositional matrix adjust. Identities = 216/216 (100%), Positives = 216/216 (100%), Gaps = 0/216 (0%) Query 1 MQSRATRRSGALTMRRLVIAAAVSALLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPA 60 MQSRATRRSGALTMRRLVIAAAVSALLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPA Sbjct 1 MQSRATRRSGALTMRRLVIAAAVSALLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPA 60 Query 61 SRGRPGPLSGPELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAG 120 SRGRPGPLSGPELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAG Sbjct 61 SRGRPGPLSGPELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAG 120 Query 121 VSFLGIDVRDNNRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQH 180 VSFLGIDVRDNNRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQH Sbjct 121 VSFLGIDVRDNNRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQH 180 Query 181 RVAAVFLRELLAADLQPVVERVAEEEPSGRAPVGAQ 216 RVAAVFLRELLAADLQPVVERVAEEEPSGRAPVGAQ Sbjct 181 RVAAVFLRELLAADLQPVVERVAEEEPSGRAPVGAQ 216 >gi|339293573|gb|AEJ45684.1| thioredoxin protein [Mycobacterium tuberculosis CCDC5079] gi|339297214|gb|AEJ49324.1| thioredoxin protein [Mycobacterium tuberculosis CCDC5180] Length=205 Score = 414 bits (1063), Expect = 6e-114, Method: Compositional matrix adjust. Identities = 204/205 (99%), Positives = 205/205 (100%), Gaps = 0/205 (0%) Query 12 LTMRRLVIAAAVSALLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGP 71 +TMRRLVIAAAVSALLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGP Sbjct 1 MTMRRLVIAAAVSALLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGP 60 Query 72 ELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDN 131 ELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDN Sbjct 61 ELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDN 120 Query 132 NRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELL 191 NRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELL Sbjct 121 NRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELL 180 Query 192 AADLQPVVERVAEEEPSGRAPVGAQ 216 AADLQPVVERVAEEEPSGRAPVGAQ Sbjct 181 AADLQPVVERVAEEEPSGRAPVGAQ 205 >gi|308231581|ref|ZP_07412967.2| thioredoxin [Mycobacterium tuberculosis SUMu001] gi|308369423|ref|ZP_07417717.2| thioredoxin [Mycobacterium tuberculosis SUMu002] gi|308370439|ref|ZP_07421489.2| thioredoxin [Mycobacterium tuberculosis SUMu003] 18 more sequence titles Length=203 Score = 410 bits (1054), Expect = 7e-113, Method: Compositional matrix adjust. Identities = 203/203 (100%), Positives = 203/203 (100%), Gaps = 0/203 (0%) Query 14 MRRLVIAAAVSALLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPEL 73 MRRLVIAAAVSALLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPEL Sbjct 1 MRRLVIAAAVSALLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPEL 60 Query 74 ADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNR 133 ADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNR Sbjct 61 ADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNR 120 Query 134 QAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAA 193 QAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAA Sbjct 121 QAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAA 180 Query 194 DLQPVVERVAEEEPSGRAPVGAQ 216 DLQPVVERVAEEEPSGRAPVGAQ Sbjct 181 DLQPVVERVAEEEPSGRAPVGAQ 203 >gi|289752562|ref|ZP_06511940.1| thioredoxin protein [Mycobacterium tuberculosis EAS054] gi|289693149|gb|EFD60578.1| thioredoxin protein [Mycobacterium tuberculosis EAS054] Length=191 Score = 389 bits (998), Expect = 2e-106, Method: Compositional matrix adjust. Identities = 190/191 (99%), Positives = 191/191 (100%), Gaps = 0/191 (0%) Query 26 LLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPELADPARSVSLDDF 85 +LLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPELADPARSVSLDDF Sbjct 1 MLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPELADPARSVSLDDF 60 Query 86 PGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQAPQDFINDRHV 145 PGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQAPQDFINDRHV Sbjct 61 PGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQAPQDFINDRHV 120 Query 146 TYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAADLQPVVERVAEE 205 TYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAADLQPVVERVAEE Sbjct 121 TYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAADLQPVVERVAEE 180 Query 206 EPSGRAPVGAQ 216 EPSGRAPVGAQ Sbjct 181 EPSGRAPVGAQ 191 >gi|240171274|ref|ZP_04749933.1| putative thioredoxin protein [Mycobacterium kansasii ATCC 12478] Length=198 Score = 352 bits (902), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 170/195 (88%), Positives = 184/195 (95%), Gaps = 1/195 (0%) Query 14 MRRLVIAAAVSALLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPEL 73 MRRL IA AV+A+L TGCSGRDAVAQGGTF+FVSPGGKTDIFYDPPASRGRPGPLSGP+L Sbjct 1 MRRLAIALAVAAML-TGCSGRDAVAQGGTFQFVSPGGKTDIFYDPPASRGRPGPLSGPDL 59 Query 74 ADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNR 133 DPAR++SLDD PGQVVVVNVWGQWCGPCRAE++QLQRVYDAT G+GVSFLGIDVRDN+R Sbjct 60 RDPARTLSLDDLPGQVVVVNVWGQWCGPCRAEITQLQRVYDATHGSGVSFLGIDVRDNSR 119 Query 134 QAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAA 193 A DF+NDRHVT+PSIYDPAMRTLIAFGGKYPT+VIPSTLVLDRQHRVAAVFLRELLA Sbjct 120 DAALDFVNDRHVTFPSIYDPAMRTLIAFGGKYPTTVIPSTLVLDRQHRVAAVFLRELLAE 179 Query 194 DLQPVVERVAEEEPS 208 DLQPVV+RVA EEPS Sbjct 180 DLQPVVQRVAAEEPS 194 >gi|41410120|ref|NP_962956.1| hypothetical protein MAP4022 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118465689|ref|YP_883748.1| hypothetical protein MAV_4619 [Mycobacterium avium 104] gi|254777057|ref|ZP_05218573.1| hypothetical protein MaviaA2_20649 [Mycobacterium avium subsp. avium ATCC 25291] gi|41398953|gb|AAS06572.1| hypothetical protein MAP_4022 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118166976|gb|ABK67873.1| conserved hypothetical protein [Mycobacterium avium 104] Length=197 Score = 333 bits (855), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 162/197 (83%), Positives = 181/197 (92%), Gaps = 3/197 (1%) Query 12 LTMRRLVIAAAVSALLLTGCS-GRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSG 70 ++ R L +A AV A LLTGCS G DAVAQGGTFEFVSPGGKTDI+YDPP+SRGRPGPLSG Sbjct 1 MSARVLAMAGAVLAGLLTGCSSGHDAVAQGGTFEFVSPGGKTDIYYDPPSSRGRPGPLSG 60 Query 71 PELADPARSVSLDD--FPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDV 128 P+LADPA ++SLDD F G+VVV+N+WGQWCGPCR+EVSQLQ+VYDATRGAG SFLGIDV Sbjct 61 PDLADPAHTLSLDDPIFAGRVVVINIWGQWCGPCRSEVSQLQQVYDATRGAGASFLGIDV 120 Query 129 RDNNRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLR 188 RDNNRQA DF+NDRHVT+PSIYDPAMRTLIAFGGKYPT+VIPSTLVLDRQHRVAAVFLR Sbjct 121 RDNNRQAALDFVNDRHVTFPSIYDPAMRTLIAFGGKYPTTVIPSTLVLDRQHRVAAVFLR 180 Query 189 ELLAADLQPVVERVAEE 205 ELLA DLQPVV+RVA++ Sbjct 181 ELLATDLQPVVQRVAQQ 197 >gi|118616430|ref|YP_904762.1| thioredoxin protein (thiol-disulfide interchange protein) [Mycobacterium ulcerans Agy99] gi|118568540|gb|ABL03291.1| thioredoxin protein (thiol-disulfide interchange protein) [Mycobacterium ulcerans Agy99] Length=205 Score = 333 bits (853), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 170/205 (83%), Positives = 186/205 (91%), Gaps = 0/205 (0%) Query 12 LTMRRLVIAAAVSALLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGP 71 +TMRRLVIAAAV A LLTGCSGRDAV QGGTFEFVSPGGKTDIFYDPPASRG PGPLSGP Sbjct 1 MTMRRLVIAAAVLAALLTGCSGRDAVVQGGTFEFVSPGGKTDIFYDPPASRGHPGPLSGP 60 Query 72 ELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDN 131 +L DP R++SLDDF G+VVVVNVWGQWCGPCRAE++QLQ+VYD TR AGVSFLGIDVRDN Sbjct 61 DLIDPDRTLSLDDFAGRVVVVNVWGQWCGPCRAEITQLQQVYDETRAAGVSFLGIDVRDN 120 Query 132 NRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELL 191 +R A QDF+ DRHVT+PSIYDPAMRTLIAFGGKYPT+VIPSTLVLDRQHRVAAVFLRELL Sbjct 121 SRAAAQDFVRDRHVTFPSIYDPAMRTLIAFGGKYPTTVIPSTLVLDRQHRVAAVFLRELL 180 Query 192 AADLQPVVERVAEEEPSGRAPVGAQ 216 A DLQPVV+R+A+E +G P G Q Sbjct 181 AEDLQPVVQRLAQEPAAGSTPPGPQ 205 >gi|15828298|ref|NP_302561.1| hypothetical protein ML2412 [Mycobacterium leprae TN] gi|221230775|ref|YP_002504191.1| hypothetical protein MLBr_02412 [Mycobacterium leprae Br4923] gi|13093991|emb|CAC31928.1| conserved hypothetical protein [Mycobacterium leprae] gi|219933882|emb|CAR72510.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=222 Score = 333 bits (853), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 168/214 (79%), Positives = 184/214 (86%), Gaps = 0/214 (0%) Query 1 MQSRATRRSGALTMRRLVIAAAVSALLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPA 60 MQS A RRSGA + RL A A+ A LL GCSGRDAV QGGTFEFVSP GKTDIFY+PPA Sbjct 7 MQSEAMRRSGATIIWRLANAGALLATLLAGCSGRDAVVQGGTFEFVSPDGKTDIFYEPPA 66 Query 61 SRGRPGPLSGPELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAG 120 SRGRPGPLSG +LADP R+V+LDDF G VVV+NVWGQWCGPCR EV+QLQ+VY+ATR +G Sbjct 67 SRGRPGPLSGLDLADPERTVALDDFTGNVVVINVWGQWCGPCRTEVTQLQQVYNATRDSG 126 Query 121 VSFLGIDVRDNNRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQH 180 VSFLGIDVRDNNRQA QDF+NDR VT+PSIYDPAMRTLIAFG KYPT+VIP TLVLDRQH Sbjct 127 VSFLGIDVRDNNRQAAQDFVNDRQVTFPSIYDPAMRTLIAFGDKYPTTVIPFTLVLDRQH 186 Query 181 RVAAVFLRELLAADLQPVVERVAEEEPSGRAPVG 214 RVAAVFLRELLA DLQPVV RVA E +G+ P G Sbjct 187 RVAAVFLRELLAGDLQPVVARVAHETVAGQLPRG 220 >gi|467053|gb|AAA17237.1| u2168c [Mycobacterium leprae] Length=216 Score = 333 bits (853), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 168/215 (79%), Positives = 184/215 (86%), Gaps = 0/215 (0%) Query 1 MQSRATRRSGALTMRRLVIAAAVSALLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPA 60 MQS A RRSGA + RL A A+ A LL GCSGRDAV QGGTFEFVSP GKTDIFY+PPA Sbjct 1 MQSEAMRRSGATIIWRLANAGALLATLLAGCSGRDAVVQGGTFEFVSPDGKTDIFYEPPA 60 Query 61 SRGRPGPLSGPELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAG 120 SRGRPGPLSG +LADP R+V+LDDF G VVV+NVWGQWCGPCR EV+QLQ+VY+ATR +G Sbjct 61 SRGRPGPLSGLDLADPERTVALDDFTGNVVVINVWGQWCGPCRTEVTQLQQVYNATRDSG 120 Query 121 VSFLGIDVRDNNRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQH 180 VSFLGIDVRDNNRQA QDF+NDR VT+PSIYDPAMRTLIAFG KYPT+VIP TLVLDRQH Sbjct 121 VSFLGIDVRDNNRQAAQDFVNDRQVTFPSIYDPAMRTLIAFGDKYPTTVIPFTLVLDRQH 180 Query 181 RVAAVFLRELLAADLQPVVERVAEEEPSGRAPVGA 215 RVAAVFLRELLA DLQPVV RVA E +G+ P G Sbjct 181 RVAAVFLRELLAGDLQPVVARVAHETVAGQLPRGT 215 >gi|183980893|ref|YP_001849184.1| thioredoxin protein (thiol-disulfide interchange protein) [Mycobacterium marinum M] gi|183174219|gb|ACC39329.1| thioredoxin protein (thiol-disulfide interchange protein) [Mycobacterium marinum M] Length=203 Score = 331 bits (849), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 170/203 (84%), Positives = 185/203 (92%), Gaps = 0/203 (0%) Query 14 MRRLVIAAAVSALLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPEL 73 MRRLVIAAAV A LLTGCSGRDAV QGGTFEFVSPGGKTDIFYDPPASRG PGPLSGP+L Sbjct 1 MRRLVIAAAVLAALLTGCSGRDAVVQGGTFEFVSPGGKTDIFYDPPASRGHPGPLSGPDL 60 Query 74 ADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNR 133 DP R++SLDDF G+VVVVNVWGQWCGPCRAE++QLQ+VYDATR AGVSFLGIDVRDN+R Sbjct 61 IDPDRTLSLDDFAGRVVVVNVWGQWCGPCRAEITQLQQVYDATRAAGVSFLGIDVRDNSR 120 Query 134 QAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAA 193 A QDF+ DRHVT+PSIYDPAMRTLIAFGGKYPT+VIPSTLVLDRQHRVAAVFLRELLA Sbjct 121 AAAQDFVRDRHVTFPSIYDPAMRTLIAFGGKYPTTVIPSTLVLDRQHRVAAVFLRELLAE 180 Query 194 DLQPVVERVAEEEPSGRAPVGAQ 216 DLQPVV+R+A+E +G P G Q Sbjct 181 DLQPVVQRLAQEPAAGSTPPGPQ 203 >gi|336460502|gb|EGO39397.1| thiol-disulfide isomerase-like thioredoxin [Mycobacterium avium subsp. paratuberculosis S397] Length=190 Score = 329 bits (844), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 160/190 (85%), Positives = 177/190 (94%), Gaps = 3/190 (1%) Query 19 IAAAVSALLLTGCS-GRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPELADPA 77 +A AV A LLTGCS G DAVAQGGTFEFVSPGGKTDI+YDPP+SRGRPGPLSGP+LADPA Sbjct 1 MAGAVLAGLLTGCSSGHDAVAQGGTFEFVSPGGKTDIYYDPPSSRGRPGPLSGPDLADPA 60 Query 78 RSVSLDD--FPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQA 135 ++SLDD F G+VVV+N+WGQWCGPCR+EVSQLQ+VYDATRGAG SFLGIDVRDNNRQA Sbjct 61 HTLSLDDPIFAGRVVVINIWGQWCGPCRSEVSQLQQVYDATRGAGASFLGIDVRDNNRQA 120 Query 136 PQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAADL 195 DF+NDRHVT+PSIYDPAMRTLIAFGGKYPT+VIPSTLVLDRQHRVAAVFLRELLA DL Sbjct 121 ALDFVNDRHVTFPSIYDPAMRTLIAFGGKYPTTVIPSTLVLDRQHRVAAVFLRELLATDL 180 Query 196 QPVVERVAEE 205 QPVV+RVA++ Sbjct 181 QPVVQRVAQQ 190 >gi|296168237|ref|ZP_06850210.1| thioredoxin protein (thiol-disulfide interchange protein) [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896809|gb|EFG76440.1| thioredoxin protein (thiol-disulfide interchange protein) [Mycobacterium parascrofulaceum ATCC BAA-614] Length=197 Score = 324 bits (830), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 158/196 (81%), Positives = 175/196 (90%), Gaps = 3/196 (1%) Query 14 MRRLVIAAAVSALLLTGCS-GRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPE 72 +RRL A V LL GCS GRDAVAQGGTFEFVSPGGKTDI+YDPP+SRGRPGPLSGP+ Sbjct 2 IRRLATAGVVVTTLLAGCSSGRDAVAQGGTFEFVSPGGKTDIYYDPPSSRGRPGPLSGPD 61 Query 73 LADPARSVSLDD--FPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRD 130 LADPA +SLDD F G+VVV+N+WGQWCGPCRAEV QLQ+VYDATR GVSFLGIDVRD Sbjct 62 LADPAHPLSLDDPIFAGRVVVINIWGQWCGPCRAEVGQLQQVYDATRDTGVSFLGIDVRD 121 Query 131 NNRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLREL 190 +NRQA DF+NDRHVT+PSIYDPAMRTLIAFGGKYPT+VIPSTLVLDRQHRVAAVFLREL Sbjct 122 SNRQAALDFVNDRHVTFPSIYDPAMRTLIAFGGKYPTTVIPSTLVLDRQHRVAAVFLREL 181 Query 191 LAADLQPVVERVAEEE 206 LA DLQPVV+++A E+ Sbjct 182 LAPDLQPVVQKLAREK 197 >gi|254818922|ref|ZP_05223923.1| hypothetical protein MintA_03301 [Mycobacterium intracellulare ATCC 13950] Length=194 Score = 323 bits (827), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 156/194 (81%), Positives = 173/194 (90%), Gaps = 2/194 (1%) Query 14 MRRLVIAAAVSALLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPEL 73 M +A VS LL SG DAVAQGGTFEFVSPGGKTDI YDPP+SRGRPGPL+GP+L Sbjct 1 MTGAALATLVSGLLAGCSSGHDAVAQGGTFEFVSPGGKTDISYDPPSSRGRPGPLAGPDL 60 Query 74 ADPARSVSLDD--FPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDN 131 ADPA ++SLDD F G+VVV+N+WGQWCGPCRAEV+QLQ+VYDATRGAGVSFLGIDVRDN Sbjct 61 ADPAHTLSLDDPIFAGRVVVINIWGQWCGPCRAEVTQLQQVYDATRGAGVSFLGIDVRDN 120 Query 132 NRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELL 191 NRQA DF+NDRHVT+PSIYDPAMRTLIAFGGKYPT+VIPSTLVLDRQHRVAAVFLRE+L Sbjct 121 NRQAALDFVNDRHVTFPSIYDPAMRTLIAFGGKYPTTVIPSTLVLDRQHRVAAVFLREML 180 Query 192 AADLQPVVERVAEE 205 A DLQPVV+R+A E Sbjct 181 AGDLQPVVQRLAHE 194 >gi|342858965|ref|ZP_08715619.1| hypothetical protein MCOL_08813 [Mycobacterium colombiense CECT 3035] gi|342133206|gb|EGT86409.1| hypothetical protein MCOL_08813 [Mycobacterium colombiense CECT 3035] Length=197 Score = 318 bits (814), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 158/197 (81%), Positives = 178/197 (91%), Gaps = 3/197 (1%) Query 12 LTMRRLVIAAAVSALLLTGCS-GRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSG 70 + + RL +A A A++LTGCS G DAVAQGGTFEFVSPGGKTDI+YDPP+SRGRPGPLSG Sbjct 1 MIVGRLAVAGAAVAMVLTGCSSGHDAVAQGGTFEFVSPGGKTDIYYDPPSSRGRPGPLSG 60 Query 71 PELADPARSVSLDD--FPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDV 128 P+L D A ++SLDD F G+VVV+N+WGQWCGPCRAEV+QLQ+VYDATRGAGVSFLGIDV Sbjct 61 PDLTDAAHTLSLDDPIFAGRVVVINIWGQWCGPCRAEVTQLQQVYDATRGAGVSFLGIDV 120 Query 129 RDNNRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLR 188 RDNNRQA DF+NDR VTYPSIYDPAMRTLIAFGGKYPT+VIPSTLVLDRQHRVAAVFLR Sbjct 121 RDNNRQAALDFVNDRQVTYPSIYDPAMRTLIAFGGKYPTTVIPSTLVLDRQHRVAAVFLR 180 Query 189 ELLAADLQPVVERVAEE 205 ELLA DL+PVV++VA E Sbjct 181 ELLATDLKPVVQKVAGE 197 >gi|333989164|ref|YP_004521778.1| thioredoxin protein (thiol-disulfide interchange protein) [Mycobacterium sp. JDM601] gi|333485132|gb|AEF34524.1| thioredoxin protein (thiol-disulfide interchange protein) [Mycobacterium sp. JDM601] Length=205 Score = 305 bits (781), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 144/203 (71%), Positives = 170/203 (84%), Gaps = 1/203 (0%) Query 14 MRRLVIAAAVSALLLTGCS-GRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPE 72 MR ++IA V+A L++GCS G DAV GGTFEFVSPGGKTDIFYDPPA RG+PGP+SGP+ Sbjct 1 MRAVLIAGVVAAALVSGCSTGDDAVTHGGTFEFVSPGGKTDIFYDPPADRGKPGPISGPD 60 Query 73 LADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNN 132 L DP+R++ +DDF G+VVVVNVWGQWCGPCR E+SQLQ+VYD TR GV+FLGIDVRD Sbjct 61 LMDPSRTIGVDDFAGKVVVVNVWGQWCGPCRTEISQLQQVYDETRSQGVAFLGIDVRDPE 120 Query 133 RQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLA 192 QAP+DFI DR V+YPSIYDPAMRT+IAFGG++P+SVIP+T+VLDRQHRVAAVFLRE+LA Sbjct 121 PQAPRDFITDRKVSYPSIYDPAMRTMIAFGGRFPSSVIPATMVLDRQHRVAAVFLREVLA 180 Query 193 ADLQPVVERVAEEEPSGRAPVGA 215 DLQPVV R+ E GA Sbjct 181 EDLQPVVARLVSESVESAESTGA 203 >gi|108797672|ref|YP_637869.1| redoxin [Mycobacterium sp. MCS] gi|119866759|ref|YP_936711.1| redoxin domain-containing protein [Mycobacterium sp. KMS] gi|126433296|ref|YP_001068987.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Mycobacterium sp. JLS] gi|108768091|gb|ABG06813.1| Redoxin [Mycobacterium sp. MCS] gi|119692848|gb|ABL89921.1| Redoxin domain protein [Mycobacterium sp. KMS] gi|126233096|gb|ABN96496.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Mycobacterium sp. JLS] Length=203 Score = 303 bits (775), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 144/191 (76%), Positives = 168/191 (88%), Gaps = 2/191 (1%) Query 14 MRRL-VIAAAVSALLLTGCS-GRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGP 71 MRR ++ A+V+ + L GCS G DAVAQGGTFEFV+PGGKTDIFYDPPA RGRPG LSGP Sbjct 1 MRRWWIVLASVAVVALAGCSTGDDAVAQGGTFEFVAPGGKTDIFYDPPADRGRPGALSGP 60 Query 72 ELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDN 131 +L DPA+++SLDDF GQVVV+NVWGQWC PCR E+ +LQ+VYDATR GV+FLGIDVRDN Sbjct 61 DLLDPAKTLSLDDFAGQVVVINVWGQWCAPCRTEIGELQQVYDATRAKGVAFLGIDVRDN 120 Query 132 NRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELL 191 NR+A DF+ DR +T+PSIYDP MRT+IAFGGKYPT+VIPST+VLDR+HRVAAVFLRELL Sbjct 121 NREAAVDFVRDRGITFPSIYDPPMRTMIAFGGKYPTTVIPSTVVLDREHRVAAVFLRELL 180 Query 192 AADLQPVVERV 202 A DLQPVVER+ Sbjct 181 AEDLQPVVERL 191 >gi|118470613|ref|YP_885373.1| hypothetical protein MSMEG_0971 [Mycobacterium smegmatis str. MC2 155] gi|118171900|gb|ABK72796.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=217 Score = 298 bits (763), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 147/209 (71%), Positives = 172/209 (83%), Gaps = 11/209 (5%) Query 1 MQSRATRRSGALTMRRLVIAAAVSALL---LTGCS-GRDAVAQGGTFEFVSPGGKTDIFY 56 MQS R G V AA+ A+L L GCS G DAVAQGGTFEFV+PGGKTDIFY Sbjct 1 MQSWVARVVG-------VTLAALFAVLTGALAGCSTGDDAVAQGGTFEFVAPGGKTDIFY 53 Query 57 DPPASRGRPGPLSGPELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDAT 116 DPP SRGRPG L+GP L DP++++SLDDF G+VVVVNVWGQWCGPCRAE++QLQ V++AT Sbjct 54 DPPQSRGRPGTLAGPLLTDPSKTISLDDFAGEVVVVNVWGQWCGPCRAEITQLQEVHNAT 113 Query 117 RGAGVSFLGIDVRDNNRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVL 176 + GV+FLGIDVRDNNR A DF+ DR+VT+PSIYDP MRT+IAFGGKYPT+VIPST+VL Sbjct 114 KDKGVAFLGIDVRDNNRDAAVDFVKDRNVTFPSIYDPPMRTMIAFGGKYPTTVIPSTVVL 173 Query 177 DRQHRVAAVFLRELLAADLQPVVERVAEE 205 DRQHRVAAVFLRELLA DL+P++ER+ E Sbjct 174 DRQHRVAAVFLRELLAEDLEPLIERLLAE 202 >gi|119855053|ref|YP_935658.1| redoxin domain-containing protein [Mycobacterium sp. KMS] gi|145225944|ref|YP_001136598.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Mycobacterium gilvum PYR-GCK] gi|119697771|gb|ABL94843.1| Redoxin domain protein [Mycobacterium sp. KMS] gi|145218407|gb|ABP47810.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Mycobacterium gilvum PYR-GCK] Length=223 Score = 295 bits (754), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 146/207 (71%), Positives = 170/207 (83%), Gaps = 6/207 (2%) Query 11 ALTMRRLVIAAAVSALL----LTGCS-GRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRP 65 +L +RR IAA +SA+L ++GCS G DAVAQGGTFEF+SPGG+ DIFYDPP SRGRP Sbjct 16 SLVIRR-GIAAGLSAVLFGAAVSGCSSGDDAVAQGGTFEFISPGGQVDIFYDPPQSRGRP 74 Query 66 GPLSGPELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLG 125 GP+ GP+L DP R++SLDDF QVVV+NVWGQWCGPCR E+ +LQRVYDATR GV+FLG Sbjct 75 GPIRGPDLMDPNRTLSLDDFAEQVVVINVWGQWCGPCRTEMPELQRVYDATRNEGVAFLG 134 Query 126 IDVRDNNRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAV 185 IDVRDNNRQA DFI DR VT+PSIYDP MRT+IA G +YPT+VIPST+VLDR HRVAAV Sbjct 135 IDVRDNNRQAAVDFIVDRKVTFPSIYDPPMRTMIALGARYPTTVIPSTIVLDRSHRVAAV 194 Query 186 FLRELLAADLQPVVERVAEEEPSGRAP 212 FLR LLA DL+PVV R+A E +G P Sbjct 195 FLRALLAEDLEPVVRRLAAETATGSGP 221 >gi|120404672|ref|YP_954501.1| redoxin domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119957490|gb|ABM14495.1| Redoxin domain protein [Mycobacterium vanbaalenii PYR-1] Length=218 Score = 293 bits (751), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 145/203 (72%), Positives = 168/203 (83%), Gaps = 6/203 (2%) Query 12 LTMRRLVIAAAVSALLL----TGCS-GRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPG 66 L +RR IAA +SA+L +GCS G DAVAQGGTFEF+SPGG+ DIFYDPP SRGRPG Sbjct 17 LVIRR-GIAAGLSAVLFGAAVSGCSSGDDAVAQGGTFEFISPGGQVDIFYDPPQSRGRPG 75 Query 67 PLSGPELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGI 126 P+ GP+L DP R++SLDDF QVVV+NVWGQWCGPCR E+ +LQRVYDATR GV+FLGI Sbjct 76 PIRGPDLMDPNRTLSLDDFAEQVVVINVWGQWCGPCRTEMPELQRVYDATRNEGVAFLGI 135 Query 127 DVRDNNRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVF 186 DVRDNNRQA DFI DR+VT+PSIYDP MRT+IA G +YPT+VIPST+VLDR HRVAAVF Sbjct 136 DVRDNNRQAAVDFIVDRNVTFPSIYDPPMRTMIALGARYPTTVIPSTIVLDRSHRVAAVF 195 Query 187 LRELLAADLQPVVERVAEEEPSG 209 LR LLA DL+PVV R+A E +G Sbjct 196 LRALLAEDLEPVVRRLAAETATG 218 >gi|145220658|ref|YP_001131336.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Mycobacterium gilvum PYR-GCK] gi|145213144|gb|ABP42548.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Mycobacterium gilvum PYR-GCK] Length=200 Score = 293 bits (749), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 136/178 (77%), Positives = 159/178 (90%), Gaps = 1/178 (0%) Query 30 GC-SGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPELADPARSVSLDDFPGQ 88 GC +G DAVAQGGTFEFV+PGG+TDIFYDPP RG PGPLSGP+L D R++SLDDF G+ Sbjct 23 GCATGSDAVAQGGTFEFVAPGGQTDIFYDPPQERGTPGPLSGPDLMDTDRTISLDDFAGK 82 Query 89 VVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQAPQDFINDRHVTYP 148 VVV+NVWGQWCGPCR E+++LQ+VYDATR GV+FLGIDVRDNN AP+DFI DR +T+P Sbjct 83 VVVINVWGQWCGPCRTEITELQKVYDATRDRGVAFLGIDVRDNNIDAPRDFIIDRAITFP 142 Query 149 SIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAADLQPVVERVAEEE 206 SIYDP MRT+IAFGG+YPT+VIPST+VLDR+HRVAAVFLRELLA DLQPVVER+A E+ Sbjct 143 SIYDPPMRTMIAFGGRYPTTVIPSTVVLDREHRVAAVFLRELLAQDLQPVVERLAAEQ 200 >gi|315442392|ref|YP_004075271.1| peroxiredoxin [Mycobacterium sp. Spyr1] gi|315260695|gb|ADT97436.1| Peroxiredoxin [Mycobacterium sp. Spyr1] Length=200 Score = 292 bits (748), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 136/178 (77%), Positives = 159/178 (90%), Gaps = 1/178 (0%) Query 30 GC-SGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPELADPARSVSLDDFPGQ 88 GC +G DAVAQGGTFEFV+PGG+TDIFYDPP RG PGPLSGP+L D R++SLDDF G+ Sbjct 23 GCATGSDAVAQGGTFEFVAPGGQTDIFYDPPQERGTPGPLSGPDLMDTDRTISLDDFAGK 82 Query 89 VVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQAPQDFINDRHVTYP 148 VVV+NVWGQWCGPCR E+++LQ+VYDATR GV+FLGIDVRDNN AP+DFI DR +T+P Sbjct 83 VVVINVWGQWCGPCRTEITELQKVYDATRDRGVAFLGIDVRDNNIDAPRDFIIDRAITFP 142 Query 149 SIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAADLQPVVERVAEEE 206 SIYDP MRT+IAFGG+YPT+VIPST+VLDR+HRVAAVFLRELLA DLQPVVER+A E+ Sbjct 143 SIYDPPMRTMIAFGGRYPTTVIPSTVVLDREHRVAAVFLRELLAQDLQPVVERLAAEQ 200 >gi|120401881|ref|YP_951710.1| redoxin domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119954699|gb|ABM11704.1| Redoxin domain protein [Mycobacterium vanbaalenii PYR-1] Length=200 Score = 291 bits (744), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 138/177 (78%), Positives = 157/177 (89%), Gaps = 1/177 (0%) Query 30 GC-SGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPELADPARSVSLDDFPGQ 88 GC +G DAVAQGGTFEFV+PGG+TDIFYDPP RG PGPLSGP+L D R++SLDDF G+ Sbjct 23 GCATGSDAVAQGGTFEFVAPGGQTDIFYDPPDKRGTPGPLSGPDLMDTDRTISLDDFAGK 82 Query 89 VVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQAPQDFINDRHVTYP 148 VVVVNVWGQWCGPCR E++QLQ+VY ATR GV+FLGIDVRDNN AP+DFI DR VT+P Sbjct 83 VVVVNVWGQWCGPCRTEITQLQQVYQATRDQGVAFLGIDVRDNNIDAPRDFIIDRGVTFP 142 Query 149 SIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAADLQPVVERVAEE 205 SIYDP MRT+IAFGG+YPT+VIPST+VLDR+HRVAAVFLRELLA DLQPVVER+A E Sbjct 143 SIYDPPMRTMIAFGGRYPTTVIPSTVVLDREHRVAAVFLRELLAEDLQPVVERLAAE 199 >gi|145225977|ref|YP_001136631.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Mycobacterium gilvum PYR-GCK] gi|145218440|gb|ABP47843.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Mycobacterium gilvum PYR-GCK] Length=240 Score = 290 bits (743), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 145/204 (72%), Positives = 167/204 (82%), Gaps = 6/204 (2%) Query 14 MRRLVIAAAVSALLL----TGCS-GRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPL 68 MRR IAA +SA+LL +GCS G DAVAQGGTFEFVSPGG+ DIFYDPP SRGRPGP+ Sbjct 36 MRR-GIAAGLSAVLLGAAVSGCSSGADAVAQGGTFEFVSPGGQVDIFYDPPLSRGRPGPI 94 Query 69 SGPELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDV 128 SGP+L DP R++SLDDF +VVV+NVWGQWCGPCR E+ +LQRVYDATR GV+FLGIDV Sbjct 95 SGPDLMDPDRTLSLDDFSEKVVVINVWGQWCGPCRTEMPELQRVYDATRNEGVAFLGIDV 154 Query 129 RDNNRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLR 188 RDNNR+A DFI DR VT+ SIYDP MRT+IA G +YPT+ IPST+VLDR HRVAAVFLR Sbjct 155 RDNNREAAVDFIVDRKVTFSSIYDPPMRTMIALGARYPTTAIPSTIVLDRSHRVAAVFLR 214 Query 189 ELLAADLQPVVERVAEEEPSGRAP 212 LLA DL+PVV R+A E +G P Sbjct 215 ALLAEDLEPVVRRLAAETATGSGP 238 >gi|145223399|ref|YP_001134077.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Mycobacterium gilvum PYR-GCK] gi|145215885|gb|ABP45289.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Mycobacterium gilvum PYR-GCK] Length=240 Score = 288 bits (736), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 142/206 (69%), Positives = 166/206 (81%), Gaps = 4/206 (1%) Query 11 ALTMRRLVIAAAVSALL---LTGCS-GRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPG 66 +L +RR ++A + LL ++GCS G DAVAQGGTFEFVSPGG+ DIFYDPP SRGRPG Sbjct 33 SLVVRRGIVAGLSAVLLGAAVSGCSSGDDAVAQGGTFEFVSPGGQVDIFYDPPQSRGRPG 92 Query 67 PLSGPELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGI 126 + GP+L P R++SLDDF QVVV+NVWGQWCGPCR E+ +LQRVYDATR GV+FLGI Sbjct 93 LIRGPDLMYPNRTLSLDDFAEQVVVINVWGQWCGPCRTEMPELQRVYDATRDEGVAFLGI 152 Query 127 DVRDNNRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVF 186 DVRDNNRQA DFI DR VT+PSIYDP MRT+IA G +YPT+VIPST+VLDR HRVAAVF Sbjct 153 DVRDNNRQAAVDFIVDRKVTFPSIYDPPMRTMIALGARYPTTVIPSTIVLDRSHRVAAVF 212 Query 187 LRELLAADLQPVVERVAEEEPSGRAP 212 LR LLA DL+PVV R+A E +G P Sbjct 213 LRALLAEDLEPVVRRLAAETTTGSGP 238 >gi|111019028|ref|YP_702000.1| thioredoxin [Rhodococcus jostii RHA1] gi|110818558|gb|ABG93842.1| possible thioredoxin [Rhodococcus jostii RHA1] Length=199 Score = 272 bits (696), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 127/190 (67%), Positives = 154/190 (82%), Gaps = 1/190 (0%) Query 17 LVIAAAVSALLLTGC-SGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPELAD 75 L+ +A+ LT C SG DAVAQGGTF+FVSPGG+T+IFYDPPA RG G +SGP+L Sbjct 9 LLAVICTAAVSLTACASGDDAVAQGGTFDFVSPGGQTEIFYDPPADRGTIGTVSGPDLMT 68 Query 76 PARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQA 135 ++ SLDDF GQVVV+NVWGQWCGPCR E + L++VY+ T+ GVSFLGI+VRDN + Sbjct 69 EGKTTSLDDFEGQVVVLNVWGQWCGPCRGEANDLEQVYEETKDQGVSFLGINVRDNQQDK 128 Query 136 PQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAADL 195 QDF+ D V+YPSIYDPAMRT+IA G YPTSVIP+T+VLDR+HRVAAVFL+ELLA DL Sbjct 129 AQDFVIDNKVSYPSIYDPAMRTMIALGQNYPTSVIPTTIVLDREHRVAAVFLKELLAEDL 188 Query 196 QPVVERVAEE 205 +PVVERVA+E Sbjct 189 KPVVERVAQE 198 >gi|226361123|ref|YP_002778901.1| cytochrome c biogenesis protein ResA [Rhodococcus opacus B4] gi|226239608|dbj|BAH49956.1| cytochrome c biogenesis protein ResA [Rhodococcus opacus B4] Length=199 Score = 270 bits (689), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 125/190 (66%), Positives = 154/190 (82%), Gaps = 1/190 (0%) Query 17 LVIAAAVSALLLTGC-SGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPELAD 75 L+ +A+ L+ C SG DAVAQGGTF+FVSPGG+T+IFYDPPA RG G +SGP+L Sbjct 9 LLAVICTAAVALSACASGDDAVAQGGTFDFVSPGGQTEIFYDPPADRGTIGTVSGPDLMT 68 Query 76 PARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQA 135 ++ SLDDF GQVVV+NVWGQWCGPCR E + L++VY+ T+ GVSFLGI+VRDN + Sbjct 69 EGKTTSLDDFEGQVVVLNVWGQWCGPCRGEANDLEQVYEETKDQGVSFLGINVRDNQQDK 128 Query 136 PQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAADL 195 QDF+ D V+YPSIYDPAMRT+IA G YPTSVIP+T+VLDR+HRVAAVFL+ELLA DL Sbjct 129 AQDFVIDNKVSYPSIYDPAMRTMIALGQNYPTSVIPTTIVLDREHRVAAVFLKELLAEDL 188 Query 196 QPVVERVAEE 205 +PVV+RVA+E Sbjct 189 KPVVDRVAQE 198 >gi|169631055|ref|YP_001704704.1| thioredoxin [Mycobacterium abscessus ATCC 19977] gi|169243022|emb|CAM64050.1| Possible thioredoxin [Mycobacterium abscessus] Length=203 Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 135/193 (70%), Positives = 154/193 (80%), Gaps = 1/193 (0%) Query 14 MRRLVIAAAVSALLLTGCS-GRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPE 72 MR LV A A AL +T CS G DAVA+GG F+FVSPGGKTDI YDPP SR PGP+SGP Sbjct 1 MRLLVAALAALALFITACSTGDDAVARGGQFQFVSPGGKTDILYDPPQSRQTPGPISGPS 60 Query 73 LADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNN 132 L DP +++SL DF G+VVV+NVWGQWCGPCR+E S L+ VY AT GV FLGI+VRDN Sbjct 61 LLDPTKTLSLSDFRGRVVVINVWGQWCGPCRSEFSALEDVYRATHAQGVEFLGINVRDNE 120 Query 133 RQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLA 192 QDF+ DR V YPSIYDP+MRTLIAFG K+PT IP+TLVLDRQHRVAAVFLRELLA Sbjct 121 ITKAQDFVTDRKVPYPSIYDPSMRTLIAFGKKFPTGAIPATLVLDRQHRVAAVFLRELLA 180 Query 193 ADLQPVVERVAEE 205 DL+PVVER+A+E Sbjct 181 QDLRPVVERLAQE 193 >gi|54027132|ref|YP_121374.1| putative cytochrome c biogenesis protein [Nocardia farcinica IFM 10152] gi|54018640|dbj|BAD60010.1| putative cytochrome c biogenesis protein [Nocardia farcinica IFM 10152] Length=212 Score = 268 bits (684), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 134/208 (65%), Positives = 157/208 (76%), Gaps = 9/208 (4%) Query 7 RRSGALTMRRLVIAAAVSALL--------LTGCS-GRDAVAQGGTFEFVSPGGKTDIFYD 57 RR + R V+ALL L GCS G DAVA GGTFEFVSPGGKTDIFYD Sbjct 2 RRPASFPAHRSAPVRVVAALLACVALVAGLAGCSTGTDAVATGGTFEFVSPGGKTDIFYD 61 Query 58 PPASRGRPGPLSGPELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATR 117 PPA+RG G LSGP+L +++S+ D PGQVVV+N+WGQWCGPCRAE L+RVY+ATR Sbjct 62 PPAARGTIGELSGPDLMTDGKTISVADHPGQVVVLNIWGQWCGPCRAEAPALERVYEATR 121 Query 118 GAGVSFLGIDVRDNNRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLD 177 +GV FLGI+VRD + +DF+ D V YPSIYDPAMRTL+A GG +PTSVIP+TLVLD Sbjct 122 DSGVVFLGINVRDFQQDKARDFVTDNKVGYPSIYDPAMRTLLALGGNFPTSVIPTTLVLD 181 Query 178 RQHRVAAVFLRELLAADLQPVVERVAEE 205 R+HRVAAVFLR LLA DLQPVV+R+AEE Sbjct 182 REHRVAAVFLRTLLAEDLQPVVQRIAEE 209 >gi|325676516|ref|ZP_08156194.1| alkyl hydroperoxide reductase family protein [Rhodococcus equi ATCC 33707] gi|325552694|gb|EGD22378.1| alkyl hydroperoxide reductase family protein [Rhodococcus equi ATCC 33707] Length=202 Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 132/191 (70%), Positives = 153/191 (81%), Gaps = 2/191 (1%) Query 16 RLVIAAAVSALLLTGC-SGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPELA 74 R + AA + A+LL+GC +G DAVAQGGTF+FV+PGG+ DIFYDPP SRG G L+GPEL Sbjct 13 RAIAAAGLVAMLLSGCATGTDAVAQGGTFDFVAPGGQMDIFYDPPESRGTIGNLAGPELI 72 Query 75 DPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQ 134 + V + DFPGQVVV+N+WGQWC PCRAE L+RVY ATRG+GV FLGI+VRD R Sbjct 73 TD-QQVGVADFPGQVVVINLWGQWCAPCRAEADDLERVYQATRGSGVQFLGINVRDPQRD 131 Query 135 APQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAAD 194 QDF D +TYPSIYDP MR+L+A GGKYPTSVIPST+VLDRQHRVAAVFLRELL D Sbjct 132 KAQDFAVDFGLTYPSIYDPPMRSLLALGGKYPTSVIPSTIVLDRQHRVAAVFLRELLDVD 191 Query 195 LQPVVERVAEE 205 LQPVVER+A E Sbjct 192 LQPVVERIAAE 202 >gi|226349531|ref|YP_002776645.1| putative thiol-disulfide oxidoreductase [Rhodococcus opacus B4] gi|226245446|dbj|BAH55793.1| putative thiol-disulfide oxidoreductase [Rhodococcus opacus B4] Length=218 Score = 259 bits (662), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 126/190 (67%), Positives = 151/190 (80%), Gaps = 2/190 (1%) Query 18 VIAAAVSALL-LTGC-SGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPELAD 75 V+A ++A+L GC SG DAVAQGGTF+FV+PGG+TDI YDPP SRG+ GPLSGP+L Sbjct 28 VLAVGMAAVLGAAGCASGSDAVAQGGTFDFVAPGGQTDILYDPPESRGKVGPLSGPDLMA 87 Query 76 PARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQA 135 R+VSL D+ GQVVV+N+WGQWC PCR+E L++ Y+AT+ GV FLGI+VRD R Sbjct 88 DGRAVSLSDYAGQVVVINLWGQWCAPCRSEADDLEQAYEATKDLGVQFLGINVRDPQRDK 147 Query 136 PQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAADL 195 QDF+ D ++YPSIYDP MRTLIA GG YPTSVIPSTLVLDRQHRVAAVFLR LLA DL Sbjct 148 AQDFVIDNRMSYPSIYDPPMRTLIALGGSYPTSVIPSTLVLDRQHRVAAVFLRALLAEDL 207 Query 196 QPVVERVAEE 205 PV+ER+A + Sbjct 208 LPVIERLAAQ 217 >gi|54027694|ref|YP_121935.1| putative thioredoxin [Nocardia farcinica IFM 10152] gi|54019202|dbj|BAD60571.1| putative thioredoxin [Nocardia farcinica IFM 10152] Length=220 Score = 257 bits (656), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 124/204 (61%), Positives = 156/204 (77%), Gaps = 2/204 (0%) Query 4 RATRRSGALTMRRLVIAAAVSALLLTGCSGRDAVAQGG-TFEFVSPGGKTDIFYDPPASR 62 RA R L ++ AAV+A++ + SG D+VA GG TF+FVSPGG+TDIFYDPP SR Sbjct 18 RARHRQLRLLAAMALVIAAVTAVI-SCASGSDSVATGGGTFDFVSPGGQTDIFYDPPESR 76 Query 63 GRPGPLSGPELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVS 122 G+ G L+GP+L ++VS+ D+ GQVVV+N+WGQWCGPCRAE L+R Y AT+ +GV Sbjct 77 GKIGVLAGPDLMAEDKTVSVSDYTGQVVVINLWGQWCGPCRAEADDLERAYAATKASGVQ 136 Query 123 FLGIDVRDNNRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRV 182 F+GI+VRD R QDF+ D V+YPSIYDP MRTL+A GG YPTSVIPSTL+LDR+ RV Sbjct 137 FVGINVRDQQRDKAQDFVIDNKVSYPSIYDPPMRTLVALGGSYPTSVIPSTLILDRKQRV 196 Query 183 AAVFLRELLAADLQPVVERVAEEE 206 AAVFLR LL +DLQPV+ER+A E+ Sbjct 197 AAVFLRALLTSDLQPVIERLAAEQ 220 >gi|226305157|ref|YP_002765115.1| cytochrome c biogenesis protein ResA [Rhodococcus erythropolis PR4] gi|229490738|ref|ZP_04384576.1| thioredoxin protein [Rhodococcus erythropolis SK121] gi|226184272|dbj|BAH32376.1| cytochrome c biogenesis protein ResA [Rhodococcus erythropolis PR4] gi|229322558|gb|EEN88341.1| thioredoxin protein [Rhodococcus erythropolis SK121] Length=201 Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 117/175 (67%), Positives = 145/175 (83%), Gaps = 0/175 (0%) Query 32 SGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPELADPARSVSLDDFPGQVVV 91 +G DAVAQGGTF+FVSPGG+T IFYDPP+ RG G LSGP+L + + V +DDF G+VVV Sbjct 25 TGDDAVAQGGTFDFVSPGGQTKIFYDPPSDRGTIGKLSGPDLMNEGQKVGVDDFEGKVVV 84 Query 92 VNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQAPQDFINDRHVTYPSIY 151 +NVWGQWCGPCRAE L++VY+ T+ +GV FLGI+VRD+ + QDF+ D V+YPSIY Sbjct 85 LNVWGQWCGPCRAEADDLEQVYEQTKDSGVQFLGINVRDDTKNKAQDFVVDNKVSYPSIY 144 Query 152 DPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAADLQPVVERVAEEE 206 DP+MR+LIA G YPTSVIP+T+VLDRQHRVAAVFL+ELLA DL PVV+RVA+E+ Sbjct 145 DPSMRSLIALGDGYPTSVIPTTIVLDRQHRVAAVFLQELLAEDLLPVVQRVAQED 199 >gi|226349453|ref|YP_002776567.1| putative thiol-disulfide oxidoreductase [Rhodococcus opacus B4] gi|226245368|dbj|BAH55715.1| putative thiol-disulfide oxidoreductase [Rhodococcus opacus B4] Length=208 Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 130/195 (67%), Positives = 148/195 (76%), Gaps = 4/195 (2%) Query 14 MRRLVIAAAVSALLLTG---CSGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSG 70 +RR V+ AAV A LLT +G DAVAQGGTF+FV+PGG+TDIFYDPP +RG G L+G Sbjct 10 LRRRVVLAAVCAALLTAPACATGADAVAQGGTFDFVAPGGQTDIFYDPPQARGSIGALTG 69 Query 71 PELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRD 130 P+L R VSL D+ G VVV+N+WGQWC PCR+E L+R Y AT GV FLGI+VRD Sbjct 70 PDLMT-DRPVSLADYAGHVVVINLWGQWCAPCRSEADDLERAYTATADRGVRFLGINVRD 128 Query 131 NNRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLREL 190 R QDF+ D VTYPSIYDP MRTL+A GG YPTSVIPSTLVLDRQHRVAAVFLR L Sbjct 129 PGRDKAQDFVVDNAVTYPSIYDPPMRTLLALGGSYPTSVIPSTLVLDRQHRVAAVFLRAL 188 Query 191 LAADLQPVVERVAEE 205 L DLQPV+ERVA E Sbjct 189 LTEDLQPVIERVAAE 203 >gi|312138786|ref|YP_004006122.1| thioredoxin [Rhodococcus equi 103S] gi|311888125|emb|CBH47437.1| putative secreted thioredoxin [Rhodococcus equi 103S] Length=199 Score = 255 bits (651), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 126/178 (71%), Positives = 144/178 (81%), Gaps = 2/178 (1%) Query 29 TGC-SGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPELADPARSVSLDDFPG 87 +GC +G DAVAQGGTF+FV+PGG+ DIFYDPP SRG G L+GPEL + V + DFPG Sbjct 23 SGCATGTDAVAQGGTFDFVAPGGQMDIFYDPPESRGTIGNLAGPELIT-DQQVGVADFPG 81 Query 88 QVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQAPQDFINDRHVTY 147 QVVV+N+WGQWC PCRAE L+RVY ATRG+GV FLGI+VRD R QDF D +TY Sbjct 82 QVVVINLWGQWCAPCRAEADDLERVYQATRGSGVQFLGINVRDPQRDKAQDFAVDFGLTY 141 Query 148 PSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAADLQPVVERVAEE 205 PSIYDP MR+L+A GGKYPTSVIPST+VLDRQHRVAAVFLRELL DLQPVVER+A E Sbjct 142 PSIYDPPMRSLLALGGKYPTSVIPSTIVLDRQHRVAAVFLRELLDVDLQPVVERIAAE 199 >gi|126437054|ref|YP_001072745.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Mycobacterium sp. JLS] gi|126236854|gb|ABO00255.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Mycobacterium sp. JLS] Length=195 Score = 253 bits (647), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 119/186 (64%), Positives = 150/186 (81%), Gaps = 3/186 (1%) Query 21 AAVSALLLTGC-SGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPELADPARS 79 A++AL++ GC +GRDAVAQGGTFEFVSPGGKTD+FYDPP +RG G L+GP L D R+ Sbjct 11 CAIAALIVVGCATGRDAVAQGGTFEFVSPGGKTDLFYDPPQTRGSIGDLTGPALMDD-RA 69 Query 80 VSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQAPQDF 139 + L DF +VVV+N+WG WC PCR E +L++V++ T GV+FLGIDVRD R A DF Sbjct 70 IHLSDFAAKVVVINIWGSWCAPCRTETPELEKVFEETEALGVAFLGIDVRDG-RSAAMDF 128 Query 140 INDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAADLQPVV 199 + DR+V+YPSI+DPAMR+LIA G YPTSV+P+TLVLDR+HRVAA+FLR LLA DL+PVV Sbjct 129 VTDRNVSYPSIFDPAMRSLIALGRGYPTSVVPTTLVLDRKHRVAAIFLRALLAEDLRPVV 188 Query 200 ERVAEE 205 +R+A E Sbjct 189 QRIAAE 194 >gi|312141074|ref|YP_004008410.1| cytochrome c assembly protein [Rhodococcus equi 103S] gi|325674115|ref|ZP_08153805.1| alkyl hydroperoxide reductase family protein [Rhodococcus equi ATCC 33707] gi|311890413|emb|CBH49731.1| cytochrome c assembly protein [Rhodococcus equi 103S] gi|325555380|gb|EGD25052.1| alkyl hydroperoxide reductase family protein [Rhodococcus equi ATCC 33707] Length=204 Score = 252 bits (643), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 118/190 (63%), Positives = 146/190 (77%), Gaps = 6/190 (3%) Query 17 LVIAAAVSALLLTGC-SGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPELAD 75 LV+AA V+ GC +G DAVAQGGTF FVSPGGKT++FYDPP+ RG G +SG +L Sbjct 15 LVVAATVA-----GCATGDDAVAQGGTFVFVSPGGKTELFYDPPSERGAVGKVSGEDLMT 69 Query 76 PARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQA 135 ++ SL D+ GQVVV+NVWGQWCGPCR E L++VY+ T+ GV FLGI+VRD+ + Sbjct 70 DGKTTSLTDYEGQVVVLNVWGQWCGPCRGEADDLEKVYENTKDMGVQFLGINVRDHTKDK 129 Query 136 PQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAADL 195 QDF+ + V YPSIYDP MRTL+ G YPTSVIP+T+VLDR+HRVAAVFL+ELL DL Sbjct 130 AQDFVVNNKVGYPSIYDPEMRTLLTLGKNYPTSVIPTTIVLDREHRVAAVFLKELLVEDL 189 Query 196 QPVVERVAEE 205 QPVVER+A+E Sbjct 190 QPVVERIAQE 199 >gi|77454701|ref|YP_345569.1| putative cytochrome c biogenesis protein ResA [Rhodococcus erythropolis PR4] gi|229493260|ref|ZP_04387051.1| redoxin domain protein [Rhodococcus erythropolis SK121] gi|77019701|dbj|BAE46077.1| putative cytochrome c biogenesis protein ResA [Rhodococcus erythropolis PR4] gi|229319762|gb|EEN85592.1| redoxin domain protein [Rhodococcus erythropolis SK121] Length=214 Score = 245 bits (626), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 119/194 (62%), Positives = 145/194 (75%), Gaps = 3/194 (1%) Query 15 RRLVIAAAVSALLL--TGC-SGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGP 71 R L + A ++A+++ +GC +G DAVA G F+FVSPGG+TDI YDPP SR G L+GP Sbjct 20 RILPLVAILTAIVVAASGCATGTDAVASGANFDFVSPGGQTDILYDPPESRNMIGVLAGP 79 Query 72 ELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDN 131 +L +SL D+ GQVVV+N+WGQWC PCR+E L+R Y+AT GV FLGI+VRD Sbjct 80 DLMADGSDISLTDYAGQVVVINLWGQWCAPCRSEADDLERAYEATESLGVQFLGINVRDP 139 Query 132 NRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELL 191 R QDF+ D +V+YPSIYDP+MRTL A GG YPTSVIPSTLVLDR+ RVAAVFLR LL Sbjct 140 QRDKAQDFVVDNNVSYPSIYDPSMRTLTALGGNYPTSVIPSTLVLDRRQRVAAVFLRALL 199 Query 192 AADLQPVVERVAEE 205 DLQPV+ERVA E Sbjct 200 TEDLQPVIERVAAE 213 >gi|33867173|ref|NP_898731.1| putative thioredoxin [Rhodococcus erythropolis] gi|33669007|gb|AAP74001.1| putative thioredoxin [Rhodococcus erythropolis] Length=214 Score = 244 bits (623), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 119/194 (62%), Positives = 144/194 (75%), Gaps = 3/194 (1%) Query 15 RRLVIAAAVSALLL--TGC-SGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGP 71 R L + A ++A+++ +GC +G DAVA G F+FVSPGG+TDI YDPP SR G L+GP Sbjct 20 RILPLVAILTAIVVAASGCATGTDAVASGANFDFVSPGGQTDILYDPPESRNMIGVLAGP 79 Query 72 ELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDN 131 +L +SL D+ GQVVV+N+WGQWC PCR+E L+R Y+AT GV FLGI+VRD Sbjct 80 DLMADGSDISLTDYAGQVVVINLWGQWCAPCRSEADDLERAYEATESLGVQFLGINVRDP 139 Query 132 NRQAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELL 191 R QDF+ D V+YPSIYDP+MRTL A GG YPTSVIPSTLVLDR+ RVAAVFLR LL Sbjct 140 QRDKAQDFVVDNSVSYPSIYDPSMRTLTALGGNYPTSVIPSTLVLDRRQRVAAVFLRALL 199 Query 192 AADLQPVVERVAEE 205 DLQPV+ERVA E Sbjct 200 TEDLQPVIERVAAE 213 >gi|333918039|ref|YP_004491620.1| putative thioredoxin [Amycolicicoccus subflavus DQS3-9A1] gi|333480260|gb|AEF38820.1| Possible thioredoxin [Amycolicicoccus subflavus DQS3-9A1] Length=201 Score = 241 bits (615), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 116/175 (67%), Positives = 135/175 (78%), Gaps = 1/175 (0%) Query 32 SGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPELADPARSVSLDDFPGQVVV 91 +G DAV QGGTF FVSPGG+T+I YDPP SRG G L GP LADP ++ L+ F GQVVV Sbjct 28 AGTDAVVQGGTFNFVSPGGQTEILYDPPESRGTIGMLMGPSLADPDETIELEGFAGQVVV 87 Query 92 VNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQAPQDFINDRHVTYPSIY 151 +NVWGQWC PCR E+ +LQ VYD T+ GV FLGI+VRD QDF+ D +T+PSIY Sbjct 88 LNVWGQWCAPCRTEMPELQEVYDETKELGVQFLGINVRDPQIDKAQDFVTDFGLTFPSIY 147 Query 152 DPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAADLQPVVERVAEEE 206 DP+MRTLIA G PTSV+P T VLDR+HRVAAVFLR+LL DLQPVVERVA+EE Sbjct 148 DPSMRTLIAMRG-IPTSVVPMTFVLDREHRVAAVFLRDLLVEDLQPVVERVAQEE 201 >gi|120404217|ref|YP_954046.1| redoxin domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119957035|gb|ABM14040.1| Redoxin domain protein [Mycobacterium vanbaalenii PYR-1] Length=198 Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 113/180 (63%), Positives = 138/180 (77%), Gaps = 7/180 (3%) Query 29 TGCS-GRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPEL--ADPARSVSLDDF 85 TGC+ G DAVAQGGTF+FVSPGGKT IFYDPP++RG G LSGP+L +P R L DF Sbjct 22 TGCTTGEDAVAQGGTFDFVSPGGKTAIFYDPPSTRGTIGNLSGPDLFTDEPIR---LSDF 78 Query 86 PGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQAPQDFINDRHV 145 G+VV++NVWG WC PCR E +L+ VY R GV FLGIDVRDN R +DF+ DR+V Sbjct 79 TGKVVLINVWGSWCAPCRTETPELETVYGEYRDRGVQFLGIDVRDN-RDTARDFVTDRNV 137 Query 146 TYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAADLQPVVERVAEE 205 YPSI+DPAMR+LI G YPTSV+P+T+VLDRQHRVAAV+L LLA DL+P+++R+ E Sbjct 138 QYPSIFDPAMRSLITLGRSYPTSVVPTTMVLDRQHRVAAVYLMALLAEDLRPLLDRLTTE 197 >gi|119855132|ref|YP_935737.1| redoxin domain-containing protein [Mycobacterium sp. KMS] gi|119697850|gb|ABL94922.1| Redoxin domain protein [Mycobacterium sp. KMS] Length=188 Score = 225 bits (574), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 109/177 (62%), Positives = 135/177 (77%), Gaps = 3/177 (1%) Query 30 GC-SGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPELADPARSVSLDDFPGQ 88 GC SG DAVAQGGTF+FVSPGG+T IFYDPP++RG G L+GP+L + L DF G+ Sbjct 13 GCTSGEDAVAQGGTFDFVSPGGETAIFYDPPSTRGTIGNLNGPDLF-TDEPIRLSDFAGK 71 Query 89 VVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQAPQDFINDRHVTYP 148 VV++NVWG WC PCR E +L+ VY R GV FLGIDVRDN R +DF+ DR+V YP Sbjct 72 VVLINVWGSWCAPCRTETPELETVYAEYRDRGVQFLGIDVRDN-RDTARDFVTDRNVGYP 130 Query 149 SIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAADLQPVVERVAEE 205 SI+DPAMR+LI G YPT+V+P+T+VLDRQHRVAAVFL LLA DL+P+++R+ E Sbjct 131 SIFDPAMRSLITLGRSYPTNVVPTTMVLDRQHRVAAVFLMALLAEDLRPLLDRLTTE 187 >gi|145223456|ref|YP_001134134.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Mycobacterium gilvum PYR-GCK] gi|145215942|gb|ABP45346.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Mycobacterium gilvum PYR-GCK] Length=200 Score = 222 bits (566), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 110/174 (64%), Positives = 133/174 (77%), Gaps = 7/174 (4%) Query 29 TGCS-GRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPEL--ADPARSVSLDDF 85 TGC+ G DAV+QGGTF+F SPGGKT IFYDPP+SRG G LSGP+L DP R L D+ Sbjct 22 TGCTTGDDAVSQGGTFDFASPGGKTAIFYDPPSSRGTIGDLSGPDLFTDDPIR---LSDY 78 Query 86 PGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQAPQDFINDRHV 145 G+VV++NVWG WC PCR E +L+ VY R GV FLGIDVRDN R +DF+ DR+V Sbjct 79 TGKVVLINVWGSWCAPCRTETPELETVYAEYRDRGVQFLGIDVRDN-RDTARDFVTDRNV 137 Query 146 TYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAADLQPVV 199 YPSI+DPAMR+LI G YPTSV+P+T+VLDRQHRVAAV+L LLA DL+P++ Sbjct 138 EYPSIFDPAMRSLITLGRTYPTSVVPTTMVLDRQHRVAAVYLMALLAEDLRPLL 191 >gi|315441666|ref|YP_004074543.1| thiol-disulfide isomerase-like thioredoxin [Mycobacterium sp. Spyr1] gi|315265321|gb|ADU02062.1| thiol-disulfide isomerase-like thioredoxin [Mycobacterium sp. Spyr1] Length=197 Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 106/177 (60%), Positives = 134/177 (76%), Gaps = 3/177 (1%) Query 30 GCS-GRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPELADPARSVSLDDFPGQ 88 GC+ G AVAQGGTF+FVSPGG+T IFYDPP++RG G L+GP+L A + L DF G+ Sbjct 22 GCTTGEGAVAQGGTFDFVSPGGQTAIFYDPPSTRGTIGDLTGPDLFTDA-PIRLSDFTGK 80 Query 89 VVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQAPQDFINDRHVTYP 148 VV++NVWG WC PCR E +L+ VY R GV FLGIDVRDN R +DF+ DR V YP Sbjct 81 VVLINVWGSWCAPCRTETPELETVYAEYRDRGVQFLGIDVRDN-RDTARDFVTDRDVQYP 139 Query 149 SIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAADLQPVVERVAEE 205 SI+DP++R+LI G YPTSV+P+T+VLDRQHRVAAV+L LLA DL+P+++R+ E Sbjct 140 SIFDPSLRSLITLGRTYPTSVVPTTMVLDRQHRVAAVYLMALLAEDLRPLLDRLTTE 196 >gi|289568451|ref|ZP_06448678.1| LOW QUALITY PROTEIN: thioredoxin [Mycobacterium tuberculosis T17] gi|289542205|gb|EFD45853.1| LOW QUALITY PROTEIN: thioredoxin [Mycobacterium tuberculosis T17] Length=107 Score = 217 bits (553), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 107/107 (100%), Positives = 107/107 (100%), Gaps = 0/107 (0%) Query 1 MQSRATRRSGALTMRRLVIAAAVSALLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPA 60 MQSRATRRSGALTMRRLVIAAAVSALLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPA Sbjct 1 MQSRATRRSGALTMRRLVIAAAVSALLLTGCSGRDAVAQGGTFEFVSPGGKTDIFYDPPA 60 Query 61 SRGRPGPLSGPELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVS 107 SRGRPGPLSGPELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVS Sbjct 61 SRGRPGPLSGPELADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVS 107 >gi|302523852|ref|ZP_07276194.1| thiol-disulfide isomerase/thioredoxin [Streptomyces sp. AA4] gi|302432747|gb|EFL04563.1| thiol-disulfide isomerase/thioredoxin [Streptomyces sp. AA4] Length=193 Score = 211 bits (536), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 103/193 (54%), Positives = 138/193 (72%), Gaps = 3/193 (1%) Query 15 RRLVIAAAVSALLLTGCS-GRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPEL 73 RRL+ +AL++TGCS G+DAV GGTF FVSPGGK DI Y P R + L+G +L Sbjct 3 RRLLGVLTAAALVVTGCSTGKDAVVSGGTFTFVSPGGKVDITY-PVNERQKAPTLAGDDL 61 Query 74 ADPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNR 133 + +S++DFPG+ +V+N+WGQWCGPCRAE +L+ G +G+DVRD R Sbjct 62 MHEGKQLSIEDFPGKALVINLWGQWCGPCRAEAPELETASKQIAPLGAQVIGLDVRDPAR 121 Query 134 QAPQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAA 193 Q QDF+ DR +TYPSI+DP+ R L+ G YP ++IPSTLVLD+QHRVAAVFLR++LA+ Sbjct 122 QVAQDFVRDRGLTYPSIWDPSGRVLLQLAG-YPRNIIPSTLVLDKQHRVAAVFLRQVLAS 180 Query 194 DLQPVVERVAEEE 206 DL PVV+R++ E+ Sbjct 181 DLVPVVQRLSAEK 193 >gi|319951350|ref|ZP_08025176.1| thiol-disulfide isomerase/thioredoxin [Dietzia cinnamea P4] gi|319434981|gb|EFV90275.1| thiol-disulfide isomerase/thioredoxin [Dietzia cinnamea P4] Length=206 Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 100/193 (52%), Positives = 133/193 (69%), Gaps = 4/193 (2%) Query 16 RLVIAAAVSALLLTGC-SGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPELA 74 RL A L+L+GC SG DAVAQGGTFEFVSP G+ +I Y P R L+GP+L Sbjct 12 RLWAALCAGTLVLSGCGSGTDAVAQGGTFEFVSPDGQLEIHY-PEEERKPIAELAGPDLL 70 Query 75 DPARSVSLDDFPGQVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQ 134 DP +++ L D+ G+VV++N WGQWCGPCR EV LQR+++ G + LGI+VRD NR Sbjct 71 DPDQTIGLADYKGEVVILNTWGQWCGPCRTEVDDLQRLHEEFESQGATVLGINVRDPNRD 130 Query 135 APQDFINDRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAAD 194 P DF+ D VTYPSI+DP + A G +PTS++P+TL+LDRQHRVA+V+L E+ Sbjct 131 KPVDFVRDNGVTYPSIWDPTNAAIGALRG-FPTSIVPTTLLLDRQHRVASVYLAEITDYQ 189 Query 195 LQPVV-ERVAEEE 206 L+ V+ E VA++E Sbjct 190 LRDVIAELVADDE 202 >gi|134103360|ref|YP_001109021.1| thiol-disulfide isomerase/thioredoxin [Saccharopolyspora erythraea NRRL 2338] gi|291004421|ref|ZP_06562394.1| thiol-disulfide isomerase/thioredoxin [Saccharopolyspora erythraea NRRL 2338] gi|133915983|emb|CAM06096.1| thiol-disulfide isomerase/thioredoxin [Saccharopolyspora erythraea NRRL 2338] Length=191 Score = 194 bits (492), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 98/178 (56%), Positives = 123/178 (70%), Gaps = 5/178 (2%) Query 30 GCS--GRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPELADPARSVSLDDFPG 87 GC+ G DAV +GG F FVSPGG+T IFY PP RGR L G L + + + + DF G Sbjct 16 GCATAGEDAVEKGGEFTFVSPGGQTRIFY-PPQERGRLTGLHGENLLEKGKDLGIADFQG 74 Query 88 QVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQAPQDFINDRHVTY 147 +VVV+NVWG WCGPCR+E LQ V D T GV LG++VRD NR A DF DR +TY Sbjct 75 KVVVLNVWGSWCGPCRSEADDLQAVQDKTAAQGVQLLGVNVRD-NRSAAVDFHRDRGLTY 133 Query 148 PSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAADLQPVVERVAEE 205 PSI+DP+ R+L+A +P S +P+T+VLDRQHRVAA+FL +LL DL P V+R+A E Sbjct 134 PSIFDPSGRSLLAL-KNFPRSTVPATIVLDRQHRVAAIFLTDLLEKDLLPEVQRIAAE 190 >gi|331699352|ref|YP_004335591.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Pseudonocardia dioxanivorans CB1190] gi|326954041|gb|AEA27738.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Pseudonocardia dioxanivorans CB1190] Length=197 Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 96/174 (56%), Positives = 122/174 (71%), Gaps = 2/174 (1%) Query 32 SGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPELADPARSVSLDDFPGQVVV 91 +G+DAV G F+FV+PGGKT I YDPP+SR + L+G L P V +D+ G+V+V Sbjct 23 TGKDAVETGQEFQFVAPGGKTTILYDPPSSRAKLPALTGDSLLRPGTDVGTEDYAGKVLV 82 Query 92 VNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQAPQDFINDRHVTYPSIY 151 VN+WG WCGPCRAE S L+ V D T+ GV+ LGIDVRD +R A DF+ DR +TY SI+ Sbjct 83 VNIWGSWCGPCRAEASDLEFVLDQTQAQGVALLGIDVRD-DRAAATDFVKDRGLTYESIF 141 Query 152 DPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAADLQPVVERVAEE 205 DP R L A G YP + +PST+VLDRQHRVAAV+L + +DL V+RVAEE Sbjct 142 DPPGRVLAALSG-YPRNTVPSTIVLDRQHRVAAVYLTTIRPSDLISQVQRVAEE 194 >gi|256380700|ref|YP_003104360.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Actinosynnema mirum DSM 43827] gi|255925003|gb|ACU40514.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Actinosynnema mirum DSM 43827] Length=195 Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 97/178 (55%), Positives = 129/178 (73%), Gaps = 3/178 (1%) Query 29 TGC-SGRDAVAQGGTFEFVSPGGKTDIFYDPPASRGRPGPLSGPELADPARSVSLDDFPG 87 +GC +G DAVA GG F+FV+PGG+ I YD P + G LSGP L + +++SLDD+ G Sbjct 20 SGCATGDDAVAVGGEFQFVAPGGQVRIRYDGPDRKPISG-LSGPSLMEDGKTISLDDYEG 78 Query 88 QVVVVNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQAPQDFINDRHVTY 147 +VVVVNVWG WC PCR E ++Q+V D GV LG+DVR+ + A +DF ++R +TY Sbjct 79 KVVVVNVWGAWCPPCRTEAPEMQKVQDEAGPKGVQVLGLDVRETSINAGRDFKSNRGLTY 138 Query 148 PSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELLAADLQPVVERVAEE 205 PSIYD + RTL+AF G YP + +PST+VLD+QHRVAAVFL L+A+DL P+VE +A E Sbjct 139 PSIYDDSGRTLLAFKG-YPPNAVPSTIVLDKQHRVAAVFLESLIASDLLPLVEELAAE 195 Lambda K H 0.320 0.136 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 260686263632 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40